Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
01:17:05 (1480): wrapper (7.7.26015): starting
01:17:05 (1480): wrapper: running run_atlas (--nthreads 8)
[2025-10-06 01:17:05] Arguments: --nthreads 8
[2025-10-06 01:17:05] Threads: 8
[2025-10-06 01:17:05] Checking for CVMFS
[2025-10-06 01:17:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 01:17:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 01:17:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 01:17:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 01:17:06] 2.11.0.0 26515 25133 71896 151379 3 59 3936340 4096001 5586 130560 0 8091335 99.828 2076572 320 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-10-06 01:17:06] CVMFS is ok
[2025-10-06 01:17:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 01:17:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 01:17:06] Further information can be found at the LHC@home message board.
[2025-10-06 01:17:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 01:17:06] Checking for apptainer binary...
[2025-10-06 01:17:06] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-10-06 01:17:06] apptainer is not installed, using version from CVMFS
[2025-10-06 01:17:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 01:17:06] WARNING: Environment variable TMPDIR already has value [/tmp/job_10199203/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node188
[2025-10-06 01:17:06] apptainer works
[2025-10-06 01:17:06] Set ATHENA_PROC_NUMBER=8
[2025-10-06 01:17:06] Set ATHENA_CORE_NUMBER=8
[2025-10-06 01:17:06] Starting ATLAS job with PandaID=6831736540
[2025-10-06 01:17:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10199203/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 01:58:20]  *** The last 200 lines of the pilot log: ***
[2025-10-06 01:58:20]  replicas=None
[2025-10-06 01:58:20]  scope=mc23_13p6TeV
[2025-10-06 01:58:20]  status=None
[2025-10-06 01:58:20]  status_code=0
[2025-10-06 01:58:20]  storage_token=
[2025-10-06 01:58:20]  surl=/tmp/job_10199203/atlas/pilot/slots/0/PanDA_Pilot-6831736540/log.46376905._088429.job.log.tgz.1
[2025-10-06 01:58:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/54/log.46376905._088429.job.log.tgz.1
[2025-10-06 01:58:20]  workdir=None
[2025-10-06 01:58:20] ]
[2025-10-06 01:58:20] 2025-10-05 23:57:39,975 | INFO     | transferring file log.46376905._088429.job.log.tgz.1 from /tmp/job_10199203/atlas/pilot/slots/0/PanDA_Pilot-6831736540/log.46376905._088429.job.log.tgz.1 to /tmp/j
[2025-10-06 01:58:20] 2025-10-05 23:57:39,975 | INFO     | executing command: /usr/bin/env mv /tmp/job_10199203/atlas/pilot/slots/0/PanDA_Pilot-6831736540/log.46376905._088429.job.log.tgz.1 /tmp/job_10199203/atlas/pilot/sl
[2025-10-06 01:58:20] 2025-10-05 23:57:39,983 | INFO     | adding to output.list: log.46376905._088429.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/54/log.46376905._088429.job.log.tg
[2025-10-06 01:58:20] 2025-10-05 23:57:39,983 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-06 01:58:20] 2025-10-05 23:57:39,983 | INFO     | summary of transferred files:
[2025-10-06 01:58:20] 2025-10-05 23:57:39,983 | INFO     |  -- lfn=log.46376905._088429.job.log.tgz.1, status_code=0, status=transferred
[2025-10-06 01:58:20] 2025-10-05 23:57:39,984 | INFO     | stage-out finished correctly
[2025-10-06 01:58:20] 2025-10-05 23:57:41,058 | INFO     | time since job start (2431s) is within the limit (172800.0s)
[2025-10-06 01:58:20] 2025-10-05 23:57:41,397 | WARNING  | process 27317 can no longer be monitored (due to stat problems) - aborting
[2025-10-06 01:58:20] 2025-10-05 23:57:41,397 | INFO     | using path: /tmp/job_10199203/atlas/pilot/slots/0/PanDA_Pilot-6831736540/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 01:58:20] 2025-10-05 23:57:41,491 | INFO     | number of running child processes to parent process 27317: 1
[2025-10-06 01:58:20] 2025-10-05 23:57:41,491 | INFO     | maximum number of monitored processes: 6
[2025-10-06 01:58:20] 2025-10-05 23:57:42,685 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-06 01:58:20] 2025-10-05 23:57:43,063 | INFO     | time since job start (2433s) is within the limit (172800.0s)
