Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:07:15 (645144): wrapper (7.7.26015): starting
00:07:15 (645144): wrapper: running run_atlas (--nthreads 8)
[2025-10-06 00:07:15] Arguments: --nthreads 8
[2025-10-06 00:07:15] Threads: 8
[2025-10-06 00:07:15] Checking for CVMFS
[2025-10-06 00:07:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 00:07:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 00:07:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 00:07:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 00:07:17] 2.13.2.0 2554489 120099 333532 151386 3 194 23144786 40960000 38878 16776704 0 289016502 99.735 204905467 22117 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-06 00:07:17] CVMFS is ok
[2025-10-06 00:07:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 00:07:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 00:07:17] Further information can be found at the LHC@home message board.
[2025-10-06 00:07:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 00:07:17] Checking for apptainer binary...
[2025-10-06 00:07:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 00:07:17] Running /usr/bin/apptainer --version
[2025-10-06 00:07:17] apptainer version 1.4.2-1.el9
[2025-10-06 00:07:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 00:07:17] c7-13-33.aglt2.org
[2025-10-06 00:07:17] apptainer works
[2025-10-06 00:07:17] Set ATHENA_PROC_NUMBER=8
[2025-10-06 00:07:17] Set ATHENA_CORE_NUMBER=8
[2025-10-06 00:07:17] Starting ATLAS job with PandaID=6829845875
[2025-10-06 00:07:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 03:49:24]  *** The last 200 lines of the pilot log: ***
[2025-10-06 03:49:24] 2025-10-06 07:48:37,723 | INFO     | sum of square deviations: 3124097108.3287067
[2025-10-06 03:49:24] 2025-10-06 07:48:37,775 | INFO     | sum of deviations: 32034309231.97682
[2025-10-06 03:49:24] 2025-10-06 07:48:37,775 | INFO     | mean x: 1759730291.6620371
[2025-10-06 03:49:24] 2025-10-06 07:48:37,775 | INFO     | mean y: 2316584.6435185187
[2025-10-06 03:49:24] 2025-10-06 07:48:37,775 | INFO     | -- intersect: -18041855018.6315
[2025-10-06 03:49:24] 2025-10-06 07:48:37,776 | INFO     | intersect: -18041855018.6315
[2025-10-06 03:49:24] 2025-10-06 07:48:37,776 | INFO     | chi2: 2.2613500273162295
[2025-10-06 03:49:24] 2025-10-06 07:48:37,776 | INFO     | sum of square deviations: 2912124833.1564126
[2025-10-06 03:49:24] 2025-10-06 07:48:37,777 | INFO     | sum of deviations: 43892011045.080574
[2025-10-06 03:49:24] 2025-10-06 07:48:37,777 | INFO     | mean x: 1759730139.1800947
[2025-10-06 03:49:24] 2025-10-06 07:48:37,777 | INFO     | mean y: 2324945.971563981
[2025-10-06 03:49:24] 2025-10-06 07:48:37,777 | INFO     | -- intersect: -26520609038.811142
[2025-10-06 03:49:24] 2025-10-06 07:48:37,777 | INFO     | intersect: -26520609038.811142
[2025-10-06 03:49:24] 2025-10-06 07:48:37,778 | INFO     | chi2: 1.5657299324429708
[2025-10-06 03:49:24] 2025-10-06 07:48:37,778 | INFO     | current chi2=1.5657299324429708 (change=30.761274746078154 %)
[2025-10-06 03:49:24] 2025-10-06 07:48:37,778 | INFO     | sum of square deviations: 2710018307.6698856
[2025-10-06 03:49:24] 2025-10-06 07:48:37,832 | INFO     | sum of deviations: 43063951106.5534
