Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:22:20 (26603): wrapper (7.7.26015): starting
14:22:20 (26603): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 14:22:20] Arguments: --nthreads 8
[2025-10-07 14:22:20] Threads: 8
[2025-10-07 14:22:20] Checking for CVMFS
[2025-10-07 14:22:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 14:22:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 14:22:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 14:22:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 14:22:22] 2.11.2.0 32446 100169 106616 151434 2 61 14841566 25165825 4632 130560 0 38212997 99.923 13919486 2519 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-07 14:22:22] CVMFS is ok
[2025-10-07 14:22:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 14:22:22] Checking for apptainer binary...
[2025-10-07 14:22:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 14:22:22] Running /usr/bin/apptainer --version
[2025-10-07 14:22:22] apptainer version 1.3.2-1.el7
[2025-10-07 14:22:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 14:22:40] cg-vwn269.simple-grid.lan
[2025-10-07 14:22:40] apptainer works
[2025-10-07 14:22:40] Set ATHENA_PROC_NUMBER=8
[2025-10-07 14:22:40] Set ATHENA_CORE_NUMBER=8
[2025-10-07 14:22:40] Starting ATLAS job with PandaID=6831946893
[2025-10-07 14:22:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 18:03:39]  *** The last 200 lines of the pilot log: ***
[2025-10-07 18:03:39] 2025-10-07 16:02:43,207 | INFO     | sum of square deviations: 2632440055.0
[2025-10-07 18:03:39] 2025-10-07 16:02:43,208 | INFO     | sum of deviations: 8680503648.49999
[2025-10-07 18:03:39] 2025-10-07 16:02:43,209 | INFO     | mean x: 1759846635.5
[2025-10-07 18:03:39] 2025-10-07 16:02:43,209 | INFO     | mean y: 2514067.955882353
[2025-10-07 18:03:39] 2025-10-07 16:02:43,209 | INFO     | -- intersect: -5800601984.484743
[2025-10-07 18:03:39] 2025-10-07 16:02:43,209 | INFO     | intersect: -5800601984.484743
[2025-10-07 18:03:39] 2025-10-07 16:02:43,209 | INFO     | chi2: 6.117424185096933
[2025-10-07 18:03:39] 2025-10-07 16:02:43,210 | INFO     | sum of square deviations: 2443580700.0
[2025-10-07 18:03:39] 2025-10-07 16:02:43,211 | INFO     | sum of deviations: 23151667330.0
[2025-10-07 18:03:39] 2025-10-07 16:02:43,212 | INFO     | mean x: 1759846483.0
[2025-10-07 18:03:39] 2025-10-07 16:02:43,212 | INFO     | mean y: 2525537.4824120603
[2025-10-07 18:03:39] 2025-10-07 16:02:43,212 | INFO     | -- intersect: -16671112589.667023
[2025-10-07 18:03:39] 2025-10-07 16:02:43,212 | INFO     | intersect: -16671112589.667023
[2025-10-07 18:03:39] 2025-10-07 16:02:43,212 | INFO     | chi2: 5.400033289145652
[2025-10-07 18:03:39] 2025-10-07 16:02:43,212 | INFO     | current chi2=5.400033289145652 (change=11.727009183031074 %)
[2025-10-07 18:03:39] 2025-10-07 16:02:43,212 | INFO     | right removable region: 198
[2025-10-07 18:03:39] 2025-10-07 16:02:43,213 | INFO     | sum of square deviations: 2443580700.0
[2025-10-07 18:03:39] 2025-10-07 16:02:43,220 | INFO     | sum of deviations: -59112421306.999985
