Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:44:14 (2918762): wrapper (7.7.26015): starting
09:44:14 (2918762): wrapper: running run_atlas (--nthreads 12)
[2025-10-05 09:44:14] Arguments: --nthreads 12
[2025-10-05 09:44:14] Threads: 12
[2025-10-05 09:44:14] Checking for CVMFS
[2025-10-05 09:44:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-05 09:44:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-05 09:44:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-05 09:44:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-05 09:44:14] 2.11.5.0 2129 22353 206896 151369 0 210 42752186 45568001 16491 130560 0 211023347 99.826 107763630 26173 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-05 09:44:14] CVMFS is ok
[2025-10-05 09:44:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-05 09:44:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-05 09:44:14] Further information can be found at the LHC@home message board.
[2025-10-05 09:44:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-05 09:44:14] Checking for apptainer binary...
[2025-10-05 09:44:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-05 09:44:14] Running /usr/bin/apptainer --version
[2025-10-05 09:44:14] apptainer version 1.4.1-1.el9
[2025-10-05 09:44:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-05 09:44:15] wns0037.triumf.lcg
[2025-10-05 09:44:15] apptainer works
[2025-10-05 09:44:15] Set ATHENA_PROC_NUMBER=12
[2025-10-05 09:44:15] Set ATHENA_CORE_NUMBER=12
[2025-10-05 09:44:15] Starting ATLAS job with PandaID=6831735061
[2025-10-05 09:44:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-05 09:49:15]  *** The last 200 lines of the pilot log: ***
[2025-10-05 09:49:15] 2025-10-05 16:48:39,934 | WARNING  | wrong length of table data, x=[1759682757.0], y=[1847.0] (must be same and length>=4)
[2025-10-05 09:49:15] 2025-10-05 16:48:39,934 | INFO     | could have reported an average CPU frequency of 2714 MHz (4 samples)
[2025-10-05 09:49:15] 2025-10-05 16:48:39,934 | INFO     | ..............................
[2025-10-05 09:49:15] 2025-10-05 16:48:39,934 | INFO     | . Timing measurements:
[2025-10-05 09:49:15] 2025-10-05 16:48:39,934 | INFO     | . get job = 0 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,934 | INFO     | . initial setup = 3 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | . payload setup = 13 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | . stage-in = 0 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | . payload execution = 43 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | . stage-out = 0 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | . log creation = 0 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | ..............................
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6831735061/pilotlog.txt
[2025-10-05 09:49:15] 2025-10-05 16:48:40,070 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-05 09:49:15] - Log from pilotlog.txt -
[2025-10-05 09:49:15] 2025-10-05 16:48:39,883 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6831735061/memory_monitor_summary.json (trf name=prmon)
[2025-10-05 09:49:15] 2025-10-05 16:48:39,911 | INFO     | extracted standard info from prmon json
[2025-10-05 09:49:15] 2025-10-05 16:48:39,933 | INFO     | extracted standard memory fields from prmon json
[2025-10-05 09:49:15] 2025-10-05 16:48:39,933 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-05 09:49:15] 2025-10-05 16:48:39,933 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 09:49:15] 2025-10-05 16:48:39,933 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 09:49:15] 2025-10-05 16:48:39,934 | WARNING  | wrong length of table data, x=[1759682757.0], y=[1847.0] (must be same and length>=4)
[2025-10-05 09:49:15] 2025-10-05 16:48:39,934 | INFO     | could have reported an average CPU frequency of 2714 MHz (4 samples)
[2025-10-05 09:49:15] 2025-10-05 16:48:39,934 | INFO     | ..............................
[2025-10-05 09:49:15] 2025-10-05 16:48:39,934 | INFO     | . Timing measurements:
[2025-10-05 09:49:15] 2025-10-05 16:48:39,934 | INFO     | . get job = 0 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,934 | INFO     | . initial setup = 3 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | . payload setup = 13 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | . stage-in = 0 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | . payload execution = 43 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | . stage-out = 0 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | . log creation = 0 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | ..............................
