Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:06:31 (8794): wrapper (7.7.26015): starting
08:06:31 (8794): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 08:06:31] Arguments: --nthreads 8
[2025-10-07 08:06:31] Threads: 8
[2025-10-07 08:06:31] Checking for CVMFS
[2025-10-07 08:06:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 08:06:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 08:06:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 08:06:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 08:06:33] 2.11.2.0 13026 212952 138580 151425 0 61 23205253 25165825 4632 130560 0 117442771 99.886 63359405 3636 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-07 08:06:33] CVMFS is ok
[2025-10-07 08:06:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 08:06:33] Checking for apptainer binary...
[2025-10-07 08:06:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 08:06:33] Running /usr/bin/apptainer --version
[2025-10-07 08:06:33] apptainer version 1.3.2-1.el7
[2025-10-07 08:06:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 08:06:39] cg-vwn329.simple-grid.lan
[2025-10-07 08:06:39] apptainer works
[2025-10-07 08:06:39] Set ATHENA_PROC_NUMBER=8
[2025-10-07 08:06:39] Set ATHENA_CORE_NUMBER=8
[2025-10-07 08:06:39] Starting ATLAS job with PandaID=6831456215
[2025-10-07 08:06:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 11:57:38]  *** The last 200 lines of the pilot log: ***
[2025-10-07 11:57:38] 2025-10-07 09:56:36,748 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 11:57:38] 2025-10-07 09:56:36,759 | INFO     | fitting pss+swap vs Time
[2025-10-07 11:57:38] 2025-10-07 09:56:36,760 | INFO     | sum of square deviations: 2996454322.0
[2025-10-07 11:57:38] 2025-10-07 09:56:36,762 | INFO     | sum of deviations: 87389444118.0
[2025-10-07 11:57:38] 2025-10-07 09:56:36,763 | INFO     | mean x: 1759824362.0
[2025-10-07 11:57:38] 2025-10-07 09:56:36,763 | INFO     | mean y: 2409246.0422535213
[2025-10-07 11:57:38] 2025-10-07 09:56:36,763 | INFO     | -- intersect: -51321607813.50897
[2025-10-07 11:57:38] 2025-10-07 09:56:36,763 | INFO     | intersect: -51321607813.50897
[2025-10-07 11:57:38] 2025-10-07 09:56:36,763 | INFO     | chi2: 6.448751756953926
[2025-10-07 11:57:38] 2025-10-07 09:56:36,764 | INFO     | sum of square deviations: 2790348132.0
[2025-10-07 11:57:38] 2025-10-07 09:56:36,766 | INFO     | sum of deviations: 99528446863.0
[2025-10-07 11:57:38] 2025-10-07 09:56:36,766 | INFO     | mean x: 1759824209.5
[2025-10-07 11:57:38] 2025-10-07 09:56:36,766 | INFO     | mean y: 2418019.278846154
[2025-10-07 11:57:38] 2025-10-07 09:56:36,766 | INFO     | -- intersect: -62768448567.142395
[2025-10-07 11:57:38] 2025-10-07 09:56:36,766 | INFO     | intersect: -62768448567.142395
[2025-10-07 11:57:38] 2025-10-07 09:56:36,767 | INFO     | chi2: 5.658950790364484
[2025-10-07 11:57:38] 2025-10-07 09:56:36,767 | INFO     | current chi2=5.658950790364484 (change=12.247346406810752 %)
[2025-10-07 11:57:38] 2025-10-07 09:56:36,767 | INFO     | right removable region: 207
[2025-10-07 11:57:38] 2025-10-07 09:56:36,767 | INFO     | sum of square deviations: 2790348132.0
