Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:46:40 (25023): wrapper (7.7.26015): starting
16:46:40 (25023): wrapper: running run_atlas (--nthreads 8)
[2025-10-06 16:46:40] Arguments: --nthreads 8
[2025-10-06 16:46:40] Threads: 8
[2025-10-06 16:46:40] Checking for CVMFS
[2025-10-06 16:46:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 16:46:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 16:46:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 16:46:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 16:46:42] 2.11.2.0 20802 12236 78956 151401 2 60 18688647 25165825 4632 130560 0 3643606 99.811 1761332 1119 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-06 16:46:42] CVMFS is ok
[2025-10-06 16:46:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 16:46:43] Checking for apptainer binary...
[2025-10-06 16:46:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 16:46:43] Running /usr/bin/apptainer --version
[2025-10-06 16:46:43] apptainer version 1.3.2-1.el7
[2025-10-06 16:46:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 16:47:08] cg-vwn369.simple-grid.lan
[2025-10-06 16:47:08] apptainer works
[2025-10-06 16:47:08] Set ATHENA_PROC_NUMBER=8
[2025-10-06 16:47:08] Set ATHENA_CORE_NUMBER=8
[2025-10-06 16:47:08] Starting ATLAS job with PandaID=6831535199
[2025-10-06 16:47:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 20:55:16]  *** The last 200 lines of the pilot log: ***
[2025-10-06 20:55:16] 2025-10-06 18:54:41,003 | INFO     | sum of square deviations: 3871990738.0
[2025-10-06 20:55:16] 2025-10-06 18:54:41,005 | INFO     | sum of deviations: 123199961195.0
[2025-10-06 20:55:16] 2025-10-06 18:54:41,005 | INFO     | mean x: 1759769704.5
[2025-10-06 20:55:16] 2025-10-06 18:54:41,005 | INFO     | mean y: 2394353.474137931
[2025-10-06 20:55:16] 2025-10-06 18:54:41,005 | INFO     | -- intersect: -55990394363.402336
[2025-10-06 20:55:16] 2025-10-06 18:54:41,005 | INFO     | intersect: -55990394363.402336
[2025-10-06 20:55:16] 2025-10-06 18:54:41,006 | INFO     | chi2: 7.294670787053352
[2025-10-06 20:55:16] 2025-10-06 18:54:41,006 | INFO     | sum of square deviations: 3627000098.0
[2025-10-06 20:55:16] 2025-10-06 18:54:41,008 | INFO     | sum of deviations: 135606984032.0
[2025-10-06 20:55:16] 2025-10-06 18:54:41,008 | INFO     | mean x: 1759769552.0
[2025-10-06 20:55:16] 2025-10-06 18:54:41,008 | INFO     | mean y: 2401907.8678414095
[2025-10-06 20:55:16] 2025-10-06 18:54:41,008 | INFO     | -- intersect: -65792203851.766136
[2025-10-06 20:55:16] 2025-10-06 18:54:41,008 | INFO     | intersect: -65792203851.766136
[2025-10-06 20:55:16] 2025-10-06 18:54:41,009 | INFO     | chi2: 6.55668113657801
[2025-10-06 20:55:16] 2025-10-06 18:54:41,009 | INFO     | current chi2=6.55668113657801 (change=10.116832849881758 %)
[2025-10-06 20:55:16] 2025-10-06 18:54:41,009 | INFO     | right removable region: 226
[2025-10-06 20:55:16] 2025-10-06 18:54:41,009 | INFO     | sum of square deviations: 3627000098.0
[2025-10-06 20:55:16] 2025-10-06 18:54:41,011 | INFO     | sum of deviations: 45493933956.00001
[2025-10-06 20:55:16] 2025-10-06 18:54:41,012 | INFO     | mean x: 1759769857.0
