Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:17:53 (3639801): wrapper (7.7.26015): starting
19:17:53 (3639801): wrapper: running run_atlas (--nthreads 12)
[2025-10-05 19:17:53] Arguments: --nthreads 12
[2025-10-05 19:17:53] Threads: 12
[2025-10-05 19:17:53] Checking for CVMFS
[2025-10-05 19:17:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-05 19:17:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-05 19:17:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-05 19:17:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-05 19:17:56] 2.11.5.0 2660 22244 227392 151381 0 579 26938515 45568000 15380 130560 0 212696433 99.844 106976689 22384 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-05 19:17:56] CVMFS is ok
[2025-10-05 19:17:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-05 19:17:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-05 19:17:56] Further information can be found at the LHC@home message board.
[2025-10-05 19:17:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-05 19:17:56] Checking for apptainer binary...
[2025-10-05 19:17:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-05 19:17:56] Running /usr/bin/apptainer --version
[2025-10-05 19:17:56] apptainer version 1.4.1-1.el9
[2025-10-05 19:17:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-05 19:17:56] wns0032.triumf.lcg
[2025-10-05 19:17:56] apptainer works
[2025-10-05 19:17:56] Set ATHENA_PROC_NUMBER=12
[2025-10-05 19:17:56] Set ATHENA_CORE_NUMBER=12
[2025-10-05 19:17:56] Starting ATLAS job with PandaID=6832199212
[2025-10-05 19:17:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-05 19:22:59]  *** The last 200 lines of the pilot log: ***
[2025-10-05 19:22:59] 2025-10-06 02:22:25,274 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-05 19:22:59] 2025-10-06 02:22:25,274 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 19:22:59] 2025-10-06 02:22:25,274 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | WARNING  | wrong length of table data, x=[1759717176.0], y=[2083.0] (must be same and length>=4)
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | could have reported an average CPU frequency of 2730 MHz (4 samples)
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | ..............................
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . Timing measurements:
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . get job = 0 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . initial setup = 6 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . payload setup = 15 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . stage-in = 0 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . payload execution = 40 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . stage-out = 2 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . log creation = 0 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | ..............................
[2025-10-05 19:22:59] 2025-10-06 02:22:25,276 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-05 19:22:59] 2025-10-06 02:22:25,276 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832199212/pilotlog.txt
[2025-10-05 19:22:59] 2025-10-06 02:22:25,288 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-05 19:22:59] - Log from pilotlog.txt -
[2025-10-05 19:22:59] 2025-10-06 02:22:25,273 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6832199212/memory_monitor_summary.json (trf name=prmon)
[2025-10-05 19:22:59] 2025-10-06 02:22:25,274 | INFO     | extracted standard info from prmon json
[2025-10-05 19:22:59] 2025-10-06 02:22:25,274 | INFO     | extracted standard memory fields from prmon json
[2025-10-05 19:22:59] 2025-10-06 02:22:25,274 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-05 19:22:59] 2025-10-06 02:22:25,274 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 19:22:59] 2025-10-06 02:22:25,274 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | WARNING  | wrong length of table data, x=[1759717176.0], y=[2083.0] (must be same and length>=4)
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | could have reported an average CPU frequency of 2730 MHz (4 samples)
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | ..............................
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . Timing measurements:
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . get job = 0 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . initial setup = 6 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . payload setup = 15 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . stage-in = 0 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . payload execution = 40 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . stage-out = 2 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . log creation = 0 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | ..............................
[2025-10-05 19:22:59] 2025-10-06 02:22:25,276 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-05 19:22:59] 2025-10-06 02:22:25,276 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832199212/pilotlog.txt
[2025-10-05 19:22:59] 2025-10-06 02:22:25,289 | WARNING  | 
[2025-10-05 19:22:59] [begin log extracts]
[2025-10-05 19:22:59] - Log from pilotlog.txt -
[2025-10-05 19:22:59] 2025-10-06 02:22:25,273 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6832199212/memory_monitor_summary.json (trf name=prmon)
[2025-10-05 19:22:59] 2025-10-06 02:22:25,274 | INFO     | extracted standard info from prmon json
[2025-10-05 19:22:59] 2025-10-06 02:22:25,274 | INFO     | extracted standard memory fields from prmon json
[2025-10-05 19:22:59] 2025-10-06 02:22:25,274 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-05 19:22:59] 2025-10-06 02:22:25,274 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 19:22:59] 2025-10-06 02:22:25,274 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | WARNING  | wrong length of table data, x=[1759717176.0], y=[2083.0] (must be same and length>=4)
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | could have reported an average CPU frequency of 2730 MHz (4 samples)
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | ..............................