[2025-10-07 18:03:39] 2025-10-07 16:02:43,221 | INFO     | mean x: 1759846788.0
[2025-10-07 18:03:39] 2025-10-07 16:02:43,221 | INFO     | mean y: 2568721.7085427134
[2025-10-07 18:03:39] 2025-10-07 16:02:43,221 | INFO     | -- intersect: 42574849951.473816
[2025-10-07 18:03:39] 2025-10-07 16:02:43,221 | INFO     | intersect: 42574849951.473816
[2025-10-07 18:03:39] 2025-10-07 16:02:43,221 | INFO     | chi2: 1.8316647227332328
[2025-10-07 18:03:39] 2025-10-07 16:02:43,222 | INFO     | current chi2=1.8316647227332328 (change=70.05823583076887 %)
[2025-10-07 18:03:39] 2025-10-07 16:02:43,222 | INFO     | sum of square deviations: 2263977332.5
[2025-10-07 18:03:39] 2025-10-07 16:02:43,223 | INFO     | sum of deviations: -83031056063.49998
[2025-10-07 18:03:39] 2025-10-07 16:02:43,224 | INFO     | mean x: 1759846940.5
[2025-10-07 18:03:39] 2025-10-07 16:02:43,224 | INFO     | mean y: 2588838.6134020616
[2025-10-07 18:03:39] 2025-10-07 16:02:43,224 | INFO     | -- intersect: 64544732384.93552
[2025-10-07 18:03:39] 2025-10-07 16:02:43,224 | INFO     | intersect: 64544732384.93552
[2025-10-07 18:03:39] 2025-10-07 16:02:43,224 | INFO     | chi2: 1.0051199775238313
[2025-10-07 18:03:39] 2025-10-07 16:02:43,224 | INFO     | current chi2=1.0051199775238313 (change=45.12532970422781 %)
[2025-10-07 18:03:39] 2025-10-07 16:02:43,225 | INFO     | sum of square deviations: 2093397390.0
[2025-10-07 18:03:39] 2025-10-07 16:02:43,226 | INFO     | sum of deviations: -83260548830.0
[2025-10-07 18:03:39] 2025-10-07 16:02:43,226 | INFO     | mean x: 1759847093.0
[2025-10-07 18:03:39] 2025-10-07 16:02:43,226 | INFO     | mean y: 2588996.6613756614
[2025-10-07 18:03:39] 2025-10-07 16:02:43,227 | INFO     | -- intersect: 69996865057.19476
[2025-10-07 18:03:39] 2025-10-07 16:02:43,227 | INFO     | intersect: 69996865057.19476
[2025-10-07 18:03:39] 2025-10-07 16:02:43,227 | INFO     | chi2: 0.9673518610345839
[2025-10-07 18:03:39] 2025-10-07 16:02:43,227 | INFO     | current chi2=0.9673518610345839 (change=3.757572959826271 %)
[2025-10-07 18:03:39] 2025-10-07 16:02:43,227 | INFO     | left removable region: 30
[2025-10-07 18:03:39] 2025-10-07 16:02:43,228 | INFO     | sum of square deviations: 1470248962.0
[2025-10-07 18:03:39] 2025-10-07 16:02:43,229 | INFO     | sum of deviations: -54827197506.5
[2025-10-07 18:03:39] 2025-10-07 16:02:43,229 | INFO     | mean x: 1759847367.5
[2025-10-07 18:03:39] 2025-10-07 16:02:43,229 | INFO     | mean y: 2590869.125
[2025-10-07 18:03:39] 2025-10-07 16:02:43,229 | INFO     | -- intersect: 65629230773.67783
[2025-10-07 18:03:39] 2025-10-07 16:02:43,229 | INFO     | intersect: 65629230773.67783
[2025-10-07 18:03:39] 2025-10-07 16:02:43,230 | INFO     | chi2: 0.16617110897652176
[2025-10-07 18:03:39] 2025-10-07 16:02:43,230 | INFO     | -- intersect: 65629230773.67783
[2025-10-07 18:03:39] 2025-10-07 16:02:43,230 | INFO     | current memory leak: -37.29 B/s (using 168 data points, chi2=0.17)
[2025-10-07 18:03:39] 2025-10-07 16:02:43,230 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-10-07 18:03:39] 2025-10-07 16:02:43,231 | INFO     | ..............................
