Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:31 (89938): wrapper (7.7.26015): starting
00:03:31 (89938): wrapper: running run_atlas (--nthreads 8)
[2025-10-06 00:03:31] Arguments: --nthreads 8
[2025-10-06 00:03:31] Threads: 8
[2025-10-06 00:03:31] Checking for CVMFS
[2025-10-06 00:03:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 00:03:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 00:03:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 00:03:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 00:03:33] 2.13.2.0 317867 128853 610636 151385 2 654 39310649 40960001 79688 16776704 0 333947312 99.823 145841200 31616 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-06 00:03:33] CVMFS is ok
[2025-10-06 00:03:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 00:03:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 00:03:33] Further information can be found at the LHC@home message board.
[2025-10-06 00:03:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 00:03:33] Checking for apptainer binary...
[2025-10-06 00:03:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 00:03:33] Running /usr/bin/apptainer --version
[2025-10-06 00:03:33] apptainer version 1.4.2-1.el9
[2025-10-06 00:03:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 00:03:34] c8-6-11.aglt2.org
[2025-10-06 00:03:34] apptainer works
[2025-10-06 00:03:34] Set ATHENA_PROC_NUMBER=8
[2025-10-06 00:03:34] Set ATHENA_CORE_NUMBER=8
[2025-10-06 00:03:34] Starting ATLAS job with PandaID=6832048432
[2025-10-06 00:03:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 03:14:36]  *** The last 200 lines of the pilot log: ***
[2025-10-06 03:14:36] 2025-10-06 07:13:45,041 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 03:14:36] 2025-10-06 07:13:45,041 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 03:14:36] 2025-10-06 07:13:45,043 | INFO     | fitting pss+swap vs Time
[2025-10-06 03:14:36] 2025-10-06 07:13:45,043 | INFO     | sum of square deviations: 1838685847.8121595
[2025-10-06 03:14:36] 2025-10-06 07:13:45,057 | INFO     | sum of deviations: 66685467656.883965
[2025-10-06 03:14:36] 2025-10-06 07:13:45,057 | INFO     | mean x: 1759729267.2486188
[2025-10-06 03:14:36] 2025-10-06 07:13:45,057 | INFO     | mean y: 2382359.5359116024
[2025-10-06 03:14:36] 2025-10-06 07:13:45,057 | INFO     | -- intersect: -63819487632.889366
[2025-10-06 03:14:36] 2025-10-06 07:13:45,057 | INFO     | intersect: -63819487632.889366
[2025-10-06 03:14:36] 2025-10-06 07:13:45,057 | INFO     | chi2: 4.971359543529933
[2025-10-06 03:14:36] 2025-10-06 07:13:45,058 | INFO     | sum of square deviations: 1690481345.0
[2025-10-06 03:14:36] 2025-10-06 07:13:45,058 | INFO     | sum of deviations: 76430710747.5
[2025-10-06 03:14:36] 2025-10-06 07:13:45,058 | INFO     | mean x: 1759729114.75
[2025-10-06 03:14:36] 2025-10-06 07:13:45,058 | INFO     | mean y: 2392112.602272727
[2025-10-06 03:14:36] 2025-10-06 07:13:45,058 | INFO     | -- intersect: -79559176171.61412
[2025-10-06 03:14:36] 2025-10-06 07:13:45,058 | INFO     | intersect: -79559176171.61412
[2025-10-06 03:14:36] 2025-10-06 07:13:45,059 | INFO     | chi2: 4.218164913298166
[2025-10-06 03:14:36] 2025-10-06 07:13:45,059 | INFO     | current chi2=4.218164913298166 (change=15.150677066035707 %)
[2025-10-06 03:14:36] 2025-10-06 07:13:45,059 | INFO     | right removable region: 175
