Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:57:27 (20642): wrapper (7.7.26015): starting
22:57:27 (20642): wrapper: running run_atlas (--nthreads 8)
[2025-10-06 22:57:27] Arguments: --nthreads 8
[2025-10-06 22:57:27] Threads: 8
[2025-10-06 22:57:27] Checking for CVMFS
[2025-10-06 22:57:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 22:57:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 22:57:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 22:57:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 22:57:29] 2.11.2.0 24698 99245 116208 151410 0 61 12663583 25165825 4632 130560 0 36572347 99.919 15020413 2601 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-06 22:57:29] CVMFS is ok
[2025-10-06 22:57:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 22:57:29] Checking for apptainer binary...
[2025-10-06 22:57:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 22:57:29] Running /usr/bin/apptainer --version
[2025-10-06 22:57:29] apptainer version 1.3.2-1.el7
[2025-10-06 22:57:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 22:57:50] cg-vwn342.simple-grid.lan
[2025-10-06 22:57:50] apptainer works
[2025-10-06 22:57:50] Set ATHENA_PROC_NUMBER=8
[2025-10-06 22:57:50] Set ATHENA_CORE_NUMBER=8
[2025-10-06 22:57:50] Starting ATLAS job with PandaID=6831777354
[2025-10-06 22:57:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 02:52:43]  *** The last 200 lines of the pilot log: ***
[2025-10-07 02:52:43] 2025-10-07 00:51:55,512 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 02:52:43] 2025-10-07 00:51:55,512 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 02:52:43] 2025-10-07 00:51:55,516 | INFO     | fitting pss+swap vs Time
[2025-10-07 02:52:43] 2025-10-07 00:51:55,517 | INFO     | sum of square deviations: 3256879670.0
[2025-10-07 02:52:43] 2025-10-07 00:51:55,520 | INFO     | sum of deviations: 79775886315.00003
[2025-10-07 02:52:43] 2025-10-07 00:51:55,520 | INFO     | mean x: 1759791532.0
[2025-10-07 02:52:43] 2025-10-07 00:51:55,521 | INFO     | mean y: 2427183.872146119
[2025-10-07 02:52:43] 2025-10-07 00:51:55,521 | INFO     | -- intersect: -43102920087.04245
[2025-10-07 02:52:43] 2025-10-07 00:51:55,521 | INFO     | intersect: -43102920087.04245
[2025-10-07 02:52:43] 2025-10-07 00:51:55,521 | INFO     | chi2: 7.984976956916381
[2025-10-07 02:52:43] 2025-10-07 00:51:55,522 | INFO     | sum of square deviations: 3038856977.5
[2025-10-07 02:52:43] 2025-10-07 00:51:55,523 | INFO     | sum of deviations: 92582821827.5
[2025-10-07 02:52:43] 2025-10-07 00:51:55,524 | INFO     | mean x: 1759791379.5
[2025-10-07 02:52:43] 2025-10-07 00:51:55,524 | INFO     | mean y: 2435953.574766355
[2025-10-07 02:52:43] 2025-10-07 00:51:55,524 | INFO     | -- intersect: -53611950293.669716
[2025-10-07 02:52:43] 2025-10-07 00:51:55,524 | INFO     | intersect: -53611950293.669716
[2025-10-07 02:52:43] 2025-10-07 00:51:55,527 | INFO     | chi2: 7.279739862697313
[2025-10-07 02:52:43] 2025-10-07 00:51:55,528 | INFO     | current chi2=7.279739862697313 (change=8.832049209712626 %)
[2025-10-07 02:52:43] 2025-10-07 00:51:55,528 | INFO     | right removable region: 213
[2025-10-07 02:52:43] 2025-10-07 00:51:55,528 | INFO     | sum of square deviations: 3038856977.5
