Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:39:26 (3230812): wrapper (7.7.26015): starting
16:39:26 (3230812): wrapper: running run_atlas (--nthreads 12)
[2025-10-05 16:39:26] Arguments: --nthreads 12
[2025-10-05 16:39:26] Threads: 12
[2025-10-05 16:39:26] Checking for CVMFS
[2025-10-05 16:39:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-05 16:39:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-05 16:39:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-05 16:39:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-05 16:39:26] 2.11.5.0 2672 22086 207676 151379 2 201 44934798 45568001 9293 130560 0 204608368 99.845 97597260 25234 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-05 16:39:26] CVMFS is ok
[2025-10-05 16:39:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-05 16:39:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-05 16:39:26] Further information can be found at the LHC@home message board.
[2025-10-05 16:39:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-05 16:39:26] Checking for apptainer binary...
[2025-10-05 16:39:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-05 16:39:26] Running /usr/bin/apptainer --version
[2025-10-05 16:39:26] apptainer version 1.4.1-1.el9
[2025-10-05 16:39:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-05 16:39:26] wns0046.triumf.lcg
[2025-10-05 16:39:26] apptainer works
[2025-10-05 16:39:26] Set ATHENA_PROC_NUMBER=12
[2025-10-05 16:39:26] Set ATHENA_CORE_NUMBER=12
[2025-10-05 16:39:26] Starting ATLAS job with PandaID=6832047990
[2025-10-05 16:39:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-05 16:42:45]  *** The last 200 lines of the pilot log: ***
[2025-10-05 16:42:45] 2025-10-05 23:42:14,146 | WARNING  | found no stored workdir sizes
[2025-10-05 16:42:45] 2025-10-05 23:42:14,146 | INFO     | will not add max space = 0 B to job metrics
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | WARNING  | wrong length of table data, x=[1759707600.0], y=[1279.0] (must be same and length>=4)
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | could have reported an average CPU frequency of 2718 MHz (4 samples)
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | ..............................
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . Timing measurements:
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . get job = 0 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . initial setup = 3 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . payload setup = 4 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . stage-in = 0 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . payload execution = 15 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . stage-out = 0 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . log creation = 0 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | ..............................
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832047990/pilotlog.txt
[2025-10-05 16:42:45] 2025-10-05 23:42:14,158 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-05 16:42:45] - Log from pilotlog.txt -
[2025-10-05 16:42:45] 2025-10-05 23:42:14,145 | INFO     | extracted standard memory fields from prmon json
[2025-10-05 16:42:45] 2025-10-05 23:42:14,145 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-05 16:42:45] 2025-10-05 23:42:14,146 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 16:42:45] 2025-10-05 23:42:14,146 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 16:42:45] 2025-10-05 23:42:14,146 | WARNING  | found no stored workdir sizes
[2025-10-05 16:42:45] 2025-10-05 23:42:14,146 | INFO     | will not add max space = 0 B to job metrics
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | WARNING  | wrong length of table data, x=[1759707600.0], y=[1279.0] (must be same and length>=4)
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | could have reported an average CPU frequency of 2718 MHz (4 samples)
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | ..............................
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . Timing measurements:
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . get job = 0 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . initial setup = 3 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . payload setup = 4 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . stage-in = 0 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . payload execution = 15 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . stage-out = 0 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . log creation = 0 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | ..............................
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832047990/pilotlog.txt
[2025-10-05 16:42:45] 2025-10-05 23:42:14,158 | WARNING  | 
[2025-10-05 16:42:45] [begin log extracts]
[2025-10-05 16:42:45] - Log from pilotlog.txt -
[2025-10-05 16:42:45] 2025-10-05 23:42:14,145 | INFO     | extracted standard memory fields from prmon json
[2025-10-05 16:42:45] 2025-10-05 23:42:14,145 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-05 16:42:45] 2025-10-05 23:42:14,146 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 16:42:45] 2025-10-05 23:42:14,146 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 16:42:45] 2025-10-05 23:42:14,146 | WARNING  | found no stored workdir sizes
[2025-10-05 16:42:45] 2025-10-05 23:42:14,146 | INFO     | will not add max space = 0 B to job metrics
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | WARNING  | wrong length of table data, x=[1759707600.0], y=[1279.0] (must be same and length>=4)
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | could have reported an average CPU frequency of 2718 MHz (4 samples)
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | ..............................