[2025-10-06 01:58:20] 2025-10-05 23:57:43,119 | INFO     | job 6831736540 has state=finished
[2025-10-06 01:58:20] 2025-10-05 23:57:43,119 | INFO     | preparing for final server update for job 6831736540 in state='finished'
[2025-10-06 01:58:20] 2025-10-05 23:57:43,119 | INFO     | this job has now completed (state=finished)
[2025-10-06 01:58:20] 2025-10-05 23:57:43,119 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-06 01:58:20] 2025-10-05 23:57:43,119 | INFO     | log transfer has been attempted: DONE
[2025-10-06 01:58:20] 2025-10-05 23:57:43,120 | INFO     | job 6831736540 has finished - writing final server update
[2025-10-06 01:58:20] 2025-10-05 23:57:43,120 | INFO     | total number of processed events: 400 (read)
[2025-10-06 01:58:20] 2025-10-05 23:57:43,120 | INFO     | executing command: lscpu
[2025-10-06 01:58:20] 2025-10-05 23:57:43,151 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-06 01:58:20] 2025-10-05 23:57:43,993 | INFO     | monitor loop #183: job 0:6831736540 is in state 'finished'
[2025-10-06 01:58:20] 2025-10-05 23:57:43,994 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 01:58:20] 2025-10-05 23:57:44,201 | INFO     | PID=6244 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-06 01:58:20] 2025-10-05 23:57:44,201 | INFO     | .. there are 3 such processes running
[2025-10-06 01:58:20] 2025-10-05 23:57:44,830 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-06 01:58:20] 2025-10-05 23:57:44,834 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2483.0956406249998
[2025-10-06 01:58:20] 2025-10-05 23:57:44,839 | INFO     | using path: /tmp/job_10199203/atlas/pilot/slots/0/PanDA_Pilot-6831736540/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 01:58:20] 2025-10-05 23:57:44,839 | INFO     | extracted standard info from prmon json
[2025-10-06 01:58:20] 2025-10-05 23:57:44,839 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 01:58:20] 2025-10-05 23:57:44,839 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 01:58:20] 2025-10-05 23:57:44,839 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 01:58:20] 2025-10-05 23:57:44,840 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 01:58:20] 2025-10-05 23:57:44,840 | INFO     | fitting pss+swap vs Time
[2025-10-06 01:58:20] 2025-10-05 23:57:44,840 | INFO     | sum of square deviations: 11133232.0
[2025-10-06 01:58:20] 2025-10-05 23:57:44,840 | INFO     | sum of deviations: 114668349.0
[2025-10-06 01:58:20] 2025-10-05 23:57:44,840 | INFO     | mean x: 1759707529.0
[2025-10-06 01:58:20] 2025-10-05 23:57:44,840 | INFO     | mean y: 2683449.3636363638
[2025-10-06 01:58:20] 2025-10-05 23:57:44,840 | INFO     | -- intersect: -18121681252.036606
[2025-10-06 01:58:20] 2025-10-05 23:57:44,840 | INFO     | intersect: -18121681252.036606
[2025-10-06 01:58:20] 2025-10-05 23:57:44,841 | INFO     | chi2: 0.00012936094914676335
[2025-10-06 01:58:20] 2025-10-05 23:57:44,841 | INFO     | -- intersect: -18121681252.036606
[2025-10-06 01:58:20] 2025-10-05 23:57:44,841 | INFO     | current memory leak: 10.30 B/s (using 33 data points, chi2=0.00)
[2025-10-06 01:58:20] 2025-10-05 23:57:44,841 | INFO     | could have reported an average CPU frequency of 2964 MHz (5 samples)
[2025-10-06 01:58:20] 2025-10-05 23:57:44,841 | INFO     | ..............................
[2025-10-06 01:58:20] 2025-10-05 23:57:44,841 | INFO     | . Timing measurements:
[2025-10-06 01:58:20] 2025-10-05 23:57:44,841 | INFO     | . get job = 0 s
[2025-10-06 01:58:20] 2025-10-05 23:57:44,841 | INFO     | . initial setup = 1 s
[2025-10-06 01:58:20] 2025-10-05 23:57:44,841 | INFO     | . payload setup = 2 s
[2025-10-06 01:58:20] 2025-10-05 23:57:44,841 | INFO     | . stage-in = 0 s
[2025-10-06 01:58:20] 2025-10-05 23:57:44,841 | INFO     | . payload execution = 2409 s
[2025-10-06 01:58:20] 2025-10-05 23:57:44,841 | INFO     | . stage-out = 0 s
[2025-10-06 01:58:20] 2025-10-05 23:57:44,841 | INFO     | . log creation = 0 s
[2025-10-06 01:58:20] 2025-10-05 23:57:44,841 | INFO     | ..............................
