Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:28:52 (20993): wrapper (7.7.26015): starting
19:28:52 (20993): wrapper: running run_atlas (--nthreads 8)
[2025-10-05 19:28:52] Arguments: --nthreads 8
[2025-10-05 19:28:52] Threads: 8
[2025-10-05 19:28:52] Checking for CVMFS
[2025-10-05 19:28:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-05 19:28:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-05 19:28:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-05 19:28:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-05 19:28:53] 2.11.2.0 2871 186314 85612 151379 3 56 12521408 20275200 1 130560 1 66210546 99.979 7607467 26968 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-05 19:28:53] CVMFS is ok
[2025-10-05 19:28:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-05 19:28:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-05 19:28:53] Further information can be found at the LHC@home message board.
[2025-10-05 19:28:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-05 19:28:53] Checking for apptainer binary...
[2025-10-05 19:28:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-05 19:28:53] Running /usr/bin/apptainer --version
[2025-10-05 19:28:53] apptainer version 1.3.2-1.el7
[2025-10-05 19:28:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-05 19:28:55] c-115-7.aglt2.org
[2025-10-05 19:28:55] apptainer works
[2025-10-05 19:28:55] Set ATHENA_PROC_NUMBER=8
[2025-10-05 19:28:55] Set ATHENA_CORE_NUMBER=8
[2025-10-05 19:28:55] Starting ATLAS job with PandaID=6831776719
[2025-10-05 19:28:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-05 21:09:27]  *** The last 200 lines of the pilot log: ***
[2025-10-05 21:09:27]  protocol_id=None
[2025-10-05 21:09:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-05 21:09:27]  replicas=None
[2025-10-05 21:09:27]  scope=mc23_13p6TeV
[2025-10-05 21:09:27]  status=None
[2025-10-05 21:09:27]  status_code=0
[2025-10-05 21:09:27]  storage_token=
[2025-10-05 21:09:27]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6831776719/log.46376905._090423.job.log.tgz.1
[2025-10-05 21:09:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/d1/log.46376905._090423.job.log.tgz.1
[2025-10-05 21:09:27]  workdir=None
[2025-10-05 21:09:27] ]
[2025-10-05 21:09:27] 2025-10-06 01:08:18,082 | INFO     | transferring file log.46376905._090423.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6831776719/log.46376905._090423.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-05 21:09:27] 2025-10-06 01:08:18,082 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6831776719/log.46376905._090423.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._090423.job
[2025-10-05 21:09:27] 2025-10-06 01:08:18,107 | INFO     | adding to output.list: log.46376905._090423.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/d1/log.46376905._090423.job.log.tg
[2025-10-05 21:09:27] 2025-10-06 01:08:18,108 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-05 21:09:27] 2025-10-06 01:08:18,109 | INFO     | summary of transferred files:
[2025-10-05 21:09:27] 2025-10-06 01:08:18,109 | INFO     |  -- lfn=log.46376905._090423.job.log.tgz.1, status_code=0, status=transferred
[2025-10-05 21:09:27] 2025-10-06 01:08:18,109 | INFO     | stage-out finished correctly
[2025-10-05 21:09:27] 2025-10-06 01:08:18,798 | INFO     | time since job start (5946s) is within the limit (172800.0s)
[2025-10-05 21:09:27] 2025-10-06 01:08:19,031 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-05 21:09:27] 2025-10-06 01:08:19,192 | INFO     | job 6831776719 has state=finished
[2025-10-05 21:09:27] 2025-10-06 01:08:19,192 | INFO     | preparing for final server update for job 6831776719 in state='finished'