[2025-10-06 03:49:24] 2025-10-06 07:48:37,832 | INFO     | mean x: 1759729986.7184465
[2025-10-06 03:49:24] 2025-10-06 07:48:37,832 | INFO     | mean y: 2324318.854368932
[2025-10-06 03:49:24] 2025-10-06 07:48:37,833 | INFO     | -- intersect: -27960928141.213554
[2025-10-06 03:49:24] 2025-10-06 07:48:37,833 | INFO     | intersect: -27960928141.213554
[2025-10-06 03:49:24] 2025-10-06 07:48:37,834 | INFO     | chi2: 1.5649544822811483
[2025-10-06 03:49:24] 2025-10-06 07:48:37,834 | INFO     | current chi2=1.5649544822811483 (change=0.04952643145887483 %)
[2025-10-06 03:49:24] 2025-10-06 07:48:37,835 | INFO     | right removable region: 205
[2025-10-06 03:49:24] 2025-10-06 07:48:37,835 | INFO     | sum of square deviations: 2911932069.4028254
[2025-10-06 03:49:24] 2025-10-06 07:48:37,836 | INFO     | sum of deviations: -2376966464.630327
[2025-10-06 03:49:24] 2025-10-06 07:48:37,836 | INFO     | mean x: 1759730444.2132702
[2025-10-06 03:49:24] 2025-10-06 07:48:37,836 | INFO     | mean y: 2341113.7251184834
[2025-10-06 03:49:24] 2025-10-06 07:48:37,836 | INFO     | -- intersect: 1438782676.574412
[2025-10-06 03:49:24] 2025-10-06 07:48:37,836 | INFO     | intersect: 1438782676.574412
[2025-10-06 03:49:24] 2025-10-06 07:48:37,837 | INFO     | chi2: 0.7269919113114302
[2025-10-06 03:49:24] 2025-10-06 07:48:37,837 | INFO     | current chi2=0.7269919113114302 (change=67.85142049971697 %)
[2025-10-06 03:49:24] 2025-10-06 07:48:37,837 | INFO     | sum of square deviations: 2709645659.364079
[2025-10-06 03:49:24] 2025-10-06 07:48:37,870 | INFO     | sum of deviations: -4673130961.218451
[2025-10-06 03:49:24] 2025-10-06 07:48:37,870 | INFO     | mean x: 1759730596.7427185
[2025-10-06 03:49:24] 2025-10-06 07:48:37,871 | INFO     | mean y: 2342839.354368932
[2025-10-06 03:49:24] 2025-10-06 07:48:37,871 | INFO     | -- intersect: 3037223620.397807
[2025-10-06 03:49:24] 2025-10-06 07:48:37,871 | INFO     | intersect: 3037223620.397807
[2025-10-06 03:49:24] 2025-10-06 07:48:37,871 | INFO     | chi2: 0.7228219233817197
[2025-10-06 03:49:24] 2025-10-06 07:48:37,871 | INFO     | current chi2=0.7228219233817197 (change=0.5735948178829344 %)
[2025-10-06 03:49:24] 2025-10-06 07:48:37,871 | INFO     | left removable region: 20
[2025-10-06 03:49:24] 2025-10-06 07:48:37,871 | INFO     | sum of square deviations: 1962341205.5135128
[2025-10-06 03:49:24] 2025-10-06 07:48:37,872 | INFO     | sum of deviations: 4975681230.486488
[2025-10-06 03:49:24] 2025-10-06 07:48:37,872 | INFO     | mean x: 1759730566.3783784
[2025-10-06 03:49:24] 2025-10-06 07:48:37,873 | INFO     | mean y: 2354593.0216216217
[2025-10-06 03:49:24] 2025-10-06 07:48:37,873 | INFO     | -- intersect: -4459590315.051075
[2025-10-06 03:49:24] 2025-10-06 07:48:37,873 | INFO     | intersect: -4459590315.051075
[2025-10-06 03:49:24] 2025-10-06 07:48:37,873 | INFO     | chi2: 0.008846693922923582
[2025-10-06 03:49:24] 2025-10-06 07:48:37,873 | INFO     | -- intersect: -4459590315.051075
[2025-10-06 03:49:24] 2025-10-06 07:48:37,873 | INFO     | current memory leak: 2.54 B/s (using 185 data points, chi2=0.01)
[2025-10-06 03:49:24] 2025-10-06 07:48:37,874 | INFO     | could have reported an average CPU frequency of 3289 MHz (11 samples)
[2025-10-06 03:49:24] 2025-10-06 07:48:37,890 | INFO     | ..............................
