Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:52:21 (5787): wrapper (7.7.26015): starting
10:52:21 (5787): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 10:52:21] Arguments: --nthreads 8
[2025-10-08 10:52:21] Threads: 8
[2025-10-08 10:52:21] Checking for CVMFS
[2025-10-08 10:52:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 10:52:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 10:52:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 10:52:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 10:52:24] 2.11.2.0 32446 101399 107220 151465 3 61 15198732 25165824 4632 130560 0 38818616 99.924 14017480 2492 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-08 10:52:24] CVMFS is ok
[2025-10-08 10:52:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 10:52:24] Checking for apptainer binary...
[2025-10-08 10:52:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 10:52:24] Running /usr/bin/apptainer --version
[2025-10-08 10:52:24] apptainer version 1.3.2-1.el7
[2025-10-08 10:52:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 10:52:28] cg-vwn269.simple-grid.lan
[2025-10-08 10:52:28] apptainer works
[2025-10-08 10:52:28] Set ATHENA_PROC_NUMBER=8
[2025-10-08 10:52:28] Set ATHENA_CORE_NUMBER=8
[2025-10-08 10:52:29] Starting ATLAS job with PandaID=6831945987
[2025-10-08 10:52:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 14:36:37]  *** The last 200 lines of the pilot log: ***
[2025-10-08 14:36:37] 2025-10-08 12:35:37,342 | INFO     | time since job start (13171s) is within the limit (172800.0s)
[2025-10-08 14:36:37] 2025-10-08 12:35:38,571 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-08 14:36:37] 2025-10-08 12:35:38,572 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-10-08 14:36:37] 2025-10-08 12:35:38,574 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6831945987/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 14:36:37] 2025-10-08 12:35:38,575 | INFO     | extracted standard info from prmon json
[2025-10-08 14:36:37] 2025-10-08 12:35:38,575 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 14:36:37] 2025-10-08 12:35:38,575 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 14:36:37] 2025-10-08 12:35:38,575 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 14:36:37] 2025-10-08 12:35:38,575 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 14:36:37] 2025-10-08 12:35:38,580 | INFO     | fitting pss+swap vs Time
[2025-10-08 14:36:37] 2025-10-08 12:35:38,580 | INFO     | sum of square deviations: 2750295288.0
[2025-10-08 14:36:37] 2025-10-08 12:35:38,585 | INFO     | sum of deviations: 59858794615.000015
[2025-10-08 14:36:37] 2025-10-08 12:35:38,585 | INFO     | mean x: 1759920533.0
[2025-10-08 14:36:37] 2025-10-08 12:35:38,585 | INFO     | mean y: 2427960.927536232
[2025-10-08 14:36:37] 2025-10-08 12:35:38,586 | INFO     | -- intersect: -38301357884.619225
[2025-10-08 14:36:37] 2025-10-08 12:35:38,586 | INFO     | intersect: -38301357884.619225
[2025-10-08 14:36:37] 2025-10-08 12:35:38,586 | INFO     | chi2: 4.650626627088483
[2025-10-08 14:36:37] 2025-10-08 12:35:38,586 | INFO     | sum of square deviations: 2555770710.5
[2025-10-08 14:36:37] 2025-10-08 12:35:38,588 | INFO     | sum of deviations: 71714822629.99998