[2025-10-06 20:55:16] 2025-10-06 18:54:41,012 | INFO     | mean y: 2442682.202643172
[2025-10-06 20:55:16] 2025-10-06 18:54:41,012 | INFO     | -- intersect: -22070579509.40513
[2025-10-06 20:55:16] 2025-10-06 18:54:41,012 | INFO     | intersect: -22070579509.40513
[2025-10-06 20:55:16] 2025-10-06 18:54:41,012 | INFO     | chi2: 2.6163164680156026
[2025-10-06 20:55:16] 2025-10-06 18:54:41,012 | INFO     | current chi2=2.6163164680156026 (change=64.13386505859778 %)
[2025-10-06 20:55:16] 2025-10-06 18:54:41,013 | INFO     | sum of square deviations: 3392567795.5
[2025-10-06 20:55:16] 2025-10-06 18:54:41,015 | INFO     | sum of deviations: -1559655289.4999866
[2025-10-06 20:55:16] 2025-10-06 18:54:41,015 | INFO     | mean x: 1759770009.5
[2025-10-06 20:55:16] 2025-10-06 18:54:41,015 | INFO     | mean y: 2473160.7882882883
[2025-10-06 20:55:16] 2025-10-06 18:54:41,015 | INFO     | -- intersect: 811487090.3730351
[2025-10-06 20:55:16] 2025-10-06 18:54:41,015 | INFO     | intersect: 811487090.3730351
[2025-10-06 20:55:16] 2025-10-06 18:54:41,015 | INFO     | chi2: 0.8490095414266989
[2025-10-06 20:55:16] 2025-10-06 18:54:41,016 | INFO     | current chi2=0.8490095414266989 (change=67.5494325015411 %)
[2025-10-06 20:55:16] 2025-10-06 18:54:41,016 | INFO     | sum of square deviations: 3168461268.0
[2025-10-06 20:55:16] 2025-10-06 18:54:41,018 | INFO     | sum of deviations: -6417784258.000001
[2025-10-06 20:55:16] 2025-10-06 18:54:41,021 | INFO     | mean x: 1759770162.0
[2025-10-06 20:55:16] 2025-10-06 18:54:41,021 | INFO     | mean y: 2476438.6820276496
[2025-10-06 20:55:16] 2025-10-06 18:54:41,021 | INFO     | -- intersect: 3566927535.9525375
[2025-10-06 20:55:16] 2025-10-06 18:54:41,021 | INFO     | intersect: 3566927535.9525375
[2025-10-06 20:55:16] 2025-10-06 18:54:41,022 | INFO     | chi2: 0.8249587695899749
[2025-10-06 20:55:16] 2025-10-06 18:54:41,022 | INFO     | current chi2=0.8249587695899749 (change=2.8328034801951008 %)
[2025-10-06 20:55:16] 2025-10-06 18:54:41,022 | INFO     | left removable region: 30
[2025-10-06 20:55:16] 2025-10-06 18:54:41,022 | INFO     | sum of square deviations: 2334722845.0
[2025-10-06 20:55:16] 2025-10-06 18:54:41,024 | INFO     | sum of deviations: 4575870104.0
[2025-10-06 20:55:16] 2025-10-06 18:54:41,024 | INFO     | time since job start (14637s) is within the limit (172800.0s)
[2025-10-06 20:55:16] 2025-10-06 18:54:41,031 | INFO     | mean x: 1759770436.5
[2025-10-06 20:55:16] 2025-10-06 18:54:41,034 | INFO     | mean y: 2489018.724489796
[2025-10-06 20:55:16] 2025-10-06 18:54:41,034 | INFO     | -- intersect: -3446520334.7961764
[2025-10-06 20:55:16] 2025-10-06 18:54:41,034 | INFO     | intersect: -3446520334.7961764
[2025-10-06 20:55:16] 2025-10-06 18:54:41,034 | INFO     | chi2: 0.0007410140284103057
[2025-10-06 20:55:16] 2025-10-06 18:54:41,035 | INFO     | -- intersect: -3446520334.7961764
[2025-10-06 20:55:16] 2025-10-06 18:54:41,035 | INFO     | current memory leak: 1.96 B/s (using 196 data points, chi2=0.00)
[2025-10-06 20:55:16] 2025-10-06 18:54:41,036 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-06 20:55:16] 2025-10-06 18:54:41,036 | INFO     | ..............................