[2025-10-07 11:57:38] 2025-10-07 09:56:36,769 | INFO     | sum of deviations: 15781141823.000008
[2025-10-07 11:57:38] 2025-10-07 09:56:36,769 | INFO     | mean x: 1759824514.5
[2025-10-07 11:57:38] 2025-10-07 09:56:36,769 | INFO     | mean y: 2462174.528846154
[2025-10-07 11:57:38] 2025-10-07 09:56:36,769 | INFO     | -- intersect: -9950432207.510445
[2025-10-07 11:57:38] 2025-10-07 09:56:36,769 | INFO     | intersect: -9950432207.510445
[2025-10-07 11:57:38] 2025-10-07 09:56:36,770 | INFO     | chi2: 1.83394293305401
[2025-10-07 11:57:38] 2025-10-07 09:56:36,770 | INFO     | current chi2=1.83394293305401 (change=71.56127259703551 %)
[2025-10-07 11:57:38] 2025-10-07 09:56:36,770 | INFO     | sum of square deviations: 2593916542.0
[2025-10-07 11:57:38] 2025-10-07 09:56:36,772 | INFO     | sum of deviations: -10636208392.0
[2025-10-07 11:57:38] 2025-10-07 09:56:36,772 | INFO     | mean x: 1759824667.0
[2025-10-07 11:57:38] 2025-10-07 09:56:36,772 | INFO     | mean y: 2482480.02955665
[2025-10-07 11:57:38] 2025-10-07 09:56:36,772 | INFO     | -- intersect: 7218544210.821358
[2025-10-07 11:57:38] 2025-10-07 09:56:36,772 | INFO     | intersect: 7218544210.821358
[2025-10-07 11:57:38] 2025-10-07 09:56:36,773 | INFO     | chi2: 0.9209335430049584
[2025-10-07 11:57:38] 2025-10-07 09:56:36,773 | INFO     | current chi2=0.9209335430049584 (change=49.78395857327166 %)
[2025-10-07 11:57:38] 2025-10-07 09:56:36,773 | INFO     | sum of square deviations: 2406926989.5
[2025-10-07 11:57:38] 2025-10-07 09:56:36,775 | INFO     | sum of deviations: -7421331492.000001
[2025-10-07 11:57:38] 2025-10-07 09:56:36,775 | INFO     | mean x: 1759824819.5
[2025-10-07 11:57:38] 2025-10-07 09:56:36,775 | INFO     | mean y: 2479813.585858586
[2025-10-07 11:57:38] 2025-10-07 09:56:36,775 | INFO     | -- intersect: 5428586799.935128
[2025-10-07 11:57:38] 2025-10-07 09:56:36,775 | INFO     | intersect: 5428586799.935128
[2025-10-07 11:57:38] 2025-10-07 09:56:36,788 | INFO     | chi2: 0.8967699087031543
[2025-10-07 11:57:38] 2025-10-07 09:56:36,788 | INFO     | current chi2=0.8967699087031543 (change=2.6238195454320667 %)
[2025-10-07 11:57:38] 2025-10-07 09:56:36,788 | INFO     | left removable region: 30
[2025-10-07 11:57:38] 2025-10-07 09:56:36,789 | INFO     | sum of square deviations: 1719429448.0
[2025-10-07 11:57:38] 2025-10-07 09:56:36,790 | INFO     | sum of deviations: 5441923155.0
[2025-10-07 11:57:38] 2025-10-07 09:56:36,790 | INFO     | mean x: 1759825094.0
[2025-10-07 11:57:38] 2025-10-07 09:56:36,791 | INFO     | mean y: 2491618.706214689
[2025-10-07 11:57:38] 2025-10-07 09:56:36,791 | INFO     | -- intersect: -5567282086.709962
[2025-10-07 11:57:38] 2025-10-07 09:56:36,791 | INFO     | intersect: -5567282086.709962
[2025-10-07 11:57:38] 2025-10-07 09:56:36,791 | INFO     | chi2: 0.0006035564156017694
[2025-10-07 11:57:38] 2025-10-07 09:56:36,791 | INFO     | -- intersect: -5567282086.709962
[2025-10-07 11:57:38] 2025-10-07 09:56:36,791 | INFO     | current memory leak: 3.16 B/s (using 177 data points, chi2=0.00)
[2025-10-07 11:57:38] 2025-10-07 09:56:36,792 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-10-07 11:57:38] 2025-10-07 09:56:36,792 | INFO     | ..............................
