Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
03:11:48 (2205): wrapper (7.7.26015): starting
03:11:48 (2205): wrapper: running run_atlas (--nthreads 8)
[2025-10-06 03:11:48] Arguments: --nthreads 8
[2025-10-06 03:11:48] Threads: 8
[2025-10-06 03:11:48] Checking for CVMFS
[2025-10-06 03:11:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 03:11:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 03:11:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 03:11:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 03:11:48] 2.11.0.0 15357 25244 55748 151380 0 188 3337791 4096001 1012 130560 0 618621 98.852 1387819 226 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-10-06 03:11:48] CVMFS is ok
[2025-10-06 03:11:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 03:11:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 03:11:48] Further information can be found at the LHC@home message board.
[2025-10-06 03:11:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 03:11:48] Checking for apptainer binary...
[2025-10-06 03:11:48] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-10-06 03:11:48] apptainer is not installed, using version from CVMFS
[2025-10-06 03:11:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 03:11:49] WARNING: Environment variable TMPDIR already has value [/tmp/job_10200739/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node410
[2025-10-06 03:11:49] apptainer works
[2025-10-06 03:11:49] Set ATHENA_PROC_NUMBER=8
[2025-10-06 03:11:49] Set ATHENA_CORE_NUMBER=8
[2025-10-06 03:11:49] Starting ATLAS job with PandaID=6831805643
[2025-10-06 03:11:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10200739/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 03:53:25]  *** The last 200 lines of the pilot log: ***
[2025-10-06 03:53:25]  replicas=None
[2025-10-06 03:53:25]  scope=mc23_13p6TeV
[2025-10-06 03:53:25]  status=None
[2025-10-06 03:53:25]  status_code=0
[2025-10-06 03:53:25]  storage_token=
[2025-10-06 03:53:25]  surl=/tmp/job_10200739/atlas/pilot/slots/0/PanDA_Pilot-6831805643/log.46376905._092082.job.log.tgz.1
[2025-10-06 03:53:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/35/log.46376905._092082.job.log.tgz.1
[2025-10-06 03:53:25]  workdir=None
[2025-10-06 03:53:25] ]
[2025-10-06 03:53:25] 2025-10-06 01:52:45,793 | INFO     | transferring file log.46376905._092082.job.log.tgz.1 from /tmp/job_10200739/atlas/pilot/slots/0/PanDA_Pilot-6831805643/log.46376905._092082.job.log.tgz.1 to /tmp/j
[2025-10-06 03:53:25] 2025-10-06 01:52:45,793 | INFO     | executing command: /usr/bin/env mv /tmp/job_10200739/atlas/pilot/slots/0/PanDA_Pilot-6831805643/log.46376905._092082.job.log.tgz.1 /tmp/job_10200739/atlas/pilot/sl
[2025-10-06 03:53:25] 2025-10-06 01:52:45,801 | INFO     | adding to output.list: log.46376905._092082.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/35/log.46376905._092082.job.log.tg
[2025-10-06 03:53:25] 2025-10-06 01:52:45,802 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-06 03:53:25] 2025-10-06 01:52:45,802 | INFO     | summary of transferred files:
[2025-10-06 03:53:25] 2025-10-06 01:52:45,802 | INFO     |  -- lfn=log.46376905._092082.job.log.tgz.1, status_code=0, status=transferred
[2025-10-06 03:53:25] 2025-10-06 01:52:45,802 | INFO     | stage-out finished correctly
[2025-10-06 03:53:25] 2025-10-06 01:52:47,317 | INFO     | monitor loop #185: job 0:6831805643 is in state 'finished'
[2025-10-06 03:53:25] 2025-10-06 01:52:47,317 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 03:53:25] 2025-10-06 01:52:47,622 | INFO     | time since job start (2453s) is within the limit (172800.0s)
