Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-09 06:49:39 (6804): vboxwrapper version 26210
2025-10-09 06:49:39 (6804): BOINC client version: 8.0.2
2025-10-09 06:49:40 (6804): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2025-10-09 06:49:40 (6804): Successfully copied 'init_data.xml' to the shared directory.
2025-10-09 06:49:40 (6804): Create VM. (boinc_57108bfae0f3f747, slot#2)
2025-10-09 06:49:41 (6804): Setting Memory Size for VM. (4800MB)
2025-10-09 06:49:41 (6804): Setting CPU Count for VM. (8)
2025-10-09 06:49:41 (6804): Setting Chipset Options for VM.
2025-10-09 06:49:41 (6804): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-09 06:49:42 (6804): Setting Boot Options for VM.
2025-10-09 06:49:42 (6804): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-09 06:49:42 (6804): Enabling VM Network Access.
2025-10-09 06:49:43 (6804): Disabling USB Support for VM.
2025-10-09 06:49:43 (6804): Disabling COM Port Support for VM.
2025-10-09 06:49:43 (6804): Disabling LPT Port Support for VM.
2025-10-09 06:49:44 (6804): Disabling Audio Support for VM.
2025-10-09 06:49:44 (6804): Disabling Clipboard Support for VM.
2025-10-09 06:49:44 (6804): Disabling Drag and Drop Support for VM.
2025-10-09 06:49:44 (6804): Adding storage controller(s) to VM.
2025-10-09 06:49:45 (6804): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-09 06:49:47 (6804): Adding VirtualBox Guest Additions to VM.
2025-10-09 06:49:47 (6804): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-09 06:49:47 (6804): forwarding host port 52361 to guest port 80
2025-10-09 06:49:47 (6804): Enabling remote desktop for VM.
2025-10-09 06:49:48 (6804): Required extension pack not installed, remote desktop not enabled.
2025-10-09 06:49:48 (6804): Enabling shared directory for VM.
2025-10-09 06:49:48 (6804): Starting VM using VBoxManage interface. (boinc_57108bfae0f3f747, slot#2)
2025-10-09 06:49:54 (6804): Successfully started VM. (PID = '12024')
2025-10-09 06:49:54 (6804): Reporting VM Process ID to BOINC.
2025-10-09 06:49:54 (6804): Guest Log: BIOS: VirtualBox 7.1.10
2025-10-09 06:49:54 (6804): Guest Log: CPUID EDX: 0x178bfbff
2025-10-09 06:49:54 (6804): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-09 06:49:54 (6804): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-09 06:49:54 (6804): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-09 06:49:54 (6804): Detected: Web Application Enabled (http://localhost:52361)
2025-10-09 06:49:54 (6804): Preference change detected
2025-10-09 06:49:54 (6804): Setting CPU throttle for VM. (100%)
2025-10-09 06:49:54 (6804): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-09 06:49:56 (6804): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-09 06:49:56 (6804): Guest Log: BIOS: Booting from Hard Disk...
2025-10-09 06:49:58 (6804): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-09 06:49:58 (6804): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-09 06:49:58 (6804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-09 06:50:04 (6804): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-09 06:50:04 (6804): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-09 06:50:10 (6804): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-09 06:50:10 (6804): Guest Log: 00:00:00.000146 main     Log opened 2025-10-09T06:50:08.541605000Z
2025-10-09 06:50:10 (6804): Guest Log: 00:00:00.000249 main     OS Product: Linux
2025-10-09 06:50:10 (6804): Guest Log: 00:00:00.000407 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-09 06:50:10 (6804): Guest Log: 00:00:00.000445 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-09 06:50:10 (6804): Guest Log: 00:00:00.000476 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-09 06:50:10 (6804): Guest Log: 00:00:00.000477 main     Process ID: 1377
2025-10-09 06:50:10 (6804): Guest Log: 00:00:00.000478 main     Package type: LINUX_64BITS_GENERIC
2025-10-09 06:50:10 (6804): Guest Log: 00:00:00.001362 main     5.2.32 r132073 started. Verbose level = 0
2025-10-09 06:50:10 (6804): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-09 06:50:10 (6804): Guest Log: [INFO] Mounting shared directory
2025-10-09 06:50:11 (6804): Guest Log: [INFO] Checking for init_data.xml
2025-10-09 06:50:18 (6804): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-09 06:50:18 (6804): Guest Log: [INFO] Detected branch: prod
2025-10-09 06:50:18 (6804): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-09 06:50:18 (6804): Guest Log: Copying input files
2025-10-09 06:50:20 (6804): Guest Log: Copied input files into RunAtlas.