[2025-10-07 02:52:43] 2025-10-07 00:51:55,530 | INFO     | sum of deviations: 4801469850.499996
[2025-10-07 02:52:43] 2025-10-07 00:51:55,530 | INFO     | mean x: 1759791684.5
[2025-10-07 02:52:43] 2025-10-07 00:51:55,534 | INFO     | mean y: 2479588.5186915887
[2025-10-07 02:52:43] 2025-10-07 00:51:55,534 | INFO     | -- intersect: -2778035183.597579
[2025-10-07 02:52:43] 2025-10-07 00:51:55,534 | INFO     | intersect: -2778035183.597579
[2025-10-07 02:52:43] 2025-10-07 00:51:55,534 | INFO     | chi2: 3.062759079689954
[2025-10-07 02:52:43] 2025-10-07 00:51:55,535 | INFO     | current chi2=3.062759079689954 (change=61.64348255210591 %)
[2025-10-07 02:52:43] 2025-10-07 00:51:55,535 | INFO     | sum of square deviations: 2830787960.0
[2025-10-07 02:52:43] 2025-10-07 00:51:55,536 | INFO     | sum of deviations: -43608190387.0
[2025-10-07 02:52:43] 2025-10-07 00:51:55,537 | INFO     | mean x: 1759791837.0
[2025-10-07 02:52:43] 2025-10-07 00:51:55,537 | INFO     | mean y: 2514935.301435407
[2025-10-07 02:52:43] 2025-10-07 00:51:55,537 | INFO     | -- intersect: 27112047176.417957
[2025-10-07 02:52:43] 2025-10-07 00:51:55,537 | INFO     | intersect: 27112047176.417957
[2025-10-07 02:52:43] 2025-10-07 00:51:55,537 | INFO     | chi2: 0.9676507802483195
[2025-10-07 02:52:43] 2025-10-07 00:51:55,538 | INFO     | current chi2=0.9676507802483195 (change=68.40591260784782 %)
[2025-10-07 02:52:43] 2025-10-07 00:51:55,538 | INFO     | sum of square deviations: 2632440055.0
[2025-10-07 02:52:43] 2025-10-07 00:51:55,539 | INFO     | sum of deviations: -48894237893.499985
[2025-10-07 02:52:43] 2025-10-07 00:51:55,540 | INFO     | mean x: 1759791989.5
[2025-10-07 02:52:43] 2025-10-07 00:51:55,540 | INFO     | mean y: 2518935.504901961
[2025-10-07 02:52:43] 2025-10-07 00:51:55,540 | INFO     | -- intersect: 32688424931.449272
[2025-10-07 02:52:43] 2025-10-07 00:51:55,540 | INFO     | intersect: 32688424931.449272
[2025-10-07 02:52:43] 2025-10-07 00:51:55,540 | INFO     | chi2: 0.8916897915089874
[2025-10-07 02:52:43] 2025-10-07 00:51:55,540 | INFO     | current chi2=0.8916897915089874 (change=7.850041594534643 %)
[2025-10-07 02:52:43] 2025-10-07 00:51:55,540 | INFO     | left removable region: 30
[2025-10-07 02:52:43] 2025-10-07 00:51:55,541 | INFO     | sum of square deviations: 1900284932.0
[2025-10-07 02:52:43] 2025-10-07 00:51:55,542 | INFO     | sum of deviations: -24118499091.0
[2025-10-07 02:52:43] 2025-10-07 00:51:55,542 | INFO     | mean x: 1759792264.0
[2025-10-07 02:52:43] 2025-10-07 00:51:55,542 | INFO     | mean y: 2521929.8469945355
[2025-10-07 02:52:43] 2025-10-07 00:51:55,543 | INFO     | -- intersect: 22337881961.86183
[2025-10-07 02:52:43] 2025-10-07 00:51:55,543 | INFO     | intersect: 22337881961.86183
[2025-10-07 02:52:43] 2025-10-07 00:51:55,543 | INFO     | chi2: 0.08232992905141809
[2025-10-07 02:52:43] 2025-10-07 00:51:55,543 | INFO     | -- intersect: 22337881961.86183
[2025-10-07 02:52:43] 2025-10-07 00:51:55,543 | INFO     | current memory leak: -12.69 B/s (using 183 data points, chi2=0.08)
[2025-10-07 02:52:43] 2025-10-07 00:51:55,544 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-07 02:52:43] 2025-10-07 00:51:55,544 | INFO     | ..............................