[2025-10-06 03:14:36] 2025-10-06 07:13:45,059 | INFO     | sum of square deviations: 1690464692.4943218
[2025-10-06 03:14:36] 2025-10-06 07:13:45,059 | INFO     | sum of deviations: 11195530643.318182
[2025-10-06 03:14:36] 2025-10-06 07:13:45,059 | INFO     | mean x: 1759729419.7556818
[2025-10-06 03:14:36] 2025-10-06 07:13:45,060 | INFO     | mean y: 2439335.6818181816
[2025-10-06 03:14:36] 2025-10-06 07:13:45,060 | INFO     | -- intersect: -11651814509.604828
[2025-10-06 03:14:36] 2025-10-06 07:13:45,060 | INFO     | intersect: -11651814509.604828
[2025-10-06 03:14:36] 2025-10-06 07:13:45,060 | INFO     | chi2: 1.1139433878895113
[2025-10-06 03:14:36] 2025-10-06 07:13:45,060 | INFO     | current chi2=1.1139433878895113 (change=77.59278164985524 %)
[2025-10-06 03:14:36] 2025-10-06 07:13:45,060 | INFO     | sum of square deviations: 1550440228.678358
[2025-10-06 03:14:36] 2025-10-06 07:13:45,079 | INFO     | sum of deviations: -3765421140.3859653
[2025-10-06 03:14:36] 2025-10-06 07:13:45,079 | INFO     | mean x: 1759729572.25731
[2025-10-06 03:14:36] 2025-10-06 07:13:45,079 | INFO     | mean y: 2455536.50877193
[2025-10-06 03:14:36] 2025-10-06 07:13:45,079 | INFO     | -- intersect: 4276159746.5629277
[2025-10-06 03:14:36] 2025-10-06 07:13:45,079 | INFO     | intersect: 4276159746.5629277
[2025-10-06 03:14:36] 2025-10-06 07:13:45,079 | INFO     | chi2: 0.8326474745665841
[2025-10-06 03:14:36] 2025-10-06 07:13:45,079 | INFO     | current chi2=0.8326474745665841 (change=25.252262940926773 %)
[2025-10-06 03:14:36] 2025-10-06 07:13:45,079 | INFO     | sum of square deviations: 1418359215.8373551
[2025-10-06 03:14:36] 2025-10-06 07:13:45,080 | INFO     | sum of deviations: -7087587309.204819
[2025-10-06 03:14:36] 2025-10-06 07:13:45,080 | INFO     | mean x: 1759729724.7650602
[2025-10-06 03:14:36] 2025-10-06 07:13:45,080 | INFO     | mean y: 2459327.481927711
[2025-10-06 03:14:36] 2025-10-06 07:13:45,080 | INFO     | -- intersect: 8795886215.121325
[2025-10-06 03:14:36] 2025-10-06 07:13:45,080 | INFO     | intersect: 8795886215.121325
[2025-10-06 03:14:36] 2025-10-06 07:13:45,080 | INFO     | chi2: 0.8107841300416747
[2025-10-06 03:14:36] 2025-10-06 07:13:45,080 | INFO     | current chi2=0.8107841300416747 (change=2.6257624256039227 %)
[2025-10-06 03:14:36] 2025-10-06 07:13:45,080 | INFO     | left removable region: 30
[2025-10-06 03:14:36] 2025-10-06 07:13:45,080 | INFO     | sum of square deviations: 945268253.406895
[2025-10-06 03:14:36] 2025-10-06 07:13:45,081 | INFO     | sum of deviations: 1375481225.2965515
[2025-10-06 03:14:36] 2025-10-06 07:13:45,081 | INFO     | mean x: 1759729999.2827587
[2025-10-06 03:14:36] 2025-10-06 07:13:45,081 | INFO     | mean y: 2475654.3586206897
[2025-10-06 03:14:36] 2025-10-06 07:13:45,081 | INFO     | -- intersect: -2558147287.2040257
[2025-10-06 03:14:36] 2025-10-06 07:13:45,081 | INFO     | intersect: -2558147287.2040257
[2025-10-06 03:14:36] 2025-10-06 07:13:45,081 | INFO     | chi2: 0.0004687494194827694
[2025-10-06 03:14:36] 2025-10-06 07:13:45,081 | INFO     | -- intersect: -2558147287.2040257
[2025-10-06 03:14:36] 2025-10-06 07:13:45,081 | INFO     | current memory leak: 1.46 B/s (using 145 data points, chi2=0.00)
[2025-10-06 03:14:36] 2025-10-06 07:13:45,082 | INFO     | could have reported an average CPU frequency of 3799 MHz (10 samples)
[2025-10-06 03:14:36] 2025-10-06 07:13:45,082 | INFO     | ..............................