[2025-10-06 01:58:20] 2025-10-05 23:57:44,890 | INFO     | 
[2025-10-06 01:58:20] 2025-10-05 23:57:44,890 | INFO     | job summary report
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | --------------------------------------------------
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | PanDA job id: 6831736540
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | task id: 46376905
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | errors: (none)
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | pilot state: finished 
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | transexitcode: 0
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | exeerrorcode: 0
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | exeerrordiag: 
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | exitcode: 0
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | exitmsg: OK
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | cpuconsumptiontime: 17668 s
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | nevents: 400
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | neventsw: 0
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | pid: 27317
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | pgrp: 27317
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | corecount: 8
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | event service: False
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | sizes: {0: 2348942, 2: 2349204, 11: 2349232, 2414: 2374516, 2416: 2383544, 2419: 2383600, 2421: 2383954}
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | --------------------------------------------------
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | 
[2025-10-06 01:58:20] 2025-10-05 23:57:44,891 | INFO     | executing command: ls -lF /tmp/job_10199203/atlas/pilot/slots/0
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 01:58:20] 2025-10-05 23:57:44,901 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 01:58:20] 2025-10-05 23:57:44,902 | INFO     | job 6831736540 has completed (purged errors)
[2025-10-06 01:58:20] 2025-10-05 23:57:44,902 | INFO     | overall cleanup function is called
[2025-10-06 01:58:20] 2025-10-05 23:57:45,908 | INFO     | --- collectZombieJob: --- 10, [27317]
[2025-10-06 01:58:20] 2025-10-05 23:57:45,908 | INFO     | zombie collector waiting for pid 27317
[2025-10-06 01:58:20] 2025-10-05 23:57:45,908 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 01:58:20] 2025-10-05 23:57:45,908 | INFO     | collected zombie processes
[2025-10-06 01:58:20] 2025-10-05 23:57:45,908 | INFO     | will attempt to kill all subprocesses of pid=27317
[2025-10-06 01:58:20] 2025-10-05 23:57:46,007 | INFO     | process IDs to be killed: [27317] (in reverse order)
[2025-10-06 01:58:20] 2025-10-05 23:57:46,042 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 01:58:20] 2025-10-05 23:57:46,042 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 01:58:20] 2025-10-05 23:57:46,046 | INFO     | did not find any defunct processes belonging to 27317
[2025-10-06 01:58:20] 2025-10-05 23:57:46,049 | INFO     | did not find any defunct processes belonging to 27317
[2025-10-06 01:58:20] 2025-10-05 23:57:46,049 | INFO     | ready for new job
[2025-10-06 01:58:20] 2025-10-05 23:57:46,049 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 01:58:20] 2025-10-05 23:57:46,049 | INFO     | ***************************************
[2025-10-06 01:58:20] 2025-10-05 23:57:46,050 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 01:58:20] 2025-10-05 23:57:46,050 | INFO     | ***************************************
[2025-10-06 01:58:20] 2025-10-05 23:57:46,050 | INFO     | 
[2025-10-06 01:58:20] 2025-10-05 23:57:46,064 | INFO     | architecture information:
[2025-10-06 01:58:20] 2025-10-05 23:57:46,064 | INFO     | executing command: cat /etc/os-release
[2025-10-06 01:58:20] 2025-10-05 23:57:46,070 | INFO     | cat /etc/os-release:
[2025-10-06 01:58:20] NAME="CentOS Linux"
[2025-10-06 01:58:20] VERSION="7 (Core)"
[2025-10-06 01:58:20] ID="centos"
[2025-10-06 01:58:20] ID_LIKE="rhel fedora"
[2025-10-06 01:58:20] VERSION_ID="7"
[2025-10-06 01:58:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 01:58:20] ANSI_COLOR="0;31"
[2025-10-06 01:58:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 01:58:20] HOME_URL="https://www.centos.org/"
[2025-10-06 01:58:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 01:58:20] 
[2025-10-06 01:58:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 01:58:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 01:58:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 01:58:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 01:58:20] 