[2025-10-07 18:03:39] 2025-10-07 16:02:43,231 | INFO     | . Timing measurements:
[2025-10-07 18:03:39] 2025-10-07 16:02:43,231 | INFO     | . get job = 0 s
[2025-10-07 18:03:39] 2025-10-07 16:02:43,231 | INFO     | . initial setup = 5 s
[2025-10-07 18:03:39] 2025-10-07 16:02:43,231 | INFO     | . payload setup = 135 s
[2025-10-07 18:03:39] 2025-10-07 16:02:43,231 | INFO     | . stage-in = 0 s
[2025-10-07 18:03:39] 2025-10-07 16:02:43,231 | INFO     | . payload execution = 12576 s
[2025-10-07 18:03:39] 2025-10-07 16:02:43,231 | INFO     | . stage-out = 5 s
[2025-10-07 18:03:39] 2025-10-07 16:02:43,232 | INFO     | . log creation = 1 s
[2025-10-07 18:03:39] 2025-10-07 16:02:43,232 | INFO     | ..............................
[2025-10-07 18:03:39] 2025-10-07 16:02:43,300 | INFO     | time since job start (12996s) is within the limit (172800.0s)
[2025-10-07 18:03:39] 2025-10-07 16:02:43,407 | INFO     | 
[2025-10-07 18:03:39] 2025-10-07 16:02:43,408 | INFO     | job summary report
[2025-10-07 18:03:39] 2025-10-07 16:02:43,408 | INFO     | --------------------------------------------------
[2025-10-07 18:03:39] 2025-10-07 16:02:43,408 | INFO     | PanDA job id: 6831946893
[2025-10-07 18:03:39] 2025-10-07 16:02:43,408 | INFO     | task id: 46376905
[2025-10-07 18:03:39] 2025-10-07 16:02:43,408 | INFO     | errors: (none)
[2025-10-07 18:03:39] 2025-10-07 16:02:43,408 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 18:03:39] 2025-10-07 16:02:43,409 | INFO     | pilot state: finished 
[2025-10-07 18:03:39] 2025-10-07 16:02:43,409 | INFO     | transexitcode: 0
[2025-10-07 18:03:39] 2025-10-07 16:02:43,409 | INFO     | exeerrorcode: 0
[2025-10-07 18:03:39] 2025-10-07 16:02:43,409 | INFO     | exeerrordiag: 
[2025-10-07 18:03:39] 2025-10-07 16:02:43,409 | INFO     | exitcode: 0
[2025-10-07 18:03:39] 2025-10-07 16:02:43,409 | INFO     | exitmsg: OK
[2025-10-07 18:03:39] 2025-10-07 16:02:43,409 | INFO     | cpuconsumptiontime: 47005 s
[2025-10-07 18:03:39] 2025-10-07 16:02:43,409 | INFO     | nevents: 400
[2025-10-07 18:03:39] 2025-10-07 16:02:43,409 | INFO     | neventsw: 0
[2025-10-07 18:03:39] 2025-10-07 16:02:43,410 | INFO     | pid: 4521
[2025-10-07 18:03:39] 2025-10-07 16:02:43,410 | INFO     | pgrp: 4521
[2025-10-07 18:03:39] 2025-10-07 16:02:43,410 | INFO     | corecount: 8
[2025-10-07 18:03:39] 2025-10-07 16:02:43,410 | INFO     | event service: False
[2025-10-07 18:03:39] 2025-10-07 16:02:43,410 | INFO     | sizes: {0: 2348646, 1: 2348845, 12: 2348845, 22: 2348873, 33: 2348901, 44: 2348957, 55: 2349113, 65: 2349141, 76: 2349169, 87: 2349225, 88: 2349515, 97: 2349823, 1
[2025-10-07 18:03:39] 2025-10-07 16:02:43,410 | INFO     | --------------------------------------------------
[2025-10-07 18:03:39] 2025-10-07 16:02:43,410 | INFO     | 
[2025-10-07 18:03:39] 2025-10-07 16:02:43,410 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-10-07 18:03:39] 2025-10-07 16:02:43,991 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 18:03:39] 2025-10-07 16:02:43,992 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 18:03:39] 2025-10-07 16:02:43,992 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 18:03:39] 2025-10-07 16:02:43,992 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 18:03:39] 2025-10-07 16:02:43,992 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 18:03:39] 