[2025-10-06 03:14:36] 2025-10-06 07:13:45,082 | INFO     | . Timing measurements:
[2025-10-06 03:14:36] 2025-10-06 07:13:45,082 | INFO     | . get job = 0 s
[2025-10-06 03:14:36] 2025-10-06 07:13:45,082 | INFO     | . initial setup = 4 s
[2025-10-06 03:14:36] 2025-10-06 07:13:45,082 | INFO     | . payload setup = 85 s
[2025-10-06 03:14:36] 2025-10-06 07:13:45,082 | INFO     | . stage-in = 0 s
[2025-10-06 03:14:36] 2025-10-06 07:13:45,082 | INFO     | . payload execution = 11056 s
[2025-10-06 03:14:36] 2025-10-06 07:13:45,082 | INFO     | . stage-out = 4 s
[2025-10-06 03:14:36] 2025-10-06 07:13:45,082 | INFO     | . log creation = 0 s
[2025-10-06 03:14:36] 2025-10-06 07:13:45,082 | INFO     | ..............................
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | 
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | job summary report
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | --------------------------------------------------
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | PanDA job id: 6832048432
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | task id: 46376905
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | errors: (none)
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | pilot state: finished 
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | transexitcode: 0
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | exeerrorcode: 0
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | exeerrordiag: 
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | exitcode: 0
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | exitmsg: OK
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | cpuconsumptiontime: 21015 s
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | nevents: 400
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | neventsw: 0
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | pid: 180637
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | pgrp: 180637
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | corecount: 8
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | event service: False
[2025-10-06 03:14:36] 2025-10-06 07:13:45,409 | INFO     | sizes: {0: 2347988, 1: 2348674, 2: 2348873, 12: 2348873, 23: 2348901, 34: 2348929, 45: 2349085, 49: 2349375, 56: 2349403, 11145: 2378436, 11151: 2387436, 11155: 23
[2025-10-06 03:14:36] 2025-10-06 07:13:45,410 | INFO     | --------------------------------------------------
[2025-10-06 03:14:36] 2025-10-06 07:13:45,410 | INFO     | 
[2025-10-06 03:14:36] 2025-10-06 07:13:45,410 | INFO     | executing command: ls -lF /tmp/boinchome/slots/12
[2025-10-06 03:14:36] 2025-10-06 07:13:45,439 | INFO     | time since job start (11325s) is within the limit (172800.0s)
[2025-10-06 03:14:36] 2025-10-06 07:13:45,638 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 03:14:36] 2025-10-06 07:13:45,638 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 03:14:36] 2025-10-06 07:13:45,638 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 03:14:36] 2025-10-06 07:13:45,638 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 03:14:36] 2025-10-06 07:13:45,638 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 03:14:36] 2025-10-06 07:13:45,638 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 03:14:36] 2025-10-06 07:13:45,638 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 03:14:36] 2025-10-06 07:13:45,638 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 03:14:36] 2025-10-06 07:13:45,638 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 03:14:36] 2025-10-06 07:13:45,638 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 03:14:36] 2025-10-06 07:13:45,638 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 03:14:36] 2025-10-06 07:13:45,638 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 03:14:36] 2025-10-06 07:13:45,638 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 03:14:36] 2025-10-06 07:13:45,638 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 03:14:36] 2025-10-06 07:13:45,639 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 03:14:36] 2025-10-06 07:13:45,639 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 03:14:36] 2025-10-06 07:13:45,639 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 03:14:36] 2025-10-06 07:13:45,639 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 03:14:36] 2025-10-06 07:13:45,639 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 03:14:36] 2025-10-06 07:13:45,639 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 03:14:36] 2025-10-06 07:13:45,639 | INFO     | job 6832048432 has completed (purged errors)