[2025-10-05 21:09:27] 2025-10-06 01:08:19,193 | INFO     | this job has now completed (state=finished)
[2025-10-05 21:09:27] 2025-10-06 01:08:19,193 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-05 21:09:27] 2025-10-06 01:08:19,193 | INFO     | log transfer has been attempted: DONE
[2025-10-05 21:09:27] 2025-10-06 01:08:19,193 | INFO     | job 6831776719 has finished - writing final server update
[2025-10-05 21:09:27] 2025-10-06 01:08:19,194 | INFO     | total number of processed events: 400 (read)
[2025-10-05 21:09:27] 2025-10-06 01:08:19,195 | INFO     | executing command: lscpu
[2025-10-05 21:09:27] 2025-10-06 01:08:19,221 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-05 21:09:27] 2025-10-06 01:08:20,804 | INFO     | time since job start (5948s) is within the limit (172800.0s)
[2025-10-05 21:09:27] 2025-10-06 01:08:21,897 | WARNING  | process 31163 can no longer be monitored (due to stat problems) - aborting
[2025-10-05 21:09:27] 2025-10-06 01:08:21,898 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6831776719/memory_monitor_summary.json (trf name=prmon)
[2025-10-05 21:09:27] 2025-10-06 01:08:21,995 | INFO     | number of running child processes to parent process 31163: 1
[2025-10-05 21:09:27] 2025-10-06 01:08:21,995 | INFO     | maximum number of monitored processes: 6
[2025-10-05 21:09:27] 2025-10-06 01:08:22,810 | INFO     | time since job start (5950s) is within the limit (172800.0s)
[2025-10-05 21:09:27] 2025-10-06 01:08:24,498 | INFO     | monitor loop #439: job 0:6831776719 is in state 'finished'
[2025-10-05 21:09:27] 2025-10-06 01:08:24,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-05 21:09:27] 2025-10-06 01:08:24,638 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-05 21:09:27] 2025-10-06 01:08:24,641 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-10-05 21:09:27] 2025-10-06 01:08:24,642 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6831776719/memory_monitor_summary.json (trf name=prmon)
[2025-10-05 21:09:27] 2025-10-06 01:08:24,642 | INFO     | extracted standard info from prmon json
[2025-10-05 21:09:27] 2025-10-06 01:08:24,642 | INFO     | extracted standard memory fields from prmon json
[2025-10-05 21:09:27] 2025-10-06 01:08:24,643 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-05 21:09:27] 2025-10-06 01:08:24,643 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 21:09:27] 2025-10-06 01:08:24,643 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 21:09:27] 2025-10-06 01:08:24,645 | INFO     | fitting pss+swap vs Time
[2025-10-05 21:09:27] 2025-10-06 01:08:24,645 | INFO     | sum of square deviations: 226022842.5
[2025-10-05 21:09:27] 2025-10-06 01:08:24,645 | INFO     | sum of deviations: -15995387913.999998
[2025-10-05 21:09:27] 2025-10-06 01:08:24,646 | INFO     | mean x: 1759710001.5
[2025-10-05 21:09:27] 2025-10-06 01:08:24,646 | INFO     | mean y: 2650899.6
[2025-10-05 21:09:27] 2025-10-06 01:08:24,646 | INFO     | -- intersect: 124535391833.24268
[2025-10-05 21:09:27] 2025-10-06 01:08:24,646 | INFO     | intersect: 124535391833.24268
[2025-10-05 21:09:27] 2025-10-06 01:08:24,646 | INFO     | chi2: 0.08440697358542235
[2025-10-05 21:09:27] 2025-10-06 01:08:24,646 | INFO     | -- intersect: 124535391833.24268
[2025-10-05 21:09:27] 2025-10-06 01:08:24,646 | INFO     | current memory leak: -70.77 B/s (using 90 data points, chi2=0.08)
[2025-10-05 21:09:27] 2025-10-06 01:08:24,647 | INFO     | could have reported an average CPU frequency of 2097 MHz (7 samples)
[2025-10-05 21:09:27] 2025-10-06 01:08:24,647 | INFO     | ..............................