[2025-10-06 20:55:16] 2025-10-06 18:54:41,036 | INFO     | . Timing measurements:
[2025-10-06 20:55:16] 2025-10-06 18:54:41,036 | INFO     | . get job = 0 s
[2025-10-06 20:55:16] 2025-10-06 18:54:41,036 | INFO     | . initial setup = 7 s
[2025-10-06 20:55:16] 2025-10-06 18:54:41,036 | INFO     | . payload setup = 121 s
[2025-10-06 20:55:16] 2025-10-06 18:54:41,036 | INFO     | . stage-in = 0 s
[2025-10-06 20:55:16] 2025-10-06 18:54:41,036 | INFO     | . payload execution = 14292 s
[2025-10-06 20:55:16] 2025-10-06 18:54:41,036 | INFO     | . stage-out = 4 s
[2025-10-06 20:55:16] 2025-10-06 18:54:41,036 | INFO     | . log creation = 1 s
[2025-10-06 20:55:16] 2025-10-06 18:54:41,037 | INFO     | ..............................
[2025-10-06 20:55:16] 2025-10-06 18:54:41,522 | INFO     | 
[2025-10-06 20:55:16] 2025-10-06 18:54:41,522 | INFO     | job summary report
[2025-10-06 20:55:16] 2025-10-06 18:54:41,522 | INFO     | --------------------------------------------------
[2025-10-06 20:55:16] 2025-10-06 18:54:41,522 | INFO     | PanDA job id: 6831535199
[2025-10-06 20:55:16] 2025-10-06 18:54:41,522 | INFO     | task id: 46376905
[2025-10-06 20:55:16] 2025-10-06 18:54:41,522 | INFO     | errors: (none)
[2025-10-06 20:55:16] 2025-10-06 18:54:41,522 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 20:55:16] 2025-10-06 18:54:41,523 | INFO     | pilot state: finished 
[2025-10-06 20:55:16] 2025-10-06 18:54:41,523 | INFO     | transexitcode: 0
[2025-10-06 20:55:16] 2025-10-06 18:54:41,523 | INFO     | exeerrorcode: 0
[2025-10-06 20:55:16] 2025-10-06 18:54:41,523 | INFO     | exeerrordiag: 
[2025-10-06 20:55:16] 2025-10-06 18:54:41,523 | INFO     | exitcode: 0
[2025-10-06 20:55:16] 2025-10-06 18:54:41,523 | INFO     | exitmsg: OK
[2025-10-06 20:55:16] 2025-10-06 18:54:41,523 | INFO     | cpuconsumptiontime: 48169 s
[2025-10-06 20:55:16] 2025-10-06 18:54:41,523 | INFO     | nevents: 400
[2025-10-06 20:55:16] 2025-10-06 18:54:41,523 | INFO     | neventsw: 0
[2025-10-06 20:55:16] 2025-10-06 18:54:41,524 | INFO     | pid: 2986
[2025-10-06 20:55:16] 2025-10-06 18:54:41,524 | INFO     | pgrp: 2986
[2025-10-06 20:55:16] 2025-10-06 18:54:41,524 | INFO     | corecount: 8
[2025-10-06 20:55:16] 2025-10-06 18:54:41,524 | INFO     | event service: False
[2025-10-06 20:55:16] 2025-10-06 18:54:41,524 | INFO     | sizes: {0: 2348645, 1: 2348844, 12: 2348844, 23: 2348872, 34: 2348900, 44: 2348928, 55: 2349084, 65: 2349374, 66: 2349402, 14417: 2379621, 14418: 2379620, 14422: 2
[2025-10-06 20:55:16] 2025-10-06 18:54:41,524 | INFO     | --------------------------------------------------
[2025-10-06 20:55:16] 2025-10-06 18:54:41,524 | INFO     | 
[2025-10-06 20:55:16] 2025-10-06 18:54:41,524 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-10-06 20:55:16] 2025-10-06 18:54:42,028 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 20:55:16] 2025-10-06 18:54:42,028 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 20:55:16] 2025-10-06 18:54:42,029 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 20:55:16] 2025-10-06 18:54:42,029 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 20:55:16] 2025-10-06 18:54:42,029 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 20:55:16] 2025-10-06 18:54:42,029 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 20:55:16] 2025-10-06 