Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
06:34:23 (742202): wrapper (7.7.26015): starting
06:34:23 (742202): wrapper: running run_atlas (--nthreads 4)
[2025-10-06 06:34:23] Arguments: --nthreads 4
[2025-10-06 06:34:23] Threads: 4
[2025-10-06 06:34:23] Checking for CVMFS
[2025-10-06 06:34:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 06:34:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 06:34:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 06:34:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 06:34:23] 2.11.0.0 4848 3965 56536 151395 0 56 2298408 4096000 0 130560 0 1919873 99.986 128624 532 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-06 06:34:23] CVMFS is ok
[2025-10-06 06:34:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 06:34:24] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-06 06:34:24] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-06 06:34:24] Further information can be found at the LHC@home message board.
[2025-10-06 06:34:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 06:34:24] Checking for apptainer binary...
[2025-10-06 06:34:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 06:34:24] Running /usr/bin/apptainer --version
[2025-10-06 06:34:24] apptainer version 1.4.2-1.fc42
[2025-10-06 06:34:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 06:34:24] fedora
[2025-10-06 06:34:24] apptainer works
[2025-10-06 06:34:24] Set ATHENA_PROC_NUMBER=4
[2025-10-06 06:34:24] Set ATHENA_CORE_NUMBER=4
[2025-10-06 06:34:24] Starting ATLAS job with PandaID=6831977923
[2025-10-06 06:34:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 10:07:06]  *** The last 200 lines of the pilot log: ***
[2025-10-06 10:07:06] 2025-10-06 14:06:31,753 | INFO     | monitor loop #943: job 0:6831977923 is in state 'finished'
[2025-10-06 10:07:06] 2025-10-06 14:06:31,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 10:07:06] 2025-10-06 14:06:32,692 | INFO     | PID=745875 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-06 10:07:06] 2025-10-06 14:06:33,693 | INFO     | time since job start (12720s) is within the limit (172800.0s)
[2025-10-06 10:07:06] 2025-10-06 14:06:34,152 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-06 10:07:06] 2025-10-06 14:06:34,153 | INFO     | found 2 cores (2 cores per socket, 1 socket) HT, CPU MHz: 2999.97
[2025-10-06 10:07:06] 2025-10-06 14:06:34,154 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6831977923/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 10:07:06] 2025-10-06 14:06:34,154 | INFO     | extracted standard info from prmon json
[2025-10-06 10:07:06] 2025-10-06 14:06:34,155 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 10:07:06] 2025-10-06 14:06:34,155 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 10:07:06] 2025-10-06 14:06:34,155 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 10:07:06] 2025-10-06 14:06:34,155 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 10:07:06] 2025-10-06 14:06:34,158 | INFO     | fitting pss+swap vs Time
[2025-10-06 10:07:06] 2025-10-06 14:06:34,159 | INFO     | sum of square deviations: 2790348132.0
[2025-10-06 10:07:06] 2025-10-06 14:06:34,160 | INFO     | sum of deviations: -44900598851.0
[2025-10-06 10:07:06] 2025-10-06 14:06:34,160 | INFO     | mean x: 1759753209.5
[2025-10-06 10:07:06] 2025-10-06 14:06:34,160 | INFO     | mean y: 2400456.6346153845
[2025-10-06 10:07:06] 2025-10-06 14:06:34,160 | INFO     | -- intersect: 28319287525.448315
[2025-10-06 10:07:06] 2025-10-06 14:06:34,160 | INFO     | intersect: 28319287525.448315