[2025-10-06 03:14:36] 2025-10-06 07:13:45,639 | INFO     | overall cleanup function is called
[2025-10-06 03:14:36] 2025-10-06 07:13:46,647 | INFO     | --- collectZombieJob: --- 10, [180637]
[2025-10-06 03:14:36] 2025-10-06 07:13:46,647 | INFO     | zombie collector waiting for pid 180637
[2025-10-06 03:14:36] 2025-10-06 07:13:46,647 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 03:14:36] 2025-10-06 07:13:46,647 | INFO     | collected zombie processes
[2025-10-06 03:14:36] 2025-10-06 07:13:46,647 | INFO     | will attempt to kill all subprocesses of pid=180637
[2025-10-06 03:14:36] 2025-10-06 07:13:49,003 | INFO     | process IDs to be killed: [180637] (in reverse order)
[2025-10-06 03:14:36] 2025-10-06 07:13:49,759 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 03:14:36] 2025-10-06 07:13:49,760 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 03:14:36] 2025-10-06 07:13:49,845 | INFO     | did not find any defunct processes belonging to 180637
[2025-10-06 03:14:36] 2025-10-06 07:13:49,876 | INFO     | did not find any defunct processes belonging to 180637
[2025-10-06 03:14:36] 2025-10-06 07:13:49,876 | INFO     | ready for new job
[2025-10-06 03:14:36] 2025-10-06 07:13:49,877 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 03:14:36] 2025-10-06 07:13:49,878 | INFO     | ***************************************
[2025-10-06 03:14:36] 2025-10-06 07:13:49,878 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 03:14:36] 2025-10-06 07:13:49,878 | INFO     | ***************************************
[2025-10-06 03:14:36] 2025-10-06 07:13:49,878 | INFO     | 
[2025-10-06 03:14:36] 2025-10-06 07:13:49,883 | INFO     | architecture information:
[2025-10-06 03:14:36] 2025-10-06 07:13:49,883 | INFO     | executing command: cat /etc/os-release
[2025-10-06 03:14:36] 2025-10-06 07:13:49,931 | INFO     | cat /etc/os-release:
[2025-10-06 03:14:36] NAME="CentOS Linux"
[2025-10-06 03:14:36] VERSION="7 (Core)"
[2025-10-06 03:14:36] ID="centos"
[2025-10-06 03:14:36] ID_LIKE="rhel fedora"
[2025-10-06 03:14:36] VERSION_ID="7"
[2025-10-06 03:14:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 03:14:36] ANSI_COLOR="0;31"
[2025-10-06 03:14:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 03:14:36] HOME_URL="https://www.centos.org/"
[2025-10-06 03:14:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 03:14:36] 
[2025-10-06 03:14:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 03:14:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 03:14:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 03:14:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 03:14:36] 
[2025-10-06 03:14:36] 2025-10-06 07:13:49,941 | INFO     | ***************************************
[2025-10-06 03:14:36] 2025-10-06 07:13:50,444 | INFO     | executing command: df -mP /tmp/boinchome/slots/12
[2025-10-06 03:14:36] 2025-10-06 07:13:50,500 | INFO     | sufficient remaining disk space (170150330368 B)
[2025-10-06 03:14:36] 2025-10-06 07:13:50,500 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 03:14:36] 2025-10-06 07:13:50,500 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 03:14:36] 2025-10-06 07:13:50,500 | INFO     | update_server=False
[2025-10-06 03:14:36] 2025-10-06 07:13:50,500 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 03:14:36] 2025-10-06 07:13:50,501 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 03:14:36] 2025-10-06 07:13:50,650 | INFO     | all data control threads have been joined
[2025-10-06 03:14:36] 2025-10-06 07:13:50,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 03:14:36] 2025-10-06 07:13:50,824 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 03:14:36] 2025-10-06 07:13:50,824 | INFO     | aborting loop