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . Timing measurements:
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . get job = 0 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . initial setup = 3 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . payload setup = 4 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . stage-in = 0 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . payload execution = 15 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . stage-out = 0 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | . log creation = 0 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | ..............................
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-05 16:42:45] 2025-10-05 23:42:14,147 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832047990/pilotlog.txt
[2025-10-05 16:42:45] [end log extracts]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,158 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-05 16:42:45] 2025-10-05 23:42:14,159 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-05 16:42:45] 2025-10-05 23:42:14,220 | INFO     | 
[2025-10-05 16:42:45] 2025-10-05 23:42:14,220 | INFO     | job summary report
[2025-10-05 16:42:45] 2025-10-05 23:42:14,220 | INFO     | --------------------------------------------------
[2025-10-05 16:42:45] 2025-10-05 23:42:14,220 | INFO     | PanDA job id: 6832047990
[2025-10-05 16:42:45] 2025-10-05 23:42:14,220 | INFO     | task id: 46376905
[2025-10-05 16:42:45] 2025-10-05 23:42:14,220 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-05 16:40:07,455 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-05 16:42:45] 2025-10-05 23:42:14,220 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-05 16:42:45] 2025-10-05 23:42:14,220 | INFO     | pilot state: failed 
[2025-10-05 16:42:45] 2025-10-05 23:42:14,220 | INFO     | transexitcode: 65
[2025-10-05 16:42:45] 2025-10-05 23:42:14,220 | INFO     | exeerrorcode: 65
[2025-10-05 16:42:45] 2025-10-05 23:42:14,220 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-05 16:42:45] 2025-10-05 23:42:14,220 | INFO     | exitcode: 65
[2025-10-05 16:42:45] 2025-10-05 23:42:14,220 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-05 16:42:45] 2025-10-05 23:42:14,220 | INFO     | cpuconsumptiontime: 16 s
[2025-10-05 16:42:45] 2025-10-05 23:42:14,220 | INFO     | nevents: 0
[2025-10-05 16:42:45] 2025-10-05 23:42:14,221 | INFO     | neventsw: 0
[2025-10-05 16:42:45] 2025-10-05 23:42:14,221 | INFO     | pid: 3241019
[2025-10-05 16:42:45] 2025-10-05 23:42:14,221 | INFO     | pgrp: 3241019
[2025-10-05 16:42:45] 2025-10-05 23:42:14,221 | INFO     | corecount: 12
[2025-10-05 16:42:45] 2025-10-05 23:42:14,221 | INFO     | event service: False
[2025-10-05 16:42:45] 2025-10-05 23:42:14,221 | INFO     | sizes: {0: 2348811, 4: 2349073, 11: 2349101, 23: 2372241, 24: 2376561, 143: 2376699}
[2025-10-05 16:42:45] 2025-10-05 23:42:14,221 | INFO     | --------------------------------------------------
[2025-10-05 16:42:45] 2025-10-05 23:42:14,221 | INFO     | 
[2025-10-05 16:42:45] 2025-10-05 23:42:14,221 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-05 16:42:45] 2025-10-05 23:42:14,235 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,236 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,236 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,236 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,236 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,236 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,236 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,237 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,237 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,237 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-05 16:42:45] 2025-10-05 23:42:14,237 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,237 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-05 16:42:45] 2025-10-05 23:42:14,237 | INFO     | job 6832047990 has completed (purged errors)