[2025-10-06 10:07:06] 2025-10-06 14:06:34,161 | INFO     | chi2: 1.669130412261541
[2025-10-06 10:07:06] 2025-10-06 14:06:34,161 | INFO     | sum of square deviations: 2593916542.0
[2025-10-06 10:07:06] 2025-10-06 14:06:34,162 | INFO     | sum of deviations: -43554682895.0
[2025-10-06 10:07:06] 2025-10-06 14:06:34,162 | INFO     | mean x: 1759753057.0
[2025-10-06 10:07:06] 2025-10-06 14:06:34,162 | INFO     | mean y: 2401501.7438423648
[2025-10-06 10:07:06] 2025-10-06 14:06:34,162 | INFO     | -- intersect: 29550571279.03572
[2025-10-06 10:07:06] 2025-10-06 14:06:34,162 | INFO     | intersect: 29550571279.03572
[2025-10-06 10:07:06] 2025-10-06 14:06:34,163 | INFO     | chi2: 1.6626581742709003
[2025-10-06 10:07:06] 2025-10-06 14:06:34,163 | INFO     | current chi2=1.6626581742709003 (change=0.3877610726576593 %)
[2025-10-06 10:07:06] 2025-10-06 14:06:34,163 | INFO     | right removable region: 202
[2025-10-06 10:07:06] 2025-10-06 14:06:34,163 | INFO     | sum of square deviations: 2593916542.0
[2025-10-06 10:07:06] 2025-10-06 14:06:34,164 | INFO     | sum of deviations: -64262395107.00001
[2025-10-06 10:07:06] 2025-10-06 14:06:34,164 | INFO     | mean x: 1759753362.0
[2025-10-06 10:07:06] 2025-10-06 14:06:34,164 | INFO     | mean y: 2415179.0738916257
[2025-10-06 10:07:06] 2025-10-06 14:06:34,164 | INFO     | -- intersect: 43599024402.48491
[2025-10-06 10:07:06] 2025-10-06 14:06:34,164 | INFO     | intersect: 43599024402.48491
[2025-10-06 10:07:06] 2025-10-06 14:06:34,165 | INFO     | chi2: 0.4152767123306343
[2025-10-06 10:07:06] 2025-10-06 14:06:34,165 | INFO     | current chi2=0.4152767123306343 (change=75.12017579453443 %)
[2025-10-06 10:07:06] 2025-10-06 14:06:34,165 | INFO     | sum of square deviations: 2406926989.5
[2025-10-06 10:07:06] 2025-10-06 14:06:34,166 | INFO     | sum of deviations: -54517092294.499985
[2025-10-06 10:07:06] 2025-10-06 14:06:34,166 | INFO     | mean x: 1759753514.5
[2025-10-06 10:07:06] 2025-10-06 14:06:34,166 | INFO     | mean y: 2407227.883838384
[2025-10-06 10:07:06] 2025-10-06 14:06:34,166 | INFO     | -- intersect: 39860967617.992096
[2025-10-06 10:07:06] 2025-10-06 14:06:34,166 | INFO     | intersect: 39860967617.992096
[2025-10-06 10:07:06] 2025-10-06 14:06:34,167 | INFO     | chi2: 0.3934568827247447
[2025-10-06 10:07:06] 2025-10-06 14:06:34,167 | INFO     | current chi2=0.3934568827247447 (change=5.254286830444058 %)
[2025-10-06 10:07:06] 2025-10-06 14:06:34,167 | INFO     | left removable region: 20
[2025-10-06 10:07:06] 2025-10-06 14:06:34,167 | INFO     | sum of square deviations: 1869302025.5
[2025-10-06 10:07:06] 2025-10-06 14:06:34,168 | INFO     | sum of deviations: -32616320763.000004
[2025-10-06 10:07:06] 2025-10-06 14:06:34,168 | INFO     | mean x: 1759753636.5
[2025-10-06 10:07:06] 2025-10-06 14:06:34,168 | INFO     | mean y: 2389880.5054945056
[2025-10-06 10:07:06] 2025-10-06 14:06:34,168 | INFO     | -- intersect: 30707267042.657646
[2025-10-06 10:07:06] 2025-10-06 14:06:34,168 | INFO     | intersect: 30707267042.657646
[2025-10-06 10:07:06] 2025-10-06 14:06:34,169 | INFO     | chi2: 0.30393511544700896
[2025-10-06 10:07:06] 2025-10-06 14:06:34,169 | INFO     | -- intersect: 30707267042.657646
[2025-10-06 10:07:06] 2025-10-06 14:06:34,169 | INFO     | current memory leak: -17.45 B/s (using 182 data points, chi2=0.30)
[2025-10-06 10:07:06] 2025-10-06 14:06:34,169 | INFO     | could have reported an average CPU frequency of 2840 MHz (10 samples)
[2025-10-06 10:07:06] 2025-10-06 14:06:34,169 | INFO     | ..............................
