Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
03:18:28 (721311): wrapper (7.7.26015): starting
03:18:28 (721311): wrapper: running run_atlas (--nthreads 2)
[2025-10-06 03:18:28] Arguments: --nthreads 2
[2025-10-06 03:18:28] Threads: 2
[2025-10-06 03:18:28] Checking for CVMFS
[2025-10-06 03:18:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 03:18:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 03:18:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 03:18:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 03:18:29] 2.11.0.0 3910605 7769 60060 151381 2 56 4764155 6144001 0 130560 0 16973396 99.997 252311 474 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-06 03:18:29] CVMFS is ok
[2025-10-06 03:18:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 03:18:29] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-06 03:18:29] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-06 03:18:29] Further information can be found at the LHC@home message board.
[2025-10-06 03:18:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 03:18:29] Checking for apptainer binary...
[2025-10-06 03:18:29] apptainer is not installed, using version from CVMFS
[2025-10-06 03:18:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 03:18:29] mordor
[2025-10-06 03:18:29] apptainer works
[2025-10-06 03:18:29] Set ATHENA_PROC_NUMBER=2
[2025-10-06 03:18:29] Set ATHENA_CORE_NUMBER=2
[2025-10-06 03:18:29] Starting ATLAS job with PandaID=6831736564
[2025-10-06 03:18:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 08:17:23]  *** The last 200 lines of the pilot log: ***
[2025-10-06 08:17:23] 2025-10-06 06:16:49,896 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 08:17:23] 2025-10-06 06:16:49,914 | INFO     | time since job start (17893s) is within the limit (172800.0s)
[2025-10-06 08:17:23] 2025-10-06 06:16:50,987 | INFO     | PID=724949 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-06 08:17:23] 2025-10-06 06:16:51,561 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-06 08:17:23] 2025-10-06 06:16:51,561 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 2467.0855
[2025-10-06 08:17:23] 2025-10-06 06:16:51,562 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6831736564/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 08:17:23] 2025-10-06 06:16:51,562 | INFO     | extracted standard info from prmon json
[2025-10-06 08:17:23] 2025-10-06 06:16:51,562 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 08:17:23] 2025-10-06 06:16:51,563 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 08:17:23] 2025-10-06 06:16:51,563 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 08:17:23] 2025-10-06 06:16:51,563 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 08:17:23] 2025-10-06 06:16:51,566 | INFO     | fitting pss+swap vs Time
[2025-10-06 08:17:23] 2025-10-06 06:16:51,567 | INFO     | sum of square deviations: 7799680332.996553
[2025-10-06 08:17:23] 2025-10-06 06:16:51,568 | INFO     | sum of deviations: -101808282227.17067
[2025-10-06 08:17:23] 2025-10-06 06:16:51,568 | INFO     | mean x: 1759722444.003413
[2025-10-06 08:17:23] 2025-10-06 06:16:51,568 | INFO     | mean y: 2315207.170648464
[2025-10-06 08:17:23] 2025-10-06 06:16:51,569 | INFO     | -- intersect: 22971759026.896633
[2025-10-06 08:17:23] 2025-10-06 06:16:51,569 | INFO     | intersect: 22971759026.896633
[2025-10-06 08:17:23] 2025-10-06 06:16:51,569 | INFO     | chi2: 1.7640256858910321
[2025-10-06 08:17:23] 2025-10-06 06:16:51,569 | INFO     | sum of square deviations: 7407152347.996527
[2025-10-06 08:17:23] 2025-10-06 06:16:51,571 | INFO     | sum of deviations: -99821616362.8715
[2025-10-06 08:17:23] 2025-10-06 06:16:51,571 | INFO     | mean x: 1759722291.5034723
[2025-10-06 08:17:23] 2025-10-06 06:16:51,571 | INFO     | mean y: 2315978.371527778