18:54:42,029 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 20:55:16] 2025-10-06 18:54:42,029 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 20:55:16] 2025-10-06 18:54:42,029 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 20:55:16] 2025-10-06 18:54:42,029 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 20:55:16] 2025-10-06 18:54:42,029 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 20:55:16] 2025-10-06 18:54:42,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 20:55:16] 2025-10-06 18:54:42,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 20:55:16] 2025-10-06 18:54:42,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 20:55:16] 2025-10-06 18:54:42,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 20:55:16] 2025-10-06 18:54:42,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 20:55:16] 2025-10-06 18:54:42,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 20:55:16] 2025-10-06 18:54:42,030 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 20:55:16] 2025-10-06 18:54:42,030 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 20:55:16] 2025-10-06 18:54:42,031 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 20:55:16] 2025-10-06 18:54:42,031 | INFO     | job 6831535199 has completed (purged errors)
[2025-10-06 20:55:16] 2025-10-06 18:54:42,031 | INFO     | overall cleanup function is called
[2025-10-06 20:55:16] 2025-10-06 18:54:43,040 | INFO     | --- collectZombieJob: --- 10, [2986]
[2025-10-06 20:55:16] 2025-10-06 18:54:43,040 | INFO     | zombie collector waiting for pid 2986
[2025-10-06 20:55:16] 2025-10-06 18:54:43,040 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 20:55:16] 2025-10-06 18:54:43,040 | INFO     | collected zombie processes
[2025-10-06 20:55:16] 2025-10-06 18:54:43,040 | INFO     | will attempt to kill all subprocesses of pid=2986
[2025-10-06 20:55:16] 2025-10-06 18:54:43,173 | INFO     | process IDs to be killed: [2986] (in reverse order)
[2025-10-06 20:55:16] 2025-10-06 18:54:43,413 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 20:55:16] 2025-10-06 18:54:43,418 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 20:55:16] 2025-10-06 18:54:43,421 | INFO     | did not find any defunct processes belonging to 2986
[2025-10-06 20:55:16] 2025-10-06 18:54:43,424 | INFO     | did not find any defunct processes belonging to 2986
[2025-10-06 20:55:16] 2025-10-06 18:54:43,424 | INFO     | ready for new job
[2025-10-06 20:55:16] 2025-10-06 18:54:43,425 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 20:55:16] 2025-10-06 18:54:43,427 | INFO     | ***************************************
[2025-10-06 20:55:16] 2025-10-06 18:54:43,427 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 20:55:16] 2025-10-06 18:54:43,427 | INFO     | ***************************************
[2025-10-06 20:55:16] 2025-10-06 18:54:43,427 | INFO     | 
[2025-10-06 20:55:16] 2025-10-06 18:54:43,428 | INFO     | pilot is running in a VM
[2025-10-06 20:55:16] 2025-10-06 18:54:43,428 | INFO     | architecture information:
[2025-10-06 20:55:16] 2025-10-06 18:54:43,433 | INFO     | executing command: cat /etc/os-release
[2025-10-06 20:55:16] 2025-10-06 18:54:43,557 | INFO     | cat /etc/os-release:
[2025-10-06 20:55:16] NAME="CentOS Linux"
[2025-10-06 20:55:16] VERSION="7 (Core)"