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6831735061/pilotlog.txt
[2025-10-05 09:49:15] 2025-10-05 16:48:40,070 | WARNING  | 
[2025-10-05 09:49:15] [begin log extracts]
[2025-10-05 09:49:15] - Log from pilotlog.txt -
[2025-10-05 09:49:15] 2025-10-05 16:48:39,883 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6831735061/memory_monitor_summary.json (trf name=prmon)
[2025-10-05 09:49:15] 2025-10-05 16:48:39,911 | INFO     | extracted standard info from prmon json
[2025-10-05 09:49:15] 2025-10-05 16:48:39,933 | INFO     | extracted standard memory fields from prmon json
[2025-10-05 09:49:15] 2025-10-05 16:48:39,933 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-05 09:49:15] 2025-10-05 16:48:39,933 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 09:49:15] 2025-10-05 16:48:39,933 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 09:49:15] 2025-10-05 16:48:39,934 | WARNING  | wrong length of table data, x=[1759682757.0], y=[1847.0] (must be same and length>=4)
[2025-10-05 09:49:15] 2025-10-05 16:48:39,934 | INFO     | could have reported an average CPU frequency of 2714 MHz (4 samples)
[2025-10-05 09:49:15] 2025-10-05 16:48:39,934 | INFO     | ..............................
[2025-10-05 09:49:15] 2025-10-05 16:48:39,934 | INFO     | . Timing measurements:
[2025-10-05 09:49:15] 2025-10-05 16:48:39,934 | INFO     | . get job = 0 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,934 | INFO     | . initial setup = 3 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | . payload setup = 13 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | . stage-in = 0 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | . payload execution = 43 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | . stage-out = 0 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | . log creation = 0 s
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | ..............................
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-05 09:49:15] 2025-10-05 16:48:39,935 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6831735061/pilotlog.txt
[2025-10-05 09:49:15] [end log extracts]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,071 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-05 09:49:15] 2025-10-05 16:48:40,071 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-05 09:49:15] 2025-10-05 16:48:40,710 | INFO     | time since job start (235s) is within the limit (172800.0s)
[2025-10-05 09:49:15] 2025-10-05 16:48:40,942 | INFO     | 
[2025-10-05 09:49:15] 2025-10-05 16:48:40,942 | INFO     | job summary report
[2025-10-05 09:49:15] 2025-10-05 16:48:40,942 | INFO     | --------------------------------------------------
[2025-10-05 09:49:15] 2025-10-05 16:48:40,942 | INFO     | PanDA job id: 6831735061
[2025-10-05 09:49:15] 2025-10-05 16:48:40,942 | INFO     | task id: 46376905
[2025-10-05 09:49:15] 2025-10-05 16:48:40,942 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-05 09:46:16,339 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-05 09:49:15] 2025-10-05 16:48:40,942 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-05 09:49:15] 2025-10-05 16:48:40,942 | INFO     | pilot state: failed 
[2025-10-05 09:49:15] 2025-10-05 16:48:40,943 | INFO     | transexitcode: 65
[2025-10-05 09:49:15] 2025-10-05 16:48:40,943 | INFO     | exeerrorcode: 65
[2025-10-05 09:49:15] 2025-10-05 16:48:40,943 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-05 09:49:15] 2025-10-05 16:48:40,943 | INFO     | exitcode: 65