[2025-10-06 08:17:23] 2025-10-06 06:16:51,571 | INFO     | -- intersect: 23717006217.619072
[2025-10-06 08:17:23] 2025-10-06 06:16:51,571 | INFO     | intersect: 23717006217.619072
[2025-10-06 08:17:23] 2025-10-06 06:16:51,571 | INFO     | chi2: 1.7563431144318944
[2025-10-06 08:17:23] 2025-10-06 06:16:51,571 | INFO     | current chi2=1.7563431144318944 (change=0.4355135824032624 %)
[2025-10-06 08:17:23] 2025-10-06 06:16:51,572 | INFO     | right removable region: 287
[2025-10-06 08:17:23] 2025-10-06 06:16:51,572 | INFO     | sum of square deviations: 7407151737.996527
[2025-10-06 08:17:23] 2025-10-06 06:16:51,573 | INFO     | sum of deviations: -121833077919.06941
[2025-10-06 08:17:23] 2025-10-06 06:16:51,573 | INFO     | mean x: 1759722596.5034723
[2025-10-06 08:17:23] 2025-10-06 06:16:51,574 | INFO     | mean y: 2322845.0694444445
[2025-10-06 08:17:23] 2025-10-06 06:16:51,574 | INFO     | -- intersect: 28946298586.241875
[2025-10-06 08:17:23] 2025-10-06 06:16:51,574 | INFO     | intersect: 28946298586.241875
[2025-10-06 08:17:23] 2025-10-06 06:16:51,574 | INFO     | chi2: 0.6633928361272217
[2025-10-06 08:17:23] 2025-10-06 06:16:51,574 | INFO     | current chi2=0.6633928361272217 (change=62.393243962763876 %)
[2025-10-06 08:17:23] 2025-10-06 06:16:51,574 | INFO     | sum of square deviations: 7028018742.996457
[2025-10-06 08:17:23] 2025-10-06 06:16:51,576 | INFO     | sum of deviations: -107503382203.59355
[2025-10-06 08:17:23] 2025-10-06 06:16:51,576 | INFO     | mean x: 1759722749.0035336
[2025-10-06 08:17:23] 2025-10-06 06:16:51,576 | INFO     | mean y: 2317079.593639576
[2025-10-06 08:17:23] 2025-10-06 06:16:51,576 | INFO     | -- intersect: 26919739211.827213
[2025-10-06 08:17:23] 2025-10-06 06:16:51,576 | INFO     | intersect: 26919739211.827213
[2025-10-06 08:17:23] 2025-10-06 06:16:51,576 | INFO     | chi2: 0.6353837708255893
[2025-10-06 08:17:23] 2025-10-06 06:16:51,576 | INFO     | current chi2=0.6353837708255893 (change=4.222093422826919 %)
[2025-10-06 08:17:23] 2025-10-06 06:16:51,577 | INFO     | left removable region: 20
[2025-10-06 08:17:23] 2025-10-06 06:16:51,577 | INFO     | sum of square deviations: 5902103434.99622
[2025-10-06 08:17:23] 2025-10-06 06:16:51,578 | INFO     | sum of deviations: -75711341353.77533
[2025-10-06 08:17:23] 2025-10-06 06:16:51,578 | INFO     | mean x: 1759722871.0037453
[2025-10-06 08:17:23] 2025-10-06 06:16:51,578 | INFO     | mean y: 2305090.775280899
[2025-10-06 08:17:23] 2025-10-06 06:16:51,578 | INFO     | -- intersect: 22575779182.168503
[2025-10-06 08:17:23] 2025-10-06 06:16:51,579 | INFO     | intersect: 22575779182.168503
[2025-10-06 08:17:23] 2025-10-06 06:16:51,579 | INFO     | chi2: 0.5409398246630727
[2025-10-06 08:17:23] 2025-10-06 06:16:51,579 | INFO     | -- intersect: 22575779182.168503
[2025-10-06 08:17:23] 2025-10-06 06:16:51,579 | INFO     | current memory leak: -12.83 B/s (using 267 data points, chi2=0.54)
[2025-10-06 08:17:23] 2025-10-06 06:16:51,579 | INFO     | could have reported an average CPU frequency of 2926 MHz (13 samples)
[2025-10-06 08:17:23] 2025-10-06 06:16:51,579 | INFO     | ..............................
[2025-10-06 08:17:23] 2025-10-06 06:16:51,579 | INFO     | . Timing measurements:
[2025-10-06 08:17:23] 2025-10-06 06:16:51,580 | INFO     | . get job = 0 s
[2025-10-06 08:17:23] 2025-10-06 06:16:51,580 | INFO     | . initial setup = 1 s
[2025-10-06 08:17:23] 2025-10-06 06:16:51,580 | INFO     | . payload setup = 3 s
[2025-10-06 08:17:23] 2025-10-06 06:16:51,580 | INFO     | . stage-in = 0 s
[2025-10-06 08:17:23] 2025-10-06 06:16:51,580 | INFO     | . payload execution = 17839 s
[2025-10-06 08:17:23] 2025-10-06 06:16:51,580 | INFO     | . stage-out = 2 s
[2025-10-06 08:17:23] 2025-10-06 06:16:51,580 | INFO     | . log creation = 0 s
[2025-10-06 08:17:23] 2025-10-06 06:16:51,580 | INFO     | ..............................