[2025-10-07 02:52:43] 2025-10-07 00:51:55,553 | INFO     | . Timing measurements:
[2025-10-07 02:52:43] 2025-10-07 00:51:55,553 | INFO     | . get job = 0 s
[2025-10-07 02:52:43] 2025-10-07 00:51:55,553 | INFO     | . initial setup = 7 s
[2025-10-07 02:52:43] 2025-10-07 00:51:55,553 | INFO     | . payload setup = 115 s
[2025-10-07 02:52:43] 2025-10-07 00:51:55,553 | INFO     | . stage-in = 0 s
[2025-10-07 02:52:43] 2025-10-07 00:51:55,553 | INFO     | . payload execution = 13481 s
[2025-10-07 02:52:43] 2025-10-07 00:51:55,553 | INFO     | . stage-out = 2 s
[2025-10-07 02:52:43] 2025-10-07 00:51:55,553 | INFO     | . log creation = 0 s
[2025-10-07 02:52:43] 2025-10-07 00:51:55,553 | INFO     | ..............................
[2025-10-07 02:52:43] 2025-10-07 00:51:55,719 | INFO     | 
[2025-10-07 02:52:43] 2025-10-07 00:51:55,720 | INFO     | job summary report
[2025-10-07 02:52:43] 2025-10-07 00:51:55,720 | INFO     | --------------------------------------------------
[2025-10-07 02:52:43] 2025-10-07 00:51:55,720 | INFO     | PanDA job id: 6831777354
[2025-10-07 02:52:43] 2025-10-07 00:51:55,720 | INFO     | task id: 46376905
[2025-10-07 02:52:43] 2025-10-07 00:51:55,720 | INFO     | errors: (none)
[2025-10-07 02:52:43] 2025-10-07 00:51:55,720 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 02:52:43] 2025-10-07 00:51:55,720 | INFO     | pilot state: finished 
[2025-10-07 02:52:43] 2025-10-07 00:51:55,720 | INFO     | transexitcode: 0
[2025-10-07 02:52:43] 2025-10-07 00:51:55,720 | INFO     | exeerrorcode: 0
[2025-10-07 02:52:43] 2025-10-07 00:51:55,721 | INFO     | exeerrordiag: 
[2025-10-07 02:52:43] 2025-10-07 00:51:55,721 | INFO     | exitcode: 0
[2025-10-07 02:52:43] 2025-10-07 00:51:55,721 | INFO     | exitmsg: OK
[2025-10-07 02:52:43] 2025-10-07 00:51:55,721 | INFO     | cpuconsumptiontime: 48081 s
[2025-10-07 02:52:43] 2025-10-07 00:51:55,721 | INFO     | nevents: 400
[2025-10-07 02:52:43] 2025-10-07 00:51:55,721 | INFO     | neventsw: 0
[2025-10-07 02:52:43] 2025-10-07 00:51:55,721 | INFO     | pid: 31031
[2025-10-07 02:52:43] 2025-10-07 00:51:55,721 | INFO     | pgrp: 31031
[2025-10-07 02:52:43] 2025-10-07 00:51:55,721 | INFO     | corecount: 8
[2025-10-07 02:52:43] 2025-10-07 00:51:55,721 | INFO     | event service: False
[2025-10-07 02:52:43] 2025-10-07 00:51:55,721 | INFO     | sizes: {0: 2348589, 1: 2348844, 2: 2348844, 12: 2348872, 23: 2348900, 34: 2348928, 45: 2349084, 55: 2349112, 66: 2349140, 77: 2349168, 87: 2349794, 13599: 2379590,
[2025-10-07 02:52:43] 2025-10-07 00:51:55,722 | INFO     | --------------------------------------------------
[2025-10-07 02:52:43] 2025-10-07 00:51:55,722 | INFO     | 
[2025-10-07 02:52:43] 2025-10-07 00:51:55,722 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-07 02:52:43] 2025-10-07 00:51:56,159 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 02:52:43] 2025-10-07 00:51:56,159 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 02:52:43] 2025-10-07 00:51:56,159 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 02:52:43] 2025-10-07 00:51:56,160 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 02:52:43] 2025-10-07 00:51:56,160 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 02:52:43] 2025-10-07 00:51:56,160 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 