[2025-10-05 16:42:45] 2025-10-05 23:42:14,237 | INFO     | overall cleanup function is called
[2025-10-05 16:42:45] 2025-10-05 23:42:15,243 | INFO     | --- collectZombieJob: --- 10, [3241019]
[2025-10-05 16:42:45] 2025-10-05 23:42:15,243 | INFO     | zombie collector waiting for pid 3241019
[2025-10-05 16:42:45] 2025-10-05 23:42:15,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-05 16:42:45] 2025-10-05 23:42:15,244 | INFO     | collected zombie processes
[2025-10-05 16:42:45] 2025-10-05 23:42:15,244 | INFO     | will attempt to kill all subprocesses of pid=3241019
[2025-10-05 16:42:45] 2025-10-05 23:42:15,398 | INFO     | process IDs to be killed: [3241019] (in reverse order)
[2025-10-05 16:42:45] 2025-10-05 23:42:15,456 | WARNING  | found no corresponding commands to process id(s)
[2025-10-05 16:42:45] 2025-10-05 23:42:15,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-05 16:42:45] 2025-10-05 23:42:15,463 | INFO     | did not find any defunct processes belonging to 3241019
[2025-10-05 16:42:45] 2025-10-05 23:42:15,468 | INFO     | did not find any defunct processes belonging to 3241019
[2025-10-05 16:42:45] 2025-10-05 23:42:15,469 | INFO     | ready for new job
[2025-10-05 16:42:45] 2025-10-05 23:42:15,469 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-05 16:42:45] 2025-10-05 23:42:15,470 | INFO     | ***************************************
[2025-10-05 16:42:45] 2025-10-05 23:42:15,470 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-05 16:42:45] 2025-10-05 23:42:15,470 | INFO     | ***************************************
[2025-10-05 16:42:45] 2025-10-05 23:42:15,471 | INFO     | 
[2025-10-05 16:42:45] 2025-10-05 23:42:15,472 | INFO     | architecture information:
[2025-10-05 16:42:45] 2025-10-05 23:42:15,473 | INFO     | executing command: cat /etc/os-release
[2025-10-05 16:42:45] 2025-10-05 23:42:15,485 | INFO     | cat /etc/os-release:
[2025-10-05 16:42:45] NAME="CentOS Linux"
[2025-10-05 16:42:45] VERSION="7 (Core)"
[2025-10-05 16:42:45] ID="centos"
[2025-10-05 16:42:45] ID_LIKE="rhel fedora"
[2025-10-05 16:42:45] VERSION_ID="7"
[2025-10-05 16:42:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-05 16:42:45] ANSI_COLOR="0;31"
[2025-10-05 16:42:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-05 16:42:45] HOME_URL="https://www.centos.org/"
[2025-10-05 16:42:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-05 16:42:45] 
[2025-10-05 16:42:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-05 16:42:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-05 16:42:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-05 16:42:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-05 16:42:45] 
[2025-10-05 16:42:45] 2025-10-05 23:42:15,485 | INFO     | ***************************************
[2025-10-05 16:42:45] 2025-10-05 23:42:15,990 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-05 16:42:45] 2025-10-05 23:42:16,003 | INFO     | sufficient remaining disk space (2192502161408 B)
[2025-10-05 16:42:45] 2025-10-05 23:42:16,003 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-05 16:42:45] 2025-10-05 23:42:16,003 | INFO     | current server update state: UPDATING_FINAL
[2025-10-05 16:42:45] 2025-10-05 23:42:16,003 | INFO     | update_server=False
[2025-10-05 16:42:45] 2025-10-05 23:42:16,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-05 16:42:45] 2025-10-05 23:42:16,003 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-05 16:42:45] 2025-10-05 23:42:16,004 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-05 16:42:45] 2025-10-05 23:42:16,381 | INFO     | all job control threads have been joined
[2025-10-05 16:42:45] 2025-10-05 23:42:16,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-05 16:42:45] 2025-10-05 23:42:16,536 | INFO     | aborting loop
[2025-10-05 16:42:45] 2025-10-05 23:42:16,947 | INFO     | all payload control threads have been joined