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . Timing measurements:
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . get job = 0 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . initial setup = 6 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . payload setup = 15 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . stage-in = 0 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . payload execution = 40 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . stage-out = 2 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | . log creation = 0 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,275 | INFO     | ..............................
[2025-10-05 19:22:59] 2025-10-06 02:22:25,276 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-05 19:22:59] 2025-10-06 02:22:25,276 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832199212/pilotlog.txt
[2025-10-05 19:22:59] [end log extracts]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,289 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-05 19:22:59] 2025-10-06 02:22:25,290 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-05 19:22:59] 2025-10-06 02:22:25,368 | INFO     | 
[2025-10-05 19:22:59] 2025-10-06 02:22:25,369 | INFO     | job summary report
[2025-10-05 19:22:59] 2025-10-06 02:22:25,369 | INFO     | --------------------------------------------------
[2025-10-05 19:22:59] 2025-10-06 02:22:25,369 | INFO     | PanDA job id: 6832199212
[2025-10-05 19:22:59] 2025-10-06 02:22:25,369 | INFO     | task id: 46376905
[2025-10-05 19:22:59] 2025-10-06 02:22:25,369 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-05 19:19:56,008 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-05 19:22:59] 2025-10-06 02:22:25,369 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-05 19:22:59] 2025-10-06 02:22:25,369 | INFO     | pilot state: failed 
[2025-10-05 19:22:59] 2025-10-06 02:22:25,369 | INFO     | transexitcode: 65
[2025-10-05 19:22:59] 2025-10-06 02:22:25,369 | INFO     | exeerrorcode: 65
[2025-10-05 19:22:59] 2025-10-06 02:22:25,369 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-05 19:22:59] 2025-10-06 02:22:25,369 | INFO     | exitcode: 65
[2025-10-05 19:22:59] 2025-10-06 02:22:25,369 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-05 19:22:59] 2025-10-06 02:22:25,369 | INFO     | cpuconsumptiontime: 16 s
[2025-10-05 19:22:59] 2025-10-06 02:22:25,369 | INFO     | nevents: 0
[2025-10-05 19:22:59] 2025-10-06 02:22:25,369 | INFO     | neventsw: 0
[2025-10-05 19:22:59] 2025-10-06 02:22:25,369 | INFO     | pid: 3650152
[2025-10-05 19:22:59] 2025-10-06 02:22:25,370 | INFO     | pgrp: 3650152
[2025-10-05 19:22:59] 2025-10-06 02:22:25,370 | INFO     | corecount: 12
[2025-10-05 19:22:59] 2025-10-06 02:22:25,370 | INFO     | event service: False
[2025-10-05 19:22:59] 2025-10-06 02:22:25,370 | INFO     | sizes: {0: 2348813, 1: 2348813, 12: 2348841, 15: 2349131, 22: 2349159, 60: 2372632, 63: 2376924, 66: 2376952, 200: 2377118}
[2025-10-05 19:22:59] 2025-10-06 02:22:25,370 | INFO     | --------------------------------------------------
[2025-10-05 19:22:59] 2025-10-06 02:22:25,370 | INFO     | 
[2025-10-05 19:22:59] 2025-10-06 02:22:25,370 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-05 19:22:59] 2025-10-06 02:22:25,384 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,385 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,385 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,385 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,385 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,385 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,385 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,385 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,385 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,385 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,385 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,385 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,385 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,385 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,385 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,385 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,385 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,385 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-05 19:22:59] 2025-10-06 02:22:25,385 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,386 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-05 19:22:59] 2025-10-06 02:22:25,386 | INFO     | job 6832199212 has completed (purged errors)