02:52:43] 2025-10-07 00:51:56,160 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 02:52:43] 2025-10-07 00:51:56,160 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 02:52:43] 2025-10-07 00:51:56,160 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 02:52:43] 2025-10-07 00:51:56,160 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 02:52:43] 2025-10-07 00:51:56,160 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 02:52:43] 2025-10-07 00:51:56,160 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 02:52:43] 2025-10-07 00:51:56,160 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 02:52:43] 2025-10-07 00:51:56,161 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 02:52:43] 2025-10-07 00:51:56,161 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 02:52:43] 2025-10-07 00:51:56,161 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 02:52:43] 2025-10-07 00:51:56,161 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 02:52:43] 2025-10-07 00:51:56,161 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 02:52:43] 2025-10-07 00:51:56,161 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 02:52:43] 2025-10-07 00:51:56,161 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 02:52:43] 2025-10-07 00:51:56,161 | INFO     | job 6831777354 has completed (purged errors)
[2025-10-07 02:52:43] 2025-10-07 00:51:56,162 | INFO     | overall cleanup function is called
[2025-10-07 02:52:43] 2025-10-07 00:51:57,170 | INFO     | --- collectZombieJob: --- 10, [31031]
[2025-10-07 02:52:43] 2025-10-07 00:51:57,171 | INFO     | zombie collector waiting for pid 31031
[2025-10-07 02:52:43] 2025-10-07 00:51:57,171 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 02:52:43] 2025-10-07 00:51:57,171 | INFO     | collected zombie processes
[2025-10-07 02:52:43] 2025-10-07 00:51:57,171 | INFO     | will attempt to kill all subprocesses of pid=31031
[2025-10-07 02:52:43] 2025-10-07 00:51:57,298 | INFO     | process IDs to be killed: [31031] (in reverse order)
[2025-10-07 02:52:43] 2025-10-07 00:51:57,654 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 02:52:43] 2025-10-07 00:51:57,655 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 02:52:43] 2025-10-07 00:51:57,664 | INFO     | did not find any defunct processes belonging to 31031
[2025-10-07 02:52:43] 2025-10-07 00:51:57,667 | INFO     | did not find any defunct processes belonging to 31031
[2025-10-07 02:52:43] 2025-10-07 00:51:57,668 | INFO     | ready for new job
[2025-10-07 02:52:43] 2025-10-07 00:51:57,668 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 02:52:43] 2025-10-07 00:51:57,670 | INFO     | ***************************************
[2025-10-07 02:52:43] 2025-10-07 00:51:57,670 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 02:52:43] 2025-10-07 00:51:57,670 | INFO     | ***************************************
[2025-10-07 02:52:43] 2025-10-07 00:51:57,670 | INFO     | 
[2025-10-07 02:52:43] 2025-10-07 00:51:57,671 | INFO     | pilot is running in a VM
[2025-10-07 02:52:43] 2025-10-07 00:51:57,671 | INFO     | architecture information:
[2025-10-07 02:52:43] 2025-10-07 00:51:57,695 | INFO     | executing command: cat /etc/os-release
[2025-10-07 02:52:43] 2025-10-07 00:51:58,024 | INFO     | cat /etc/os-release:
[2025-10-07 02:52:43] NAME="CentOS Linux"
[2025-10-07 02:52:43] VERSION="7 (Core)"
[2025-10-07 02:52:43] ID="centos"
[2025-10-07 02:52:43] ID_LIKE="rhel fedora"
[2025-10-07 02:52:43] VERSION_ID="7"
[2025-10-07 02:52:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 02:52:43] ANSI_COLOR="0;31"
[2025-10-07 02:52:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 02:52:43] HOME_URL="https://www.centos.org/"
[2025-10-07 02:52:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 02:52:43] 
[2025-10-07 02:52:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 02:52:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 02:52:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 02:52:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 02:52:43] 
[2025-10-07 02:52:43] 2025-10-07 00:51:58,024 | INFO     | ***************************************
[2025-10-07 02:52:43] 2025-10-07 00:51:58,527 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-07 02:52:43] 2025-10-07 00:51:58,724 | INFO     | sufficient remaining disk space (495995322368 B)
[2025-10-07 02:52:43] 2025-10-07 00:51:58,724 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 02:52:43] 2025-10-07 00:51:58,725 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 02:52:43] 2025-10-07 00:51:58,725 | INFO     | update_server=False
[2025-10-07 02:52:43] 2025-10-07 00:51:58,725 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 02:52:43] 2025-10-07 00:51:58,725 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 02:52:43] 2025-10-07 00:51:58,726 | INFO     | aborting loop
[2025-10-07 02:52:43] 2025-10-07 00:51:58,729 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 02:52:43] 2025-10-07 00:51:58,732 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 02:52:43] 2025-10-07 00:51:59,079 | INFO     | all data control threads have been joined
[2025-10-07 02:52:43] 2025-10-07 00:51:59,229 | INFO     | all payload control threads have been joined
[2025-10-07 02:52:43] 2025-10-07 00:51:59,728 | INFO     | all job control threads have been joined
[2025-10-07 02:52:43] 2025-10-07 00:51:59,731 | INFO     | [job] retrieve thread has finished
[2025-10-07 02:52:43] 2025-10-07 00:51:59,735 | INFO     | [job] job monitor thread has finished
[2025-10-07 02:52:43] 2025-10-07 00:51:59,960 | INFO     | [payload] validate_post thread has finished
[2025-10-07 02:52:43] 2025-10-07 00:52:00,020 | INFO     | [payload] failed_post thread has finished
[2025-10-07 02:52:43] 2025-10-07 00:52:00,085 | INFO     | [data] control thread has finished
[2025-10-07 02:52:43] 2025-10-07 00:52:00,093 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 02:52:43] 2025-10-07 00:52:00,096 | INFO     | [job] validate thread has finished
[2025-10-07 02:52:43] 2025-10-07 00:52:00,150 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 02:52:43] 2025-10-07 00:52:00,236 | INFO     | [payload] control thread has finished
[2025-10-07 02:52:43] 2025-10-07 00:52:00,735 | INFO     | [job] control thread has finished
[2025-10-07 02:52:43] 2025-10-07 00:52:00,742 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 02:52:43] 2025-10-07 00:52:00,742 | INFO     | [data] copytool_out thread has finished