[2025-10-06 03:53:25] 2025-10-06 01:52:48,346 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-06 03:53:25] 2025-10-06 01:52:48,762 | INFO     | PID=15582 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-06 03:53:25] 2025-10-06 01:52:48,762 | INFO     | .. there are 7 such processes running
[2025-10-06 03:53:25] 2025-10-06 01:52:49,762 | INFO     | time since job start (2455s) is within the limit (172800.0s)
[2025-10-06 03:53:25] 2025-10-06 01:52:49,820 | INFO     | monitor loop #186: job 0:6831805643 is in state 'finished'
[2025-10-06 03:53:25] 2025-10-06 01:52:49,820 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 03:53:25] 2025-10-06 01:52:50,323 | INFO     | job 6831805643 has state=finished
[2025-10-06 03:53:25] 2025-10-06 01:52:50,324 | INFO     | preparing for final server update for job 6831805643 in state='finished'
[2025-10-06 03:53:25] 2025-10-06 01:52:50,324 | INFO     | this job has now completed (state=finished)
[2025-10-06 03:53:25] 2025-10-06 01:52:50,324 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-06 03:53:25] 2025-10-06 01:52:50,324 | INFO     | log transfer has been attempted: DONE
[2025-10-06 03:53:25] 2025-10-06 01:52:50,324 | INFO     | job 6831805643 has finished - writing final server update
[2025-10-06 03:53:25] 2025-10-06 01:52:50,324 | INFO     | total number of processed events: 400 (read)
[2025-10-06 03:53:25] 2025-10-06 01:52:50,324 | INFO     | executing command: lscpu
[2025-10-06 03:53:25] 2025-10-06 01:52:50,356 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-06 03:53:25] 2025-10-06 01:52:51,767 | INFO     | time since job start (2457s) is within the limit (172800.0s)
[2025-10-06 03:53:25] 2025-10-06 01:52:52,004 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-06 03:53:25] 2025-10-06 01:52:52,008 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 3020.1385156250003
[2025-10-06 03:53:25] 2025-10-06 01:52:52,013 | INFO     | using path: /tmp/job_10200739/atlas/pilot/slots/0/PanDA_Pilot-6831805643/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 03:53:25] 2025-10-06 01:52:52,013 | INFO     | extracted standard info from prmon json
[2025-10-06 03:53:25] 2025-10-06 01:52:52,013 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 03:53:25] 2025-10-06 01:52:52,014 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 03:53:25] 2025-10-06 01:52:52,014 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 03:53:25] 2025-10-06 01:52:52,014 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 03:53:25] 2025-10-06 01:52:52,014 | INFO     | fitting pss+swap vs Time
[2025-10-06 03:53:25] 2025-10-06 01:52:52,014 | INFO     | sum of square deviations: 11133232.0
[2025-10-06 03:53:25] 2025-10-06 01:52:52,015 | INFO     | sum of deviations: 127498662.0
[2025-10-06 03:53:25] 2025-10-06 01:52:52,015 | INFO     | mean x: 1759714412.0
[2025-10-06 03:53:25] 2025-10-06 01:52:52,015 | INFO     | mean y: 2501477.272727273
[2025-10-06 03:53:25] 2025-10-06 01:52:52,015 | INFO     | -- intersect: -20149888505.44898
[2025-10-06 03:53:25] 2025-10-06 01:52:52,015 | INFO     | intersect: -20149888505.44898
[2025-10-06 03:53:25] 2025-10-06 01:52:52,015 | INFO     | chi2: 0.00010386447017877972
[2025-10-06 03:53:25] 2025-10-06 01:52:52,015 | INFO     | -- intersect: -20149888505.44898
[2025-10-06 03:53:25] 2025-10-06 01:52:52,015 | INFO     | current memory leak: 11.45 B/s (using 33 data points, chi2=0.00)
[2025-10-06 03:53:25] 2025-10-06 01:52:52,015 | INFO     | could have reported an average CPU frequency of 2690 MHz (5 samples)
[2025-10-06 03:53:25] 2025-10-06 01:52:52,015 | INFO     | ..............................