[2025-10-06 20:55:16] ID="centos"
[2025-10-06 20:55:16] ID_LIKE="rhel fedora"
[2025-10-06 20:55:16] VERSION_ID="7"
[2025-10-06 20:55:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 20:55:16] ANSI_COLOR="0;31"
[2025-10-06 20:55:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 20:55:16] HOME_URL="https://www.centos.org/"
[2025-10-06 20:55:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 20:55:16] 
[2025-10-06 20:55:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 20:55:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 20:55:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 20:55:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 20:55:16] 
[2025-10-06 20:55:16] 2025-10-06 18:54:43,558 | INFO     | ***************************************
[2025-10-06 20:55:16] 2025-10-06 18:54:44,060 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-10-06 20:55:16] 2025-10-06 18:54:44,129 | INFO     | sufficient remaining disk space (494965620736 B)
[2025-10-06 20:55:16] 2025-10-06 18:54:44,129 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 20:55:16] 2025-10-06 18:54:44,130 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 20:55:16] 2025-10-06 18:54:44,130 | INFO     | update_server=False
[2025-10-06 20:55:16] 2025-10-06 18:54:44,130 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 20:55:16] 2025-10-06 18:54:44,360 | INFO     | all data control threads have been joined
[2025-10-06 20:55:16] 2025-10-06 18:54:44,443 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 20:55:16] 2025-10-06 18:54:44,604 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-06 20:55:16] 2025-10-06 18:54:44,604 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-06 20:55:16] 2025-10-06 18:54:44,604 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 20:55:16] 2025-10-06 18:54:44,604 | INFO     | will abort loop
[2025-10-06 20:55:16] 2025-10-06 18:54:45,108 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 20:55:16] 2025-10-06 18:54:45,136 | INFO     | [job] retrieve thread has finished
[2025-10-06 20:55:16] 2025-10-06 18:54:45,151 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 20:55:16] 2025-10-06 18:54:45,365 | INFO     | [data] control thread has finished
[2025-10-06 20:55:16] 2025-10-06 18:54:45,550 | INFO     | all payload control threads have been joined
[2025-10-06 20:55:16] 2025-10-06 18:54:45,609 | INFO     | [job] job monitor thread has finished
[2025-10-06 20:55:16] 2025-10-06 18:54:45,630 | INFO     | [job] validate thread has finished
[2025-10-06 20:55:16] 2025-10-06 18:54:45,731 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 20:55:16] 2025-10-06 18:54:45,736 | INFO     | all job control threads have been joined
[2025-10-06 20:55:16] 2025-10-06 18:54:45,902 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 20:55:16] 2025-10-06 18:54:45,902 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 20:55:16] 2025-10-06 18:54:46,076 | INFO     | [data] copytool_in thread has finished
[2025-10-06 20:55:16] 2025-10-06 18:54:46,176 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 20:55:16] 2025-10-06 18:54:46,178 | INFO     | [payload] validate_post thread has finished
[2025-10-06 20:55:16] 2025-10-06 18:54:46,212 | INFO     | [payload] failed_post thread has finished
[2025-10-06 20:55:16] 2025-10-06 18:54:46,448 | INFO     | [data] copytool_out thread has finished