[2025-10-08 14:36:37] 2025-10-08 12:35:38,588 | INFO     | mean x: 1759920380.5
[2025-10-08 14:36:37] 2025-10-08 12:35:38,588 | INFO     | mean y: 2437046.920792079
[2025-10-08 14:36:37] 2025-10-08 12:35:38,588 | INFO     | -- intersect: -49380857554.568695
[2025-10-08 14:36:37] 2025-10-08 12:35:38,589 | INFO     | intersect: -49380857554.568695
[2025-10-08 14:36:37] 2025-10-08 12:35:38,589 | INFO     | chi2: 3.9123924204637106
[2025-10-08 14:36:37] 2025-10-08 12:35:38,589 | INFO     | current chi2=3.9123924204637106 (change=15.873865305049073 %)
[2025-10-08 14:36:37] 2025-10-08 12:35:38,589 | INFO     | right removable region: 201
[2025-10-08 14:36:37] 2025-10-08 12:35:38,590 | INFO     | sum of square deviations: 2555770710.5
[2025-10-08 14:36:37] 2025-10-08 12:35:38,591 | INFO     | sum of deviations: -3861296065.5
[2025-10-08 14:36:37] 2025-10-08 12:35:38,591 | INFO     | mean x: 1759920685.5
[2025-10-08 14:36:37] 2025-10-08 12:35:38,592 | INFO     | mean y: 2477800.4306930695
[2025-10-08 14:36:37] 2025-10-08 12:35:38,592 | INFO     | -- intersect: 2661391916.080667
[2025-10-08 14:36:37] 2025-10-08 12:35:38,592 | INFO     | intersect: 2661391916.080667
[2025-10-08 14:36:37] 2025-10-08 12:35:38,592 | INFO     | chi2: 0.8848727192914415
[2025-10-08 14:36:37] 2025-10-08 12:35:38,592 | INFO     | current chi2=0.8848727192914415 (change=80.97304319944053 %)
[2025-10-08 14:36:37] 2025-10-08 12:35:38,593 | INFO     | sum of square deviations: 2370641658.0
[2025-10-08 14:36:37] 2025-10-08 12:35:38,594 | INFO     | sum of deviations: -9557173475.0
[2025-10-08 14:36:37] 2025-10-08 12:35:38,595 | INFO     | mean x: 1759920838.0
[2025-10-08 14:36:37] 2025-10-08 12:35:38,595 | INFO     | mean y: 2482407.670050761
[2025-10-08 14:36:37] 2025-10-08 12:35:38,595 | INFO     | -- intersect: 7097552510.008298
[2025-10-08 14:36:37] 2025-10-08 12:35:38,595 | INFO     | intersect: 7097552510.008298
[2025-10-08 14:36:37] 2025-10-08 12:35:38,598 | INFO     | chi2: 0.8105697721678828
[2025-10-08 14:36:37] 2025-10-08 12:35:38,599 | INFO     | current chi2=0.8105697721678828 (change=8.397020893926584 %)
[2025-10-08 14:36:37] 2025-10-08 12:35:38,599 | INFO     | left removable region: 20
[2025-10-08 14:36:37] 2025-10-08 12:35:38,599 | INFO     | sum of square deviations: 1838657730.0
[2025-10-08 14:36:37] 2025-10-08 12:35:38,600 | INFO     | sum of deviations: 3763579647.0
[2025-10-08 14:36:37] 2025-10-08 12:35:38,601 | INFO     | mean x: 1759920960.0
[2025-10-08 14:36:37] 2025-10-08 12:35:38,601 | INFO     | mean y: 2493055.1988950274
[2025-10-08 14:36:37] 2025-10-08 12:35:38,601 | INFO     | -- intersect: -3599918963.804066
[2025-10-08 14:36:37] 2025-10-08 12:35:38,601 | INFO     | intersect: -3599918963.804066
[2025-10-08 14:36:37] 2025-10-08 12:35:38,601 | INFO     | chi2: 0.0006758801332001512
[2025-10-08 14:36:37] 2025-10-08 12:35:38,601 | INFO     | -- intersect: -3599918963.804066
[2025-10-08 14:36:37] 2025-10-08 12:35:38,602 | INFO     | current memory leak: 2.05 B/s (using 181 data points, chi2=0.00)
[2025-10-08 14:36:37] 2025-10-08 12:35:38,602 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-10-08 14:36:37] 2025-10-08 12:35:38,602 | INFO     | ..............................