2025-10-07 16:02:43,992 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 18:03:39] 2025-10-07 16:02:43,992 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 18:03:39] 2025-10-07 16:02:43,993 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 18:03:39] 2025-10-07 16:02:43,993 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 18:03:39] 2025-10-07 16:02:43,993 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 18:03:39] 2025-10-07 16:02:43,993 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 18:03:39] 2025-10-07 16:02:43,993 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 18:03:39] 2025-10-07 16:02:43,993 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 18:03:39] 2025-10-07 16:02:43,993 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 18:03:39] 2025-10-07 16:02:43,993 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 18:03:39] 2025-10-07 16:02:43,994 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 18:03:39] 2025-10-07 16:02:43,994 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 18:03:39] 2025-10-07 16:02:43,994 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 18:03:39] 2025-10-07 16:02:43,994 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 18:03:39] 2025-10-07 16:02:43,994 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 18:03:39] 2025-10-07 16:02:43,994 | INFO     | job 6831946893 has completed (purged errors)
[2025-10-07 18:03:39] 2025-10-07 16:02:43,994 | INFO     | overall cleanup function is called
[2025-10-07 18:03:39] 2025-10-07 16:02:45,003 | INFO     | --- collectZombieJob: --- 10, [4521]
[2025-10-07 18:03:39] 2025-10-07 16:02:45,004 | INFO     | zombie collector waiting for pid 4521
[2025-10-07 18:03:39] 2025-10-07 16:02:45,004 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 18:03:39] 2025-10-07 16:02:45,004 | INFO     | collected zombie processes
[2025-10-07 18:03:39] 2025-10-07 16:02:45,004 | INFO     | will attempt to kill all subprocesses of pid=4521
[2025-10-07 18:03:39] 2025-10-07 16:02:45,137 | INFO     | process IDs to be killed: [4521] (in reverse order)
[2025-10-07 18:03:39] 2025-10-07 16:02:46,167 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 18:03:39] 2025-10-07 16:02:46,167 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 18:03:39] 2025-10-07 16:02:46,170 | INFO     | did not find any defunct processes belonging to 4521
[2025-10-07 18:03:39] 2025-10-07 16:02:46,173 | INFO     | did not find any defunct processes belonging to 4521
[2025-10-07 18:03:39] 2025-10-07 16:02:46,174 | INFO     | ready for new job
[2025-10-07 18:03:39] 2025-10-07 16:02:46,174 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 18:03:39] 2025-10-07 16:02:46,176 | INFO     | ***************************************
[2025-10-07 18:03:39] 2025-10-07 16:02:46,176 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 18:03:39] 2025-10-07 16:02:46,176 | INFO     | ***************************************
[2025-10-07 18:03:39] 2025-10-07 16:02:46,176 | INFO     | 
[2025-10-07 18:03:39] 2025-10-07 16:02:46,177 | INFO     | pilot is running in a VM
[2025-10-07 18:03:39] 2025-10-07 16:02:46,177 | INFO     | architecture information:
[2025-10-07 18:03:39] 2025-10-07 16:02:46,186 | INFO     | executing command: cat /etc/os-release
[2025-10-07 18:03:39] 2025-10-07 16:02:46,466 | INFO     | cat /etc/os-release:
[2025-10-07 18:03:39] NAME="CentOS Linux"
[2025-10-07 18:03:39] VERSION="7 (Core)"
[2025-10-07 18:03:39] ID="centos"
[2025-10-07 18:03:39] ID_LIKE="rhel fedora"
[2025-10-07 18:03:39] VERSION_ID="7"
[2025-10-07 18:03:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 18:03:39] ANSI_COLOR="0;31"
[2025-10-07 18:03:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 18:03:39] HOME_URL="https://www.centos.org/"
[2025-10-07 18:03:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 18:03:39] 
[2025-10-07 18:03:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 18:03:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 18:03:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 18:03:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 18:03:39] 
[2025-10-07 18:03:39] 2025-10-07 16:02:46,466 | INFO     | ***************************************
[2025-10-07 18:03:39] 2025-10-07 16:02:46,970 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-10-07 18:03:39] 2025-10-07 16:02:47,215 | INFO     | sufficient remaining disk space (494884880384 B)
[2025-10-07 18:03:39] 2025-10-07 16:02:47,216 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 18:03:39] 2025-10-07 16:02:47,216 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 18:03:39] 2025-10-07 16:02:47,216 | INFO     | update_server=False
[2025-10-07 18:03:39] 2025-10-07 16:02:47,216 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 18:03:39] 2025-10-07 16:02:47,260 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-07 18:03:39] 2025-10-07 16:02:47,261 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-07 18:03:39] 2025-10-07 16:02:47,261 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 18:03:39] 2025-10-07 16:02:47,261 | INFO     | will abort loop
[2025-10-07 18:03:39] 2025-10-07 16:02:47,409 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 18:03:39] 2025-10-07 16:02:47,544 | INFO     | all data control threads have been joined
[2025-10-07 18:03:39] 2025-10-07 16:02:47,997 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 18:03:39] 2025-10-07 16:02:48,222 | INFO     | [job] retrieve thread has finished
[2025-10-07 18:03:39] 2025-10-07 16:02:48,267 | INFO     | [job] job monitor thread has finished
[2025-10-07 18:03:39] 2025-10-07 16:02:48,386 | INFO     | [job] validate thread has finished
[2025-10-07 18:03:39] 2025-10-07 16:02:48,412 | INFO     | all payload control threads have been joined
[2025-10-07 18:03:39] 2025-10-07 16:02:48,419 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 18:03:39] 2025-10-07 16:02:48,443 | INFO     | all job control threads have been joined
[2025-10-07 18:03:39] 2025-10-07 16:02:48,551 | INFO     | [data] control thread has finished
[2025-10-07 18:03:39] 2025-10-07 16:02:49,052 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 18:03:39] 2025-10-07 16:02:49,121 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 18:03:39] 2025-10-07 16:02:49,207 | INFO     | [payload] validate_post thread has finished
[2025-10-07 18:03:39] 2025-10-07 16:02:49,214 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 18:03:39] 2025-10-07 16:02:49,237 | INFO     | [payload] failed_post thread has finished
[2025-10-07 18:03:39] 2025-10-07 16:02:49,417 | INFO     | [data] copytool_out thread has finished
[2025-10-07 18:03:39] 2025-10-07 16:02:49,418 | INFO     | [payload] control thread has finished