[2025-10-06 03:53:25] 2025-10-06 01:52:52,015 | INFO     | . Timing measurements:
[2025-10-06 03:53:25] 2025-10-06 01:52:52,015 | INFO     | . get job = 0 s
[2025-10-06 03:53:25] 2025-10-06 01:52:52,015 | INFO     | . initial setup = 1 s
[2025-10-06 03:53:25] 2025-10-06 01:52:52,015 | INFO     | . payload setup = 2 s
[2025-10-06 03:53:25] 2025-10-06 01:52:52,015 | INFO     | . stage-in = 0 s
[2025-10-06 03:53:25] 2025-10-06 01:52:52,015 | INFO     | . payload execution = 2432 s
[2025-10-06 03:53:25] 2025-10-06 01:52:52,015 | INFO     | . stage-out = 0 s
[2025-10-06 03:53:25] 2025-10-06 01:52:52,015 | INFO     | . log creation = 0 s
[2025-10-06 03:53:25] 2025-10-06 01:52:52,015 | INFO     | ..............................
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | 
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | job summary report
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | --------------------------------------------------
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | PanDA job id: 6831805643
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | task id: 46376905
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | errors: (none)
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | pilot state: finished 
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | transexitcode: 0
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | exeerrorcode: 0
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | exeerrordiag: 
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | exitcode: 0
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | exitmsg: OK
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | cpuconsumptiontime: 17539 s
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | nevents: 400
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | neventsw: 0
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | pid: 24478
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | pgrp: 24478
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | corecount: 8
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | event service: False
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | sizes: {0: 2348942, 2: 2349204, 11: 2349232, 2438: 2374516, 2439: 2383544, 2441: 2383600, 2445: 2383954}
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | --------------------------------------------------
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | 
[2025-10-06 03:53:25] 2025-10-06 01:52:52,243 | INFO     | executing command: ls -lF /tmp/job_10200739/atlas/pilot/slots/0
[2025-10-06 03:53:25] 2025-10-06 01:52:52,253 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 03:53:25] 2025-10-06 01:52:52,253 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 03:53:25] 2025-10-06 01:52:52,253 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 03:53:25] 2025-10-06 01:52:52,253 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 03:53:25] 2025-10-06 01:52:52,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 03:53:25] 2025-10-06 01:52:52,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 03:53:25] 2025-10-06 01:52:52,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 03:53:25] 2025-10-06 01:52:52,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 03:53:25] 2025-10-06 01:52:52,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 03:53:25] 2025-10-06 01:52:52,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 03:53:25] 2025-10-06 01:52:52,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 03:53:25] 2025-10-06 01:52:52,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 03:53:25] 2025-10-06 01:52:52,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 03:53:25] 2025-10-06 01:52:52,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 03:53:25] 2025-10-06 01:52:52,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 03:53:25] 2025-10-06 01:52:52,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 03:53:25] 2025-10-06 01:52:52,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 03:53:25] 2025-10-06 01:52:52,254 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 03:53:25] 2025-10-06 01:52:52,254 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 03:53:25] 2025-10-06 01:52:52,254 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 03:53:25] 2025-10-06 01:52:52,254 | INFO     | job 6831805643 has completed (purged errors)