[2025-10-06 03:14:36] 2025-10-06 07:13:51,337 | INFO     | all job control threads have been joined
[2025-10-06 03:14:36] 2025-10-06 07:13:51,400 | INFO     | all payload control threads have been joined
[2025-10-06 03:14:36] 2025-10-06 07:13:51,506 | INFO     | [job] queue monitor thread has finished
[2025-10-06 03:14:36] 2025-10-06 07:13:51,516 | INFO     | [job] retrieve thread has finished
[2025-10-06 03:14:36] 2025-10-06 07:13:51,656 | INFO     | [data] control thread has finished
[2025-10-06 03:14:36] 2025-10-06 07:13:51,805 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 03:14:36] 2025-10-06 07:13:51,825 | INFO     | [data] copytool_in thread has finished
[2025-10-06 03:14:36] 2025-10-06 07:13:51,830 | INFO     | [job] job monitor thread has finished
[2025-10-06 03:14:36] 2025-10-06 07:13:51,916 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 03:14:36] 2025-10-06 07:13:52,072 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 03:14:36] 2025-10-06 07:13:52,343 | INFO     | [job] control thread has finished
[2025-10-06 03:14:36] 2025-10-06 07:13:52,348 | INFO     | [payload] failed_post thread has finished
[2025-10-06 03:14:36] 2025-10-06 07:13:52,348 | INFO     | [payload] validate_post thread has finished
[2025-10-06 03:14:36] 2025-10-06 07:13:52,407 | INFO     | [payload] control thread has finished
[2025-10-06 03:14:36] 2025-10-06 07:13:52,458 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 03:14:36] 2025-10-06 07:13:52,745 | INFO     | [data] copytool_out thread has finished
[2025-10-06 03:14:36] 2025-10-06 07:13:52,790 | INFO     | [job] validate thread has finished
[2025-10-06 03:14:36] 2025-10-06 07:13:52,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 03:14:36] 2025-10-06 07:13:56,871 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 03:14:36] 2025-10-06 07:14:19,703 | INFO     | PID=112523 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-06 03:14:36] 2025-10-06 07:14:19,703 | INFO     | .. there are 74 such processes running
[2025-10-06 03:14:36] 2025-10-06 07:14:19,703 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 03:14:36] 2025-10-06 07:14:19,703 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 03:14:36] 2025-10-06 07:14:19,703 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 03:14:36] 2025-10-06 07:14:21,173 | INFO     | [monitor] cgroup control has ended
[2025-10-06 03:14:36] 2025-10-06 07:14:23,378 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139960704894784)>', '<ExcThread(monitor, started 139960199919360)>']
[2025-10-06 03:14:36] 2025-10-06 07:14:24,280 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 03:14:36] 2025-10-06 07:14:24,280 | INFO     | [monitor] control thread has ended
[2025-10-06 03:14:36] 2025-10-06 07:14:28,403 | INFO     | all workflow threads have been joined
[2025-10-06 03:14:36] 2025-10-06 07:14:28,403 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 03:14:36] 2025-10-06 07:14:28,403 | INFO     | traces error code: 0
[2025-10-06 03:14:36] 2025-10-06 07:14:28,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 03:14:36] 2025-10-06 07:14:31,305 [wrapper] ==== pilot stdout END ====
[2025-10-06 03:14:36] 2025-10-06 07:14:31,308 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 03:14:36] 2025-10-06 07:14:31,310 [wrapper] pilotpid: 112523
[2025-10-06 03:14:36] 2025-10-06 07:14:31,312 [wrapper] Pilot exit status: 0
[2025-10-06 03:14:36] 2025-10-06 07:14:32,788 [wrapper] pandaids: 6832048432
[2025-10-06 03:14:36] 2025-10-06 07:14:32,953 [wrapper] cleanup supervisor_pilot 1573102 112524
[2025-10-06 03:14:36] 2025-10-06 07:14:32,958 [wrapper] Test setup, not cleaning
[2025-10-06 03:14:36] 2025-10-06 07:14:32,960 [wrapper] apfmon messages muted
[2025-10-06 03:14:36] 2025-10-06 07:14:32,962 [wrapper] ==== wrapper stdout END ====
[2025-10-06 03:14:36] 2025-10-06 07:14:32,963 [wrapper] ==== wrapper stderr END ====
[2025-10-06 03:14:36]  *** Error codes and diagnostics ***
[2025-10-06 03:14:36]     "exeErrorCode": 0,
[2025-10-06 03:14:36]     "exeErrorDiag": "",