[2025-10-08 14:36:37] 2025-10-08 12:35:38,603 | INFO     | . Timing measurements:
[2025-10-08 14:36:37] 2025-10-08 12:35:38,603 | INFO     | . get job = 0 s
[2025-10-08 14:36:37] 2025-10-08 12:35:38,603 | INFO     | . initial setup = 9 s
[2025-10-08 14:36:37] 2025-10-08 12:35:38,603 | INFO     | . payload setup = 142 s
[2025-10-08 14:36:37] 2025-10-08 12:35:38,603 | INFO     | . stage-in = 0 s
[2025-10-08 14:36:37] 2025-10-08 12:35:38,603 | INFO     | . payload execution = 12737 s
[2025-10-08 14:36:37] 2025-10-08 12:35:38,603 | INFO     | . stage-out = 3 s
[2025-10-08 14:36:37] 2025-10-08 12:35:38,603 | INFO     | . log creation = 1 s
[2025-10-08 14:36:37] 2025-10-08 12:35:38,603 | INFO     | ..............................
[2025-10-08 14:36:37] 2025-10-08 12:35:38,990 | INFO     | 
[2025-10-08 14:36:37] 2025-10-08 12:35:38,990 | INFO     | job summary report
[2025-10-08 14:36:37] 2025-10-08 12:35:38,990 | INFO     | --------------------------------------------------
[2025-10-08 14:36:37] 2025-10-08 12:35:38,991 | INFO     | PanDA job id: 6831945987
[2025-10-08 14:36:37] 2025-10-08 12:35:38,991 | INFO     | task id: 46376905
[2025-10-08 14:36:37] 2025-10-08 12:35:38,991 | INFO     | errors: (none)
[2025-10-08 14:36:37] 2025-10-08 12:35:38,991 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 14:36:37] 2025-10-08 12:35:38,991 | INFO     | pilot state: finished 
[2025-10-08 14:36:37] 2025-10-08 12:35:38,991 | INFO     | transexitcode: 0
[2025-10-08 14:36:37] 2025-10-08 12:35:38,991 | INFO     | exeerrorcode: 0
[2025-10-08 14:36:37] 2025-10-08 12:35:38,991 | INFO     | exeerrordiag: 
[2025-10-08 14:36:37] 2025-10-08 12:35:38,991 | INFO     | exitcode: 0
[2025-10-08 14:36:37] 2025-10-08 12:35:38,991 | INFO     | exitmsg: OK
[2025-10-08 14:36:37] 2025-10-08 12:35:38,992 | INFO     | cpuconsumptiontime: 48098 s
[2025-10-08 14:36:37] 2025-10-08 12:35:38,992 | INFO     | nevents: 400
[2025-10-08 14:36:37] 2025-10-08 12:35:38,992 | INFO     | neventsw: 0
[2025-10-08 14:36:37] 2025-10-08 12:35:38,992 | INFO     | pid: 16176
[2025-10-08 14:36:37] 2025-10-08 12:35:38,992 | INFO     | pgrp: 16176
[2025-10-08 14:36:37] 2025-10-08 12:35:38,992 | INFO     | corecount: 8
[2025-10-08 14:36:37] 2025-10-08 12:35:38,992 | INFO     | event service: False
[2025-10-08 14:36:37] 2025-10-08 12:35:38,992 | INFO     | sizes: {0: 2347988, 1: 2348674, 2: 2348873, 13: 2348873, 23: 2348929, 34: 2348957, 45: 2349113, 55: 2349141, 66: 2349169, 77: 2349197, 88: 2349253, 90: 2349823, 98
[2025-10-08 14:36:37] 2025-10-08 12:35:38,992 | INFO     | --------------------------------------------------
[2025-10-08 14:36:37] 2025-10-08 12:35:38,993 | INFO     | 
[2025-10-08 14:36:37] 2025-10-08 12:35:38,993 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-10-08 14:36:37] 2025-10-08 12:35:39,349 | INFO     | time since job start (13173s) is within the limit (172800.0s)