[2025-10-05 16:42:45] 2025-10-05 23:42:17,008 | INFO     | [job] queue monitor thread has finished
[2025-10-05 16:42:45] 2025-10-05 23:42:17,009 | INFO     | [job] retrieve thread has finished
[2025-10-05 16:42:45] 2025-10-05 23:42:17,070 | INFO     | all data control threads have been joined
[2025-10-05 16:42:45] 2025-10-05 23:42:17,147 | INFO     | [payload] execute_payloads thread has finished
[2025-10-05 16:42:45] 2025-10-05 23:42:17,344 | INFO     | [payload] failed_post thread has finished
[2025-10-05 16:42:45] 2025-10-05 23:42:17,387 | INFO     | [job] control thread has finished
[2025-10-05 16:42:45] 2025-10-05 23:42:17,433 | INFO     | [data] copytool_in thread has finished
[2025-10-05 16:42:45] 2025-10-05 23:42:17,540 | INFO     | [job] job monitor thread has finished
[2025-10-05 16:42:45] 2025-10-05 23:42:17,930 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-05 16:42:45] 2025-10-05 23:42:17,945 | INFO     | [job] validate thread has finished
[2025-10-05 16:42:45] 2025-10-05 23:42:17,952 | INFO     | [payload] control thread has finished
[2025-10-05 16:42:45] 2025-10-05 23:42:18,009 | INFO     | [data] copytool_out thread has finished
[2025-10-05 16:42:45] 2025-10-05 23:42:18,075 | INFO     | [data] control thread has finished
[2025-10-05 16:42:45] 2025-10-05 23:42:18,096 | INFO     | [job] create_data_payload thread has finished
[2025-10-05 16:42:45] 2025-10-05 23:42:18,227 | INFO     | [payload] validate_pre thread has finished
[2025-10-05 16:42:45] 2025-10-05 23:42:18,292 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-05 16:42:45] 2025-10-05 23:42:18,484 | INFO     | [payload] validate_post thread has finished
[2025-10-05 16:42:45] 2025-10-05 23:42:21,939 | INFO     | [data] queue_monitor thread has finished
[2025-10-05 16:42:45] 2025-10-05 23:42:35,678 | INFO     | [monitor] cgroup control has ended
[2025-10-05 16:42:45] 2025-10-05 23:42:37,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350267995968)>', '<ExcThread(monitor, started 140349590726400)>']
[2025-10-05 16:42:45] 2025-10-05 23:42:42,619 | INFO     | all workflow threads have been joined
[2025-10-05 16:42:45] 2025-10-05 23:42:42,619 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-05 16:42:45] 2025-10-05 23:42:42,620 | INFO     | traces error code: 0
[2025-10-05 16:42:45] 2025-10-05 23:42:42,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-05 16:42:45] 2025-10-05 23:42:45,586 | INFO     | PID=3234454 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-05 16:42:45] 2025-10-05 23:42:45,586 | INFO     | .. there are 21 such processes running
[2025-10-05 16:42:45] 2025-10-05 23:42:45,587 | INFO     | found 0 job(s) in 20 queues
[2025-10-05 16:42:45] 2025-10-05 23:42:45,587 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-05 16:42:45] 2025-10-05 23:42:45,587 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-05 16:42:45] 2025-10-05 23:42:45,587 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-05 16:42:45] 2025-10-05 23:42:45,587 | CRITICAL | thread 'MainThread' is not alive
[2025-10-05 16:42:45] 2025-10-05 23:42:45,587 | INFO     | [monitor] control thread has ended
[2025-10-05 16:42:45] 2025-10-05 23:42:45,710 [wrapper] ==== pilot stdout END ====
[2025-10-05 16:42:45] 2025-10-05 23:42:45,713 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-05 16:42:45] 2025-10-05 23:42:45,715 [wrapper] pilotpid: 3234454
[2025-10-05 16:42:45] 2025-10-05 23:42:45,717 [wrapper] Pilot exit status: 0
[2025-10-05 16:42:45] 2025-10-05 23:42:45,726 [wrapper] pandaids: 6832047990
[2025-10-05 16:42:45] 2025-10-05 23:42:45,765 [wrapper] cleanup supervisor_pilot 3234460 3234455
[2025-10-05 16:42:45] 2025-10-05 23:42:45,767 [wrapper] Test setup, not cleaning
[2025-10-05 16:42:45] 2025-10-05 23:42:45,770 [wrapper] apfmon messages muted
[2025-10-05 16:42:45] 2025-10-05 23:42:45,772 [wrapper] ==== wrapper stdout END ====