[2025-10-06 03:49:24] 2025-10-06 07:48:37,890 | INFO     | . Timing measurements:
[2025-10-06 03:49:24] 2025-10-06 07:48:37,890 | INFO     | . get job = 0 s
[2025-10-06 03:49:24] 2025-10-06 07:48:37,890 | INFO     | . initial setup = 3 s
[2025-10-06 03:49:24] 2025-10-06 07:48:37,890 | INFO     | . payload setup = 20 s
[2025-10-06 03:49:24] 2025-10-06 07:48:37,890 | INFO     | . stage-in = 0 s
[2025-10-06 03:49:24] 2025-10-06 07:48:37,890 | INFO     | . payload execution = 13136 s
[2025-10-06 03:49:24] 2025-10-06 07:48:37,891 | INFO     | . stage-out = 9 s
[2025-10-06 03:49:24] 2025-10-06 07:48:37,891 | INFO     | . log creation = 0 s
[2025-10-06 03:49:24] 2025-10-06 07:48:37,891 | INFO     | ..............................
[2025-10-06 03:49:24] 2025-10-06 07:48:38,730 | INFO     | 
[2025-10-06 03:49:24] 2025-10-06 07:48:38,730 | INFO     | job summary report
[2025-10-06 03:49:24] 2025-10-06 07:48:38,730 | INFO     | --------------------------------------------------
[2025-10-06 03:49:24] 2025-10-06 07:48:38,730 | INFO     | PanDA job id: 6829845875
[2025-10-06 03:49:24] 2025-10-06 07:48:38,730 | INFO     | task id: 46376905
[2025-10-06 03:49:24] 2025-10-06 07:48:38,730 | INFO     | errors: (none)
[2025-10-06 03:49:24] 2025-10-06 07:48:38,730 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 03:49:24] 2025-10-06 07:48:38,731 | INFO     | pilot state: finished 
[2025-10-06 03:49:24] 2025-10-06 07:48:38,731 | INFO     | transexitcode: 0
[2025-10-06 03:49:24] 2025-10-06 07:48:38,731 | INFO     | exeerrorcode: 0
[2025-10-06 03:49:24] 2025-10-06 07:48:38,731 | INFO     | exeerrordiag: 
[2025-10-06 03:49:24] 2025-10-06 07:48:38,731 | INFO     | exitcode: 0
[2025-10-06 03:49:24] 2025-10-06 07:48:38,731 | INFO     | exitmsg: OK
[2025-10-06 03:49:24] 2025-10-06 07:48:38,731 | INFO     | cpuconsumptiontime: 29127 s
[2025-10-06 03:49:24] 2025-10-06 07:48:38,731 | INFO     | nevents: 400
[2025-10-06 03:49:24] 2025-10-06 07:48:38,731 | INFO     | neventsw: 0
[2025-10-06 03:49:24] 2025-10-06 07:48:38,731 | INFO     | pid: 671195
[2025-10-06 03:49:24] 2025-10-06 07:48:38,731 | INFO     | pgrp: 671195
[2025-10-06 03:49:24] 2025-10-06 07:48:38,731 | INFO     | corecount: 8
[2025-10-06 03:49:24] 2025-10-06 07:48:38,731 | INFO     | event service: False
[2025-10-06 03:49:24] 2025-10-06 07:48:38,731 | INFO     | sizes: {0: 2347982, 1: 2348667, 2: 2348866, 3: 2348866, 13: 2348894, 18: 2349212, 24: 2349368, 13161: 2379343, 13162: 2379342, 13172: 2388396, 13173: 2388452, 1322
[2025-10-06 03:49:24] 2025-10-06 07:48:38,783 | INFO     | --------------------------------------------------
[2025-10-06 03:49:24] 2025-10-06 07:48:38,783 | INFO     | 
[2025-10-06 03:49:24] 2025-10-06 07:48:38,783 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-06 03:49:24] 2025-10-06 07:48:39,007 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 03:49:24] 2025-10-06 07:48:39,008 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 03:49:24] 2025-10-06 07:48:39,008 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 03:49:24] 2025-10-06 07:48:39,008 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 03:49:24] 2025-10-06 07:48:39,008 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 03:49:24] 2025-10-06 07:48:39,008 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 03:49:24] 2025-10-06 07:48:39,008 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 