[2025-10-07 02:52:43] 2025-10-07 00:52:00,859 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 02:52:43] 2025-10-07 00:52:01,104 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 02:52:43] 2025-10-07 00:52:01,172 | INFO     | [data] copytool_in thread has finished
[2025-10-07 02:52:43] 2025-10-07 00:52:01,748 | INFO     | [job] queue monitor thread has finished
[2025-10-07 02:52:43] 2025-10-07 00:52:02,737 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 02:52:43] 2025-10-07 00:52:27,991 | INFO     | PID=24449 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 02:52:43] 2025-10-07 00:52:27,997 | INFO     | .. there are 9 such processes running
[2025-10-07 02:52:43] 2025-10-07 00:52:27,997 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 02:52:43] 2025-10-07 00:52:27,997 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 02:52:43] 2025-10-07 00:52:27,997 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 02:52:43] 2025-10-07 00:52:34,217 | INFO     | [monitor] cgroup control has ended
[2025-10-07 02:52:43] 2025-10-07 00:52:34,662 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139857314867008)>', '<ExcThread(monitor, started 139856726443776)>']
[2025-10-07 02:52:43] 2025-10-07 00:52:35,043 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 02:52:43] 2025-10-07 00:52:35,044 | INFO     | [monitor] control thread has ended
[2025-10-07 02:52:43] 2025-10-07 00:52:39,687 | INFO     | all workflow threads have been joined
[2025-10-07 02:52:43] 2025-10-07 00:52:39,688 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 02:52:43] 2025-10-07 00:52:39,688 | INFO     | traces error code: 0
[2025-10-07 02:52:43] 2025-10-07 00:52:39,688 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 02:52:43] 2025-10-07 00:52:40,098 [wrapper] ==== pilot stdout END ====
[2025-10-07 02:52:43] 2025-10-07 00:52:40,128 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 02:52:43] 2025-10-07 00:52:40,157 [wrapper] pilotpid: 24449
[2025-10-07 02:52:43] 2025-10-07 00:52:40,183 [wrapper] Pilot exit status: 0
[2025-10-07 02:52:43] 2025-10-07 00:52:40,411 [wrapper] pandaids: 6831777354
[2025-10-07 02:52:43] 2025-10-07 00:52:40,854 [wrapper] cleanup supervisor_pilot 22835 24450
[2025-10-07 02:52:43] 2025-10-07 00:52:40,884 [wrapper] Test setup, not cleaning
[2025-10-07 02:52:43] 2025-10-07 00:52:40,957 [wrapper] apfmon messages muted
[2025-10-07 02:52:43] 2025-10-07 00:52:40,975 [wrapper] ==== wrapper stdout END ====
[2025-10-07 02:52:43] 2025-10-07 00:52:41,045 [wrapper] ==== wrapper stderr END ====
[2025-10-07 02:52:43]  *** Error codes and diagnostics ***
[2025-10-07 02:52:43]     "exeErrorCode": 0,
[2025-10-07 02:52:43]     "exeErrorDiag": "",
[2025-10-07 02:52:43]     "pilotErrorCode": 0,
[2025-10-07 02:52:43]     "pilotErrorDiag": "",
[2025-10-07 02:52:43]  *** Listing of results directory ***
[2025-10-07 02:52:43] total 389000
[2025-10-07 02:52:43] -rw-r--r--. 1 boinc boinc    552446 Oct  5 18:06 pilot3.tar.gz
[2025-10-07 02:52:43] -rw-r--r--. 1 boinc boinc      5112 Oct  5 18:59 queuedata.json
[2025-10-07 02:52:43] -rwx------. 1 boinc boinc     36292 Oct  5 19:00 runpilot2-wrapper.sh
[2025-10-07 02:52:43] -rw-r--r--. 1 boinc boinc       100 Oct  6 22:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 02:52:43] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 22:57 run_atlas
[2025-10-07 02:52:43] -rw-r--r--. 1 boinc boinc       105 Oct  6 22:57 job.xml