[2025-10-05 21:09:27] 2025-10-06 01:08:24,647 | INFO     | . Timing measurements:
[2025-10-05 21:09:27] 2025-10-06 01:08:24,647 | INFO     | . get job = 0 s
[2025-10-05 21:09:27] 2025-10-06 01:08:24,647 | INFO     | . initial setup = 2 s
[2025-10-05 21:09:27] 2025-10-06 01:08:24,647 | INFO     | . payload setup = 8 s
[2025-10-05 21:09:27] 2025-10-06 01:08:24,647 | INFO     | . stage-in = 0 s
[2025-10-05 21:09:27] 2025-10-06 01:08:24,648 | INFO     | . payload execution = 5916 s
[2025-10-05 21:09:27] 2025-10-06 01:08:24,648 | INFO     | . stage-out = 0 s
[2025-10-05 21:09:27] 2025-10-06 01:08:24,648 | INFO     | . log creation = 0 s
[2025-10-05 21:09:27] 2025-10-06 01:08:24,648 | INFO     | ..............................
[2025-10-05 21:09:27] 2025-10-06 01:08:24,730 | INFO     | 
[2025-10-05 21:09:27] 2025-10-06 01:08:24,731 | INFO     | job summary report
[2025-10-05 21:09:27] 2025-10-06 01:08:24,731 | INFO     | --------------------------------------------------
[2025-10-05 21:09:27] 2025-10-06 01:08:24,731 | INFO     | PanDA job id: 6831776719
[2025-10-05 21:09:27] 2025-10-06 01:08:24,731 | INFO     | task id: 46376905
[2025-10-05 21:09:27] 2025-10-06 01:08:24,732 | INFO     | errors: (none)
[2025-10-05 21:09:27] 2025-10-06 01:08:24,732 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-05 21:09:27] 2025-10-06 01:08:24,732 | INFO     | pilot state: finished 
[2025-10-05 21:09:27] 2025-10-06 01:08:24,732 | INFO     | transexitcode: 0
[2025-10-05 21:09:27] 2025-10-06 01:08:24,732 | INFO     | exeerrorcode: 0
[2025-10-05 21:09:27] 2025-10-06 01:08:24,732 | INFO     | exeerrordiag: 
[2025-10-05 21:09:27] 2025-10-06 01:08:24,733 | INFO     | exitcode: 0
[2025-10-05 21:09:27] 2025-10-06 01:08:24,733 | INFO     | exitmsg: OK
[2025-10-05 21:09:27] 2025-10-06 01:08:24,733 | INFO     | cpuconsumptiontime: 43975 s
[2025-10-05 21:09:27] 2025-10-06 01:08:24,733 | INFO     | nevents: 400
[2025-10-05 21:09:27] 2025-10-06 01:08:24,733 | INFO     | neventsw: 0
[2025-10-05 21:09:27] 2025-10-06 01:08:24,733 | INFO     | pid: 31163
[2025-10-05 21:09:27] 2025-10-06 01:08:24,734 | INFO     | pgrp: 31163
[2025-10-05 21:09:27] 2025-10-06 01:08:24,734 | INFO     | corecount: 8
[2025-10-05 21:09:27] 2025-10-06 01:08:24,734 | INFO     | event service: False
[2025-10-05 21:09:27] 2025-10-06 01:08:24,734 | INFO     | sizes: {0: 2347988, 1: 2348844, 7: 2349106, 12: 2349134, 5928: 2375830, 5929: 2384828, 5930: 2385012, 5936: 2385206}
[2025-10-05 21:09:27] 2025-10-06 01:08:24,734 | INFO     | --------------------------------------------------
[2025-10-05 21:09:27] 2025-10-06 01:08:24,734 | INFO     | 
[2025-10-05 21:09:27] 2025-10-06 01:08:24,735 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-05 21:09:27] 2025-10-06 01:08:24,761 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-05 21:09:27] 2025-10-06 01:08:24,761 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-05 21:09:27] 2025-10-06 01:08:24,761 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-05 21:09:27] 2025-10-06 01:08:24,762 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-05 21:09:27] 2025-10-06 01:08:24,762 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-05 21:09:27] 2025-10-06 01:08:24,762 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-05 21:09:27] 2025-10-06 01:08:24,762 