03:49:24] 2025-10-06 07:48:39,008 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 03:49:24] 2025-10-06 07:48:39,008 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 03:49:24] 2025-10-06 07:48:39,008 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 03:49:24] 2025-10-06 07:48:39,008 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 03:49:24] 2025-10-06 07:48:39,009 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 03:49:24] 2025-10-06 07:48:39,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 03:49:24] 2025-10-06 07:48:39,036 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 03:49:24] 2025-10-06 07:48:39,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 03:49:24] 2025-10-06 07:48:39,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 03:49:24] 2025-10-06 07:48:39,036 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 03:49:24] 2025-10-06 07:48:39,037 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 03:49:24] 2025-10-06 07:48:39,037 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 03:49:24] 2025-10-06 07:48:39,037 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 03:49:24] 2025-10-06 07:48:39,037 | INFO     | job 6829845875 has completed (purged errors)
[2025-10-06 03:49:24] 2025-10-06 07:48:39,037 | INFO     | overall cleanup function is called
[2025-10-06 03:49:24] 2025-10-06 07:48:40,086 | INFO     | --- collectZombieJob: --- 10, [671195]
[2025-10-06 03:49:24] 2025-10-06 07:48:40,086 | INFO     | zombie collector waiting for pid 671195
[2025-10-06 03:49:24] 2025-10-06 07:48:40,086 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 03:49:24] 2025-10-06 07:48:40,090 | INFO     | collected zombie processes
[2025-10-06 03:49:24] 2025-10-06 07:48:40,090 | INFO     | will attempt to kill all subprocesses of pid=671195
[2025-10-06 03:49:24] 2025-10-06 07:48:42,241 | INFO     | PID=653368 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-06 03:49:24] 2025-10-06 07:48:42,242 | INFO     | .. there are 38 such processes running
[2025-10-06 03:49:24] 2025-10-06 07:48:43,217 | INFO     | process IDs to be killed: [671195] (in reverse order)
[2025-10-06 03:49:24] 2025-10-06 07:48:44,513 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 03:49:24] 2025-10-06 07:48:44,536 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 03:49:24] 2025-10-06 07:48:44,805 | INFO     | did not find any defunct processes belonging to 671195
[2025-10-06 03:49:24] 2025-10-06 07:48:44,823 | INFO     | did not find any defunct processes belonging to 671195
[2025-10-06 03:49:24] 2025-10-06 07:48:44,823 | INFO     | ready for new job
[2025-10-06 03:49:24] 2025-10-06 07:48:44,823 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 03:49:24] 2025-10-06 07:48:44,825 | INFO     | ***************************************
[2025-10-06 03:49:24] 2025-10-06 07:48:44,825 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 03:49:24] 2025-10-06 07:48:44,825 | INFO     | ***************************************
[2025-10-06 03:49:24] 2025-10-06 07:48:44,826 | INFO     | 
[2025-10-06 03:49:24] 2025-10-06 07:48:44,844 | INFO     | architecture information:
[2025-10-06 03:49:24] 2025-10-06 07:48:44,856 | INFO     | executing command: cat /etc/os-release
[2025-10-06 03:49:24] 2025-10-06 07:48:45,014 | INFO     | cat /etc/os-release:
[2025-10-06 03:49:24] NAME="CentOS Linux"
[2025-10-06 03:49:24] VERSION="7 (Core)"