[2025-10-06 08:17:23] 2025-10-06 06:16:51,642 | INFO     | 
[2025-10-06 08:17:23] 2025-10-06 06:16:51,642 | INFO     | job summary report
[2025-10-06 08:17:23] 2025-10-06 06:16:51,642 | INFO     | --------------------------------------------------
[2025-10-06 08:17:23] 2025-10-06 06:16:51,642 | INFO     | PanDA job id: 6831736564
[2025-10-06 08:17:23] 2025-10-06 06:16:51,642 | INFO     | task id: 46376905
[2025-10-06 08:17:23] 2025-10-06 06:16:51,642 | INFO     | errors: (none)
[2025-10-06 08:17:23] 2025-10-06 06:16:51,643 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 08:17:23] 2025-10-06 06:16:51,643 | INFO     | pilot state: finished 
[2025-10-06 08:17:23] 2025-10-06 06:16:51,643 | INFO     | transexitcode: 0
[2025-10-06 08:17:23] 2025-10-06 06:16:51,643 | INFO     | exeerrorcode: 0
[2025-10-06 08:17:23] 2025-10-06 06:16:51,643 | INFO     | exeerrordiag: 
[2025-10-06 08:17:23] 2025-10-06 06:16:51,643 | INFO     | exitcode: 0
[2025-10-06 08:17:23] 2025-10-06 06:16:51,643 | INFO     | exitmsg: OK
[2025-10-06 08:17:23] 2025-10-06 06:16:51,643 | INFO     | cpuconsumptiontime: 34838 s
[2025-10-06 08:17:23] 2025-10-06 06:16:51,643 | INFO     | nevents: 400
[2025-10-06 08:17:23] 2025-10-06 06:16:51,643 | INFO     | neventsw: 0
[2025-10-06 08:17:23] 2025-10-06 06:16:51,643 | INFO     | pid: 731286
[2025-10-06 08:17:23] 2025-10-06 06:16:51,644 | INFO     | pgrp: 731286
[2025-10-06 08:17:23] 2025-10-06 06:16:51,644 | INFO     | corecount: 2
[2025-10-06 08:17:23] 2025-10-06 06:16:51,644 | INFO     | event service: False
[2025-10-06 08:17:23] 2025-10-06 06:16:51,644 | INFO     | sizes: {0: 2348823, 3: 2349085, 11: 2349113, 17847: 2381471, 17850: 2390483, 17852: 2390539, 17881: 2390861}
[2025-10-06 08:17:23] 2025-10-06 06:16:51,644 | INFO     | --------------------------------------------------
[2025-10-06 08:17:23] 2025-10-06 06:16:51,644 | INFO     | 
[2025-10-06 08:17:23] 2025-10-06 06:16:51,644 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-06 08:17:23] 2025-10-06 06:16:51,657 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 08:17:23] 2025-10-06 06:16:51,657 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 08:17:23] 2025-10-06 06:16:51,657 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 08:17:23] 2025-10-06 06:16:51,657 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 08:17:23] 2025-10-06 06:16:51,657 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 08:17:23] 2025-10-06 06:16:51,658 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 08:17:23] 2025-10-06 06:16:51,658 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 08:17:23] 2025-10-06 06:16:51,658 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 08:17:23] 2025-10-06 06:16:51,658 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 08:17:23] 2025-10-06 06:16:51,658 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 08:17:23] 2025-10-06 06:16:51,658 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 08:17:23] 2025-10-06 06:16:51,658 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 08:17:23] 2025-10-06 06:16:51,658 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 08:17:23] 2025-10-06 06:16:51,658 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 08:17:23] 2025-10-06 06:16:51,658 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 08:17:23] 2025-10-06 06:16:51,659 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 08:17:23] 2025-10-06 06:16:51,659 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 08:17:23] 2025-10-06 06:16:51,659 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 08:17:23] 2025-10-06 06:16:51,659 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 08:17:23] 2025-10-06 06:16:51,659 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 08:17:23] 2025-10-06 06:16:51,659 | INFO     | job 6831736564 has completed (purged errors)