[2025-10-06 10:07:06] 2025-10-06 14:06:34,169 | INFO     | . Timing measurements:
[2025-10-06 10:07:06] 2025-10-06 14:06:34,169 | INFO     | . get job = 0 s
[2025-10-06 10:07:06] 2025-10-06 14:06:34,170 | INFO     | . initial setup = 3 s
[2025-10-06 10:07:06] 2025-10-06 14:06:34,170 | INFO     | . payload setup = 3 s
[2025-10-06 10:07:06] 2025-10-06 14:06:34,170 | INFO     | . stage-in = 0 s
[2025-10-06 10:07:06] 2025-10-06 14:06:34,170 | INFO     | . payload execution = 12688 s
[2025-10-06 10:07:06] 2025-10-06 14:06:34,170 | INFO     | . stage-out = 2 s
[2025-10-06 10:07:06] 2025-10-06 14:06:34,170 | INFO     | . log creation = 0 s
[2025-10-06 10:07:06] 2025-10-06 14:06:34,170 | INFO     | ..............................
[2025-10-06 10:07:06] 2025-10-06 14:06:34,217 | INFO     | 
[2025-10-06 10:07:06] 2025-10-06 14:06:34,217 | INFO     | job summary report
[2025-10-06 10:07:06] 2025-10-06 14:06:34,217 | INFO     | --------------------------------------------------
[2025-10-06 10:07:06] 2025-10-06 14:06:34,217 | INFO     | PanDA job id: 6831977923
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | task id: 46376905
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | errors: (none)
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | pilot state: finished 
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | transexitcode: 0
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | exeerrorcode: 0
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | exeerrordiag: 
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | exitcode: 0
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | exitmsg: OK
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | cpuconsumptiontime: 36773 s
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | nevents: 400
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | neventsw: 0
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | pid: 752248
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | pgrp: 752248
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | corecount: 4
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | event service: False
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | sizes: {0: 2348645, 1: 2348844, 3: 2349106, 11: 2349134, 12695: 2379144, 12698: 2388326, 12707: 2388464}
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | --------------------------------------------------
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | 
[2025-10-06 10:07:06] 2025-10-06 14:06:34,218 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-06 10:07:06] 2025-10-06 14:06:34,232 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 10:07:06] 2025-10-06 14:06:34,232 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 10:07:06] 2025-10-06 14:06:34,232 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 10:07:06] 2025-10-06 14:06:34,232 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 10:07:06] 2025-10-06 14:06:34,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 10:07:06] 2025-10-06 14:06:34,233 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 10:07:06] 2025-10-06 14:06:34,233 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 10:07:06] 2025-10-06 14:06:34,233 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 10:07:06] 2025-10-06 14:06:34,233 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 10:07:06] 2025-10-06 14:06:34,233 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 10:07:06] 2025-10-06 14:06:34,233 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 10:07:06] 2025-10-06 14:06:34,233 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 10:07:06] 2025-10-06 14:06:34,233 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 10:07:06] 2025-10-06 14:06:34,233 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 10:07:06] 2025-10-06 14:06:34,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 10:07:06] 2025-10-06 14:06:34,233 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 10:07:06] 2025-10-06 14:06:34,233 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 10:07:06] 2025-10-06 14:06:34,234 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 10:07:06] 2025-10-06 14:06:34,234 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 10:07:06] 2025-10-06 14:06:34,234 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 10:07:06] 2025-10-06 14:06:34,234 | INFO     | job 6831977923 has completed (purged errors)