[2025-10-07 18:03:39] 2025-10-07 16:02:49,426 | INFO     | [job] queue monitor thread has finished
[2025-10-07 18:03:39] 2025-10-07 16:02:49,438 | INFO     | [data] copytool_in thread has finished
[2025-10-07 18:03:39] 2025-10-07 16:02:49,450 | INFO     | [job] control thread has finished
[2025-10-07 18:03:39] 2025-10-07 16:02:49,645 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 18:03:39] 2025-10-07 16:02:52,007 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 18:03:39] 2025-10-07 16:03:16,453 | INFO     | PID=30353 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 18:03:39] 2025-10-07 16:03:16,454 | INFO     | .. there are 9 such processes running
[2025-10-07 18:03:39] 2025-10-07 16:03:16,455 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 18:03:39] 2025-10-07 16:03:16,455 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 18:03:39] 2025-10-07 16:03:16,455 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 18:03:39] 2025-10-07 16:03:29,244 | INFO     | [monitor] cgroup control has ended
[2025-10-07 18:03:39] 2025-10-07 16:03:30,418 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140008185378624)>', '<ExcThread(monitor, started 140007595562752)>']
[2025-10-07 18:03:39] 2025-10-07 16:03:30,540 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 18:03:39] 2025-10-07 16:03:30,541 | INFO     | [monitor] control thread has ended
[2025-10-07 18:03:39] 2025-10-07 16:03:35,444 | INFO     | all workflow threads have been joined
[2025-10-07 18:03:39] 2025-10-07 16:03:35,445 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 18:03:39] 2025-10-07 16:03:35,445 | INFO     | traces error code: 0
[2025-10-07 18:03:39] 2025-10-07 16:03:35,445 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 18:03:39] 2025-10-07 16:03:35,736 [wrapper] ==== pilot stdout END ====
[2025-10-07 18:03:39] 2025-10-07 16:03:35,775 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 18:03:39] 2025-10-07 16:03:35,868 [wrapper] pilotpid: 30353
[2025-10-07 18:03:39] 2025-10-07 16:03:35,909 [wrapper] Pilot exit status: 0
[2025-10-07 18:03:39] 2025-10-07 16:03:36,312 [wrapper] pandaids: 6831946893
[2025-10-07 18:03:39] 2025-10-07 16:03:36,994 [wrapper] cleanup supervisor_pilot 28153 30354
[2025-10-07 18:03:39] 2025-10-07 16:03:37,057 [wrapper] Test setup, not cleaning
[2025-10-07 18:03:39] 2025-10-07 16:03:37,127 [wrapper] apfmon messages muted
[2025-10-07 18:03:39] 2025-10-07 16:03:37,222 [wrapper] ==== wrapper stdout END ====
[2025-10-07 18:03:39] 2025-10-07 16:03:37,307 [wrapper] ==== wrapper stderr END ====
[2025-10-07 18:03:39]  *** Error codes and diagnostics ***
[2025-10-07 18:03:39]     "exeErrorCode": 0,
[2025-10-07 18:03:39]     "exeErrorDiag": "",
[2025-10-07 18:03:39]     "pilotErrorCode": 0,
[2025-10-07 18:03:39]     "pilotErrorDiag": "",
[2025-10-07 18:03:39]  *** Listing of results directory ***
[2025-10-07 18:03:39] total 390824
[2025-10-07 18:03:39] -rw-r--r--. 1 boinc boinc    552446 Oct  5 21:50 pilot3.tar.gz
[2025-10-07 18:03:39] -rw-r--r--. 1 boinc boinc      5112 Oct  5 22:04 queuedata.json
[2025-10-07 18:03:39] -rwx------. 1 boinc boinc     36292 Oct  5 22:05 runpilot2-wrapper.sh
[2025-10-07 18:03:39] -rw-r--r--. 1 boinc boinc       100 Oct  7 14:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 18:03:39] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 14:22 run_atlas