2025-10-09 06:50:20 (6804): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-09 06:50:20 (6804): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-09 06:50:20 (6804): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-09 06:50:20 (6804): Guest Log: Further information can be found at the LHC@home message board.
2025-10-09 06:50:20 (6804): Guest Log: 00:00:10.003460 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 404 407 000ns (GuestNow=1 760 017 819 948 632 000 ns GuestLast=1 759 992 608 544 225 000 ns fSetTimeLastLoop=true )
2025-10-09 06:50:29 (6804): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-09 06:50:29 (6804): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-09 06:50:29 (6804): Guest Log: 2.6.3.0 1659 0 32156 151513 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-09 06:50:30 (6804): Guest Log: copied the webapp to /var/www
2025-10-09 06:50:30 (6804): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-09 06:50:30 (6804): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-09 06:50:30 (6804): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-09 06:50:30 (6804): Guest Log:  *** Starting ATLAS job. (PandaID=6831789094 taskID=46376905) ***
2025-10-09 08:30:05 (6804): Status Report: Elapsed Time: '6000.000000'
2025-10-09 08:30:05 (6804): Status Report: CPU Time: '41672.187500'
2025-10-09 08:56:18 (6804): Guest Log:  *** Job finished ***
2025-10-09 08:56:18 (6804): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:02,792 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:02,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:10,435 | INFO     | [monitor] cgroup control has ended
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:10,618 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140096182474560)>', '<ExcThread(monitor, started 140095382349568)>']
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:10,865 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:10,866 | INFO     | [monitor] control thread has ended
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:15,647 | INFO     | all workflow threads have been joined
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:15,648 | INFO     | end of generic workflow (traces error code: 0)
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:15,648 | INFO     | traces error code: 0
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:15,648 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:15,757 [wrapper] ==== pilot stdout END ====
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:15,762 [wrapper] ==== wrapper stdout RESUME ====
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:15,767 [wrapper] pilotpid: 6076
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:15,772 [wrapper] Pilot exit status: 0
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:15,814 [wrapper] pandaids: 6831789094
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:15,846 [wrapper] cleanup supervisor_pilot  5261 6077
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:15,853 [wrapper] Test setup, not cleaning
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:15,857 [wrapper] apfmon messages muted
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:15,862 [wrapper] ==== wrapper stdout END ====
2025-10-09 08:56:18 (6804): Guest Log: 2025-10-09 15:56:15,866 [wrapper] ==== wrapper stderr END ====
2025-10-09 08:56:18 (6804): Guest Log:  *** Error codes and diagnostics ***
2025-10-09 08:56:18 (6804): Guest Log:     "exeErrorCode": 0,
2025-10-09 08:56:18 (6804): Guest Log:     "exeErrorDiag": "",
2025-10-09 08:56:18 (6804): Guest Log:     "pilotErrorCode": 0,
2025-10-09 08:56:18 (6804): Guest Log:     "pilotErrorDiag": "",
2025-10-09 08:56:18 (6804): Guest Log:  *** Listing of results directory ***
2025-10-09 08:56:18 (6804): Guest Log: total 187208
2025-10-09 08:56:18 (6804): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  5 17:07 pilot3.tar.gz
2025-10-09 08:56:18 (6804): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  5 17:21 runpilot2-wrapper.sh
2025-10-09 08:56:18 (6804): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  5 17:21 queuedata.json