[2025-10-06 10:07:06] 2025-10-06 14:06:34,234 | INFO     | overall cleanup function is called
[2025-10-06 10:07:06] 2025-10-06 14:06:35,241 | INFO     | --- collectZombieJob: --- 10, [752248]
[2025-10-06 10:07:06] 2025-10-06 14:06:35,241 | INFO     | zombie collector waiting for pid 752248
[2025-10-06 10:07:06] 2025-10-06 14:06:35,241 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 10:07:06] 2025-10-06 14:06:35,241 | INFO     | collected zombie processes
[2025-10-06 10:07:06] 2025-10-06 14:06:35,241 | INFO     | will attempt to kill all subprocesses of pid=752248
[2025-10-06 10:07:06] 2025-10-06 14:06:35,295 | INFO     | process IDs to be killed: [752248] (in reverse order)
[2025-10-06 10:07:06] 2025-10-06 14:06:35,324 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 10:07:06] 2025-10-06 14:06:35,325 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 10:07:06] 2025-10-06 14:06:35,327 | INFO     | did not find any defunct processes belonging to 752248
[2025-10-06 10:07:06] 2025-10-06 14:06:35,330 | INFO     | did not find any defunct processes belonging to 752248
[2025-10-06 10:07:06] 2025-10-06 14:06:35,330 | INFO     | ready for new job
[2025-10-06 10:07:06] 2025-10-06 14:06:35,330 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 10:07:06] 2025-10-06 14:06:35,332 | INFO     | ***************************************
[2025-10-06 10:07:06] 2025-10-06 14:06:35,332 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 10:07:06] 2025-10-06 14:06:35,332 | INFO     | ***************************************
[2025-10-06 10:07:06] 2025-10-06 14:06:35,332 | INFO     | 
[2025-10-06 10:07:06] 2025-10-06 14:06:35,332 | INFO     | architecture information:
[2025-10-06 10:07:06] 2025-10-06 14:06:35,332 | INFO     | executing command: cat /etc/os-release
[2025-10-06 10:07:06] 2025-10-06 14:06:35,343 | INFO     | cat /etc/os-release:
[2025-10-06 10:07:06] NAME="CentOS Linux"
[2025-10-06 10:07:06] VERSION="7 (Core)"
[2025-10-06 10:07:06] ID="centos"
[2025-10-06 10:07:06] ID_LIKE="rhel fedora"
[2025-10-06 10:07:06] VERSION_ID="7"
[2025-10-06 10:07:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 10:07:06] ANSI_COLOR="0;31"
[2025-10-06 10:07:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 10:07:06] HOME_URL="https://www.centos.org/"
[2025-10-06 10:07:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 10:07:06] 
[2025-10-06 10:07:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 10:07:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 10:07:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 10:07:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 10:07:06] 
[2025-10-06 10:07:06] 2025-10-06 14:06:35,344 | INFO     | ***************************************
[2025-10-06 10:07:06] 2025-10-06 14:06:35,846 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-06 10:07:06] 2025-10-06 14:06:35,857 | INFO     | sufficient remaining disk space (341718335488 B)
[2025-10-06 10:07:06] 2025-10-06 14:06:35,857 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 10:07:06] 2025-10-06 14:06:35,857 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 10:07:06] 2025-10-06 14:06:35,857 | INFO     | update_server=False
[2025-10-06 10:07:06] 2025-10-06 14:06:35,857 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 10:07:06] 2025-10-06 14:06:35,858 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 10:07:06] 2025-10-06 14:06:35,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 10:07:06] 2025-10-06 14:06:35,858 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 10:07:06] 2025-10-06 14:06:35,858 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 10:07:06] 2025-10-06 14:06:35,858 | INFO     | aborting loop