[2025-10-06 03:49:24] ID="centos"
[2025-10-06 03:49:24] ID_LIKE="rhel fedora"
[2025-10-06 03:49:24] VERSION_ID="7"
[2025-10-06 03:49:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 03:49:24] ANSI_COLOR="0;31"
[2025-10-06 03:49:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 03:49:24] HOME_URL="https://www.centos.org/"
[2025-10-06 03:49:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 03:49:24] 
[2025-10-06 03:49:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 03:49:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 03:49:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 03:49:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 03:49:24] 
[2025-10-06 03:49:24] 2025-10-06 07:48:45,014 | INFO     | ***************************************
[2025-10-06 03:49:24] 2025-10-06 07:48:45,518 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-06 03:49:24] 2025-10-06 07:48:45,672 | INFO     | sufficient remaining disk space (82446385152 B)
[2025-10-06 03:49:24] 2025-10-06 07:48:45,673 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 03:49:24] 2025-10-06 07:48:45,673 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 03:49:24] 2025-10-06 07:48:45,673 | INFO     | update_server=False
[2025-10-06 03:49:24] 2025-10-06 07:48:45,673 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 03:49:24] 2025-10-06 07:48:45,673 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 03:49:24] 2025-10-06 07:48:45,763 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-06 03:49:24] 2025-10-06 07:48:45,763 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-06 03:49:24] 2025-10-06 07:48:45,763 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 03:49:24] 2025-10-06 07:48:45,763 | INFO     | will abort loop
[2025-10-06 03:49:24] 2025-10-06 07:48:45,853 | INFO     | all data control threads have been joined
[2025-10-06 03:49:24] 2025-10-06 07:48:46,499 | INFO     | all payload control threads have been joined
[2025-10-06 03:49:24] 2025-10-06 07:48:46,679 | INFO     | [job] retrieve thread has finished
[2025-10-06 03:49:24] 2025-10-06 07:48:46,769 | INFO     | [job] job monitor thread has finished
[2025-10-06 03:49:24] 2025-10-06 07:48:46,799 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 03:49:24] 2025-10-06 07:48:46,803 | INFO     | [job] validate thread has finished
[2025-10-06 03:49:24] 2025-10-06 07:48:46,861 | INFO     | [data] control thread has finished
[2025-10-06 03:49:24] 2025-10-06 07:48:47,163 | INFO     | [payload] validate_post thread has finished
[2025-10-06 03:49:24] 2025-10-06 07:48:47,194 | INFO     | [payload] failed_post thread has finished
[2025-10-06 03:49:24] 2025-10-06 07:48:47,380 | INFO     | [data] copytool_in thread has finished
[2025-10-06 03:49:24] 2025-10-06 07:48:47,395 | INFO     | all job control threads have been joined
[2025-10-06 03:49:24] 2025-10-06 07:48:47,456 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 03:49:24] 2025-10-06 07:48:47,505 | INFO     | [payload] control thread has finished
[2025-10-06 03:49:24] 2025-10-06 07:48:47,680 | INFO     | [data] copytool_out thread has finished
[2025-10-06 03:49:24] 2025-10-06 07:48:47,810 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 03:49:24] 2025-10-06 07:48:47,989 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 03:49:24] 2025-10-06 07:48:48,043 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 03:49:24] 2025-10-06 07:48:48,043 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 03:49:24] 2025-10-06 07:48:48,401 | INFO     | [job] control thread has finished