[2025-10-06 20:55:16] 2025-10-06 18:54:46,555 | INFO     | [payload] control thread has finished
[2025-10-06 20:55:16] 2025-10-06 18:54:46,742 | INFO     | [job] control thread has finished
[2025-10-06 20:55:16] 2025-10-06 18:54:47,181 | INFO     | [job] queue monitor thread has finished
[2025-10-06 20:55:16] 2025-10-06 18:54:49,114 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 20:55:16] 2025-10-06 18:55:09,508 | INFO     | [monitor] cgroup control has ended
[2025-10-06 20:55:16] 2025-10-06 18:55:09,897 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139988696811328)>', '<ExcThread(monitor, started 139988234639104)>']
[2025-10-06 20:55:16] 2025-10-06 18:55:14,251 | INFO     | PID=28844 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-06 20:55:16] 2025-10-06 18:55:14,251 | INFO     | .. there are 9 such processes running
[2025-10-06 20:55:16] 2025-10-06 18:55:14,252 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 20:55:16] 2025-10-06 18:55:14,252 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 20:55:16] 2025-10-06 18:55:14,252 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 20:55:16] 2025-10-06 18:55:14,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 20:55:16] 2025-10-06 18:55:14,252 | INFO     | [monitor] control thread has ended
[2025-10-06 20:55:16] 2025-10-06 18:55:14,922 | INFO     | all workflow threads have been joined
[2025-10-06 20:55:16] 2025-10-06 18:55:14,922 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 20:55:16] 2025-10-06 18:55:14,922 | INFO     | traces error code: 0
[2025-10-06 20:55:16] 2025-10-06 18:55:14,922 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 20:55:16] 2025-10-06 18:55:15,260 [wrapper] ==== pilot stdout END ====
[2025-10-06 20:55:16] 2025-10-06 18:55:15,275 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 20:55:16] 2025-10-06 18:55:15,296 [wrapper] pilotpid: 28844
[2025-10-06 20:55:16] 2025-10-06 18:55:15,323 [wrapper] Pilot exit status: 0
[2025-10-06 20:55:16] 2025-10-06 18:55:15,439 [wrapper] pandaids: 6831535199
[2025-10-06 20:55:16] 2025-10-06 18:55:15,681 [wrapper] cleanup supervisor_pilot 29839 28845
[2025-10-06 20:55:16] 2025-10-06 18:55:15,699 [wrapper] Test setup, not cleaning
[2025-10-06 20:55:16] 2025-10-06 18:55:15,722 [wrapper] apfmon messages muted
[2025-10-06 20:55:16] 2025-10-06 18:55:15,746 [wrapper] ==== wrapper stdout END ====
[2025-10-06 20:55:16] 2025-10-06 18:55:15,763 [wrapper] ==== wrapper stderr END ====
[2025-10-06 20:55:16]  *** Error codes and diagnostics ***
[2025-10-06 20:55:16]     "exeErrorCode": 0,
[2025-10-06 20:55:16]     "exeErrorDiag": "",
[2025-10-06 20:55:16]     "pilotErrorCode": 0,
[2025-10-06 20:55:16]     "pilotErrorDiag": "",
[2025-10-06 20:55:16]  *** Listing of results directory ***
[2025-10-06 20:55:16] total 391336
[2025-10-06 20:55:16] -rw-r--r--. 1 boinc boinc    552446 Oct  5 14:57 pilot3.tar.gz
[2025-10-06 20:55:16] -rw-r--r--. 1 boinc boinc      5112 Oct  5 15:09 queuedata.json
[2025-10-06 20:55:16] -rwx------. 1 boinc boinc     36292 Oct  5 15:09 runpilot2-wrapper.sh
[2025-10-06 20:55:16] -rw-r--r--. 1 boinc boinc       100 Oct  6 16:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 20:55:16] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 16:46 run_atlas