[2025-10-05 19:22:59] 2025-10-06 02:22:25,386 | INFO     | overall cleanup function is called
[2025-10-05 19:22:59] 2025-10-06 02:22:26,392 | INFO     | --- collectZombieJob: --- 10, [3650152]
[2025-10-05 19:22:59] 2025-10-06 02:22:26,392 | INFO     | zombie collector waiting for pid 3650152
[2025-10-05 19:22:59] 2025-10-06 02:22:26,392 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-05 19:22:59] 2025-10-06 02:22:26,392 | INFO     | collected zombie processes
[2025-10-05 19:22:59] 2025-10-06 02:22:26,392 | INFO     | will attempt to kill all subprocesses of pid=3650152
[2025-10-05 19:22:59] 2025-10-06 02:22:26,627 | INFO     | process IDs to be killed: [3650152] (in reverse order)
[2025-10-05 19:22:59] 2025-10-06 02:22:26,697 | WARNING  | found no corresponding commands to process id(s)
[2025-10-05 19:22:59] 2025-10-06 02:22:26,697 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-05 19:22:59] 2025-10-06 02:22:26,705 | INFO     | did not find any defunct processes belonging to 3650152
[2025-10-05 19:22:59] 2025-10-06 02:22:26,712 | INFO     | did not find any defunct processes belonging to 3650152
[2025-10-05 19:22:59] 2025-10-06 02:22:26,712 | INFO     | ready for new job
[2025-10-05 19:22:59] 2025-10-06 02:22:26,712 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-05 19:22:59] 2025-10-06 02:22:26,714 | INFO     | ***************************************
[2025-10-05 19:22:59] 2025-10-06 02:22:26,714 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-05 19:22:59] 2025-10-06 02:22:26,714 | INFO     | ***************************************
[2025-10-05 19:22:59] 2025-10-06 02:22:26,714 | INFO     | 
[2025-10-05 19:22:59] 2025-10-06 02:22:26,716 | INFO     | architecture information:
[2025-10-05 19:22:59] 2025-10-06 02:22:26,717 | INFO     | executing command: cat /etc/os-release
[2025-10-05 19:22:59] 2025-10-06 02:22:26,729 | INFO     | cat /etc/os-release:
[2025-10-05 19:22:59] NAME="CentOS Linux"
[2025-10-05 19:22:59] VERSION="7 (Core)"
[2025-10-05 19:22:59] ID="centos"
[2025-10-05 19:22:59] ID_LIKE="rhel fedora"
[2025-10-05 19:22:59] VERSION_ID="7"
[2025-10-05 19:22:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-05 19:22:59] ANSI_COLOR="0;31"
[2025-10-05 19:22:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-05 19:22:59] HOME_URL="https://www.centos.org/"
[2025-10-05 19:22:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-05 19:22:59] 
[2025-10-05 19:22:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-05 19:22:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-05 19:22:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-05 19:22:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-05 19:22:59] 
[2025-10-05 19:22:59] 2025-10-06 02:22:26,730 | INFO     | ***************************************
[2025-10-05 19:22:59] 2025-10-06 02:22:27,233 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-05 19:22:59] 2025-10-06 02:22:27,318 | INFO     | sufficient remaining disk space (2145632911360 B)
[2025-10-05 19:22:59] 2025-10-06 02:22:27,319 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-05 19:22:59] 2025-10-06 02:22:27,319 | INFO     | current server update state: UPDATING_FINAL
[2025-10-05 19:22:59] 2025-10-06 02:22:27,319 | INFO     | update_server=False
[2025-10-05 19:22:59] 2025-10-06 02:22:27,319 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-05 19:22:59] 2025-10-06 02:22:27,319 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-05 19:22:59] 2025-10-06 02:22:27,319 | INFO     | aborting loop