[2025-10-06 03:53:25] 2025-10-06 01:52:52,254 | INFO     | overall cleanup function is called
[2025-10-06 03:53:25] 2025-10-06 01:52:53,260 | INFO     | --- collectZombieJob: --- 10, [24478]
[2025-10-06 03:53:25] 2025-10-06 01:52:53,260 | INFO     | zombie collector waiting for pid 24478
[2025-10-06 03:53:25] 2025-10-06 01:52:53,260 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 03:53:25] 2025-10-06 01:52:53,260 | INFO     | collected zombie processes
[2025-10-06 03:53:25] 2025-10-06 01:52:53,260 | INFO     | will attempt to kill all subprocesses of pid=24478
[2025-10-06 03:53:25] 2025-10-06 01:52:53,370 | INFO     | process IDs to be killed: [24478] (in reverse order)
[2025-10-06 03:53:25] 2025-10-06 01:52:53,410 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 03:53:25] 2025-10-06 01:52:53,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 03:53:25] 2025-10-06 01:52:53,415 | INFO     | did not find any defunct processes belonging to 24478
[2025-10-06 03:53:25] 2025-10-06 01:52:53,419 | INFO     | did not find any defunct processes belonging to 24478
[2025-10-06 03:53:25] 2025-10-06 01:52:53,419 | INFO     | ready for new job
[2025-10-06 03:53:25] 2025-10-06 01:52:53,419 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 03:53:25] 2025-10-06 01:52:53,419 | INFO     | ***************************************
[2025-10-06 03:53:25] 2025-10-06 01:52:53,419 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 03:53:25] 2025-10-06 01:52:53,419 | INFO     | ***************************************
[2025-10-06 03:53:25] 2025-10-06 01:52:53,419 | INFO     | 
[2025-10-06 03:53:25] 2025-10-06 01:52:53,433 | INFO     | architecture information:
[2025-10-06 03:53:25] 2025-10-06 01:52:53,433 | INFO     | executing command: cat /etc/os-release
[2025-10-06 03:53:25] 2025-10-06 01:52:53,437 | INFO     | cat /etc/os-release:
[2025-10-06 03:53:25] NAME="CentOS Linux"
[2025-10-06 03:53:25] VERSION="7 (Core)"
[2025-10-06 03:53:25] ID="centos"
[2025-10-06 03:53:25] ID_LIKE="rhel fedora"
[2025-10-06 03:53:25] VERSION_ID="7"
[2025-10-06 03:53:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 03:53:25] ANSI_COLOR="0;31"
[2025-10-06 03:53:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 03:53:25] HOME_URL="https://www.centos.org/"
[2025-10-06 03:53:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 03:53:25] 
[2025-10-06 03:53:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 03:53:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 03:53:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 03:53:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 03:53:25] 
[2025-10-06 03:53:25] 2025-10-06 01:52:53,437 | INFO     | ***************************************
[2025-10-06 03:53:25] 2025-10-06 01:52:53,940 | INFO     | executing command: df -mP /tmp/job_10200739/atlas/pilot/slots/0
[2025-10-06 03:53:25] 2025-10-06 01:52:53,946 | INFO     | sufficient remaining disk space (223713689600 B)
[2025-10-06 03:53:25] 2025-10-06 01:52:53,946 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 03:53:25] 2025-10-06 01:52:53,946 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 03:53:25] 2025-10-06 01:52:53,946 | INFO     | update_server=False
[2025-10-06 03:53:25] 2025-10-06 01:52:53,946 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 03:53:25] 2025-10-06 01:52:53,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 03:53:25] 2025-10-06 01:52:53,946 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 03:53:25] 2025-10-06 01:52:53,946 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 03:53:25] 2025-10-06 01:52:53,947 | INFO     | aborting loop
[2025-10-06 03:53:25] 2025-10-06 01:52:54,399 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 03:53:25] 2025-10-06 01:52:54,479 | INFO     | all payload control threads have been joined