[2025-10-06 10:07:06] 2025-10-06 14:06:36,632 | INFO     | all payload control threads have been joined
[2025-10-06 10:07:06] 2025-10-06 14:06:36,710 | INFO     | all data control threads have been joined
[2025-10-06 10:07:06] 2025-10-06 14:06:36,863 | INFO     | [job] queue monitor thread has finished
[2025-10-06 10:07:06] 2025-10-06 14:06:36,863 | INFO     | [job] retrieve thread has finished
[2025-10-06 10:07:06] 2025-10-06 14:06:36,863 | INFO     | [job] job monitor thread has finished
[2025-10-06 10:07:06] 2025-10-06 14:06:37,437 | INFO     | all job control threads have been joined
[2025-10-06 10:07:06] 2025-10-06 14:06:37,507 | INFO     | [job] validate thread has finished
[2025-10-06 10:07:06] 2025-10-06 14:06:37,637 | INFO     | [payload] control thread has finished
[2025-10-06 10:07:06] 2025-10-06 14:06:37,663 | INFO     | [payload] validate_post thread has finished
[2025-10-06 10:07:06] 2025-10-06 14:06:37,709 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 10:07:06] 2025-10-06 14:06:37,715 | INFO     | [data] control thread has finished
[2025-10-06 10:07:06] 2025-10-06 14:06:37,778 | INFO     | [data] copytool_in thread has finished
[2025-10-06 10:07:06] 2025-10-06 14:06:37,831 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 10:07:06] 2025-10-06 14:06:37,863 | INFO     | [data] copytool_out thread has finished
[2025-10-06 10:07:06] 2025-10-06 14:06:37,887 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 10:07:06] 2025-10-06 14:06:37,931 | INFO     | [payload] failed_post thread has finished
[2025-10-06 10:07:06] 2025-10-06 14:06:38,225 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 10:07:06] 2025-10-06 14:06:38,442 | INFO     | [job] control thread has finished
[2025-10-06 10:07:06] 2025-10-06 14:06:39,863 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 10:07:06] 2025-10-06 14:06:54,011 | INFO     | [monitor] cgroup control has ended
[2025-10-06 10:07:06] 2025-10-06 14:06:54,878 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140209714349888)>', '<ExcThread(monitor, started 140209006049024)>']
[2025-10-06 10:07:06] 2025-10-06 14:06:59,902 | INFO     | all workflow threads have been joined
[2025-10-06 10:07:06] 2025-10-06 14:06:59,903 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 10:07:06] 2025-10-06 14:06:59,903 | INFO     | traces error code: 0
[2025-10-06 10:07:06] 2025-10-06 14:06:59,903 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 10:07:06] 2025-10-06 14:07:06,829 | INFO     | PID=745875 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-06 10:07:06] 2025-10-06 14:07:06,829 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 10:07:06] 2025-10-06 14:07:06,829 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 10:07:06] 2025-10-06 14:07:06,829 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 10:07:06] 2025-10-06 14:07:06,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 10:07:06] 2025-10-06 14:07:06,830 | INFO     | [monitor] control thread has ended
[2025-10-06 10:07:06] 2025-10-06 14:07:06,903 [wrapper] ==== pilot stdout END ====
[2025-10-06 10:07:06] 2025-10-06 14:07:06,905 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 10:07:06] 2025-10-06 14:07:06,907 [wrapper] pilotpid: 745875
[2025-10-06 10:07:06] 2025-10-06 14:07:06,909 [wrapper] Pilot exit status: 0
[2025-10-06 10:07:06] 2025-10-06 14:07:06,917 [wrapper] pandaids: 6831977923
[2025-10-06 10:07:06] 2025-10-06 14:07:06,937 [wrapper] cleanup supervisor_pilot  773886 745876
[2025-10-06 10:07:06] 2025-10-06 14:07:06,939 [wrapper] Test setup, not cleaning
[2025-10-06 10:07:06] 2025-10-06 14:07:06,941 [wrapper] apfmon messages muted
[2025-10-06 10:07:06] 2025-10-06 14:07:06,943 [wrapper] ==== wrapper stdout END ====
[2025-10-06 10:07:06] 2025-10-06 14:07:06,945 [wrapper] ==== wrapper stderr END ====
[2025-10-06 10:07:06]  *** Error codes and diagnostics ***
[2025-10-06 10:07:06]     "exeErrorCode": 0,
[2025-10-06 10:07:06]     "exeErrorDiag": "",