[2025-10-05 09:49:15] 2025-10-05 16:48:40,943 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-05 09:49:15] 2025-10-05 16:48:40,943 | INFO     | cpuconsumptiontime: 16 s
[2025-10-05 09:49:15] 2025-10-05 16:48:40,943 | INFO     | nevents: 0
[2025-10-05 09:49:15] 2025-10-05 16:48:40,943 | INFO     | neventsw: 0
[2025-10-05 09:49:15] 2025-10-05 16:48:40,943 | INFO     | pid: 2929139
[2025-10-05 09:49:15] 2025-10-05 16:48:40,943 | INFO     | pgrp: 2929139
[2025-10-05 09:49:15] 2025-10-05 16:48:40,943 | INFO     | corecount: 12
[2025-10-05 09:49:15] 2025-10-05 16:48:40,943 | INFO     | event service: False
[2025-10-05 09:49:15] 2025-10-05 16:48:40,943 | INFO     | sizes: {0: 2348586, 1: 2348841, 2: 2348841, 13: 2348869, 19: 2349187, 23: 2349215, 61: 2372544, 62: 2376836, 63: 2376864, 196: 2377030}
[2025-10-05 09:49:15] 2025-10-05 16:48:40,943 | INFO     | --------------------------------------------------
[2025-10-05 09:49:15] 2025-10-05 16:48:40,943 | INFO     | 
[2025-10-05 09:49:15] 2025-10-05 16:48:40,943 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-05 09:49:15] 2025-10-05 16:48:40,996 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,996 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,996 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,996 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,997 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,997 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,997 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,997 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,997 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,997 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,997 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,997 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,997 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,997 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-05 09:49:15] 2025-10-05 16:48:40,997 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,997 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-05 09:49:15] 2025-10-05 16:48:40,997 | INFO     | job 6831735061 has completed (purged errors)
[2025-10-05 09:49:15] 2025-10-05 16:48:40,998 | INFO     | overall cleanup function is called
[2025-10-05 09:49:15] 2025-10-05 16:48:42,005 | INFO     | --- collectZombieJob: --- 10, [2929139]
[2025-10-05 09:49:15] 2025-10-05 16:48:42,005 | INFO     | zombie collector waiting for pid 2929139
[2025-10-05 09:49:15] 2025-10-05 16:48:42,005 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-05 09:49:15] 2025-10-05 16:48:42,005 | INFO     | collected zombie processes
[2025-10-05 09:49:15] 2025-10-05 16:48:42,005 | INFO     | will attempt to kill all subprocesses of pid=2929139
[2025-10-05 09:49:15] 2025-10-05 16:48:42,502 | INFO     | process IDs to be killed: [2929139] (in reverse order)
[2025-10-05 09:49:15] 2025-10-05 16:48:42,591 | WARNING  | found no corresponding commands to process id(s)
[2025-10-05 09:49:15] 2025-10-05 16:48:42,592 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-05 09:49:15] 2025-10-05 16:48:42,647 | INFO     | did not find any defunct processes belonging to 2929139
[2025-10-05 09:49:15] 2025-10-05 16:48:42,692 | INFO     | did not find any defunct processes belonging to 2929139
[2025-10-05 09:49:15] 2025-10-05 16:48:42,692 | INFO     | ready for new job
[2025-10-05 09:49:15] 2025-10-05 16:48:42,692 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-05 09:49:15] 2025-10-05 16:48:42,693 | INFO     | ***************************************