2025-10-09 08:56:18 (6804): Guest Log: -rwxr-xr-x. 1 atlas atlas      9127 Oct  9 13:50 init_data.xml
2025-10-09 08:56:18 (6804): Guest Log: -rwxr-xr-x. 1 atlas atlas    565602 Oct  9 13:50 input.tar.gz
2025-10-09 08:56:18 (6804): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct  9 13:50 start_atlas.sh
2025-10-09 08:56:18 (6804): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  9 13:50 EVNT.46376901._003359.pool.root.1 -> /data/./ATLAS.root_0
2025-10-09 08:56:18 (6804): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Oct  9 13:50 pandaJob.out
2025-10-09 08:56:18 (6804): Guest Log: -rw-------. 1 atlas atlas    975462 Oct  9 13:50 agis_schedconf.cvmfs.json
2025-10-09 08:56:18 (6804): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  9 13:51 agis_ddmendpoints.agis.ALL.json
2025-10-09 08:56:18 (6804): Guest Log: drwx------. 4 atlas atlas      4096 Oct  9 13:51 pilot3
2025-10-09 08:56:18 (6804): Guest Log: -rw-------. 1 atlas atlas 185178591 Oct  9 15:54 HITS.46376905._091180.pool.root.1
2025-10-09 08:56:18 (6804): Guest Log: -rw-------. 1 atlas atlas      1029 Oct  9 15:55 memory_monitor_summary.json
2025-10-09 08:56:18 (6804): Guest Log: -rw-------. 1 atlas atlas    354711 Oct  9 15:55 log.46376905._091180.job.log.tgz.1
2025-10-09 08:56:18 (6804): Guest Log: -rw-------. 1 atlas atlas        95 Oct  9 15:55 pilot_heartbeat.json
2025-10-09 08:56:18 (6804): Guest Log: -rw-------. 1 atlas atlas      7781 Oct  9 15:55 heartbeat.json
2025-10-09 08:56:18 (6804): Guest Log: -rw-------. 1 atlas atlas      5063 Oct  9 15:56 pilotlog.txt
2025-10-09 08:56:18 (6804): Guest Log: -rw-------. 1 atlas atlas    995332 Oct  9 15:56 log.46376905._091180.job.log.1
2025-10-09 08:56:18 (6804): Guest Log: -rw-------. 1 atlas atlas       357 Oct  9 15:56 output.list
2025-10-09 08:56:18 (6804): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  9 15:56 runtime_log
2025-10-09 08:56:18 (6804): Guest Log: -rw-------. 1 atlas atlas   1372160 Oct  9 15:56 result.tar.gz
2025-10-09 08:56:18 (6804): Guest Log: -rw-------. 1 atlas atlas       661 Oct  9 15:56 wbpNDmYbhP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmBxGMDm9HBPan.diag
2025-10-09 08:56:18 (6804): Guest Log: -rw-r--r--. 1 atlas atlas      8647 Oct  9 15:56 runtime_log.err
2025-10-09 08:56:18 (6804): Guest Log: Looking for outputfile HITS.46376905._091180.pool.root.1
2025-10-09 08:56:18 (6804): Guest Log: HITS file was successfully produced
2025-10-09 08:56:18 (6804): Guest Log: -rw-------. 1 atlas atlas 185178591 Oct  9 15:54 /home/atlas/RunAtlas/HITS.46376905._091180.pool.root.1
2025-10-09 08:56:18 (6804): Guest Log: Successfully finished the ATLAS job!
2025-10-09 08:56:18 (6804): Guest Log: Copying the results back to the shared directory!
2025-10-09 08:56:18 (6804): Guest Log:  *** Contents of shared directory: ***
2025-10-09 08:56:18 (6804): Guest Log: total 392388
2025-10-09 08:56:18 (6804): Guest Log: -rwxrwxrwx. 1 root root 214651575 Oct  9 13:49 ATLAS.root_0
2025-10-09 08:56:18 (6804): Guest Log: -rwxrwxrwx. 1 root root 185178591 Oct  9 15:56 HITS.pool.root.1
2025-10-09 08:56:18 (6804): Guest Log: -rwxrwxrwx. 1 root root      9127 Oct  9 13:49 init_data.xml
2025-10-09 08:56:18 (6804): Guest Log: -rwxrwxrwx. 1 root root    565602 Oct  5 20:36 input.tar.gz
2025-10-09 08:56:18 (6804): Guest Log: -rwxrwxrwx. 1 root root   1372160 Oct  9 15:56 result.tar.gz
2025-10-09 08:56:18 (6804): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  5 20:36 start_atlas.sh
2025-10-09 08:56:18 (6804): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-09 08:56:18 (6804): VM Completion File Detected.
2025-10-09 08:56:18 (6804): Powering off VM.
2025-10-09 08:56:19 (6804): Successfully stopped VM.
2025-10-09 08:56:19 (6804): Deregistering VM. (boinc_57108bfae0f3f747, slot#2)
2025-10-09 08:56:19 (6804): Removing network bandwidth throttle group from VM.
2025-10-09 08:56:19 (6804): Removing VM from VirtualBox.
2025-10-09 08:56:24 (6804): called boinc_finish(0)

</stderr_txt>
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