[2025-10-06 08:17:23] 2025-10-06 06:16:51,659 | INFO     | overall cleanup function is called
[2025-10-06 08:17:23] 2025-10-06 06:16:52,664 | INFO     | --- collectZombieJob: --- 10, [731286]
[2025-10-06 08:17:23] 2025-10-06 06:16:52,664 | INFO     | zombie collector waiting for pid 731286
[2025-10-06 08:17:23] 2025-10-06 06:16:52,664 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 08:17:23] 2025-10-06 06:16:52,664 | INFO     | collected zombie processes
[2025-10-06 08:17:23] 2025-10-06 06:16:52,664 | INFO     | will attempt to kill all subprocesses of pid=731286
[2025-10-06 08:17:23] 2025-10-06 06:16:52,725 | INFO     | process IDs to be killed: [731286] (in reverse order)
[2025-10-06 08:17:23] 2025-10-06 06:16:52,753 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 08:17:23] 2025-10-06 06:16:52,753 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 08:17:23] 2025-10-06 06:16:52,754 | INFO     | did not find any defunct processes belonging to 731286
[2025-10-06 08:17:23] 2025-10-06 06:16:52,756 | INFO     | did not find any defunct processes belonging to 731286
[2025-10-06 08:17:23] 2025-10-06 06:16:52,756 | INFO     | ready for new job
[2025-10-06 08:17:23] 2025-10-06 06:16:52,756 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 08:17:23] 2025-10-06 06:16:52,758 | INFO     | ***************************************
[2025-10-06 08:17:23] 2025-10-06 06:16:52,758 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 08:17:23] 2025-10-06 06:16:52,758 | INFO     | ***************************************
[2025-10-06 08:17:23] 2025-10-06 06:16:52,758 | INFO     | 
[2025-10-06 08:17:23] 2025-10-06 06:16:52,775 | INFO     | architecture information:
[2025-10-06 08:17:23] 2025-10-06 06:16:52,775 | INFO     | executing command: cat /etc/os-release
[2025-10-06 08:17:23] 2025-10-06 06:16:52,787 | INFO     | cat /etc/os-release:
[2025-10-06 08:17:23] NAME="CentOS Linux"
[2025-10-06 08:17:23] VERSION="7 (Core)"
[2025-10-06 08:17:23] ID="centos"
[2025-10-06 08:17:23] ID_LIKE="rhel fedora"
[2025-10-06 08:17:23] VERSION_ID="7"
[2025-10-06 08:17:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 08:17:23] ANSI_COLOR="0;31"
[2025-10-06 08:17:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 08:17:23] HOME_URL="https://www.centos.org/"
[2025-10-06 08:17:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 08:17:23] 
[2025-10-06 08:17:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 08:17:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 08:17:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 08:17:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 08:17:23] 
[2025-10-06 08:17:23] 2025-10-06 06:16:52,787 | INFO     | ***************************************
[2025-10-06 08:17:23] 2025-10-06 06:16:53,289 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-06 08:17:23] 2025-10-06 06:16:53,301 | INFO     | sufficient remaining disk space (418604122112 B)
[2025-10-06 08:17:23] 2025-10-06 06:16:53,302 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 08:17:23] 2025-10-06 06:16:53,302 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 08:17:23] 2025-10-06 06:16:53,302 | INFO     | update_server=False
[2025-10-06 08:17:23] 2025-10-06 06:16:53,302 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 08:17:23] 2025-10-06 06:16:53,303 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 08:17:23] 2025-10-06 06:16:53,303 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 08:17:23] 2025-10-06 06:16:53,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 08:17:23] 2025-10-06 06:16:53,402 | INFO     | aborting loop
[2025-10-06 08:17:23] 2025-10-06 06:16:53,412 | INFO     | all payload control threads have been joined
[2025-10-06 08:17:23] 2025-10-06 06:16:53,909 | INFO     | all job control threads have been joined
[2025-10-06 08:17:23] 2025-10-06 06:16:54,159 | INFO     | all data control threads have been joined