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-05 21:09:27] 2025-10-06 01:08:24,762 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-05 21:09:27] 2025-10-06 01:08:24,763 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-05 21:09:27] 2025-10-06 01:08:24,763 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-05 21:09:27] 2025-10-06 01:08:24,763 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-05 21:09:27] 2025-10-06 01:08:24,763 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-05 21:09:27] 2025-10-06 01:08:24,763 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-05 21:09:27] 2025-10-06 01:08:24,764 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-05 21:09:27] 2025-10-06 01:08:24,764 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-05 21:09:27] 2025-10-06 01:08:24,764 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-05 21:09:27] 2025-10-06 01:08:24,764 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-05 21:09:27] 2025-10-06 01:08:24,764 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-05 21:09:27] 2025-10-06 01:08:24,764 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-05 21:09:27] 2025-10-06 01:08:24,765 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-05 21:09:27] 2025-10-06 01:08:24,765 | INFO     | job 6831776719 has completed (purged errors)
[2025-10-05 21:09:27] 2025-10-06 01:08:24,765 | INFO     | overall cleanup function is called
[2025-10-05 21:09:27] 2025-10-06 01:08:25,771 | INFO     | --- collectZombieJob: --- 10, [31163]
[2025-10-05 21:09:27] 2025-10-06 01:08:25,772 | INFO     | zombie collector waiting for pid 31163
[2025-10-05 21:09:27] 2025-10-06 01:08:25,772 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-05 21:09:27] 2025-10-06 01:08:25,772 | INFO     | collected zombie processes
[2025-10-05 21:09:27] 2025-10-06 01:08:25,772 | INFO     | will attempt to kill all subprocesses of pid=31163
[2025-10-05 21:09:27] 2025-10-06 01:08:25,858 | INFO     | process IDs to be killed: [31163] (in reverse order)
[2025-10-05 21:09:27] 2025-10-06 01:08:25,913 | WARNING  | found no corresponding commands to process id(s)
[2025-10-05 21:09:27] 2025-10-06 01:08:25,913 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-05 21:09:27] 2025-10-06 01:08:25,918 | INFO     | did not find any defunct processes belonging to 31163
[2025-10-05 21:09:27] 2025-10-06 01:08:25,921 | INFO     | did not find any defunct processes belonging to 31163
[2025-10-05 21:09:27] 2025-10-06 01:08:25,921 | INFO     | ready for new job
[2025-10-05 21:09:27] 2025-10-06 01:08:25,921 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-05 21:09:27] 2025-10-06 01:08:25,923 | INFO     | ***************************************
[2025-10-05 21:09:27] 2025-10-06 01:08:25,923 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-05 21:09:27] 2025-10-06 01:08:25,923 | INFO     | ***************************************
[2025-10-05 21:09:27] 2025-10-06 01:08:25,924 | INFO     | 
[2025-10-05 21:09:27] 2025-10-06 01:08:25,924 | INFO     | architecture information:
[2025-10-05 21:09:27] 2025-10-06 01:08:25,925 | INFO     | executing command: cat /etc/os-release
[2025-10-05 21:09:27] 2025-10-06 01:08:25,942 | INFO     | cat /etc/os-release:
[2025-10-05 21:09:27] NAME="CentOS Linux"
[2025-10-05 21:09:27] VERSION="7 (Core)"