[2025-10-07 02:52:43] -rw-r--r--. 2 boinc boinc 215641825 Oct  6 22:57 EVNT.46376901._003343.pool.root.1
[2025-10-07 02:52:43] -rw-r--r--. 1 boinc boinc      6389 Oct  6 22:57 init_data.xml
[2025-10-07 02:52:43] -rw-r--r--. 2 boinc boinc     15120 Oct  6 22:57 start_atlas.sh
[2025-10-07 02:52:43] drwxrwx--x. 2 boinc boinc        68 Oct  6 22:57 shared
[2025-10-07 02:52:43] -rw-r--r--. 2 boinc boinc    565602 Oct  6 22:57 input.tar.gz
[2025-10-07 02:52:43] -rw-r--r--. 1 boinc boinc         0 Oct  6 22:57 boinc_lockfile
[2025-10-07 02:52:43] -rw-r--r--. 1 boinc boinc      2519 Oct  6 22:57 pandaJob.out
[2025-10-07 02:52:43] -rw-------. 1 boinc boinc    975026 Oct  6 23:01 agis_schedconf.cvmfs.json
[2025-10-07 02:52:43] drwx------. 4 boinc boinc      4096 Oct  6 23:01 pilot3
[2025-10-07 02:52:43] -rw-------. 1 boinc boinc 174206991 Oct  7 02:49 HITS.46376905._090782.pool.root.1
[2025-10-07 02:52:43] -rw-r--r--. 1 boinc boinc       531 Oct  7 02:49 boinc_task_state.xml
[2025-10-07 02:52:43] -rw-------. 1 boinc boinc      1013 Oct  7 02:50 memory_monitor_summary.json
[2025-10-07 02:52:43] -rw-------. 1 boinc boinc   1560401 Oct  7 02:50 agis_ddmendpoints.agis.ALL.json
[2025-10-07 02:52:43] -rw-------. 1 boinc boinc    461889 Oct  7 02:50 log.46376905._090782.job.log.tgz.1
[2025-10-07 02:52:43] -rw-------. 1 boinc boinc        95 Oct  7 02:51 pilot_heartbeat.json
[2025-10-07 02:52:43] -rw-------. 1 boinc boinc      7787 Oct  7 02:51 heartbeat.json
[2025-10-07 02:52:43] -rw-r--r--. 1 boinc boinc      8192 Oct  7 02:52 boinc_mmap_file
[2025-10-07 02:52:43] -rw-r--r--. 1 boinc boinc        28 Oct  7 02:52 wrapper_checkpoint.txt
[2025-10-07 02:52:43] -rw-------. 1 boinc boinc      4884 Oct  7 02:52 pilotlog.txt
[2025-10-07 02:52:43] -rw-------. 1 boinc boinc   1844982 Oct  7 02:52 log.46376905._090782.job.log.1
[2025-10-07 02:52:43] -rw-------. 1 boinc boinc       357 Oct  7 02:52 output.list
[2025-10-07 02:52:43] -rw-r--r--. 1 boinc boinc       620 Oct  7 02:52 runtime_log
[2025-10-07 02:52:43] -rw-------. 1 boinc boinc   2324480 Oct  7 02:52 result.tar.gz
[2025-10-07 02:52:43] -rw-r--r--. 1 boinc boinc      8703 Oct  7 02:52 runtime_log.err
[2025-10-07 02:52:43] -rw-------. 1 boinc boinc       657 Oct  7 02:52 3veMDmFHhP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBJQNDmsv0ZQm.diag
[2025-10-07 02:52:43] -rw-r--r--. 1 boinc boinc     20543 Oct  7 02:52 stderr.txt
[2025-10-07 02:52:43] HITS file was successfully produced:
[2025-10-07 02:52:43] -rw-------. 1 boinc boinc 174206991 Oct  7 02:49 shared/HITS.pool.root.1
[2025-10-07 02:52:43]  *** Contents of shared directory: ***
[2025-10-07 02:52:43] total 383560
[2025-10-07 02:52:43] -rw-r--r--. 2 boinc boinc 215641825 Oct  6 22:57 ATLAS.root_0
[2025-10-07 02:52:43] -rw-r--r--. 2 boinc boinc     15120 Oct  6 22:57 start_atlas.sh
[2025-10-07 02:52:43] -rw-r--r--. 2 boinc boinc    565602 Oct  6 22:57 input.tar.gz
[2025-10-07 02:52:43] -rw-------. 1 boinc boinc 174206991 Oct  7 02:49 HITS.pool.root.1
[2025-10-07 02:52:43] -rw-------. 1 boinc boinc   2324480 Oct  7 02:52 result.tar.gz
02:52:44 (20642): run_atlas exited; CPU time 48269.314465
02:52:44 (20642): called boinc_finish(0)

</stderr_txt>
]]>

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