[2025-10-07 11:57:38] 2025-10-07 09:56:36,792 | INFO     | . Timing measurements:
[2025-10-07 11:57:38] 2025-10-07 09:56:36,793 | INFO     | . get job = 0 s
[2025-10-07 11:57:38] 2025-10-07 09:56:36,793 | INFO     | . initial setup = 13 s
[2025-10-07 11:57:38] 2025-10-07 09:56:36,793 | INFO     | . payload setup = 123 s
[2025-10-07 11:57:38] 2025-10-07 09:56:36,793 | INFO     | . stage-in = 0 s
[2025-10-07 11:57:38] 2025-10-07 09:56:36,793 | INFO     | . payload execution = 13155 s
[2025-10-07 11:57:38] 2025-10-07 09:56:36,793 | INFO     | . stage-out = 4 s
[2025-10-07 11:57:38] 2025-10-07 09:56:36,793 | INFO     | . log creation = 1 s
[2025-10-07 11:57:38] 2025-10-07 09:56:36,793 | INFO     | ..............................
[2025-10-07 11:57:38] 2025-10-07 09:56:37,175 | INFO     | time since job start (13591s) is within the limit (172800.0s)
[2025-10-07 11:57:38] 2025-10-07 09:56:37,402 | INFO     | 
[2025-10-07 11:57:38] 2025-10-07 09:56:37,402 | INFO     | job summary report
[2025-10-07 11:57:38] 2025-10-07 09:56:37,402 | INFO     | --------------------------------------------------
[2025-10-07 11:57:38] 2025-10-07 09:56:37,402 | INFO     | PanDA job id: 6831456215
[2025-10-07 11:57:38] 2025-10-07 09:56:37,402 | INFO     | task id: 46376905
[2025-10-07 11:57:38] 2025-10-07 09:56:37,402 | INFO     | errors: (none)
[2025-10-07 11:57:38] 2025-10-07 09:56:37,402 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 11:57:38] 2025-10-07 09:56:37,403 | INFO     | pilot state: finished 
[2025-10-07 11:57:38] 2025-10-07 09:56:37,403 | INFO     | transexitcode: 0
[2025-10-07 11:57:38] 2025-10-07 09:56:37,403 | INFO     | exeerrorcode: 0
[2025-10-07 11:57:38] 2025-10-07 09:56:37,403 | INFO     | exeerrordiag: 
[2025-10-07 11:57:38] 2025-10-07 09:56:37,403 | INFO     | exitcode: 0
[2025-10-07 11:57:38] 2025-10-07 09:56:37,403 | INFO     | exitmsg: OK
[2025-10-07 11:57:38] 2025-10-07 09:56:37,403 | INFO     | cpuconsumptiontime: 49179 s
[2025-10-07 11:57:38] 2025-10-07 09:56:37,403 | INFO     | nevents: 400
[2025-10-07 11:57:38] 2025-10-07 09:56:37,403 | INFO     | neventsw: 0
[2025-10-07 11:57:38] 2025-10-07 09:56:37,404 | INFO     | pid: 19177
[2025-10-07 11:57:38] 2025-10-07 09:56:37,404 | INFO     | pgrp: 19177
[2025-10-07 11:57:38] 2025-10-07 09:56:37,404 | INFO     | corecount: 8
[2025-10-07 11:57:38] 2025-10-07 09:56:37,404 | INFO     | event service: False
[2025-10-07 11:57:38] 2025-10-07 09:56:37,404 | INFO     | sizes: {0: 2348589, 1: 2348673, 2: 2348872, 12: 2348872, 23: 2348900, 34: 2348928, 45: 2349084, 55: 2349112, 66: 2349140, 77: 2349168, 88: 2349224, 98: 2349532, 99
[2025-10-07 11:57:38] 2025-10-07 09:56:37,404 | INFO     | --------------------------------------------------
[2025-10-07 11:57:38] 2025-10-07 09:56:37,404 | INFO     | 
[2025-10-07 11:57:38] 2025-10-07 09:56:37,405 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-10-07 11:57:38] 2025-10-07 09:56:37,600 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 11:57:38] 2025-10-07 09:56:37,600 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 11:57:38] 2025-10-07 09:56:37,601 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 11:57:38] 2025-10-07 09:56:37,601 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 11:57:38] 2025-10-07 09:56:37,601 