[2025-10-06 01:58:20] 2025-10-05 23:57:46,070 | INFO     | ***************************************
[2025-10-06 01:58:20] 2025-10-05 23:57:46,573 | INFO     | executing command: df -mP /tmp/job_10199203/atlas/pilot/slots/0
[2025-10-06 01:58:20] 2025-10-05 23:57:46,579 | INFO     | sufficient remaining disk space (224867123200 B)
[2025-10-06 01:58:20] 2025-10-05 23:57:46,579 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 01:58:20] 2025-10-05 23:57:46,579 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 01:58:20] 2025-10-05 23:57:46,579 | INFO     | update_server=False
[2025-10-06 01:58:20] 2025-10-05 23:57:46,580 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 01:58:20] 2025-10-05 23:57:46,580 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 01:58:20] 2025-10-05 23:57:46,934 | INFO     | all job control threads have been joined
[2025-10-06 01:58:20] 2025-10-05 23:57:47,046 | INFO     | all data control threads have been joined
[2025-10-06 01:58:20] 2025-10-05 23:57:47,357 | INFO     | all payload control threads have been joined
[2025-10-06 01:58:20] 2025-10-05 23:57:47,501 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 01:58:20] 2025-10-05 23:57:47,501 | INFO     | aborting loop
[2025-10-06 01:58:20] 2025-10-05 23:57:47,585 | INFO     | [job] retrieve thread has finished
[2025-10-06 01:58:20] 2025-10-05 23:57:47,585 | INFO     | [job] queue monitor thread has finished
[2025-10-06 01:58:20] 2025-10-05 23:57:47,602 | INFO     | [job] validate thread has finished
[2025-10-06 01:58:20] 2025-10-05 23:57:47,646 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 01:58:20] 2025-10-05 23:57:47,859 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 01:58:20] 2025-10-05 23:57:47,940 | INFO     | [job] control thread has finished
[2025-10-06 01:58:20] 2025-10-05 23:57:48,042 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 01:58:20] 2025-10-05 23:57:48,051 | INFO     | [data] control thread has finished
[2025-10-06 01:58:20] 2025-10-05 23:57:48,185 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 01:58:20] 2025-10-05 23:57:48,313 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 01:58:20] 2025-10-05 23:57:48,330 | INFO     | [data] copytool_in thread has finished
[2025-10-06 01:58:20] 2025-10-05 23:57:48,362 | INFO     | [payload] control thread has finished
[2025-10-06 01:58:20] 2025-10-05 23:57:48,507 | INFO     | [job] job monitor thread has finished
[2025-10-06 01:58:20] 2025-10-05 23:57:48,710 | INFO     | [payload] failed_post thread has finished
[2025-10-06 01:58:20] 2025-10-05 23:57:48,738 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 01:58:20] 2025-10-05 23:57:48,837 | INFO     | [payload] validate_post thread has finished
[2025-10-06 01:58:20] 2025-10-05 23:57:50,048 | INFO     | [data] copytool_out thread has finished
[2025-10-06 01:58:20] 2025-10-05 23:57:52,743 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 01:58:20] 2025-10-05 23:58:14,388 | INFO     | [monitor] cgroup control has ended
[2025-10-06 01:58:20] 2025-10-05 23:58:15,542 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456062646016)>']
[2025-10-06 01:58:20] 2025-10-05 23:58:16,384 | INFO     | PID=6244 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-06 01:58:20] 2025-10-05 23:58:16,384 | INFO     | .. there are 2 such processes running
[2025-10-06 01:58:20] 2025-10-05 23:58:16,385 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 01:58:20] 2025-10-05 23:58:16,385 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 01:58:20] 2025-10-05 23:58:16,385 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 01:58:20] 2025-10-05 23:58:16,385 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 01:58:20] 2025-10-05 23:58:16,385 | INFO     | [monitor] control thread has ended
[2025-10-06 01:58:20] 2025-10-05 23:58:20,567 | INFO     | all workflow threads have been joined
[2025-10-06 01:58:20] 2025-10-05 23:58:20,567 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 01:58:20] 2025-10-05 23:58:20,567 | INFO     | traces error code: 0
[2025-10-06 01:58:20] 2025-10-05 23:58:20,567 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 01:58:20] 2025-10-05 23:58:20,617 [wrapper] ==== pilot stdout END ====
[2025-10-06 01:58:20] 2025-10-05 23:58:20,618 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 01:58:20] 2025-10-05 23:58:20,620 [wrapper] pilotpid: 6244
[2025-10-06 01:58:20] 2025-10-05 23:58:20,621 [wrapper] Pilot exit status: 0
[2025-10-06 01:58:20] 2025-10-05 23:58:20,624 [wrapper] pandaids: 6831736540
[2025-10-06 01:58:20] 2025-10-05 23:58:20,648 [wrapper] cleanup supervisor_pilot  2471 6245