[2025-10-06 03:53:25] 2025-10-06 01:52:54,951 | INFO     | [job] retrieve thread has finished
[2025-10-06 03:53:25] 2025-10-06 01:52:54,952 | INFO     | [job] queue monitor thread has finished
[2025-10-06 03:53:25] 2025-10-06 01:52:54,952 | INFO     | [job] job monitor thread has finished
[2025-10-06 03:53:25] 2025-10-06 01:52:54,973 | INFO     | all data control threads have been joined
[2025-10-06 03:53:25] 2025-10-06 01:52:54,981 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 03:53:25] 2025-10-06 01:52:54,993 | INFO     | all job control threads have been joined
[2025-10-06 03:53:25] 2025-10-06 01:52:55,026 | INFO     | [job] validate thread has finished
[2025-10-06 03:53:25] 2025-10-06 01:52:55,137 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 03:53:25] 2025-10-06 01:52:55,173 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 03:53:25] 2025-10-06 01:52:55,484 | INFO     | [payload] control thread has finished
[2025-10-06 03:53:25] 2025-10-06 01:52:55,545 | INFO     | [data] copytool_in thread has finished
[2025-10-06 03:53:25] 2025-10-06 01:52:55,746 | INFO     | [payload] failed_post thread has finished
[2025-10-06 03:53:25] 2025-10-06 01:52:55,853 | INFO     | [payload] validate_post thread has finished
[2025-10-06 03:53:25] 2025-10-06 01:52:55,952 | INFO     | [data] copytool_out thread has finished
[2025-10-06 03:53:25] 2025-10-06 01:52:55,978 | INFO     | [data] control thread has finished
[2025-10-06 03:53:25] 2025-10-06 01:52:55,998 | INFO     | [job] control thread has finished
[2025-10-06 03:53:25] 2025-10-06 01:52:57,680 | INFO     | [monitor] cgroup control has ended
[2025-10-06 03:53:25] 2025-10-06 01:52:58,404 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 03:53:25] 2025-10-06 01:53:04,829 | INFO     | job.realtimelogging is not enabled
[2025-10-06 03:53:25] 2025-10-06 01:53:05,835 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 03:53:25] 2025-10-06 01:53:07,740 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456064747264)>']
[2025-10-06 03:53:25] 2025-10-06 01:53:12,765 | INFO     | all workflow threads have been joined
[2025-10-06 03:53:25] 2025-10-06 01:53:12,765 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 03:53:25] 2025-10-06 01:53:12,765 | INFO     | traces error code: 0
[2025-10-06 03:53:25] 2025-10-06 01:53:12,765 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 03:53:25] 2025-10-06 01:53:24,966 | INFO     | PID=15582 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-06 03:53:25] 2025-10-06 01:53:24,966 | INFO     | .. there are 7 such processes running
[2025-10-06 03:53:25] 2025-10-06 01:53:24,966 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 03:53:25] 2025-10-06 01:53:24,966 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 03:53:25] 2025-10-06 01:53:24,966 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 03:53:25] 2025-10-06 01:53:24,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 03:53:25] 2025-10-06 01:53:24,966 | INFO     | [monitor] control thread has ended
[2025-10-06 03:53:25] 2025-10-06 01:53:25,021 [wrapper] ==== pilot stdout END ====
[2025-10-06 03:53:25] 2025-10-06 01:53:25,023 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 03:53:25] 2025-10-06 01:53:25,024 [wrapper] pilotpid: 15582
[2025-10-06 03:53:25] 2025-10-06 01:53:25,025 [wrapper] Pilot exit status: 0
[2025-10-06 03:53:25] 2025-10-06 01:53:25,029 [wrapper] pandaids: 6831805643
[2025-10-06 03:53:25] 2025-10-06 01:53:25,055 [wrapper] cleanup supervisor_pilot 14438 15583
[2025-10-06 03:53:25] 2025-10-06 01:53:25,056 [wrapper] Test setup, not cleaning
[2025-10-06 03:53:25] 2025-10-06 01:53:25,057 [wrapper] apfmon messages muted
[2025-10-06 03:53:25] 2025-10-06 01:53:25,058 [wrapper] ==== wrapper stdout END ====
[2025-10-06 03:53:25] 2025-10-06 01:53:25,059 [wrapper] ==== wrapper stderr END ====
[2025-10-06 03:53:25]  *** Error codes and diagnostics ***
[2025-10-06 03:53:25]     "exeErrorCode": 0,
[2025-10-06 03:53:25]     "exeErrorDiag": "",
[2025-10-06 03:53:25]     "pilotErrorCode": 0,
[2025-10-06 03:53:25]     "pilotErrorDiag": "",