[2025-10-06 08:17:23] 2025-10-06 06:16:54,307 | INFO     | [job] retrieve thread has finished
[2025-10-06 08:17:23] 2025-10-06 06:16:54,307 | INFO     | [job] queue monitor thread has finished
[2025-10-06 08:17:23] 2025-10-06 06:16:54,408 | INFO     | [job] job monitor thread has finished
[2025-10-06 08:17:23] 2025-10-06 06:16:54,417 | INFO     | [payload] control thread has finished
[2025-10-06 08:17:23] 2025-10-06 06:16:54,427 | INFO     | [data] copytool_in thread has finished
[2025-10-06 08:17:23] 2025-10-06 06:16:54,443 | INFO     | [payload] failed_post thread has finished
[2025-10-06 08:17:23] 2025-10-06 06:16:54,455 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 08:17:23] 2025-10-06 06:16:54,870 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 08:17:23] 2025-10-06 06:16:54,895 | INFO     | [job] validate thread has finished
[2025-10-06 08:17:23] 2025-10-06 06:16:54,915 | INFO     | [job] control thread has finished
[2025-10-06 08:17:23] 2025-10-06 06:16:55,164 | INFO     | [data] control thread has finished
[2025-10-06 08:17:23] 2025-10-06 06:16:55,306 | INFO     | [data] copytool_out thread has finished
[2025-10-06 08:17:23] 2025-10-06 06:16:55,380 | INFO     | [payload] validate_post thread has finished
[2025-10-06 08:17:23] 2025-10-06 06:16:55,480 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 08:17:23] 2025-10-06 06:16:55,628 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 08:17:23] 2025-10-06 06:16:58,875 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 08:17:23] 2025-10-06 06:17:03,793 | INFO     | job.realtimelogging is not enabled
[2025-10-06 08:17:23] 2025-10-06 06:17:04,799 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 08:17:23] 2025-10-06 06:17:06,231 | INFO     | [monitor] cgroup control has ended
[2025-10-06 08:17:23] 2025-10-06 06:17:06,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139866478094144)>', '<ExcThread(monitor, started 139866029397760)>']
[2025-10-06 08:17:23] 2025-10-06 06:17:11,831 | INFO     | all workflow threads have been joined
[2025-10-06 08:17:23] 2025-10-06 06:17:11,831 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 08:17:23] 2025-10-06 06:17:11,831 | INFO     | traces error code: 0
[2025-10-06 08:17:23] 2025-10-06 06:17:11,832 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 08:17:23] 2025-10-06 06:17:23,105 | INFO     | PID=724949 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-06 08:17:23] 2025-10-06 06:17:23,105 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 08:17:23] 2025-10-06 06:17:23,105 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 08:17:23] 2025-10-06 06:17:23,105 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 08:17:23] 2025-10-06 06:17:23,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 08:17:23] 2025-10-06 06:17:23,106 | INFO     | [monitor] control thread has ended
[2025-10-06 08:17:23] 2025-10-06 06:17:23,186 [wrapper] ==== pilot stdout END ====
[2025-10-06 08:17:23] 2025-10-06 06:17:23,188 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 08:17:23] 2025-10-06 06:17:23,189 [wrapper] pilotpid: 724949
[2025-10-06 08:17:23] 2025-10-06 06:17:23,190 [wrapper] Pilot exit status: 0
[2025-10-06 08:17:23] 2025-10-06 06:17:23,196 [wrapper] pandaids: 6831736564
[2025-10-06 08:17:23] 2025-10-06 06:17:23,210 [wrapper] cleanup supervisor_pilot  760369 724950
[2025-10-06 08:17:23] 2025-10-06 06:17:23,212 [wrapper] Test setup, not cleaning
[2025-10-06 08:17:23] 2025-10-06 06:17:23,213 [wrapper] apfmon messages muted
[2025-10-06 08:17:23] 2025-10-06 06:17:23,215 [wrapper] ==== wrapper stdout END ====
[2025-10-06 08:17:23] 2025-10-06 06:17:23,216 [wrapper] ==== wrapper stderr END ====
[2025-10-06 08:17:23]  *** Error codes and diagnostics ***
[2025-10-06 08:17:23]     "exeErrorCode": 0,
[2025-10-06 08:17:23]     "exeErrorDiag": "",