[2025-10-05 19:22:59] 2025-10-06 02:22:27,320 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-05 19:22:59] 2025-10-06 02:22:27,320 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-05 19:22:59] 2025-10-06 02:22:27,367 | INFO     | all payload control threads have been joined
[2025-10-05 19:22:59] 2025-10-06 02:22:27,470 | INFO     | all data control threads have been joined
[2025-10-05 19:22:59] 2025-10-06 02:22:27,974 | INFO     | all job control threads have been joined
[2025-10-05 19:22:59] 2025-10-06 02:22:28,325 | INFO     | [job] job monitor thread has finished
[2025-10-05 19:22:59] 2025-10-06 02:22:28,326 | INFO     | [job] retrieve thread has finished
[2025-10-05 19:22:59] 2025-10-06 02:22:28,326 | INFO     | [job] queue monitor thread has finished
[2025-10-05 19:22:59] 2025-10-06 02:22:28,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-05 19:22:59] 2025-10-06 02:22:28,373 | INFO     | [payload] control thread has finished
[2025-10-05 19:22:59] 2025-10-06 02:22:28,476 | INFO     | [data] control thread has finished
[2025-10-05 19:22:59] 2025-10-06 02:22:28,675 | INFO     | [payload] validate_pre thread has finished
[2025-10-05 19:22:59] 2025-10-06 02:22:28,749 | INFO     | [payload] validate_post thread has finished
[2025-10-05 19:22:59] 2025-10-06 02:22:28,772 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-05 19:22:59] 2025-10-06 02:22:28,777 | INFO     | [data] copytool_in thread has finished
[2025-10-05 19:22:59] 2025-10-06 02:22:28,846 | INFO     | [job] validate thread has finished
[2025-10-05 19:22:59] 2025-10-06 02:22:28,993 | INFO     | [job] control thread has finished
[2025-10-05 19:22:59] 2025-10-06 02:22:29,154 | INFO     | [monitor] cgroup control has ended
[2025-10-05 19:22:59] 2025-10-06 02:22:29,327 | INFO     | [data] copytool_out thread has finished
[2025-10-05 19:22:59] 2025-10-06 02:22:29,622 | INFO     | [job] create_data_payload thread has finished
[2025-10-05 19:22:59] 2025-10-06 02:22:29,706 | INFO     | [payload] failed_post thread has finished
[2025-10-05 19:22:59] 2025-10-06 02:22:29,800 | INFO     | [payload] execute_payloads thread has finished
[2025-10-05 19:22:59] 2025-10-06 02:22:32,336 | INFO     | [data] queue_monitor thread has finished
[2025-10-05 19:22:59] 2025-10-06 02:22:34,386 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139785022904128)>', '<ExcThread(monitor, started 139784265656064)>']
[2025-10-05 19:22:59] 2025-10-06 02:22:39,414 | INFO     | all workflow threads have been joined
[2025-10-05 19:22:59] 2025-10-06 02:22:39,426 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-05 19:22:59] 2025-10-06 02:22:39,426 | INFO     | traces error code: 0
[2025-10-05 19:22:59] 2025-10-06 02:22:39,427 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-05 19:22:59] 2025-10-06 02:22:58,635 | INFO     | PID=3643483 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-05 19:22:59] 2025-10-06 02:22:58,647 | INFO     | .. there are 28 such processes running
[2025-10-05 19:22:59] 2025-10-06 02:22:58,648 | INFO     | found 0 job(s) in 20 queues
[2025-10-05 19:22:59] 2025-10-06 02:22:58,648 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-05 19:22:59] 2025-10-06 02:22:58,648 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-05 19:22:59] 2025-10-06 02:22:58,648 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-05 19:22:59] 2025-10-06 02:22:58,648 | INFO     | [monitor] control thread has ended
[2025-10-05 19:22:59] 2025-10-06 02:22:59,091 [wrapper] ==== pilot stdout END ====
[2025-10-05 19:22:59] 2025-10-06 02:22:59,093 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-05 19:22:59] 2025-10-06 02:22:59,094 [wrapper] pilotpid: 3643483
[2025-10-05 19:22:59] 2025-10-06 02:22:59,096 [wrapper] Pilot exit status: 0
[2025-10-05 19:22:59] 2025-10-06 02:22:59,131 [wrapper] pandaids: 6832199212
[2025-10-05 19:22:59] 2025-10-06 02:22:59,366 [wrapper] cleanup supervisor_pilot 3643489 3643484
[2025-10-05 19:22:59] 2025-10-06 02:22:59,368 [wrapper] Test setup, not cleaning
[2025-10-05 19:22:59] 2025-10-06 02:22:59,371 [wrapper] apfmon messages muted