[2025-10-06 03:53:25]  *** Listing of results directory ***
[2025-10-06 03:53:25] total 387688
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user    552446 Oct  5 19:56 pilot3.tar.gz
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user      5112 Oct  5 19:59 queuedata.json
[2025-10-06 03:53:25] -rwx------ 1 mf493845 unix-user     36292 Oct  5 19:59 runpilot2-wrapper.sh
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user       100 Oct  6 02:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 03:53:25] -rwxr-xr-x 1 mf493845 unix-user      7986 Oct  6 02:17 run_atlas
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user       105 Oct  6 02:17 job.xml
[2025-10-06 03:53:25] -rw-r--r-- 2 mf493845 unix-user     15120 Oct  6 03:11 start_atlas.sh
[2025-10-06 03:53:25] drwxrwx--x 2 mf493845 unix-user       100 Oct  6 03:11 shared
[2025-10-06 03:53:25] -rw-r--r-- 2 mf493845 unix-user    565599 Oct  6 03:11 input.tar.gz
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user      6389 Oct  6 03:11 init_data.xml
[2025-10-06 03:53:25] -rw-r--r-- 2 mf493845 unix-user 212640963 Oct  6 03:11 EVNT.46376901._003394.pool.root.1
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user         0 Oct  6 03:11 boinc_setup_complete
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user      8192 Oct  6 03:11 boinc_mmap_file
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user         0 Oct  6 03:11 boinc_lockfile
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user      2519 Oct  6 03:11 pandaJob.out
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user    974152 Oct  6 03:11 agis_schedconf.cvmfs.json
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user   1560401 Oct  6 03:11 agis_ddmendpoints.agis.ALL.json
[2025-10-06 03:53:25] drwx------ 4 mf493845 unix-user       400 Oct  6 03:11 pilot3
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user 179125805 Oct  6 03:52 HITS.46376905._092082.pool.root.1
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user        95 Oct  6 03:52 pilot_heartbeat.json
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user      1007 Oct  6 03:52 memory_monitor_summary.json
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user    286319 Oct  6 03:52 log.46376905._092082.job.log.tgz.1
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user      7763 Oct  6 03:52 heartbeat.json
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user       820 Oct  6 03:53 pilotlog.txt
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user    401174 Oct  6 03:53 log.46376905._092082.job.log.1
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user       357 Oct  6 03:53 output.list
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user       620 Oct  6 03:53 runtime_log
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user    706560 Oct  6 03:53 result.tar.gz
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user      9076 Oct  6 03:53 runtime_log.err
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user       641 Oct  6 03:53 3TjMDmeCiP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLXQNDmyYiBSm.diag
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user     22355 Oct  6 03:53 stderr.txt
[2025-10-06 03:53:25] HITS file was successfully produced:
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user 179125805 Oct  6 03:52 shared/HITS.pool.root.1
[2025-10-06 03:53:25]  *** Contents of shared directory: ***
[2025-10-06 03:53:25] total 383852
[2025-10-06 03:53:25] -rw-r--r-- 2 mf493845 unix-user     15120 Oct  6 03:11 start_atlas.sh
[2025-10-06 03:53:25] -rw-r--r-- 2 mf493845 unix-user    565599 Oct  6 03:11 input.tar.gz
[2025-10-06 03:53:25] -rw-r--r-- 2 mf493845 unix-user 212640963 Oct  6 03:11 ATLAS.root_0
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user 179125805 Oct  6 03:52 HITS.pool.root.1
[2025-10-06 03:53:25] -rw------- 1 mf493845 unix-user    706560 Oct  6 03:53 result.tar.gz
03:53:26 (2205): run_atlas exited; CPU time 17577.108697
03:53:26 (2205): called boinc_finish(0)

</stderr_txt>
]]>

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