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 11:57:38] 2025-10-07 09:56:37,601 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 11:57:38] 2025-10-07 09:56:37,601 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 11:57:38] 2025-10-07 09:56:37,601 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 11:57:38] 2025-10-07 09:56:37,601 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 11:57:38] 2025-10-07 09:56:37,601 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 11:57:38] 2025-10-07 09:56:37,602 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 11:57:38] 2025-10-07 09:56:37,602 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 11:57:38] 2025-10-07 09:56:37,602 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 11:57:38] 2025-10-07 09:56:37,602 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 11:57:38] 2025-10-07 09:56:37,602 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 11:57:38] 2025-10-07 09:56:37,602 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 11:57:38] 2025-10-07 09:56:37,602 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 11:57:38] 2025-10-07 09:56:37,602 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 11:57:38] 2025-10-07 09:56:37,602 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 11:57:38] 2025-10-07 09:56:37,603 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 11:57:38] 2025-10-07 09:56:37,603 | INFO     | job 6831456215 has completed (purged errors)
[2025-10-07 11:57:38] 2025-10-07 09:56:37,603 | INFO     | overall cleanup function is called
[2025-10-07 11:57:38] 2025-10-07 09:56:38,613 | INFO     | --- collectZombieJob: --- 10, [19177]
[2025-10-07 11:57:38] 2025-10-07 09:56:38,613 | INFO     | zombie collector waiting for pid 19177
[2025-10-07 11:57:38] 2025-10-07 09:56:38,613 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 11:57:38] 2025-10-07 09:56:38,613 | INFO     | collected zombie processes
[2025-10-07 11:57:38] 2025-10-07 09:56:38,613 | INFO     | will attempt to kill all subprocesses of pid=19177
[2025-10-07 11:57:38] 2025-10-07 09:56:38,740 | INFO     | process IDs to be killed: [19177] (in reverse order)
[2025-10-07 11:57:38] 2025-10-07 09:56:38,893 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 11:57:38] 2025-10-07 09:56:38,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 11:57:38] 2025-10-07 09:56:38,897 | INFO     | did not find any defunct processes belonging to 19177
[2025-10-07 11:57:38] 2025-10-07 09:56:38,900 | INFO     | did not find any defunct processes belonging to 19177
[2025-10-07 11:57:38] 2025-10-07 09:56:38,907 | INFO     | ready for new job
[2025-10-07 11:57:38] 2025-10-07 09:56:38,907 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 11:57:38] 2025-10-07 09:56:38,909 | INFO     | ***************************************
[2025-10-07 11:57:38] 2025-10-07 09:56:38,909 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 11:57:38] 2025-10-07 09:56:38,910 | INFO     | ***************************************
[2025-10-07 11:57:38] 2025-10-07 09:56:38,910 | INFO     | 
[2025-10-07 11:57:38] 2025-10-07 09:56:38,910 | INFO     | pilot is running in a VM
[2025-10-07 11:57:38] 2025-10-07 09:56:38,910 | INFO     | architecture information:
[2025-10-07 11:57:38] 2025-10-07 09:56:38,916 | INFO     | executing command: cat /etc/os-release