[2025-10-05 21:09:27] ID="centos"
[2025-10-05 21:09:27] ID_LIKE="rhel fedora"
[2025-10-05 21:09:27] VERSION_ID="7"
[2025-10-05 21:09:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-05 21:09:27] ANSI_COLOR="0;31"
[2025-10-05 21:09:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-05 21:09:27] HOME_URL="https://www.centos.org/"
[2025-10-05 21:09:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-05 21:09:27] 
[2025-10-05 21:09:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-05 21:09:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-05 21:09:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-05 21:09:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-05 21:09:27] 
[2025-10-05 21:09:27] 2025-10-06 01:08:25,942 | INFO     | ***************************************
[2025-10-05 21:09:27] 2025-10-06 01:08:26,445 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-05 21:09:27] 2025-10-06 01:08:26,464 | INFO     | sufficient remaining disk space (18619564032 B)
[2025-10-05 21:09:27] 2025-10-06 01:08:26,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-05 21:09:27] 2025-10-06 01:08:26,465 | INFO     | current server update state: UPDATING_FINAL
[2025-10-05 21:09:27] 2025-10-06 01:08:26,465 | INFO     | update_server=False
[2025-10-05 21:09:27] 2025-10-06 01:08:26,465 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-05 21:09:27] 2025-10-06 01:08:26,466 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-05 21:09:27] 2025-10-06 01:08:26,466 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-05 21:09:27] 2025-10-06 01:08:26,467 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-05 21:09:27] 2025-10-06 01:08:26,467 | INFO     | aborting loop
[2025-10-05 21:09:27] 2025-10-06 01:08:27,081 | INFO     | all job control threads have been joined
[2025-10-05 21:09:27] 2025-10-06 01:08:27,458 | INFO     | all data control threads have been joined
[2025-10-05 21:09:27] 2025-10-06 01:08:27,470 | INFO     | [job] retrieve thread has finished
[2025-10-05 21:09:27] 2025-10-06 01:08:27,472 | INFO     | [job] queue monitor thread has finished
[2025-10-05 21:09:27] 2025-10-06 01:08:27,473 | INFO     | [job] job monitor thread has finished
[2025-10-05 21:09:27] 2025-10-06 01:08:27,647 | INFO     | [payload] validate_post thread has finished
[2025-10-05 21:09:27] 2025-10-06 01:08:27,742 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-05 21:09:27] 2025-10-06 01:08:27,884 | INFO     | all payload control threads have been joined
[2025-10-05 21:09:27] 2025-10-06 01:08:28,086 | INFO     | [job] control thread has finished
[2025-10-05 21:09:27] 2025-10-06 01:08:28,206 | INFO     | [job] validate thread has finished
[2025-10-05 21:09:27] 2025-10-06 01:08:28,458 | INFO     | [data] control thread has finished
[2025-10-05 21:09:27] 2025-10-06 01:08:28,467 | INFO     | [payload] execute_payloads thread has finished
[2025-10-05 21:09:27] 2025-10-06 01:08:28,471 | INFO     | [data] copytool_out thread has finished
[2025-10-05 21:09:27] 2025-10-06 01:08:28,489 | INFO     | [payload] failed_post thread has finished
[2025-10-05 21:09:27] 2025-10-06 01:08:28,644 | INFO     | [payload] validate_pre thread has finished
[2025-10-05 21:09:27] 2025-10-06 01:08:28,649 | INFO     | [job] create_data_payload thread has finished