[2025-10-08 14:36:37] 2025-10-08 12:35:39,358 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 14:36:37] 2025-10-08 12:35:39,358 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 14:36:37] 2025-10-08 12:35:39,358 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 14:36:37] 2025-10-08 12:35:39,359 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 14:36:37] 2025-10-08 12:35:39,359 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 14:36:37] 2025-10-08 12:35:39,359 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 14:36:37] 2025-10-08 12:35:39,359 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 14:36:37] 2025-10-08 12:35:39,359 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 14:36:37] 2025-10-08 12:35:39,359 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 14:36:37] 2025-10-08 12:35:39,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 14:36:37] 2025-10-08 12:35:39,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 14:36:37] 2025-10-08 12:35:39,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 14:36:37] 2025-10-08 12:35:39,360 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 14:36:37] 2025-10-08 12:35:39,360 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 14:36:37] 2025-10-08 12:35:39,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 14:36:37] 2025-10-08 12:35:39,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 14:36:37] 2025-10-08 12:35:39,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 14:36:37] 2025-10-08 12:35:39,360 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 14:36:37] 2025-10-08 12:35:39,360 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 14:36:37] 2025-10-08 12:35:39,360 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 14:36:37] 2025-10-08 12:35:39,361 | INFO     | job 6831945987 has completed (purged errors)
[2025-10-08 14:36:37] 2025-10-08 12:35:39,361 | INFO     | overall cleanup function is called
[2025-10-08 14:36:37] 2025-10-08 12:35:40,373 | INFO     | --- collectZombieJob: --- 10, [16176]
[2025-10-08 14:36:37] 2025-10-08 12:35:40,374 | INFO     | zombie collector waiting for pid 16176
[2025-10-08 14:36:37] 2025-10-08 12:35:40,374 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 14:36:37] 2025-10-08 12:35:40,374 | INFO     | collected zombie processes
[2025-10-08 14:36:37] 2025-10-08 12:35:40,374 | INFO     | will attempt to kill all subprocesses of pid=16176
[2025-10-08 14:36:37] 2025-10-08 12:35:40,483 | INFO     | process IDs to be killed: [16176] (in reverse order)
[2025-10-08 14:36:37] 2025-10-08 12:35:41,269 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 14:36:37] 2025-10-08 12:35:41,269 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 14:36:37] 2025-10-08 12:35:41,287 | INFO     | did not find any defunct processes belonging to 16176
[2025-10-08 14:36:37] 2025-10-08 12:35:41,291 | INFO     | did not find any defunct processes belonging to 16176
[2025-10-08 14:36:37] 2025-10-08 12:35:41,291 | INFO     | ready for new job
[2025-10-08 14:36:37] 2025-10-08 12:35:41,291 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 14:36:37] 2025-10-08 12:35:41,293 | INFO     | ***************************************
[2025-10-08 14:36:37] 2025-10-08 12:35:41,294 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 14:36:37] 2025-10-08 12:35:41,294 | INFO     | ***************************************
[2025-10-08 14:36:37] 2025-10-08 12:35:41,294 | INFO     | 
[2025-10-08 14:36:37] 2025-10-08 12:35:41,300 | INFO     | pilot is running in a VM
[2025-10-08 14:36:37] 2025-10-08 12:35:41,300 | INFO     | architecture information:
[2025-10-08 14:36:37] 2025-10-08 12:35:41,311 | INFO     | executing command: cat /etc/os-release