[2025-10-06 03:49:24] 2025-10-06 07:48:48,818 | INFO     | [job] queue monitor thread has finished
[2025-10-06 03:49:24] 2025-10-06 07:48:52,001 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 03:49:24] 2025-10-06 07:49:07,601 | INFO     | [monitor] cgroup control has ended
[2025-10-06 03:49:24] 2025-10-06 07:49:08,409 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140258554664768)>', '<ExcThread(monitor, started 140257743836928)>']
[2025-10-06 03:49:24] 2025-10-06 07:49:13,435 | INFO     | all workflow threads have been joined
[2025-10-06 03:49:24] 2025-10-06 07:49:13,435 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 03:49:24] 2025-10-06 07:49:13,435 | INFO     | traces error code: 0
[2025-10-06 03:49:24] 2025-10-06 07:49:13,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 03:49:24] 2025-10-06 07:49:19,905 | INFO     | PID=653368 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-06 03:49:24] 2025-10-06 07:49:19,906 | INFO     | .. there are 38 such processes running
[2025-10-06 03:49:24] 2025-10-06 07:49:19,906 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 03:49:24] 2025-10-06 07:49:19,906 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 03:49:24] 2025-10-06 07:49:19,906 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 03:49:24] 2025-10-06 07:49:19,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 03:49:24] 2025-10-06 07:49:19,907 | INFO     | [monitor] control thread has ended
[2025-10-06 03:49:24] 2025-10-06 07:49:22,315 [wrapper] ==== pilot stdout END ====
[2025-10-06 03:49:24] 2025-10-06 07:49:22,319 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 03:49:24] 2025-10-06 07:49:22,376 [wrapper] pilotpid: 653368
[2025-10-06 03:49:24] 2025-10-06 07:49:22,413 [wrapper] Pilot exit status: 0
[2025-10-06 03:49:24] 2025-10-06 07:49:22,724 [wrapper] pandaids: 6829845875
[2025-10-06 03:49:24] 2025-10-06 07:49:23,053 [wrapper] cleanup supervisor_pilot 1626750 653369
[2025-10-06 03:49:24] 2025-10-06 07:49:23,084 [wrapper] Test setup, not cleaning
[2025-10-06 03:49:24] 2025-10-06 07:49:23,105 [wrapper] apfmon messages muted
[2025-10-06 03:49:24] 2025-10-06 07:49:23,134 [wrapper] ==== wrapper stdout END ====
[2025-10-06 03:49:24] 2025-10-06 07:49:23,151 [wrapper] ==== wrapper stderr END ====
[2025-10-06 03:49:24]  *** Error codes and diagnostics ***
[2025-10-06 03:49:24]     "exeErrorCode": 0,
[2025-10-06 03:49:24]     "exeErrorDiag": "",
[2025-10-06 03:49:24]     "pilotErrorCode": 0,
[2025-10-06 03:49:24]     "pilotErrorDiag": "",
[2025-10-06 03:49:24]  *** Listing of results directory ***
[2025-10-06 03:49:24] total 385788
[2025-10-06 03:49:24] -rw-r--r--. 1 boincer umatlas    552446 Oct  4 11:36 pilot3.tar.gz
[2025-10-06 03:49:24] -rw-r--r--. 1 boincer umatlas      5112 Oct  4 11:38 queuedata.json
[2025-10-06 03:49:24] -rwx------. 1 boincer umatlas     36292 Oct  4 11:38 runpilot2-wrapper.sh
[2025-10-06 03:49:24] -rw-r--r--. 1 boincer umatlas       100 Oct  6 00:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 03:49:24] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  6 00:07 run_atlas
[2025-10-06 03:49:24] -rw-r--r--. 1 boincer umatlas       105 Oct  6 00:07 job.xml