[2025-10-05 21:09:27] 2025-10-06 01:08:28,726 | INFO     | [data] copytool_in thread has finished
[2025-10-05 21:09:27] 2025-10-06 01:08:28,890 | INFO     | [payload] control thread has finished
[2025-10-05 21:09:27] 2025-10-06 01:08:29,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-05 21:09:27] 2025-10-06 01:08:33,628 | INFO     | [data] queue_monitor thread has finished
[2025-10-05 21:09:27] 2025-10-06 01:08:56,017 | INFO     | PID=24737 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-05 21:09:27] 2025-10-06 01:08:56,027 | INFO     | found 0 job(s) in 20 queues
[2025-10-05 21:09:27] 2025-10-06 01:08:56,027 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-05 21:09:27] 2025-10-06 01:08:56,027 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-05 21:09:27] 2025-10-06 01:09:21,125 | INFO     | [monitor] cgroup control has ended
[2025-10-05 21:09:27] 2025-10-06 01:09:22,389 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140021078275904)>', '<ExcThread(monitor, started 140019817768704)>']
[2025-10-05 21:09:27] 2025-10-06 01:09:23,157 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-05 21:09:27] 2025-10-06 01:09:23,158 | INFO     | [monitor] control thread has ended
[2025-10-05 21:09:27] 2025-10-06 01:09:27,401 | INFO     | all workflow threads have been joined
[2025-10-05 21:09:27] 2025-10-06 01:09:27,402 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-05 21:09:27] 2025-10-06 01:09:27,402 | INFO     | traces error code: 0
[2025-10-05 21:09:27] 2025-10-06 01:09:27,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-05 21:09:27] 2025-10-06 01:09:27,520 [wrapper] ==== pilot stdout END ====
[2025-10-05 21:09:27] 2025-10-06 01:09:27,525 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-05 21:09:27] 2025-10-06 01:09:27,529 [wrapper] pilotpid: 24737
[2025-10-05 21:09:27] 2025-10-06 01:09:27,534 [wrapper] Pilot exit status: 0
[2025-10-05 21:09:27] 2025-10-06 01:09:27,553 [wrapper] pandaids: 6831776719
[2025-10-05 21:09:27] 2025-10-06 01:09:27,603 [wrapper] cleanup supervisor_pilot 26743 24738
[2025-10-05 21:09:27] 2025-10-06 01:09:27,608 [wrapper] Test setup, not cleaning
[2025-10-05 21:09:27] 2025-10-06 01:09:27,613 [wrapper] apfmon messages muted
[2025-10-05 21:09:27] 2025-10-06 01:09:27,617 [wrapper] ==== wrapper stdout END ====
[2025-10-05 21:09:27] 2025-10-06 01:09:27,622 [wrapper] ==== wrapper stderr END ====
[2025-10-05 21:09:27]  *** Error codes and diagnostics ***
[2025-10-05 21:09:27]     "exeErrorCode": 0,
[2025-10-05 21:09:27]     "exeErrorDiag": "",
[2025-10-05 21:09:27]     "pilotErrorCode": 0,
[2025-10-05 21:09:27]     "pilotErrorDiag": "",
[2025-10-05 21:09:27]  *** Listing of results directory ***
[2025-10-05 21:09:27] total 388892
[2025-10-05 21:09:27] -rw-r--r-- 1 boincer umatlas    552446 Oct  5 12:06 pilot3.tar.gz
[2025-10-05 21:09:27] -rw-r--r-- 1 boincer umatlas      5112 Oct  5 12:51 queuedata.json
[2025-10-05 21:09:27] -rwx------ 1 boincer umatlas     36292 Oct  5 12:52 runpilot2-wrapper.sh
[2025-10-05 21:09:27] -rw-r--r-- 1 boincer umatlas       100 Oct  5 19:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-05 21:09:27] -rwxr-xr-x 1 boincer umatlas      7986 Oct  5 19:28 run_atlas
[2025-10-05 21:09:27] -rw-r--r-- 1 boincer umatlas       105 Oct  5 19:28 job.xml