[2025-10-06 08:17:23]     "pilotErrorCode": 0,
[2025-10-06 08:17:23]     "pilotErrorDiag": "",
[2025-10-06 08:17:23]  *** Listing of results directory ***
[2025-10-06 08:17:23] total 394960
[2025-10-06 08:17:23] -rw-r--r-- 1 root root    552446 Oct  5 17:32 pilot3.tar.gz
[2025-10-06 08:17:23] -rwx------ 1 4871 1028     36292 Oct  5 17:39 runpilot2-wrapper.sh
[2025-10-06 08:17:23] -rw-r--r-- 1 root root      5112 Oct  5 17:39 queuedata.json
[2025-10-06 08:17:23] -rw-r--r-- 1 root root       100 Oct  6 03:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 08:17:23] -rwxr-xr-x 1 root root      7986 Oct  6 03:18 run_atlas
[2025-10-06 08:17:23] -rw-r--r-- 1 root root       105 Oct  6 03:18 job.xml
[2025-10-06 08:17:23] -rw-r--r-- 2 root root     15120 Oct  6 03:18 start_atlas.sh
[2025-10-06 08:17:23] drwxrwx--x 2 root root      4096 Oct  6 03:18 shared
[2025-10-06 08:17:23] -rw-r--r-- 2 root root    565602 Oct  6 03:18 input.tar.gz
[2025-10-06 08:17:23] -rw-r--r-- 1 root root      6136 Oct  6 03:18 init_data.xml
[2025-10-06 08:17:23] -rw-r--r-- 2 root root 216674499 Oct  6 03:18 EVNT.46376901._003252.pool.root.1
[2025-10-06 08:17:23] -rw-r--r-- 1 root root         0 Oct  6 03:18 boinc_lockfile
[2025-10-06 08:17:23] -rw-r--r-- 1 root root      2519 Oct  6 03:18 pandaJob.out
[2025-10-06 08:17:23] -rw------- 1 root root    974160 Oct  6 03:18 agis_schedconf.cvmfs.json
[2025-10-06 08:17:23] drwxr-xr-x 4  320  320      4096 Oct  6 03:18 pilot3
[2025-10-06 08:17:23] -rw------- 1 root root 178124008 Oct  6 08:15 HITS.46376905._088453.pool.root.1
[2025-10-06 08:17:23] -rw-r--r-- 1 root root       530 Oct  6 08:15 boinc_task_state.xml
[2025-10-06 08:17:23] -rw------- 1 root root      1033 Oct  6 08:16 memory_monitor_summary.json
[2025-10-06 08:17:23] -rw------- 1 root root   1560401 Oct  6 08:16 agis_ddmendpoints.agis.ALL.json
[2025-10-06 08:17:23] -rw------- 1 root root    421857 Oct  6 08:16 log.46376905._088453.job.log.tgz.1
[2025-10-06 08:17:23] -rw------- 1 root root        95 Oct  6 08:16 pilot_heartbeat.json
[2025-10-06 08:17:23] -rw------- 1 root root      7784 Oct  6 08:16 heartbeat.json
[2025-10-06 08:17:23] -rw-r--r-- 1 root root      8192 Oct  6 08:16 boinc_mmap_file
[2025-10-06 08:17:23] -rw-r--r-- 1 root root        28 Oct  6 08:16 wrapper_checkpoint.txt
[2025-10-06 08:17:23] -rw------- 1 root root       746 Oct  6 08:17 pilotlog.txt
[2025-10-06 08:17:23] -rw------- 1 root root   2457855 Oct  6 08:17 log.46376905._088453.job.log.1
[2025-10-06 08:17:23] -rw------- 1 root root       357 Oct  6 08:17 output.list
[2025-10-06 08:17:23] -rw-r--r-- 1 root root       620 Oct  6 08:17 runtime_log
[2025-10-06 08:17:23] -rw------- 1 root root   2897920 Oct  6 08:17 result.tar.gz
[2025-10-06 08:17:23] -rw-r--r-- 1 root root      8767 Oct  6 08:17 runtime_log.err
[2025-10-06 08:17:23] -rw------- 1 root root       654 Oct  6 08:17 ITdKDmj0fP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUwPNDmQfV7Tm.diag
[2025-10-06 08:17:23] -rw-r--r-- 1 root root     21364 Oct  6 08:17 stderr.txt
[2025-10-06 08:17:23] HITS file was successfully produced:
[2025-10-06 08:17:23] -rw------- 1 root root 178124008 Oct  6 08:15 shared/HITS.pool.root.1
[2025-10-06 08:17:23]  *** Contents of shared directory: ***
[2025-10-06 08:17:23] total 388960
[2025-10-06 08:17:23] -rw-r--r-- 2 root root     15120 Oct  6 03:18 start_atlas.sh
[2025-10-06 08:17:23] -rw-r--r-- 2 root root    565602 Oct  6 03:18 input.tar.gz
[2025-10-06 08:17:23] -rw-r--r-- 2 root root 216674499 Oct  6 03:18 ATLAS.root_0
[2025-10-06 08:17:23] -rw------- 1 root root 178124008 Oct  6 08:15 HITS.pool.root.1
[2025-10-06 08:17:23] -rw------- 1 root root   2897920 Oct  6 08:17 result.tar.gz
08:17:24 (721311): run_atlas exited; CPU time 34964.324590
08:17:24 (721311): called boinc_finish(0)

</stderr_txt>
]]>

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