[2025-10-06 10:07:06]     "pilotErrorCode": 0,
[2025-10-06 10:07:06]     "pilotErrorDiag": "",
[2025-10-06 10:07:06]  *** Listing of results directory ***
[2025-10-06 10:07:07] total 386360
[2025-10-06 10:07:07] -rw-r--r--. 1 boinc boinc    552446 Oct  5 16:57 pilot3.tar.gz
[2025-10-06 10:07:07] -rwx------. 1 boinc boinc     36292 Oct  5 17:28 runpilot2-wrapper.sh
[2025-10-06 10:07:07] -rw-r--r--. 1 boinc boinc      5112 Oct  5 17:28 queuedata.json
[2025-10-06 10:07:07] -rw-r--r--. 1 boinc boinc       100 Oct  6 06:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 10:07:07] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 06:34 run_atlas
[2025-10-06 10:07:07] -rw-r--r--. 1 boinc boinc       105 Oct  6 06:34 job.xml
[2025-10-06 10:07:07] -rw-r--r--. 2 boinc boinc 213355476 Oct  6 06:34 EVNT.46376901._003570.pool.root.1
[2025-10-06 10:07:07] -rw-r--r--. 1 boinc boinc      6745 Oct  6 06:34 init_data.xml
[2025-10-06 10:07:07] drwxrwx--x. 2 boinc boinc      4096 Oct  6 06:34 shared
[2025-10-06 10:07:07] -rw-r--r--. 2 boinc boinc    565602 Oct  6 06:34 input.tar.gz
[2025-10-06 10:07:07] -rw-r--r--. 2 boinc boinc     15120 Oct  6 06:34 start_atlas.sh
[2025-10-06 10:07:07] -rw-r--r--. 1 boinc boinc         0 Oct  6 06:34 boinc_lockfile
[2025-10-06 10:07:07] -rw-r--r--. 1 boinc boinc      2519 Oct  6 06:34 pandaJob.out
[2025-10-06 10:07:07] -rw-------. 1 boinc boinc    975011 Oct  6 06:34 agis_schedconf.cvmfs.json
[2025-10-06 10:07:07] drwx------. 4 boinc boinc      4096 Oct  6 06:34 pilot3
[2025-10-06 10:07:07] -rw-------. 1 boinc boinc 174104592 Oct  6 10:05 HITS.46376905._096742.pool.root.1
[2025-10-06 10:07:07] -rw-r--r--. 1 boinc boinc       530 Oct  6 10:06 boinc_task_state.xml
[2025-10-06 10:07:07] -rw-------. 1 boinc boinc      1020 Oct  6 10:06 memory_monitor_summary.json
[2025-10-06 10:07:07] -rw-------. 1 boinc boinc   1560401 Oct  6 10:06 agis_ddmendpoints.agis.ALL.json
[2025-10-06 10:07:07] -rw-------. 1 boinc boinc    385980 Oct  6 10:06 log.46376905._096742.job.log.tgz.1
[2025-10-06 10:07:07] -rw-------. 1 boinc boinc        95 Oct  6 10:06 pilot_heartbeat.json
[2025-10-06 10:07:07] -rw-------. 1 boinc boinc      7769 Oct  6 10:06 heartbeat.json
[2025-10-06 10:07:07] -rw-r--r--. 1 boinc boinc      8192 Oct  6 10:06 boinc_mmap_file
[2025-10-06 10:07:07] -rw-r--r--. 1 boinc boinc        28 Oct  6 10:06 wrapper_checkpoint.txt
[2025-10-06 10:07:07] -rw-------. 1 boinc boinc       746 Oct  6 10:07 pilotlog.txt
[2025-10-06 10:07:07] -rw-------. 1 boinc boinc   1754175 Oct  6 10:07 log.46376905._096742.job.log.1
[2025-10-06 10:07:07] -rw-------. 1 boinc boinc       357 Oct  6 10:07 output.list
[2025-10-06 10:07:07] -rw-r--r--. 1 boinc boinc       620 Oct  6 10:07 runtime_log
[2025-10-06 10:07:07] -rw-------. 1 boinc boinc   2160640 Oct  6 10:07 result.tar.gz
[2025-10-06 10:07:07] -rw-------. 1 boinc boinc       647 Oct  6 10:07 v6rNDmkSlP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmuaHMDmWg3FTn.diag
[2025-10-06 10:07:07] -rw-r--r--. 1 boinc boinc      8659 Oct  6 10:07 runtime_log.err
[2025-10-06 10:07:07] -rw-r--r--. 1 boinc boinc     21271 Oct  6 10:07 stderr.txt
[2025-10-06 10:07:07] HITS file was successfully produced:
[2025-10-06 10:07:07] -rw-------. 1 boinc boinc 174104592 Oct  6 10:05 shared/HITS.pool.root.1
[2025-10-06 10:07:07]  *** Contents of shared directory: ***
[2025-10-06 10:07:07] total 381076
[2025-10-06 10:07:07] -rw-r--r--. 2 boinc boinc 213355476 Oct  6 06:34 ATLAS.root_0
[2025-10-06 10:07:07] -rw-r--r--. 2 boinc boinc    565602 Oct  6 06:34 input.tar.gz
[2025-10-06 10:07:07] -rw-r--r--. 2 boinc boinc     15120 Oct  6 06:34 start_atlas.sh
[2025-10-06 10:07:07] -rw-------. 1 boinc boinc 174104592 Oct  6 10:05 HITS.pool.root.1
[2025-10-06 10:07:07] -rw-------. 1 boinc boinc   2160640 Oct  6 10:07 result.tar.gz
10:07:08 (742202): run_atlas exited; CPU time 36913.754159
10:07:08 (742202): called boinc_finish(0)

</stderr_txt>
]]>

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