[2025-10-05 19:22:59] 2025-10-06 02:22:59,372 [wrapper] ==== wrapper stdout END ====
[2025-10-05 19:22:59] 2025-10-06 02:22:59,374 [wrapper] ==== wrapper stderr END ====
[2025-10-05 19:22:59]  *** Error codes and diagnostics ***
[2025-10-05 19:22:59]     "exeErrorCode": 65,
[2025-10-05 19:22:59]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-05 19:22:59]     "pilotErrorCode": 1305,
[2025-10-05 19:22:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-05 19:22:59]  *** Listing of results directory ***
[2025-10-05 19:22:59] total 213168
[2025-10-05 19:22:59] -rw-r--r--. 1 boinc boinc    552446 Oct  5 17:25 pilot3.tar.gz
[2025-10-05 19:22:59] -rwx------. 1 boinc boinc     36292 Oct  5 17:41 runpilot2-wrapper.sh
[2025-10-05 19:22:59] -rw-r--r--. 1 boinc boinc      5112 Oct  5 17:41 queuedata.json
[2025-10-05 19:22:59] -rw-r--r--. 1 boinc boinc       100 Oct  5 19:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-05 19:22:59] -rwxr-xr-x. 1 boinc boinc      7986 Oct  5 19:17 run_atlas
[2025-10-05 19:22:59] -rw-r--r--. 1 boinc boinc       105 Oct  5 19:17 job.xml
[2025-10-05 19:22:59] -rw-r--r--. 1 boinc boinc      6593 Oct  5 19:17 init_data.xml
[2025-10-05 19:22:59] -rw-r--r--. 2 boinc boinc 214178911 Oct  5 19:17 EVNT.46376901._003732.pool.root.1
[2025-10-05 19:22:59] -rw-r--r--. 2 boinc boinc     15120 Oct  5 19:17 start_atlas.sh
[2025-10-05 19:22:59] drwxrwx--x. 2 boinc boinc      4096 Oct  5 19:17 shared
[2025-10-05 19:22:59] -rw-r--r--. 2 boinc boinc    565598 Oct  5 19:17 input.tar.gz
[2025-10-05 19:22:59] -rw-r--r--. 1 boinc boinc         0 Oct  5 19:17 boinc_lockfile
[2025-10-05 19:22:59] -rw-r--r--. 1 boinc boinc      2519 Oct  5 19:17 pandaJob.out
[2025-10-05 19:22:59] -rw-------. 1 boinc boinc    974160 Oct  5 19:18 agis_schedconf.cvmfs.json
[2025-10-05 19:22:59] -rw-------. 1 boinc boinc   1560401 Oct  5 19:18 agis_ddmendpoints.agis.ALL.json
[2025-10-05 19:22:59] drwx------. 4 boinc boinc      4096 Oct  5 19:18 pilot3
[2025-10-05 19:22:59] -rw-r--r--. 1 boinc boinc       523 Oct  5 19:19 boinc_task_state.xml
[2025-10-05 19:22:59] -rw-------. 1 boinc boinc       945 Oct  5 19:20 memory_monitor_summary.json
[2025-10-05 19:22:59] -rw-------. 1 boinc boinc     21996 Oct  5 19:20 log.46376905._101000.job.log.tgz.1
[2025-10-05 19:22:59] -rw-------. 1 boinc boinc      8397 Oct  5 19:22 heartbeat.json
[2025-10-05 19:22:59] -rw-r--r--. 1 boinc boinc      8192 Oct  5 19:22 boinc_mmap_file
[2025-10-05 19:22:59] -rw-r--r--. 1 boinc boinc        22 Oct  5 19:22 wrapper_checkpoint.txt
[2025-10-05 19:22:59] -rw-------. 1 boinc boinc        95 Oct  5 19:22 pilot_heartbeat.json
[2025-10-05 19:22:59] -rw-------. 1 boinc boinc       823 Oct  5 19:22 pilotlog.txt
[2025-10-05 19:22:59] -rw-------. 1 boinc boinc     91754 Oct  5 19:22 log.46376905._101000.job.log.1
[2025-10-05 19:22:59] -rw-------. 1 boinc boinc       188 Oct  5 19:22 output.list
[2025-10-05 19:22:59] -rw-r--r--. 1 boinc boinc       620 Oct  5 19:22 runtime_log
[2025-10-05 19:22:59] -rw-------. 1 boinc boinc    133120 Oct  5 19:22 result.tar.gz
[2025-10-05 19:22:59] -rw-------. 1 boinc boinc       646 Oct  5 19:22 S5hLDmZToP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmL1HMDmWcr7Ym.diag
[2025-10-05 19:22:59] -rw-r--r--. 1 boinc boinc      8528 Oct  5 19:22 runtime_log.err
[2025-10-05 19:22:59] -rw-r--r--. 1 boinc boinc     21803 Oct  5 19:22 stderr.txt
[2025-10-05 19:22:59] No HITS result produced
[2025-10-05 19:22:59]  *** Contents of shared directory: ***
[2025-10-05 19:22:59] total 209864
[2025-10-05 19:22:59] -rw-r--r--. 2 boinc boinc 214178911 Oct  5 19:17 ATLAS.root_0
[2025-10-05 19:22:59] -rw-r--r--. 2 boinc boinc     15120 Oct  5 19:17 start_atlas.sh
[2025-10-05 19:22:59] -rw-r--r--. 2 boinc boinc    565598 Oct  5 19:17 input.tar.gz
[2025-10-05 19:22:59] -rw-------. 1 boinc boinc    133120 Oct  5 19:22 result.tar.gz
19:23:01 (3639801): run_atlas exited; CPU time 26.182396
19:23:01 (3639801): called boinc_finish(0)

</stderr_txt>
]]>

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