[2025-10-06 03:14:36]     "pilotErrorCode": 0,
[2025-10-06 03:14:36]     "pilotErrorDiag": "",
[2025-10-06 03:14:36]  *** Listing of results directory ***
[2025-10-06 03:14:36] total 386684
[2025-10-06 03:14:36] -rw-r--r--. 1 boincer umatlas    552446 Oct  5 18:14 pilot3.tar.gz
[2025-10-06 03:14:36] -rwx------. 1 boincer umatlas     36292 Oct  5 18:18 runpilot2-wrapper.sh
[2025-10-06 03:14:36] -rw-r--r--. 1 boincer umatlas      5112 Oct  5 18:18 queuedata.json
[2025-10-06 03:14:36] -rw-r--r--. 1 boincer umatlas       100 Oct  6 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 03:14:36] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  6 00:03 run_atlas
[2025-10-06 03:14:36] -rw-r--r--. 1 boincer umatlas       105 Oct  6 00:03 job.xml
[2025-10-06 03:14:36] -rw-r--r--. 2 boincer umatlas 214018986 Oct  6 00:03 EVNT.46376901._003611.pool.root.1
[2025-10-06 03:14:36] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 00:03 start_atlas.sh
[2025-10-06 03:14:36] drwxrwx--x. 2 boincer umatlas      4096 Oct  6 00:03 shared
[2025-10-06 03:14:36] -rw-r--r--. 2 boincer umatlas    565602 Oct  6 00:03 input.tar.gz
[2025-10-06 03:14:36] -rw-r--r--. 1 boincer umatlas         0 Oct  6 00:03 boinc_lockfile
[2025-10-06 03:14:36] -rw-r--r--. 1 boincer umatlas      2519 Oct  6 00:03 pandaJob.out
[2025-10-06 03:14:36] -rw-------. 1 boincer umatlas    974168 Oct  6 00:04 agis_schedconf.cvmfs.json
[2025-10-06 03:14:36] drwx------. 4 boincer umatlas      4096 Oct  6 00:05 pilot3
[2025-10-06 03:14:36] -rw-r--r--. 1 boincer umatlas      7165 Oct  6 03:11 init_data.xml
[2025-10-06 03:14:36] -rw-------. 1 boincer umatlas 174645108 Oct  6 03:12 HITS.46376905._097820.pool.root.1
[2025-10-06 03:14:36] -rw-r--r--. 1 boincer umatlas       531 Oct  6 03:12 boinc_task_state.xml
[2025-10-06 03:14:36] -rw-------. 1 boincer umatlas      1049 Oct  6 03:12 memory_monitor_summary.json
[2025-10-06 03:14:36] -rw-------. 1 boincer umatlas   1560401 Oct  6 03:13 agis_ddmendpoints.agis.ALL.json
[2025-10-06 03:14:36] -rw-------. 1 boincer umatlas    412857 Oct  6 03:13 log.46376905._097820.job.log.tgz.1
[2025-10-06 03:14:36] -rw-------. 1 boincer umatlas        95 Oct  6 03:13 pilot_heartbeat.json
[2025-10-06 03:14:36] -rw-------. 1 boincer umatlas      7809 Oct  6 03:13 heartbeat.json
[2025-10-06 03:14:36] -rw-------. 1 boincer umatlas      4825 Oct  6 03:14 pilotlog.txt
[2025-10-06 03:14:36] -rw-r--r--. 1 boincer umatlas        27 Oct  6 03:14 wrapper_checkpoint.txt
[2025-10-06 03:14:36] -rw-r--r--. 1 boincer umatlas      8192 Oct  6 03:14 boinc_mmap_file
[2025-10-06 03:14:36] -rw-------. 1 boincer umatlas   1297372 Oct  6 03:14 log.46376905._097820.job.log.1
[2025-10-06 03:14:36] -rw-------. 1 boincer umatlas       357 Oct  6 03:14 output.list
[2025-10-06 03:14:36] -rw-r--r--. 1 boincer umatlas       620 Oct  6 03:14 runtime_log
[2025-10-06 03:14:36] -rw-------. 1 boincer umatlas   1730560 Oct  6 03:14 result.tar.gz
[2025-10-06 03:14:36] -rw-r--r--. 1 boincer umatlas      8713 Oct  6 03:14 runtime_log.err
[2025-10-06 03:14:36] -rw-------. 1 boincer umatlas       659 Oct  6 03:14 JL8MDmeEmP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmViHMDmAFcPSo.diag
[2025-10-06 03:14:36] -rw-r--r--. 1 boincer umatlas     21035 Oct  6 03:14 stderr.txt
[2025-10-06 03:14:36] HITS file was successfully produced:
[2025-10-06 03:14:36] -rw-------. 1 boincer umatlas 174645108 Oct  6 03:12 shared/HITS.pool.root.1
[2025-10-06 03:14:36]  *** Contents of shared directory: ***
[2025-10-06 03:14:36] total 381824
[2025-10-06 03:14:36] -rw-r--r--. 2 boincer umatlas 214018986 Oct  6 00:03 ATLAS.root_0
[2025-10-06 03:14:36] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 00:03 start_atlas.sh
[2025-10-06 03:14:36] -rw-r--r--. 2 boincer umatlas    565602 Oct  6 00:03 input.tar.gz
[2025-10-06 03:14:36] -rw-------. 1 boincer umatlas 174645108 Oct  6 03:12 HITS.pool.root.1
[2025-10-06 03:14:36] -rw-------. 1 boincer umatlas   1730560 Oct  6 03:14 result.tar.gz
03:14:38 (89938): run_atlas exited; CPU time 21415.197424
03:14:38 (89938): called boinc_finish(0)

</stderr_txt>
]]>

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