[2025-10-08 14:36:37] 2025-10-08 12:35:41,576 | INFO     | cat /etc/os-release:
[2025-10-08 14:36:37] NAME="CentOS Linux"
[2025-10-08 14:36:37] VERSION="7 (Core)"
[2025-10-08 14:36:37] ID="centos"
[2025-10-08 14:36:37] ID_LIKE="rhel fedora"
[2025-10-08 14:36:37] VERSION_ID="7"
[2025-10-08 14:36:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 14:36:37] ANSI_COLOR="0;31"
[2025-10-08 14:36:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 14:36:37] HOME_URL="https://www.centos.org/"
[2025-10-08 14:36:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 14:36:37] 
[2025-10-08 14:36:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 14:36:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 14:36:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 14:36:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 14:36:37] 
[2025-10-08 14:36:37] 2025-10-08 12:35:41,576 | INFO     | ***************************************
[2025-10-08 14:36:37] 2025-10-08 12:35:42,080 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-10-08 14:36:37] 2025-10-08 12:35:42,351 | INFO     | sufficient remaining disk space (496059285504 B)
[2025-10-08 14:36:37] 2025-10-08 12:35:42,352 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 14:36:37] 2025-10-08 12:35:42,352 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 14:36:37] 2025-10-08 12:35:42,352 | INFO     | update_server=False
[2025-10-08 14:36:37] 2025-10-08 12:35:42,352 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 14:36:37] 2025-10-08 12:35:42,439 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 14:36:37] 2025-10-08 12:35:42,440 | INFO     | aborting loop
[2025-10-08 14:36:37] 2025-10-08 12:35:43,059 | INFO     | all job control threads have been joined
[2025-10-08 14:36:37] 2025-10-08 12:35:43,149 | INFO     | all data control threads have been joined
[2025-10-08 14:36:37] 2025-10-08 12:35:43,358 | INFO     | [job] retrieve thread has finished
[2025-10-08 14:36:37] 2025-10-08 12:35:43,446 | INFO     | [job] job monitor thread has finished
[2025-10-08 14:36:37] 2025-10-08 12:35:43,558 | INFO     | all payload control threads have been joined
[2025-10-08 14:36:37] 2025-10-08 12:35:43,674 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 14:36:37] 2025-10-08 12:35:43,904 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 14:36:37] 2025-10-08 12:35:43,992 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 14:36:37] 2025-10-08 12:35:44,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 14:36:37] 2025-10-08 12:35:44,066 | INFO     | [job] control thread has finished
[2025-10-08 14:36:37] 2025-10-08 12:35:44,156 | INFO     | [data] control thread has finished
[2025-10-08 14:36:37] 2025-10-08 12:35:44,281 | INFO     | [payload] failed_post thread has finished
[2025-10-08 14:36:37] 2025-10-08 12:35:44,565 | INFO     | [payload] control thread has finished
[2025-10-08 14:36:37] 2025-10-08 12:35:44,653 | INFO     | [job] validate thread has finished
[2025-10-08 14:36:37] 2025-10-08 12:35:44,737 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 14:36:37] 2025-10-08 12:35:44,760 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 14:36:37] 2025-10-08 12:35:44,768 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 14:36:37] 2025-10-08 12:35:44,806 | INFO     | [data] copytool_in thread has finished