[2025-10-06 20:55:16] -rw-r--r--. 1 boinc boinc       105 Oct  6 16:46 job.xml
[2025-10-06 20:55:16] -rw-r--r--. 1 boinc boinc      6389 Oct  6 16:46 init_data.xml
[2025-10-06 20:55:16] -rw-r--r--. 2 boinc boinc 213621739 Oct  6 16:46 EVNT.46376901._003128.pool.root.1
[2025-10-06 20:55:16] -rw-r--r--. 2 boinc boinc     15120 Oct  6 16:46 start_atlas.sh
[2025-10-06 20:55:16] drwxrwx--x. 2 boinc boinc        68 Oct  6 16:46 shared
[2025-10-06 20:55:16] -rw-r--r--. 2 boinc boinc    565601 Oct  6 16:46 input.tar.gz
[2025-10-06 20:55:16] -rw-r--r--. 1 boinc boinc         0 Oct  6 16:46 boinc_lockfile
[2025-10-06 20:55:16] -rw-r--r--. 1 boinc boinc      2519 Oct  6 16:47 pandaJob.out
[2025-10-06 20:55:16] -rw-------. 1 boinc boinc    975002 Oct  6 16:50 agis_schedconf.cvmfs.json
[2025-10-06 20:55:16] drwx------. 4 boinc boinc      4096 Oct  6 16:50 pilot3
[2025-10-06 20:55:16] -rw-------. 1 boinc boinc 178400064 Oct  6 20:52 HITS.46376905._085198.pool.root.1
[2025-10-06 20:55:16] -rw-r--r--. 1 boinc boinc       531 Oct  6 20:52 boinc_task_state.xml
[2025-10-06 20:55:16] -rw-------. 1 boinc boinc      1014 Oct  6 20:53 memory_monitor_summary.json
[2025-10-06 20:55:16] -rw-------. 1 boinc boinc   1560401 Oct  6 20:53 agis_ddmendpoints.agis.ALL.json
[2025-10-06 20:55:16] -rw-------. 1 boinc boinc    465650 Oct  6 20:53 log.46376905._085198.job.log.tgz.1
[2025-10-06 20:55:16] -rw-------. 1 boinc boinc      7781 Oct  6 20:54 heartbeat.json
[2025-10-06 20:55:16] -rw-r--r--. 1 boinc boinc      8192 Oct  6 20:54 boinc_mmap_file
[2025-10-06 20:55:16] -rw-r--r--. 1 boinc boinc        28 Oct  6 20:54 wrapper_checkpoint.txt
[2025-10-06 20:55:16] -rw-------. 1 boinc boinc        95 Oct  6 20:55 pilot_heartbeat.json
[2025-10-06 20:55:16] -rw-------. 1 boinc boinc      5070 Oct  6 20:55 pilotlog.txt
[2025-10-06 20:55:16] -rw-------. 1 boinc boinc   1952499 Oct  6 20:55 log.46376905._085198.job.log.1
[2025-10-06 20:55:16] -rw-------. 1 boinc boinc       357 Oct  6 20:55 output.list
[2025-10-06 20:55:16] -rw-r--r--. 1 boinc boinc       620 Oct  6 20:55 runtime_log
[2025-10-06 20:55:16] -rw-------. 1 boinc boinc   2437120 Oct  6 20:55 result.tar.gz
[2025-10-06 20:55:16] -rw-------. 1 boinc boinc       656 Oct  6 20:55 YEKKDmnfdP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHQPNDmxUVDLm.diag
[2025-10-06 20:55:16] -rw-r--r--. 1 boinc boinc      8703 Oct  6 20:55 runtime_log.err
[2025-10-06 20:55:16] -rw-r--r--. 1 boinc boinc     20665 Oct  6 20:55 stderr.txt
[2025-10-06 20:55:17] HITS file was successfully produced:
[2025-10-06 20:55:17] -rw-------. 1 boinc boinc 178400064 Oct  6 20:52 shared/HITS.pool.root.1
[2025-10-06 20:55:17]  *** Contents of shared directory: ***
[2025-10-06 20:55:17] total 385788
[2025-10-06 20:55:17] -rw-r--r--. 2 boinc boinc 213621739 Oct  6 16:46 ATLAS.root_0
[2025-10-06 20:55:17] -rw-r--r--. 2 boinc boinc     15120 Oct  6 16:46 start_atlas.sh
[2025-10-06 20:55:17] -rw-r--r--. 2 boinc boinc    565601 Oct  6 16:46 input.tar.gz
[2025-10-06 20:55:17] -rw-------. 1 boinc boinc 178400064 Oct  6 20:52 HITS.pool.root.1
[2025-10-06 20:55:17] -rw-------. 1 boinc boinc   2437120 Oct  6 20:55 result.tar.gz
20:55:18 (25023): run_atlas exited; CPU time 48375.593785
20:55:18 (25023): called boinc_finish(0)

</stderr_txt>
]]>

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