[2025-10-07 11:57:38] 2025-10-07 09:56:39,060 | INFO     | cat /etc/os-release:
[2025-10-07 11:57:38] NAME="CentOS Linux"
[2025-10-07 11:57:38] VERSION="7 (Core)"
[2025-10-07 11:57:38] ID="centos"
[2025-10-07 11:57:38] ID_LIKE="rhel fedora"
[2025-10-07 11:57:38] VERSION_ID="7"
[2025-10-07 11:57:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 11:57:38] ANSI_COLOR="0;31"
[2025-10-07 11:57:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 11:57:38] HOME_URL="https://www.centos.org/"
[2025-10-07 11:57:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 11:57:38] 
[2025-10-07 11:57:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 11:57:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 11:57:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 11:57:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 11:57:38] 
[2025-10-07 11:57:38] 2025-10-07 09:56:39,060 | INFO     | ***************************************
[2025-10-07 11:57:38] 2025-10-07 09:56:39,563 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-10-07 11:57:38] 2025-10-07 09:56:39,857 | INFO     | sufficient remaining disk space (496340303872 B)
[2025-10-07 11:57:38] 2025-10-07 09:56:39,858 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 11:57:38] 2025-10-07 09:56:39,858 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 11:57:38] 2025-10-07 09:56:39,858 | INFO     | update_server=False
[2025-10-07 11:57:38] 2025-10-07 09:56:39,858 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 11:57:38] 2025-10-07 09:56:39,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 11:57:38] 2025-10-07 09:56:39,859 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 11:57:38] 2025-10-07 09:56:39,859 | INFO     | aborting loop
[2025-10-07 11:57:38] 2025-10-07 09:56:39,875 | INFO     | all data control threads have been joined
[2025-10-07 11:57:38] 2025-10-07 09:56:40,101 | INFO     | all payload control threads have been joined
[2025-10-07 11:57:38] 2025-10-07 09:56:40,330 | INFO     | all job control threads have been joined
[2025-10-07 11:57:38] 2025-10-07 09:56:40,864 | INFO     | [job] retrieve thread has finished
[2025-10-07 11:57:38] 2025-10-07 09:56:40,865 | INFO     | [job] job monitor thread has finished
[2025-10-07 11:57:38] 2025-10-07 09:56:40,881 | INFO     | [data] control thread has finished
[2025-10-07 11:57:38] 2025-10-07 09:56:40,955 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 11:57:38] 2025-10-07 09:56:40,970 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 11:57:38] 2025-10-07 09:56:41,107 | INFO     | [payload] control thread has finished
[2025-10-07 11:57:38] 2025-10-07 09:56:41,114 | INFO     | [payload] failed_post thread has finished
[2025-10-07 11:57:38] 2025-10-07 09:56:41,239 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 11:57:38] 2025-10-07 09:56:41,309 | INFO     | [data] copytool_in thread has finished
[2025-10-07 11:57:38] 2025-10-07 09:56:41,337 | INFO     | [job] control thread has finished
[2025-10-07 11:57:38] 2025-10-07 09:56:41,411 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 11:57:38] 2025-10-07 09:56:41,874 | INFO     | [job] validate thread has finished
[2025-10-07 11:57:38] 2025-10-07 09:56:41,977 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 11:57:38] 2025-10-07 09:56:42,242 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 11:57:38] 2025-10-07 09:56:42,248 | INFO     | [payload] validate_post thread has finished