[2025-10-05 16:42:45] 2025-10-05 23:42:45,774 [wrapper] ==== wrapper stderr END ====
[2025-10-05 16:42:45]  *** Error codes and diagnostics ***
[2025-10-05 16:42:45]     "exeErrorCode": 65,
[2025-10-05 16:42:45]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-05 16:42:45]     "pilotErrorCode": 1305,
[2025-10-05 16:42:45]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-05 16:42:45]  *** Listing of results directory ***
[2025-10-05 16:42:45] total 216220
[2025-10-05 16:42:45] -rw-r--r--. 1 boinc boinc      5112 Oct  5 15:14 queuedata.json
[2025-10-05 16:42:45] -rw-r--r--. 1 boinc boinc    552446 Oct  5 15:14 pilot3.tar.gz
[2025-10-05 16:42:45] -rwx------. 1 boinc boinc     36292 Oct  5 15:14 runpilot2-wrapper.sh
[2025-10-05 16:42:45] -rw-r--r--. 1 boinc boinc       100 Oct  5 16:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-05 16:42:45] -rwxr-xr-x. 1 boinc boinc      7986 Oct  5 16:39 run_atlas
[2025-10-05 16:42:45] -rw-r--r--. 1 boinc boinc       105 Oct  5 16:39 job.xml
[2025-10-05 16:42:45] -rw-r--r--. 1 boinc boinc      6594 Oct  5 16:39 init_data.xml
[2025-10-05 16:42:45] -rw-r--r--. 2 boinc boinc 217327006 Oct  5 16:39 EVNT.46376901._003607.pool.root.1
[2025-10-05 16:42:45] -rw-r--r--. 2 boinc boinc     15120 Oct  5 16:39 start_atlas.sh
[2025-10-05 16:42:45] drwxrwx--x. 2 boinc boinc      4096 Oct  5 16:39 shared
[2025-10-05 16:42:45] -rw-r--r--. 2 boinc boinc    565594 Oct  5 16:39 input.tar.gz
[2025-10-05 16:42:45] -rw-r--r--. 1 boinc boinc         0 Oct  5 16:39 boinc_lockfile
[2025-10-05 16:42:45] -rw-r--r--. 1 boinc boinc      2518 Oct  5 16:39 pandaJob.out
[2025-10-05 16:42:45] -rw-------. 1 boinc boinc    974144 Oct  5 16:39 agis_schedconf.cvmfs.json
[2025-10-05 16:42:45] -rw-------. 1 boinc boinc   1560401 Oct  5 16:39 agis_ddmendpoints.agis.ALL.json
[2025-10-05 16:42:45] drwx------. 4 boinc boinc      4096 Oct  5 16:39 pilot3
[2025-10-05 16:42:45] -rw-r--r--. 1 boinc boinc       522 Oct  5 16:40 boinc_task_state.xml
[2025-10-05 16:42:45] -rw-------. 1 boinc boinc       946 Oct  5 16:40 memory_monitor_summary.json
[2025-10-05 16:42:45] -rw-------. 1 boinc boinc     20871 Oct  5 16:40 log.46376905._097701.job.log.tgz.1
[2025-10-05 16:42:45] -rw-------. 1 boinc boinc      8375 Oct  5 16:42 heartbeat.json
[2025-10-05 16:42:45] -rw-r--r--. 1 boinc boinc      8192 Oct  5 16:42 boinc_mmap_file
[2025-10-05 16:42:45] -rw-r--r--. 1 boinc boinc        22 Oct  5 16:42 wrapper_checkpoint.txt
[2025-10-05 16:42:45] -rw-------. 1 boinc boinc       893 Oct  5 16:42 pilotlog.txt
[2025-10-05 16:42:45] -rw-------. 1 boinc boinc        95 Oct  5 16:42 pilot_heartbeat.json
[2025-10-05 16:42:45] -rw-------. 1 boinc boinc     81572 Oct  5 16:42 log.46376905._097701.job.log.1
[2025-10-05 16:42:45] -rw-------. 1 boinc boinc       188 Oct  5 16:42 output.list
[2025-10-05 16:42:45] -rw-r--r--. 1 boinc boinc       620 Oct  5 16:42 runtime_log
[2025-10-05 16:42:45] -rw-------. 1 boinc boinc    122880 Oct  5 16:42 result.tar.gz
[2025-10-05 16:42:45] -rw-r--r--. 1 boinc boinc      8528 Oct  5 16:42 runtime_log.err
[2025-10-05 16:42:45] -rw-------. 1 boinc boinc       644 Oct  5 16:42 Mu8LDmgAmP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmchHMDmJdSbzn.diag
[2025-10-05 16:42:45] -rw-r--r--. 1 boinc boinc     21610 Oct  5 16:42 stderr.txt
[2025-10-05 16:42:45] No HITS result produced
[2025-10-05 16:42:45]  *** Contents of shared directory: ***
[2025-10-05 16:42:45] total 212928
[2025-10-05 16:42:45] -rw-r--r--. 2 boinc boinc 217327006 Oct  5 16:39 ATLAS.root_0
[2025-10-05 16:42:45] -rw-r--r--. 2 boinc boinc     15120 Oct  5 16:39 start_atlas.sh
[2025-10-05 16:42:45] -rw-r--r--. 2 boinc boinc    565594 Oct  5 16:39 input.tar.gz
[2025-10-05 16:42:45] -rw-------. 1 boinc boinc    122880 Oct  5 16:42 result.tar.gz
16:42:47 (3230812): run_atlas exited; CPU time 21.011480
16:42:47 (3230812): called boinc_finish(0)

</stderr_txt>
]]>

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