[2025-10-08 14:36:37] 2025-10-08 12:35:44,929 | INFO     | [payload] validate_post thread has finished
[2025-10-08 14:36:37] 2025-10-08 12:35:45,011 | INFO     | [job] queue monitor thread has finished
[2025-10-08 14:36:37] 2025-10-08 12:35:45,681 | INFO     | [data] copytool_out thread has finished
[2025-10-08 14:36:37] 2025-10-08 12:35:47,913 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 14:36:37] 2025-10-08 12:36:12,546 | INFO     | PID=9598 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-08 14:36:37] 2025-10-08 12:36:12,547 | INFO     | .. there are 9 such processes running
[2025-10-08 14:36:37] 2025-10-08 12:36:12,547 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 14:36:37] 2025-10-08 12:36:12,547 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 14:36:37] 2025-10-08 12:36:12,547 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 14:36:37] 2025-10-08 12:36:28,429 | INFO     | [monitor] cgroup control has ended
[2025-10-08 14:36:37] 2025-10-08 12:36:29,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157668980544)>', '<ExcThread(monitor, started 140156795352832)>']
[2025-10-08 14:36:37] 2025-10-08 12:36:29,648 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 14:36:37] 2025-10-08 12:36:29,649 | INFO     | [monitor] control thread has ended
[2025-10-08 14:36:37] 2025-10-08 12:36:34,651 | INFO     | all workflow threads have been joined
[2025-10-08 14:36:37] 2025-10-08 12:36:34,652 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 14:36:37] 2025-10-08 12:36:34,652 | INFO     | traces error code: 0
[2025-10-08 14:36:37] 2025-10-08 12:36:34,652 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 14:36:37] 2025-10-08 12:36:35,094 [wrapper] ==== pilot stdout END ====
[2025-10-08 14:36:37] 2025-10-08 12:36:35,202 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 14:36:37] 2025-10-08 12:36:35,284 [wrapper] pilotpid: 9598
[2025-10-08 14:36:37] 2025-10-08 12:36:35,336 [wrapper] Pilot exit status: 0
[2025-10-08 14:36:37] 2025-10-08 12:36:35,392 [wrapper] pandaids: 6831945987
[2025-10-08 14:36:37] 2025-10-08 12:36:35,441 [wrapper] cleanup supervisor_pilot  7669 9599
[2025-10-08 14:36:37] 2025-10-08 12:36:35,455 [wrapper] Test setup, not cleaning
[2025-10-08 14:36:37] 2025-10-08 12:36:35,579 [wrapper] apfmon messages muted
[2025-10-08 14:36:37] 2025-10-08 12:36:35,733 [wrapper] ==== wrapper stdout END ====
[2025-10-08 14:36:37] 2025-10-08 12:36:35,858 [wrapper] ==== wrapper stderr END ====
[2025-10-08 14:36:37]  *** Error codes and diagnostics ***
[2025-10-08 14:36:37]     "exeErrorCode": 0,
[2025-10-08 14:36:37]     "exeErrorDiag": "",
[2025-10-08 14:36:37]     "pilotErrorCode": 0,
[2025-10-08 14:36:37]     "pilotErrorDiag": "",
[2025-10-08 14:36:37]  *** Listing of results directory ***
[2025-10-08 14:36:37] total 391592
[2025-10-08 14:36:37] -rw-r--r--. 1 boinc boinc    552446 Oct  5 21:02 pilot3.tar.gz
[2025-10-08 14:36:37] -rwx------. 1 boinc boinc     36292 Oct  5 21:29 runpilot2-wrapper.sh
[2025-10-08 14:36:37] -rw-r--r--. 1 boinc boinc      5112 Oct  5 21:29 queuedata.json
[2025-10-08 14:36:37] -rw-r--r--. 1 boinc boinc       100 Oct  8 10:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 14:36:37] -rwxr-xr-x. 1 boinc boinc      7986 Oct  8 10:52 run_atlas