[2025-10-05 09:49:15] 2025-10-05 16:48:42,694 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-05 09:49:15] 2025-10-05 16:48:42,694 | INFO     | ***************************************
[2025-10-05 09:49:15] 2025-10-05 16:48:42,713 | INFO     | 
[2025-10-05 09:49:15] 2025-10-05 16:48:42,715 | INFO     | architecture information:
[2025-10-05 09:49:15] 2025-10-05 16:48:42,719 | INFO     | executing command: cat /etc/os-release
[2025-10-05 09:49:15] 2025-10-05 16:48:42,818 | INFO     | cat /etc/os-release:
[2025-10-05 09:49:15] NAME="CentOS Linux"
[2025-10-05 09:49:15] VERSION="7 (Core)"
[2025-10-05 09:49:15] ID="centos"
[2025-10-05 09:49:15] ID_LIKE="rhel fedora"
[2025-10-05 09:49:15] VERSION_ID="7"
[2025-10-05 09:49:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-05 09:49:15] ANSI_COLOR="0;31"
[2025-10-05 09:49:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-05 09:49:15] HOME_URL="https://www.centos.org/"
[2025-10-05 09:49:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-05 09:49:15] 
[2025-10-05 09:49:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-05 09:49:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-05 09:49:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-05 09:49:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-05 09:49:15] 
[2025-10-05 09:49:15] 2025-10-05 16:48:42,818 | INFO     | ***************************************
[2025-10-05 09:49:15] 2025-10-05 16:48:43,322 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-05 09:49:15] 2025-10-05 16:48:43,381 | INFO     | sufficient remaining disk space (2092722814976 B)
[2025-10-05 09:49:15] 2025-10-05 16:48:43,382 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-05 09:49:15] 2025-10-05 16:48:43,382 | INFO     | current server update state: UPDATING_FINAL
[2025-10-05 09:49:15] 2025-10-05 16:48:43,382 | INFO     | update_server=False
[2025-10-05 09:49:15] 2025-10-05 16:48:43,382 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-05 09:49:15] 2025-10-05 16:48:43,440 | INFO     | all payload control threads have been joined
[2025-10-05 09:49:15] 2025-10-05 16:48:43,738 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-05 09:49:15] 2025-10-05 16:48:43,738 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-05 09:49:15] 2025-10-05 16:48:43,738 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-05 09:49:15] 2025-10-05 16:48:43,738 | INFO     | will abort loop
[2025-10-05 09:49:15] 2025-10-05 16:48:43,756 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-05 09:49:15] 2025-10-05 16:48:43,900 | INFO     | all data control threads have been joined
[2025-10-05 09:49:15] 2025-10-05 16:48:44,304 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-05 09:49:15] 2025-10-05 16:48:44,388 | INFO     | [job] retrieve thread has finished
[2025-10-05 09:49:15] 2025-10-05 16:48:44,416 | INFO     | [payload] execute_payloads thread has finished
[2025-10-05 09:49:15] 2025-10-05 16:48:44,425 | INFO     | [payload] validate_pre thread has finished
[2025-10-05 09:49:15] 2025-10-05 16:48:44,446 | INFO     | [payload] control thread has finished
[2025-10-05 09:49:15] 2025-10-05 16:48:44,744 | INFO     | [job] job monitor thread has finished
[2025-10-05 09:49:15] 2025-10-05 16:48:44,749 | INFO     | all job control threads have been joined
[2025-10-05 09:49:15] 2025-10-05 16:48:44,906 | INFO     | [data] control thread has finished
[2025-10-05 09:49:15] 2025-10-05 16:48:44,971 | INFO     | [job] validate thread has finished