[2025-10-05 21:09:27] -rw-r--r-- 2 boincer umatlas 214681391 Oct  5 19:28 EVNT.46376901._003329.pool.root.1
[2025-10-05 21:09:27] -rw-r--r-- 2 boincer umatlas     15120 Oct  5 19:28 start_atlas.sh
[2025-10-05 21:09:27] drwxrwx--x 2 boincer umatlas      4096 Oct  5 19:28 shared
[2025-10-05 21:09:27] -rw-r--r-- 2 boincer umatlas    565607 Oct  5 19:28 input.tar.gz
[2025-10-05 21:09:27] -rw-r--r-- 1 boincer umatlas         0 Oct  5 19:28 boinc_lockfile
[2025-10-05 21:09:27] -rw-r--r-- 1 boincer umatlas      2519 Oct  5 19:28 pandaJob.out
[2025-10-05 21:09:27] -rw------- 1 boincer umatlas    974144 Oct  5 19:29 agis_schedconf.cvmfs.json
[2025-10-05 21:09:27] -rw------- 1 boincer umatlas   1560401 Oct  5 19:29 agis_ddmendpoints.agis.ALL.json
[2025-10-05 21:09:27] drwx------ 4 boincer umatlas      4096 Oct  5 19:29 pilot3
[2025-10-05 21:09:27] -rw-r--r-- 1 boincer umatlas      5908 Oct  5 21:01 init_data.xml
[2025-10-05 21:09:27] -rw------- 1 boincer umatlas 177281220 Oct  5 21:07 HITS.46376905._090423.pool.root.1
[2025-10-05 21:09:27] -rw-r--r-- 1 boincer umatlas       529 Oct  5 21:07 boinc_task_state.xml
[2025-10-05 21:09:27] -rw------- 1 boincer umatlas      1049 Oct  5 21:08 memory_monitor_summary.json
[2025-10-05 21:09:27] -rw------- 1 boincer umatlas    349978 Oct  5 21:08 log.46376905._090423.job.log.tgz.1
[2025-10-05 21:09:27] -rw------- 1 boincer umatlas      7850 Oct  5 21:08 heartbeat.json
[2025-10-05 21:09:27] -rw------- 1 boincer umatlas        95 Oct  5 21:08 pilot_heartbeat.json
[2025-10-05 21:09:27] -rw-r--r-- 1 boincer umatlas      8192 Oct  5 21:09 boinc_mmap_file
[2025-10-05 21:09:27] -rw-r--r-- 1 boincer umatlas        27 Oct  5 21:09 wrapper_checkpoint.txt
[2025-10-05 21:09:27] -rw------- 1 boincer umatlas      4746 Oct  5 21:09 pilotlog.txt
[2025-10-05 21:09:27] -rw------- 1 boincer umatlas    841215 Oct  5 21:09 log.46376905._090423.job.log.1
[2025-10-05 21:09:27] -rw------- 1 boincer umatlas       357 Oct  5 21:09 output.list
[2025-10-05 21:09:27] -rw-r--r-- 1 boincer umatlas       620 Oct  5 21:09 runtime_log
[2025-10-05 21:09:27] -rw------- 1 boincer umatlas   1208320 Oct  5 21:09 result.tar.gz
[2025-10-05 21:09:27] -rw-r--r-- 1 boincer umatlas      8698 Oct  5 21:09 runtime_log.err
[2025-10-05 21:09:27] -rw------- 1 boincer umatlas       657 Oct  5 21:09 pTFNDmJ9gP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQFQNDmHbzmrm.diag
[2025-10-05 21:09:27] -rw-r--r-- 1 boincer umatlas     21784 Oct  5 21:09 stderr.txt
[2025-10-05 21:09:27] HITS file was successfully produced:
[2025-10-05 21:09:27] -rw------- 1 boincer umatlas 177281220 Oct  5 21:07 shared/HITS.pool.root.1
[2025-10-05 21:09:27]  *** Contents of shared directory: ***
[2025-10-05 21:09:27] total 384536
[2025-10-05 21:09:27] -rw-r--r-- 2 boincer umatlas 214681391 Oct  5 19:28 ATLAS.root_0
[2025-10-05 21:09:27] -rw-r--r-- 2 boincer umatlas     15120 Oct  5 19:28 start_atlas.sh
[2025-10-05 21:09:27] -rw-r--r-- 2 boincer umatlas    565607 Oct  5 19:28 input.tar.gz
[2025-10-05 21:09:27] -rw------- 1 boincer umatlas 177281220 Oct  5 21:07 HITS.pool.root.1
[2025-10-05 21:09:27] -rw------- 1 boincer umatlas   1208320 Oct  5 21:09 result.tar.gz
21:09:29 (20993): run_atlas exited; CPU time 43951.954609
21:09:29 (20993): called boinc_finish(0)

</stderr_txt>
]]>

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