[2025-10-06 03:49:24] -rw-r--r--. 2 boincer umatlas 214101351 Oct  6 00:07 EVNT.46376901._002253.pool.root.1
[2025-10-06 03:49:24] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 00:07 start_atlas.sh
[2025-10-06 03:49:24] drwxrwx--x. 2 boincer umatlas      4096 Oct  6 00:07 shared
[2025-10-06 03:49:24] -rw-r--r--. 2 boincer umatlas    565601 Oct  6 00:07 input.tar.gz
[2025-10-06 03:49:24] -rw-r--r--. 1 boincer umatlas         0 Oct  6 00:07 boinc_lockfile
[2025-10-06 03:49:24] -rw-r--r--. 1 boincer umatlas      2516 Oct  6 00:07 pandaJob.out
[2025-10-06 03:49:24] -rw-------. 1 boincer umatlas    974168 Oct  6 00:07 agis_schedconf.cvmfs.json
[2025-10-06 03:49:24] drwx------. 4 boincer umatlas      4096 Oct  6 00:07 pilot3
[2025-10-06 03:49:24] -rw-------. 1 boincer umatlas 173174284 Oct  6 03:46 HITS.46376905._062401.pool.root.1
[2025-10-06 03:49:24] -rw-r--r--. 1 boincer umatlas       531 Oct  6 03:46 boinc_task_state.xml
[2025-10-06 03:49:24] -rw-------. 1 boincer umatlas      1046 Oct  6 03:47 memory_monitor_summary.json
[2025-10-06 03:49:24] -rw-------. 1 boincer umatlas   1560401 Oct  6 03:47 agis_ddmendpoints.agis.ALL.json
[2025-10-06 03:49:24] -rw-------. 1 boincer umatlas    414494 Oct  6 03:47 log.46376905._062401.job.log.tgz.1
[2025-10-06 03:49:24] -rw-------. 1 boincer umatlas      7798 Oct  6 03:48 heartbeat.json
[2025-10-06 03:49:24] -rw-r--r--. 1 boincer umatlas      6898 Oct  6 03:48 init_data.xml
[2025-10-06 03:49:24] -rw-------. 1 boincer umatlas        95 Oct  6 03:48 pilot_heartbeat.json
[2025-10-06 03:49:24] -rw-------. 1 boincer umatlas       822 Oct  6 03:49 pilotlog.txt
[2025-10-06 03:49:24] -rw-------. 1 boincer umatlas   1534407 Oct  6 03:49 log.46376905._062401.job.log.1
[2025-10-06 03:49:24] -rw-------. 1 boincer umatlas       357 Oct  6 03:49 output.list
[2025-10-06 03:49:24] -rw-r--r--. 1 boincer umatlas      8192 Oct  6 03:49 boinc_mmap_file
[2025-10-06 03:49:24] -rw-r--r--. 1 boincer umatlas       620 Oct  6 03:49 runtime_log
[2025-10-06 03:49:24] -rw-------. 1 boincer umatlas   1966080 Oct  6 03:49 result.tar.gz
[2025-10-06 03:49:24] -rw-r--r--. 1 boincer umatlas        28 Oct  6 03:49 wrapper_checkpoint.txt
[2025-10-06 03:49:24] -rw-r--r--. 1 boincer umatlas      8704 Oct  6 03:49 runtime_log.err
[2025-10-06 03:49:24] -rw-------. 1 boincer umatlas       659 Oct  6 03:49 0oDODmgWJP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfqLNDm2uzABn.diag
[2025-10-06 03:49:24] -rw-r--r--. 1 boincer umatlas     21191 Oct  6 03:49 stderr.txt
[2025-10-06 03:49:24] HITS file was successfully produced:
[2025-10-06 03:49:24] -rw-------. 1 boincer umatlas 173174284 Oct  6 03:46 shared/HITS.pool.root.1
[2025-10-06 03:49:24]  *** Contents of shared directory: ***
[2025-10-06 03:49:24] total 380696
[2025-10-06 03:49:24] -rw-r--r--. 2 boincer umatlas 214101351 Oct  6 00:07 ATLAS.root_0
[2025-10-06 03:49:24] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 00:07 start_atlas.sh
[2025-10-06 03:49:24] -rw-r--r--. 2 boincer umatlas    565601 Oct  6 00:07 input.tar.gz
[2025-10-06 03:49:24] -rw-------. 1 boincer umatlas 173174284 Oct  6 03:46 HITS.pool.root.1
[2025-10-06 03:49:24] -rw-------. 1 boincer umatlas   1966080 Oct  6 03:49 result.tar.gz
03:49:26 (645144): run_atlas exited; CPU time 29390.330079
03:49:26 (645144): called boinc_finish(0)

</stderr_txt>
]]>

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