[2025-10-05 09:49:15] 2025-10-05 16:48:45,020 | INFO     | [data] copytool_in thread has finished
[2025-10-05 09:49:15] 2025-10-05 16:48:45,028 | INFO     | [monitor] cgroup control has ended
[2025-10-05 09:49:15] 2025-10-05 16:48:45,236 | INFO     | [job] create_data_payload thread has finished
[2025-10-05 09:49:15] 2025-10-05 16:48:45,265 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-05 09:49:15] 2025-10-05 16:48:45,513 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-05 09:49:15] 2025-10-05 16:48:45,755 | INFO     | [job] control thread has finished
[2025-10-05 09:49:15] 2025-10-05 16:48:45,769 | INFO     | [payload] failed_post thread has finished
[2025-10-05 09:49:15] 2025-10-05 16:48:45,876 | INFO     | [payload] validate_post thread has finished
[2025-10-05 09:49:15] 2025-10-05 16:48:46,311 | INFO     | [data] copytool_out thread has finished
[2025-10-05 09:49:15] 2025-10-05 16:48:46,519 | INFO     | [job] queue monitor thread has finished
[2025-10-05 09:49:15] 2025-10-05 16:48:47,767 | INFO     | [data] queue_monitor thread has finished
[2025-10-05 09:49:15] 2025-10-05 16:48:48,150 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139790298314560)>', '<ExcThread(monitor, started 139789592401664)>']
[2025-10-05 09:49:15] 2025-10-05 16:48:53,176 | INFO     | all workflow threads have been joined
[2025-10-05 09:49:15] 2025-10-05 16:48:53,176 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-05 09:49:15] 2025-10-05 16:48:53,176 | INFO     | traces error code: 0
[2025-10-05 09:49:15] 2025-10-05 16:48:53,177 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-05 09:49:15] 2025-10-05 16:49:14,244 | INFO     | PID=2922466 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-05 09:49:15] 2025-10-05 16:49:14,244 | INFO     | .. there are 28 such processes running
[2025-10-05 09:49:15] 2025-10-05 16:49:14,245 | INFO     | found 0 job(s) in 20 queues
[2025-10-05 09:49:15] 2025-10-05 16:49:14,245 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-05 09:49:15] 2025-10-05 16:49:14,245 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-05 09:49:15] 2025-10-05 16:49:14,245 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-05 09:49:15] 2025-10-05 16:49:14,245 | INFO     | [monitor] control thread has ended
[2025-10-05 09:49:15] 2025-10-05 16:49:14,505 [wrapper] ==== pilot stdout END ====
[2025-10-05 09:49:15] 2025-10-05 16:49:14,506 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-05 09:49:15] 2025-10-05 16:49:14,508 [wrapper] pilotpid: 2922466
[2025-10-05 09:49:15] 2025-10-05 16:49:14,509 [wrapper] Pilot exit status: 0
[2025-10-05 09:49:15] 2025-10-05 16:49:14,578 [wrapper] pandaids: 6831735061
[2025-10-05 09:49:15] 2025-10-05 16:49:14,952 [wrapper] cleanup supervisor_pilot 2922472 2922467
[2025-10-05 09:49:15] 2025-10-05 16:49:14,979 [wrapper] Test setup, not cleaning
[2025-10-05 09:49:15] 2025-10-05 16:49:15,013 [wrapper] apfmon messages muted
[2025-10-05 09:49:15] 2025-10-05 16:49:15,043 [wrapper] ==== wrapper stdout END ====
[2025-10-05 09:49:15] 2025-10-05 16:49:15,064 [wrapper] ==== wrapper stderr END ====
[2025-10-05 09:49:15]  *** Error codes and diagnostics ***
[2025-10-05 09:49:15]     "exeErrorCode": 65,
[2025-10-05 09:49:15]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-05 09:49:15]     "pilotErrorCode": 1305,
[2025-10-05 09:49:15]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-05 09:49:15]  *** Listing of results directory ***
[2025-10-05 09:49:15] total 215332