[2025-10-07 11:57:38] 2025-10-07 09:56:42,983 | INFO     | [job] queue monitor thread has finished
[2025-10-07 11:57:38] 2025-10-07 09:56:43,247 | INFO     | [data] copytool_out thread has finished
[2025-10-07 11:57:38] 2025-10-07 09:56:43,868 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 11:57:38] 2025-10-07 09:57:10,341 | INFO     | PID=12568 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 11:57:38] 2025-10-07 09:57:10,342 | INFO     | .. there are 9 such processes running
[2025-10-07 11:57:38] 2025-10-07 09:57:10,342 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 11:57:38] 2025-10-07 09:57:10,342 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 11:57:38] 2025-10-07 09:57:10,342 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 11:57:38] 2025-10-07 09:57:29,034 | INFO     | [monitor] cgroup control has ended
[2025-10-07 11:57:38] 2025-10-07 09:57:30,458 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140333007845184)>', '<ExcThread(monitor, started 140332285032192)>']
[2025-10-07 11:57:38] 2025-10-07 09:57:30,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 11:57:38] 2025-10-07 09:57:30,461 | INFO     | [monitor] control thread has ended
[2025-10-07 11:57:38] 2025-10-07 09:57:35,484 | INFO     | all workflow threads have been joined
[2025-10-07 11:57:38] 2025-10-07 09:57:35,484 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 11:57:38] 2025-10-07 09:57:35,484 | INFO     | traces error code: 0
[2025-10-07 11:57:38] 2025-10-07 09:57:35,484 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 11:57:38] 2025-10-07 09:57:35,803 [wrapper] ==== pilot stdout END ====
[2025-10-07 11:57:38] 2025-10-07 09:57:35,816 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 11:57:38] 2025-10-07 09:57:35,826 [wrapper] pilotpid: 12568
[2025-10-07 11:57:38] 2025-10-07 09:57:35,836 [wrapper] Pilot exit status: 0
[2025-10-07 11:57:38] 2025-10-07 09:57:36,111 [wrapper] pandaids: 6831456215
[2025-10-07 11:57:38] 2025-10-07 09:57:36,259 [wrapper] cleanup supervisor_pilot 10620 12569
[2025-10-07 11:57:38] 2025-10-07 09:57:36,363 [wrapper] Test setup, not cleaning
[2025-10-07 11:57:38] 2025-10-07 09:57:36,466 [wrapper] apfmon messages muted
[2025-10-07 11:57:38] 2025-10-07 09:57:36,554 [wrapper] ==== wrapper stdout END ====
[2025-10-07 11:57:38] 2025-10-07 09:57:36,659 [wrapper] ==== wrapper stderr END ====
[2025-10-07 11:57:38]  *** Error codes and diagnostics ***
[2025-10-07 11:57:38]     "exeErrorCode": 0,
[2025-10-07 11:57:38]     "exeErrorDiag": "",
[2025-10-07 11:57:38]     "pilotErrorCode": 0,
[2025-10-07 11:57:38]     "pilotErrorDiag": "",
[2025-10-07 11:57:38]  *** Listing of results directory ***
[2025-10-07 11:57:38] total 398512
[2025-10-07 11:57:38] -rw-r--r--. 1 boinc boinc    552446 Oct  5 14:41 pilot3.tar.gz
[2025-10-07 11:57:38] -rwx------. 1 boinc boinc     36292 Oct  5 14:49 runpilot2-wrapper.sh
[2025-10-07 11:57:38] -rw-r--r--. 1 boinc boinc      5112 Oct  5 14:49 queuedata.json
[2025-10-07 11:57:38] -rw-r--r--. 1 boinc boinc       100 Oct  7 08:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 11:57:38] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 08:06 run_atlas
[2025-10-07 11:57:38] -rw-r--r--. 1 boinc boinc       105 Oct  7 08:06 job.xml
[2025-10-07 11:57:38] -rw-r--r--. 2 boinc boinc 216788868 Oct  7 08:06 EVNT.46376901._003104.pool.root.1
[2025-10-07 11:57:38] -rw-r--r--. 1 boinc boinc      6389 Oct  7 08:06 init_data.xml
[2025-10-07 11:57:38] -rw-r--r--. 2 boinc boinc     15120 Oct  7 08:06 start_atlas.sh
[2025-10-07 11:57:38] drwxrwx--x. 2 boinc boinc        68 Oct  7 08:06 shared
[2025-10-07 11:57:38] -rw-r--r--. 2 boinc boinc    565602 Oct  7 08:06 input.tar.gz
[2025-10-07 11:57:38] -rw-r--r--. 1 boinc boinc         0 Oct  7 08:06 boinc_lockfile
[2025-10-07 11:57:38] -rw-r--r--. 1 boinc boinc      2519 Oct  7 08:06 pandaJob.out
[2025-10-07 11:57:38] -rw-------. 1 boinc boinc    974984 Oct  7 08:09 agis_schedconf.cvmfs.json
[2025-10-07 11:57:38] drwx------. 4 boinc boinc      4096 Oct  7 08:10 pilot3
[2025-10-07 11:57:38] -rw-------. 1 boinc boinc 182913092 Oct  7 11:53 HITS.46376905._084555.pool.root.1
[2025-10-07 11:57:38] -rw-r--r--. 1 boinc boinc       531 Oct  7 11:54 boinc_task_state.xml
[2025-10-07 11:57:38] -rw-------. 1 boinc boinc      1012 Oct  7 11:54 memory_monitor_summary.json
[2025-10-07 11:57:38] -rw-------. 1 boinc boinc   1560401 Oct  7 11:54 agis_ddmendpoints.agis.ALL.json
[2025-10-07 11:57:38] -rw-------. 1 boinc boinc    433703 Oct  7 11:54 log.46376905._084555.job.log.tgz.1
[2025-10-07 11:57:38] -rw-------. 1 boinc boinc        95 Oct  7 11:56 pilot_heartbeat.json
[2025-10-07 11:57:38] -rw-------. 1 boinc boinc      7788 Oct  7 11:56 heartbeat.json
[2025-10-07 11:57:38] -rw-r--r--. 1 boinc boinc      8192 Oct  7 11:57 boinc_mmap_file
[2025-10-07 11:57:38] -rw-r--r--. 1 boinc boinc        28 Oct  7 11:57 wrapper_checkpoint.txt
[2025-10-07 11:57:38] -rw-------. 1 boinc boinc      4884 Oct  7 11:57 pilotlog.txt
[2025-10-07 11:57:38] -rw-------. 1 boinc boinc   1816290 Oct  7 11:57 log.46376905._084555.job.log.1
[2025-10-07 11:57:38] -rw-------. 1 boinc boinc       357 Oct  7 11:57 output.list
[2025-10-07 11:57:38] -rw-r--r--. 1 boinc boinc       620 Oct  7 11:57 runtime_log
[2025-10-07 11:57:38] -rw-------. 1 boinc boinc   2273280 Oct  7 11:57 result.tar.gz
[2025-10-07 11:57:38] -rw-r--r--. 1 boinc boinc      8703 Oct  7 11:57 runtime_log.err
[2025-10-07 11:57:38] -rw-------. 1 boinc boinc       656 Oct  7 11:57 NgjKDmWMdP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmiHGMDmBEc3Mm.diag
[2025-10-07 11:57:38] -rw-r--r--. 1 boinc boinc     20615 Oct  7 11:57 stderr.txt
[2025-10-07 11:57:38] HITS file was successfully produced:
[2025-10-07 11:57:39] -rw-------. 1 boinc boinc 182913092 Oct  7 11:53 shared/HITS.pool.root.1
[2025-10-07 11:57:39]  *** Contents of shared directory: ***
[2025-10-07 11:57:39] total 393128
[2025-10-07 11:57:39] -rw-r--r--. 2 boinc boinc 216788868 Oct  7 08:06 ATLAS.root_0
[2025-10-07 11:57:39] -rw-r--r--. 2 boinc boinc     15120 Oct  7 08:06 start_atlas.sh
[2025-10-07 11:57:39] -rw-r--r--. 2 boinc boinc    565602 Oct  7 08:06 input.tar.gz
[2025-10-07 11:57:39] -rw-------. 1 boinc boinc 182913092 Oct  7 11:53 HITS.pool.root.1
[2025-10-07 11:57:39] -rw-------. 1 boinc boinc   2273280 Oct  7 11:57 result.tar.gz
11:57:40 (8794): run_atlas exited; CPU time 49362.262697
11:57:40 (8794): called boinc_finish(0)

</stderr_txt>
]]>

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