[2025-10-07 18:03:39] -rw-r--r--. 1 boinc boinc       105 Oct  7 14:22 job.xml
[2025-10-07 18:03:39] -rw-r--r--. 2 boinc boinc 215351684 Oct  7 14:22 EVNT.46376901._003491.pool.root.1
[2025-10-07 18:03:39] -rw-r--r--. 2 boinc boinc     15120 Oct  7 14:22 start_atlas.sh
[2025-10-07 18:03:39] drwxrwx--x. 2 boinc boinc        68 Oct  7 14:22 shared
[2025-10-07 18:03:39] -rw-r--r--. 2 boinc boinc    565601 Oct  7 14:22 input.tar.gz
[2025-10-07 18:03:39] -rw-r--r--. 1 boinc boinc      6391 Oct  7 14:22 init_data.xml
[2025-10-07 18:03:39] -rw-r--r--. 1 boinc boinc         0 Oct  7 14:22 boinc_lockfile
[2025-10-07 18:03:39] -rw-r--r--. 1 boinc boinc      2519 Oct  7 14:22 pandaJob.out
[2025-10-07 18:03:39] -rw-------. 1 boinc boinc    975010 Oct  7 14:26 agis_schedconf.cvmfs.json
[2025-10-07 18:03:39] drwx------. 4 boinc boinc      4096 Oct  7 14:26 pilot3
[2025-10-07 18:03:39] -rw-------. 1 boinc boinc 176611347 Oct  7 17:59 HITS.46376905._094718.pool.root.1
[2025-10-07 18:03:39] -rw-r--r--. 1 boinc boinc       531 Oct  7 18:00 boinc_task_state.xml
[2025-10-07 18:03:39] -rw-------. 1 boinc boinc      1011 Oct  7 18:01 memory_monitor_summary.json
[2025-10-07 18:03:39] -rw-------. 1 boinc boinc   1560401 Oct  7 18:01 agis_ddmendpoints.agis.ALL.json
[2025-10-07 18:03:39] -rw-------. 1 boinc boinc    444847 Oct  7 18:01 log.46376905._094718.job.log.tgz.1
[2025-10-07 18:03:39] -rw-------. 1 boinc boinc      7783 Oct  7 18:02 heartbeat.json
[2025-10-07 18:03:39] -rw-------. 1 boinc boinc        95 Oct  7 18:03 pilot_heartbeat.json
[2025-10-07 18:03:39] -rw-r--r--. 1 boinc boinc      8192 Oct  7 18:03 boinc_mmap_file
[2025-10-07 18:03:39] -rw-r--r--. 1 boinc boinc        28 Oct  7 18:03 wrapper_checkpoint.txt
[2025-10-07 18:03:39] -rw-------. 1 boinc boinc      5071 Oct  7 18:03 pilotlog.txt
[2025-10-07 18:03:39] -rw-------. 1 boinc boinc   1733843 Oct  7 18:03 log.46376905._094718.job.log.1
[2025-10-07 18:03:39] -rw-------. 1 boinc boinc       357 Oct  7 18:03 output.list
[2025-10-07 18:03:39] -rw-r--r--. 1 boinc boinc       620 Oct  7 18:03 runtime_log
[2025-10-07 18:03:39] -rw-------. 1 boinc boinc   2201600 Oct  7 18:03 result.tar.gz
[2025-10-07 18:03:39] -rw-r--r--. 1 boinc boinc      8717 Oct  7 18:03 runtime_log.err
[2025-10-07 18:03:39] -rw-------. 1 boinc boinc       656 Oct  7 18:03 2wiMDmj9jP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmmOHMDmf8FsQo.diag
[2025-10-07 18:03:39] -rw-r--r--. 1 boinc boinc     20659 Oct  7 18:03 stderr.txt
[2025-10-07 18:03:39] HITS file was successfully produced:
[2025-10-07 18:03:39] -rw-------. 1 boinc boinc 176611347 Oct  7 17:59 shared/HITS.pool.root.1
[2025-10-07 18:03:39]  *** Contents of shared directory: ***
[2025-10-07 18:03:39] total 385508
[2025-10-07 18:03:39] -rw-r--r--. 2 boinc boinc 215351684 Oct  7 14:22 ATLAS.root_0
[2025-10-07 18:03:39] -rw-r--r--. 2 boinc boinc     15120 Oct  7 14:22 start_atlas.sh
[2025-10-07 18:03:39] -rw-r--r--. 2 boinc boinc    565601 Oct  7 14:22 input.tar.gz
[2025-10-07 18:03:39] -rw-------. 1 boinc boinc 176611347 Oct  7 17:59 HITS.pool.root.1
[2025-10-07 18:03:39] -rw-------. 1 boinc boinc   2201600 Oct  7 18:03 result.tar.gz
18:03:40 (26603): run_atlas exited; CPU time 47182.149485
18:03:40 (26603): called boinc_finish(0)

</stderr_txt>
]]>

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