[2025-10-05 09:49:15] -rw-r--r--. 1 boinc boinc    552446 Oct  5 07:46 pilot3.tar.gz
[2025-10-05 09:49:15] -rw-r--r--. 1 boinc boinc      5112 Oct  5 07:58 queuedata.json
[2025-10-05 09:49:15] -rwx------. 1 boinc boinc     36292 Oct  5 07:59 runpilot2-wrapper.sh
[2025-10-05 09:49:15] -rw-r--r--. 1 boinc boinc       100 Oct  5 09:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-05 09:49:15] -rwxr-xr-x. 1 boinc boinc      7986 Oct  5 09:44 run_atlas
[2025-10-05 09:49:15] -rw-r--r--. 1 boinc boinc       105 Oct  5 09:44 job.xml
[2025-10-05 09:49:15] -rw-r--r--. 1 boinc boinc      6594 Oct  5 09:44 init_data.xml
[2025-10-05 09:49:15] -rw-r--r--. 2 boinc boinc 216395247 Oct  5 09:44 EVNT.46376901._003220.pool.root.1
[2025-10-05 09:49:15] -rw-r--r--. 2 boinc boinc     15120 Oct  5 09:44 start_atlas.sh
[2025-10-05 09:49:15] drwxrwx--x. 2 boinc boinc      4096 Oct  5 09:44 shared
[2025-10-05 09:49:15] -rw-r--r--. 2 boinc boinc    565603 Oct  5 09:44 input.tar.gz
[2025-10-05 09:49:15] -rw-r--r--. 1 boinc boinc         0 Oct  5 09:44 boinc_lockfile
[2025-10-05 09:49:15] -rw-r--r--. 1 boinc boinc      2519 Oct  5 09:44 pandaJob.out
[2025-10-05 09:49:15] -rw-------. 1 boinc boinc    974054 Oct  5 09:44 agis_schedconf.cvmfs.json
[2025-10-05 09:49:15] -rw-------. 1 boinc boinc   1560401 Oct  5 09:44 agis_ddmendpoints.agis.ALL.json
[2025-10-05 09:49:15] drwx------. 4 boinc boinc      4096 Oct  5 09:44 pilot3
[2025-10-05 09:49:15] -rw-------. 1 boinc boinc       945 Oct  5 09:46 memory_monitor_summary.json
[2025-10-05 09:49:15] -rw-------. 1 boinc boinc     21888 Oct  5 09:46 log.46376905._087627.job.log.tgz.1
[2025-10-05 09:49:15] -rw-------. 1 boinc boinc      8389 Oct  5 09:48 heartbeat.json
[2025-10-05 09:49:15] -rw-r--r--. 1 boinc boinc       523 Oct  5 09:48 boinc_task_state.xml
[2025-10-05 09:49:15] -rw-r--r--. 1 boinc boinc      8192 Oct  5 09:49 boinc_mmap_file
[2025-10-05 09:49:15] -rw-------. 1 boinc boinc        95 Oct  5 09:49 pilot_heartbeat.json
[2025-10-05 09:49:15] -rw-------. 1 boinc boinc       823 Oct  5 09:49 pilotlog.txt
[2025-10-05 09:49:15] -rw-r--r--. 1 boinc boinc        22 Oct  5 09:49 wrapper_checkpoint.txt
[2025-10-05 09:49:15] -rw-------. 1 boinc boinc     91319 Oct  5 09:49 log.46376905._087627.job.log.1
[2025-10-05 09:49:15] -rw-------. 1 boinc boinc       188 Oct  5 09:49 output.list
[2025-10-05 09:49:15] -rw-r--r--. 1 boinc boinc       620 Oct  5 09:49 runtime_log
[2025-10-05 09:49:15] -rw-------. 1 boinc boinc    133120 Oct  5 09:49 result.tar.gz
[2025-10-05 09:49:15] -rw-r--r--. 1 boinc boinc      8528 Oct  5 09:49 runtime_log.err
[2025-10-05 09:49:15] -rw-------. 1 boinc boinc       643 Oct  5 09:49 gumNDmdNfP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmFbGMDmJIwS3m.diag
[2025-10-05 09:49:15] -rw-r--r--. 1 boinc boinc     21863 Oct  5 09:49 stderr.txt
[2025-10-05 09:49:15] No HITS result produced
[2025-10-05 09:49:15]  *** Contents of shared directory: ***
[2025-10-05 09:49:15] total 212028
[2025-10-05 09:49:15] -rw-r--r--. 2 boinc boinc 216395247 Oct  5 09:44 ATLAS.root_0
[2025-10-05 09:49:15] -rw-r--r--. 2 boinc boinc     15120 Oct  5 09:44 start_atlas.sh
[2025-10-05 09:49:15] -rw-r--r--. 2 boinc boinc    565603 Oct  5 09:44 input.tar.gz
[2025-10-05 09:49:15] -rw-------. 1 boinc boinc    133120 Oct  5 09:49 result.tar.gz
09:49:16 (2918762): run_atlas exited; CPU time 26.084549
09:49:16 (2918762): called boinc_finish(0)

</stderr_txt>
]]>

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