[2025-10-08 14:36:37] -rw-r--r--. 1 boinc boinc       105 Oct  8 10:52 job.xml
[2025-10-08 14:36:37] -rw-r--r--. 1 boinc boinc      6391 Oct  8 10:52 init_data.xml
[2025-10-08 14:36:37] -rw-r--r--. 2 boinc boinc 213250886 Oct  8 10:52 EVNT.46376901._003458.pool.root.1
[2025-10-08 14:36:37] -rw-r--r--. 2 boinc boinc     15120 Oct  8 10:52 start_atlas.sh
[2025-10-08 14:36:37] drwxrwx--x. 2 boinc boinc        68 Oct  8 10:52 shared
[2025-10-08 14:36:37] -rw-r--r--. 2 boinc boinc    565601 Oct  8 10:52 input.tar.gz
[2025-10-08 14:36:37] -rw-r--r--. 1 boinc boinc         0 Oct  8 10:52 boinc_lockfile
[2025-10-08 14:36:37] -rw-r--r--. 1 boinc boinc      2519 Oct  8 10:52 pandaJob.out
[2025-10-08 14:36:37] -rw-------. 1 boinc boinc    979817 Oct  8 10:55 agis_schedconf.cvmfs.json
[2025-10-08 14:36:37] drwx------. 4 boinc boinc      4096 Oct  8 10:56 pilot3
[2025-10-08 14:36:37] -rw-------. 1 boinc boinc 179439744 Oct  8 14:32 HITS.46376905._093894.pool.root.1
[2025-10-08 14:36:37] -rw-r--r--. 1 boinc boinc       531 Oct  8 14:33 boinc_task_state.xml
[2025-10-08 14:36:37] -rw-------. 1 boinc boinc      1014 Oct  8 14:33 memory_monitor_summary.json
[2025-10-08 14:36:37] -rw-------. 1 boinc boinc   1560401 Oct  8 14:33 agis_ddmendpoints.agis.ALL.json
[2025-10-08 14:36:37] -rw-------. 1 boinc boinc    450150 Oct  8 14:33 log.46376905._093894.job.log.tgz.1
[2025-10-08 14:36:37] -rw-------. 1 boinc boinc        95 Oct  8 14:35 pilot_heartbeat.json
[2025-10-08 14:36:37] -rw-------. 1 boinc boinc      7779 Oct  8 14:35 heartbeat.json
[2025-10-08 14:36:37] -rw-r--r--. 1 boinc boinc      8192 Oct  8 14:36 boinc_mmap_file
[2025-10-08 14:36:37] -rw-r--r--. 1 boinc boinc        28 Oct  8 14:36 wrapper_checkpoint.txt
[2025-10-08 14:36:37] -rw-------. 1 boinc boinc      4884 Oct  8 14:36 pilotlog.txt
[2025-10-08 14:36:37] -rw-------. 1 boinc boinc   1760697 Oct  8 14:36 log.46376905._093894.job.log.1
[2025-10-08 14:36:37] -rw-------. 1 boinc boinc       357 Oct  8 14:36 output.list
[2025-10-08 14:36:37] -rw-r--r--. 1 boinc boinc       620 Oct  8 14:36 runtime_log
[2025-10-08 14:36:37] -rw-------. 1 boinc boinc   2232320 Oct  8 14:36 result.tar.gz
[2025-10-08 14:36:37] -rw-r--r--. 1 boinc boinc      8717 Oct  8 14:36 runtime_log.err
[2025-10-08 14:36:37] -rw-------. 1 boinc boinc       656 Oct  8 14:36 1NFODmZbjP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmBJHMDmGQkAxn.diag
[2025-10-08 14:36:37] -rw-r--r--. 1 boinc boinc     20791 Oct  8 14:36 stderr.txt
[2025-10-08 14:36:37] HITS file was successfully produced:
[2025-10-08 14:36:37] -rw-------. 1 boinc boinc 179439744 Oct  8 14:32 shared/HITS.pool.root.1
[2025-10-08 14:36:37]  *** Contents of shared directory: ***
[2025-10-08 14:36:37] total 386244
[2025-10-08 14:36:37] -rw-r--r--. 2 boinc boinc 213250886 Oct  8 10:52 ATLAS.root_0
[2025-10-08 14:36:37] -rw-r--r--. 2 boinc boinc     15120 Oct  8 10:52 start_atlas.sh
[2025-10-08 14:36:37] -rw-r--r--. 2 boinc boinc    565601 Oct  8 10:52 input.tar.gz
[2025-10-08 14:36:37] -rw-------. 1 boinc boinc 179439744 Oct  8 14:32 HITS.pool.root.1
[2025-10-08 14:36:37] -rw-------. 1 boinc boinc   2232320 Oct  8 14:36 result.tar.gz
14:36:39 (5787): run_atlas exited; CPU time 48279.611591
14:36:39 (5787): called boinc_finish(0)

</stderr_txt>
]]>

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