[2025-10-06 01:58:20] 2025-10-05 23:58:20,649 [wrapper] Test setup, not cleaning
[2025-10-06 01:58:20] 2025-10-05 23:58:20,650 [wrapper] apfmon messages muted
[2025-10-06 01:58:20] 2025-10-05 23:58:20,651 [wrapper] ==== wrapper stdout END ====
[2025-10-06 01:58:20] 2025-10-05 23:58:20,652 [wrapper] ==== wrapper stderr END ====
[2025-10-06 01:58:20]  *** Error codes and diagnostics ***
[2025-10-06 01:58:20]     "exeErrorCode": 0,
[2025-10-06 01:58:20]     "exeErrorDiag": "",
[2025-10-06 01:58:20]     "pilotErrorCode": 0,
[2025-10-06 01:58:20]     "pilotErrorDiag": "",
[2025-10-06 01:58:20]  *** Listing of results directory ***
[2025-10-06 01:58:20] total 387640
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user    552446 Oct  5 17:32 pilot3.tar.gz
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user      5112 Oct  5 17:39 queuedata.json
[2025-10-06 01:58:20] -rwx------ 1 mf493845 unix-user     36292 Oct  5 17:39 runpilot2-wrapper.sh
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user       100 Oct  6 00:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 01:58:20] -rwxr-xr-x 1 mf493845 unix-user      7986 Oct  6 00:22 run_atlas
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user       105 Oct  6 00:22 job.xml
[2025-10-06 01:58:20] -rw-r--r-- 2 mf493845 unix-user 213847963 Oct  6 01:17 EVNT.46376901._003251.pool.root.1
[2025-10-06 01:58:20] -rw-r--r-- 2 mf493845 unix-user     15120 Oct  6 01:17 start_atlas.sh
[2025-10-06 01:58:20] drwxrwx--x 2 mf493845 unix-user       100 Oct  6 01:17 shared
[2025-10-06 01:58:20] -rw-r--r-- 2 mf493845 unix-user    565602 Oct  6 01:17 input.tar.gz
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user      6389 Oct  6 01:17 init_data.xml
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user         0 Oct  6 01:17 boinc_setup_complete
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user      8192 Oct  6 01:17 boinc_mmap_file
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user         0 Oct  6 01:17 boinc_lockfile
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user      2519 Oct  6 01:17 pandaJob.out
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user    974144 Oct  6 01:17 agis_schedconf.cvmfs.json
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user   1560401 Oct  6 01:17 agis_ddmendpoints.agis.ALL.json
[2025-10-06 01:58:20] drwx------ 4 mf493845 unix-user       400 Oct  6 01:17 pilot3
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user 177841174 Oct  6 01:57 HITS.46376905._088429.pool.root.1
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user      1013 Oct  6 01:57 memory_monitor_summary.json
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user    300862 Oct  6 01:57 log.46376905._088429.job.log.tgz.1
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user      7763 Oct  6 01:57 heartbeat.json
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user        95 Oct  6 01:58 pilot_heartbeat.json
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user      4834 Oct  6 01:58 pilotlog.txt
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user    398015 Oct  6 01:58 log.46376905._088429.job.log.1
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user       357 Oct  6 01:58 output.list
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user       620 Oct  6 01:58 runtime_log
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user    716800 Oct  6 01:58 result.tar.gz
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user      9076 Oct  6 01:58 runtime_log.err
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user       639 Oct  6 01:58 FWQKDmk0fP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjwPNDmyijkzm.diag
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user     22417 Oct  6 01:58 stderr.txt
[2025-10-06 01:58:20] HITS file was successfully produced:
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user 177841174 Oct  6 01:57 shared/HITS.pool.root.1
[2025-10-06 01:58:20]  *** Contents of shared directory: ***
[2025-10-06 01:58:20] total 383784
[2025-10-06 01:58:20] -rw-r--r-- 2 mf493845 unix-user 213847963 Oct  6 01:17 ATLAS.root_0
[2025-10-06 01:58:20] -rw-r--r-- 2 mf493845 unix-user     15120 Oct  6 01:17 start_atlas.sh
[2025-10-06 01:58:20] -rw-r--r-- 2 mf493845 unix-user    565602 Oct  6 01:17 input.tar.gz
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user 177841174 Oct  6 01:57 HITS.pool.root.1
[2025-10-06 01:58:20] -rw------- 1 mf493845 unix-user    716800 Oct  6 01:58 result.tar.gz
01:58:22 (1480): run_atlas exited; CPU time 17704.325007
01:58:22 (1480): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN