Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:49:35 (1022850): wrapper (7.7.26015): starting
20:49:35 (1022850): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 20:49:35] Arguments: --nthreads 4
[2025-10-10 20:49:35] Threads: 4
[2025-10-10 20:49:35] Checking for CVMFS
[2025-10-10 20:49:35] No cvmfs_config command found, will try listing directly
[2025-10-10 20:49:35] CVMFS is ok
[2025-10-10 20:49:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 20:49:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 20:49:35] Further information can be found at the LHC@home message board.
[2025-10-10 20:49:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 20:49:35] Checking for apptainer binary...
[2025-10-10 20:49:35] which: no apptainer in ((null))
[2025-10-10 20:49:35] apptainer is not installed, using version from CVMFS
[2025-10-10 20:49:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 20:49:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-10-10 20:49:35] apptainer works
[2025-10-10 20:49:35] Set ATHENA_PROC_NUMBER=4
[2025-10-10 20:49:35] Set ATHENA_CORE_NUMBER=4
[2025-10-10 20:49:35] Starting ATLAS job with PandaID=6831457483
[2025-10-10 20:49:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 00:00:37]  *** The last 200 lines of the pilot log: ***
[2025-10-11 00:00:37] 2025-10-10 21:30:07,860 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6831457483/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 00:00:37] 2025-10-10 21:30:07,861 | INFO     | extracted standard info from prmon json
[2025-10-11 00:00:37] 2025-10-10 21:30:07,862 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 00:00:37] 2025-10-10 21:30:07,866 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 00:00:37] 2025-10-10 21:30:07,866 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 00:00:37] 2025-10-10 21:30:07,866 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 00:00:37] 2025-10-10 21:30:07,870 | INFO     | fitting pss+swap vs Time
[2025-10-11 00:00:37] 2025-10-10 21:30:07,871 | INFO     | sum of square deviations: 1199940638.0
[2025-10-11 00:00:37] 2025-10-10 21:30:07,872 | INFO     | sum of deviations: 11051771441.0
[2025-10-11 00:00:37] 2025-10-10 21:30:07,872 | INFO     | mean x: 1760126986.0
[2025-10-11 00:00:37] 2025-10-10 21:30:07,872 | INFO     | mean y: 2316943.7898089173
[2025-10-11 00:00:37] 2025-10-10 21:30:07,873 | INFO     | -- intersect: -16208919296.055088
[2025-10-11 00:00:37] 2025-10-10 21:30:07,873 | INFO     | intersect: -16208919296.055088
[2025-10-11 00:00:37] 2025-10-10 21:30:07,873 | INFO     | chi2: 1.3407058694688057
[2025-10-11 00:00:37] 2025-10-10 21:30:07,873 | INFO     | sum of square deviations: 1088905998.0
[2025-10-11 00:00:37] 2025-10-10 21:30:07,874 | INFO     | sum of deviations: 10622501753.0
[2025-10-11 00:00:37] 2025-10-10 21:30:07,874 | INFO     | mean x: 1760126833.5
[2025-10-11 00:00:37] 2025-10-10 21:30:07,874 | INFO     | mean y: 2316354.0
[2025-10-11 00:00:37] 2025-10-10 21:30:07,874 | INFO     | -- intersect: -17168082568.126324
[2025-10-11 00:00:37] 2025-10-10 21:30:07,875 | INFO     | intersect: -17168082568.126324
[2025-10-11 00:00:37] 2025-10-10 21:30:07,875 | INFO     | chi2: 1.3419396233481087
[2025-10-11 00:00:37] 2025-10-10 21:30:07,875 | INFO     | current chi2=1.3419396233481087 (change=-0.09202271037955871 %)
[2025-10-11 00:00:37] 2025-10-10 21:30:07,875 | INFO     | right removable region: 151
[2025-10-11 00:00:37] 2025-10-10 21:30:07,875 | INFO     | sum of square deviations: 1088905998.0
[2025-10-11 00:00:37] 2025-10-10 21:30:07,876 | INFO     | sum of deviations: -8007416228.500001
[2025-10-11 00:00:37] 2025-10-10 21:30:07,876 | INFO     | mean x: 1760127138.5
[2025-10-11 00:00:37] 2025-10-10 21:30:07,876 | INFO     | mean y: 2342666.0328947366
[2025-10-11 00:00:37] 2025-10-10 21:30:07,876 | INFO     | -- intersect: 12945673531.079859
[2025-10-11 00:00:37] 2025-10-10 21:30:07,877 | INFO     | intersect: 12945673531.079859
[2025-10-11 00:00:37] 2025-10-10 21:30:07,877 | INFO     | chi2: 0.03239667687272706
[2025-10-11 00:00:37] 2025-10-10 21:30:07,877 | INFO     | current chi2=0.03239667687272706 (change=97.5836104241445 %)
[2025-10-11 00:00:37] 2025-10-10 21:30:07,877 | INFO     | sum of square deviations: 984941258.0
[2025-10-11 00:00:37] 2025-10-10 21:30:07,878 | INFO     | sum of deviations: -6338533363.0
[2025-10-11 00:00:37] 2025-10-10 21:30:07,878 | INFO     | mean x: 1760127291.0
[2025-10-11 00:00:37] 2025-10-10 21:30:07,878 | INFO     | mean y: 2340207.3401360544
[2025-10-11 00:00:37] 2025-10-10 21:30:07,878 | INFO     | -- intersect: 11329539130.639082
[2025-10-11 00:00:37] 2025-10-10 21:30:07,878 | INFO     | intersect: 11329539130.639082
[2025-10-11 00:00:37] 2025-10-10 21:30:07,879 | INFO     | chi2: 0.030659401857648816
[2025-10-11 00:00:37] 2025-10-10 21:30:07,879 | INFO     | current chi2=0.030659401857648816 (change=5.362509932433086 %)
[2025-10-11 00:00:37] 2025-10-10 21:30:07,879 | INFO     | left removable region: 20
[2025-10-11 00:00:37] 2025-10-10 21:30:07,879 | INFO     | sum of square deviations: 697054930.0
[2025-10-11 00:00:37] 2025-10-10 21:30:07,880 | INFO     | sum of deviations: -1789687845.0
[2025-10-11 00:00:37] 2025-10-10 21:30:07,880 | INFO     | mean x: 1760127413.0
[2025-10-11 00:00:37] 2025-10-10 21:30:07,880 | INFO     | mean y: 2332603.9694656488
[2025-10-11 00:00:37] 2025-10-10 21:30:07,880 | INFO     | -- intersect: 4521458000.152224
[2025-10-11 00:00:37] 2025-10-10 21:30:07,880 | INFO     | intersect: 4521458000.152224
[2025-10-11 00:00:37] 2025-10-10 21:30:07,881 | INFO     | chi2: 0.016996915232034573
[2025-10-11 00:00:37] 2025-10-10 21:30:07,881 | INFO     | -- intersect: 4521458000.152224
[2025-10-11 00:00:37] 2025-10-10 21:30:07,881 | INFO     | current memory leak: -2.57 B/s (using 131 data points, chi2=0.02)
[2025-10-11 00:00:37] 2025-10-10 21:30:07,881 | INFO     | could have reported an average CPU frequency of 2674 MHz (9 samples)
[2025-10-11 00:00:37] 2025-10-10 21:30:07,882 | INFO     | ..............................
[2025-10-11 00:00:37] 2025-10-10 21:30:07,882 | INFO     | . Timing measurements:
[2025-10-11 00:00:37] 2025-10-10 21:30:07,882 | INFO     | . get job = 0 s
[2025-10-11 00:00:37] 2025-10-10 21:30:07,882 | INFO     | . initial setup = 1 s
[2025-10-11 00:00:37] 2025-10-10 21:30:07,882 | INFO     | . payload setup = 9 s
[2025-10-11 00:00:37] 2025-10-10 21:30:07,882 | INFO     | . stage-in = 0 s
[2025-10-11 00:00:37] 2025-10-10 21:30:07,882 | INFO     | . payload execution = 9571 s
[2025-10-11 00:00:37] 2025-10-10 21:30:07,882 | INFO     | . stage-out = 0 s
[2025-10-11 00:00:37] 2025-10-10 21:30:07,883 | INFO     | . log creation = 0 s
[2025-10-11 00:00:37] 2025-10-10 21:30:07,883 | INFO     | ..............................
[2025-10-11 00:00:37] 2025-10-10 21:30:08,001 | INFO     | 
[2025-10-11 00:00:37] 2025-10-10 21:30:08,002 | INFO     | job summary report
[2025-10-11 00:00:37] 2025-10-10 21:30:08,002 | INFO     | --------------------------------------------------
[2025-10-11 00:00:37] 2025-10-10 21:30:08,002 | INFO     | PanDA job id: 6831457483
[2025-10-11 00:00:37] 2025-10-10 21:30:08,002 | INFO     | task id: 46376905
[2025-10-11 00:00:37] 2025-10-10 21:30:08,002 | INFO     | errors: (none)
[2025-10-11 00:00:37] 2025-10-10 21:30:08,003 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 00:00:37] 2025-10-10 21:30:08,003 | INFO     | pilot state: finished 
[2025-10-11 00:00:37] 2025-10-10 21:30:08,003 | INFO     | transexitcode: 0
[2025-10-11 00:00:37] 2025-10-10 21:30:08,003 | INFO     | exeerrorcode: 0
[2025-10-11 00:00:37] 2025-10-10 21:30:08,003 | INFO     | exeerrordiag: 
[2025-10-11 00:00:37] 2025-10-10 21:30:08,003 | INFO     | exitcode: 0
[2025-10-11 00:00:37] 2025-10-10 21:30:08,003 | INFO     | exitmsg: OK
[2025-10-11 00:00:37] 2025-10-10 21:30:08,003 | INFO     | cpuconsumptiontime: 36029 s
[2025-10-11 00:00:37] 2025-10-10 21:30:08,003 | INFO     | nevents: 400
[2025-10-11 00:00:37] 2025-10-10 21:30:08,003 | INFO     | neventsw: 0
[2025-10-11 00:00:37] 2025-10-10 21:30:08,003 | INFO     | pid: 1047035
[2025-10-11 00:00:37] 2025-10-10 21:30:08,003 | INFO     | pgrp: 1047035
[2025-10-11 00:00:37] 2025-10-10 21:30:08,004 | INFO     | corecount: 4
[2025-10-11 00:00:37] 2025-10-10 21:30:08,004 | INFO     | event service: False
[2025-10-11 00:00:37] 2025-10-10 21:30:08,004 | INFO     | sizes: {0: 2348827, 1: 2348827, 8: 2349117, 11: 2349145, 9584: 2377807, 9586: 2386827, 9590: 2387011, 9597: 2387269}
[2025-10-11 00:00:37] 2025-10-10 21:30:08,004 | INFO     | --------------------------------------------------
[2025-10-11 00:00:37] 2025-10-10 21:30:08,004 | INFO     | 
[2025-10-11 00:00:37] 2025-10-10 21:30:08,004 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2025-10-11 00:00:37] 2025-10-10 21:30:08,037 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 00:00:37] 2025-10-10 21:30:08,038 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 00:00:37] 2025-10-10 21:30:08,038 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 00:00:37] 2025-10-10 21:30:08,038 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 00:00:37] 2025-10-10 21:30:08,038 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 00:00:37] 2025-10-10 21:30:08,038 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 00:00:37] 2025-10-10 21:30:08,038 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 00:00:37] 2025-10-10 21:30:08,038 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 00:00:37] 2025-10-10 21:30:08,038 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 00:00:37] 2025-10-10 21:30:08,038 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 00:00:37] 2025-10-10 21:30:08,038 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 00:00:37] 2025-10-10 21:30:08,038 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 00:00:37] 2025-10-10 21:30:08,039 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 00:00:37] 2025-10-10 21:30:08,039 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 00:00:37] 2025-10-10 21:30:08,039 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 00:00:37] 2025-10-10 21:30:08,039 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 00:00:37] 2025-10-10 21:30:08,039 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 00:00:37] 2025-10-10 21:30:08,039 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 00:00:37] 2025-10-10 21:30:08,039 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 00:00:37] 2025-10-10 21:30:08,039 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 00:00:37] 2025-10-10 21:30:08,039 | INFO     | job 6831457483 has completed (purged errors)
[2025-10-11 00:00:37] 2025-10-10 21:30:08,040 | INFO     | overall cleanup function is called
[2025-10-11 00:00:37] 2025-10-10 21:30:08,453 | INFO     | PID=1031107 has CPU usage=16.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 00:00:37] 2025-10-10 21:30:08,453 | INFO     | .. there are 12 such processes running
[2025-10-11 00:00:37] 2025-10-10 21:30:09,055 | INFO     | --- collectZombieJob: --- 10, [1047035]
[2025-10-11 00:00:37] 2025-10-10 21:30:09,055 | INFO     | zombie collector waiting for pid 1047035
[2025-10-11 00:00:37] 2025-10-10 21:30:09,055 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 00:00:37] 2025-10-10 21:30:09,056 | INFO     | collected zombie processes
[2025-10-11 00:00:37] 2025-10-10 21:30:09,056 | INFO     | will attempt to kill all subprocesses of pid=1047035
[2025-10-11 00:00:37] 2025-10-10 21:30:09,909 | INFO     | process IDs to be killed: [1047035] (in reverse order)
[2025-10-11 00:00:37] 2025-10-10 21:30:10,188 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 00:00:37] 2025-10-10 21:30:10,189 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 00:00:37] 2025-10-10 21:30:10,223 | INFO     | did not find any defunct processes belonging to 1047035
[2025-10-11 00:00:37] 2025-10-10 21:30:10,256 | INFO     | did not find any defunct processes belonging to 1047035
[2025-10-11 00:00:37] 2025-10-10 21:30:10,257 | INFO     | ready for new job
[2025-10-11 00:00:37] 2025-10-10 21:30:10,261 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 00:00:37] 2025-10-10 21:30:10,263 | INFO     | ***************************************
[2025-10-11 00:00:37] 2025-10-10 21:30:10,264 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-11 00:00:37] 2025-10-10 21:30:10,264 | INFO     | ***************************************
[2025-10-11 00:00:37] 2025-10-10 21:30:10,264 | INFO     | 
[2025-10-11 00:00:37] 2025-10-10 21:30:10,272 | INFO     | architecture information:
[2025-10-11 00:00:37] 2025-10-10 21:30:10,273 | INFO     | executing command: cat /etc/os-release
[2025-10-11 00:00:37] 2025-10-10 21:30:10,294 | INFO     | cat /etc/os-release:
[2025-10-11 00:00:37] NAME="CentOS Linux"
[2025-10-11 00:00:37] VERSION="7 (Core)"
[2025-10-11 00:00:37] ID="centos"
[2025-10-11 00:00:37] ID_LIKE="rhel fedora"
[2025-10-11 00:00:37] VERSION_ID="7"
[2025-10-11 00:00:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 00:00:37] ANSI_COLOR="0;31"
[2025-10-11 00:00:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 00:00:37] HOME_URL="https://www.centos.org/"
[2025-10-11 00:00:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 00:00:37] 
[2025-10-11 00:00:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 00:00:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 00:00:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 00:00:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 00:00:37] 
[2025-10-11 00:00:37] 2025-10-10 21:30:10,295 | INFO     | ***************************************
[2025-10-11 00:00:37] 2025-10-10 21:30:10,798 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2025-10-11 00:00:37] 2025-10-10 21:30:10,827 | INFO     | sufficient remaining disk space (3313480237056 B)
[2025-10-11 00:00:37] 2025-10-10 21:30:10,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 00:00:37] 2025-10-10 21:30:10,828 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 00:00:37] 2025-10-10 21:30:10,828 | INFO     | update_server=False
[2025-10-11 00:00:37] 2025-10-10 21:30:10,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 00:00:37] 2025-10-10 21:30:10,878 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 00:00:37] 2025-10-10 21:30:11,141 | INFO     | all payload control threads have been joined
[2025-10-11 00:00:37] 2025-10-10 21:30:11,176 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 00:00:37] 2025-10-10 21:30:11,176 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 00:00:37] 2025-10-10 21:30:11,176 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 00:00:37] 2025-10-10 21:30:11,176 | INFO     | will abort loop
[2025-10-11 00:00:37] 2025-10-10 21:30:11,525 | INFO     | all data control threads have been joined
[2025-10-11 00:00:37] 2025-10-10 21:30:11,630 | INFO     | all job control threads have been joined
[2025-10-11 00:00:37] 2025-10-10 21:30:11,833 | INFO     | [job] retrieve thread has finished
[2025-10-11 00:00:37] 2025-10-10 21:30:12,136 | INFO     | [payload] validate_post thread has finished
[2025-10-11 00:00:37] 2025-10-10 21:30:12,146 | INFO     | [payload] control thread has finished
[2025-10-11 00:00:37] 2025-10-10 21:30:12,181 | INFO     | [job] job monitor thread has finished
[2025-10-11 00:00:37] 2025-10-10 21:30:12,309 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 00:00:37] 2025-10-10 21:30:12,398 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 00:00:37] 2025-10-10 21:30:12,530 | INFO     | [data] control thread has finished
[2025-10-11 00:00:37] 2025-10-10 21:30:12,544 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 00:00:37] 2025-10-10 21:30:12,550 | INFO     | [job] validate thread has finished
[2025-10-11 00:00:37] 2025-10-10 21:30:12,631 | INFO     | [job] control thread has finished
[2025-10-11 00:00:37] 2025-10-10 21:30:12,653 | INFO     | [data] copytool_in thread has finished
[2025-10-11 00:00:37] 2025-10-10 21:30:12,845 | INFO     | [payload] failed_post thread has finished
[2025-10-11 00:00:37] 2025-10-10 21:30:13,012 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 00:00:37] 2025-10-10 21:30:13,026 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 00:00:37] 2025-10-10 21:30:14,017 | INFO     | [job] queue monitor thread has finished
[2025-10-11 00:00:37] 2025-10-10 21:30:14,314 | INFO     | [data] copytool_out thread has finished
[2025-10-11 00:00:37] 2025-10-10 21:30:14,884 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 00:00:37] 2025-10-10 21:30:21,609 | INFO     | job.realtimelogging is not enabled
[2025-10-11 00:00:37] 2025-10-10 21:30:22,614 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 00:00:37] 2025-10-10 21:30:41,537 | INFO     | PID=1031107 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 00:00:37] 2025-10-10 21:30:41,537 | INFO     | .. there are 12 such processes running
[2025-10-11 00:00:37] 2025-10-10 21:30:41,538 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 00:00:37] 2025-10-10 21:30:41,538 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 00:00:37] 2025-10-10 21:30:41,538 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 00:00:37] 2025-10-10 21:31:08,077 | INFO     | [monitor] cgroup control has ended
[2025-10-11 00:00:37] 2025-10-10 21:31:09,153 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22743277950784)>', '<ExcThread(monitor, started 22743040886528)>']
[2025-10-11 00:00:37] 2025-10-10 21:31:09,674 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 00:00:37] 2025-10-10 21:31:09,674 | INFO     | [monitor] control thread has ended
[2025-10-11 00:00:37] 2025-10-10 21:31:14,178 | INFO     | all workflow threads have been joined
[2025-10-11 00:00:37] 2025-10-10 21:31:14,178 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 00:00:37] 2025-10-10 21:31:14,178 | INFO     | traces error code: 0
[2025-10-11 00:00:37] 2025-10-10 21:31:14,179 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 00:00:37] 2025-10-10 21:31:14,384 [wrapper] ==== pilot stdout END ====
[2025-10-11 00:00:37] 2025-10-10 21:31:14,388 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 00:00:37] 2025-10-10 21:31:14,392 [wrapper] pilotpid: 1031107
[2025-10-11 00:00:37] 2025-10-10 21:31:14,396 [wrapper] Pilot exit status: 0
[2025-10-11 00:00:37] 2025-10-10 21:31:14,412 [wrapper] pandaids: 6831457483
[2025-10-11 00:00:37] 2025-10-10 21:31:14,585 [wrapper] cleanup supervisor_pilot 1477534 1031108
[2025-10-11 00:00:37] 2025-10-10 21:31:14,589 [wrapper] Test setup, not cleaning
[2025-10-11 00:00:37] 2025-10-10 21:31:14,593 [wrapper] apfmon messages muted
[2025-10-11 00:00:37] 2025-10-10 21:31:14,597 [wrapper] ==== wrapper stdout END ====
[2025-10-11 00:00:37] 2025-10-10 21:31:14,600 [wrapper] ==== wrapper stderr END ====
[2025-10-11 00:00:37]  *** Error codes and diagnostics ***
[2025-10-11 00:00:37]     "exeErrorCode": 0,
[2025-10-11 00:00:37]     "exeErrorDiag": "",
[2025-10-11 00:00:37]     "pilotErrorCode": 0,
[2025-10-11 00:00:37]     "pilotErrorDiag": "",
[2025-10-11 00:00:37]  *** Listing of results directory ***
[2025-10-11 00:00:37] total 396836
[2025-10-11 00:00:37] -rw-r--r-- 1 boinc boinc    552446 Oct  5 14:57 pilot3.tar.gz
[2025-10-11 00:00:37] -rwx------ 1 boinc boinc     36292 Oct  5 14:59 runpilot2-wrapper.sh
[2025-10-11 00:00:37] -rw-r--r-- 1 boinc boinc      5112 Oct  5 14:59 queuedata.json
[2025-10-11 00:00:37] -rw-r--r-- 1 boinc boinc       100 Oct 10 20:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 00:00:37] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 20:49 run_atlas
[2025-10-11 00:00:37] -rw-r--r-- 1 boinc boinc       105 Oct 10 20:49 job.xml
[2025-10-11 00:00:37] -rw-r--r-- 2 boinc boinc 214097308 Oct 10 20:49 EVNT.46376901._003123.pool.root.1
[2025-10-11 00:00:37] -rw-r--r-- 1 boinc boinc      6685 Oct 10 20:49 init_data.xml
[2025-10-11 00:00:37] drwxrwx--x 2 boinc boinc      4096 Oct 10 20:49 shared
[2025-10-11 00:00:37] -rw-r--r-- 2 boinc boinc    565597 Oct 10 20:49 input.tar.gz
[2025-10-11 00:00:37] -rw-r--r-- 2 boinc boinc     15120 Oct 10 20:49 start_atlas.sh
[2025-10-11 00:00:37] -rw-r--r-- 1 boinc boinc         0 Oct 10 20:49 boinc_lockfile
[2025-10-11 00:00:37] -rw-r--r-- 1 boinc boinc      2519 Oct 10 20:49 pandaJob.out
[2025-10-11 00:00:37] -rw------- 1 boinc boinc    975525 Oct 10 20:49 agis_schedconf.cvmfs.json
[2025-10-11 00:00:37] -rw------- 1 boinc boinc   1560580 Oct 10 20:49 agis_ddmendpoints.agis.ALL.json
[2025-10-11 00:00:37] drwx------ 4 boinc boinc      4096 Oct 10 20:49 pilot3
[2025-10-11 00:00:37] -rw------- 1 boinc boinc 185070704 Oct 10 23:29 HITS.46376905._085033.pool.root.1
[2025-10-11 00:00:37] -rw-r--r-- 1 boinc boinc       528 Oct 10 23:29 boinc_task_state.xml
[2025-10-11 00:00:37] -rw------- 1 boinc boinc      1028 Oct 10 23:29 memory_monitor_summary.json
[2025-10-11 00:00:37] -rw------- 1 boinc boinc    328958 Oct 10 23:29 log.46376905._085033.job.log.tgz.1
[2025-10-11 00:00:37] -rw------- 1 boinc boinc      7777 Oct 10 23:30 heartbeat.json
[2025-10-11 00:00:37] -rw------- 1 boinc boinc        95 Oct 10 23:30 pilot_heartbeat.json
[2025-10-11 00:00:37] -rw------- 1 boinc boinc      5093 Oct 10 23:31 pilotlog.txt
[2025-10-11 00:00:37] -rw------- 1 boinc boinc   1316833 Oct 10 23:31 log.46376905._085033.job.log.1
[2025-10-11 00:00:37] -rw------- 1 boinc boinc       357 Oct 10 23:31 output.list
[2025-10-11 00:00:37] -rw-r--r-- 1 boinc boinc       620 Oct 10 23:31 runtime_log
[2025-10-11 00:00:37] -rw------- 1 boinc boinc   1669120 Oct 10 23:31 result.tar.gz
[2025-10-11 00:00:37] -rw------- 1 boinc boinc       663 Oct 10 23:31 sF5NDmfVdP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPOPNDmqWOIWm.diag
[2025-10-11 00:00:37] -rw-r--r-- 1 boinc boinc      9069 Oct 10 23:31 runtime_log.err
[2025-10-11 00:00:37] -rw-r--r-- 1 boinc boinc      8192 Oct 11 00:00 boinc_mmap_file
[2025-10-11 00:00:37] -rw-r--r-- 1 boinc boinc        26 Oct 11 00:00 wrapper_checkpoint.txt
[2025-10-11 00:00:37] -rw-r--r-- 1 boinc boinc     20947 Oct 11 00:00 stderr.txt
[2025-10-11 00:00:37] HITS file was successfully produced:
[2025-10-11 00:00:37] -rw------- 1 boinc boinc 185070704 Oct 10 23:29 shared/HITS.pool.root.1
[2025-10-11 00:00:37]  *** Contents of shared directory: ***
[2025-10-11 00:00:37] total 392028
[2025-10-11 00:00:37] -rw-r--r-- 2 boinc boinc 214097308 Oct 10 20:49 ATLAS.root_0
[2025-10-11 00:00:37] -rw-r--r-- 2 boinc boinc    565597 Oct 10 20:49 input.tar.gz
[2025-10-11 00:00:37] -rw-r--r-- 2 boinc boinc     15120 Oct 10 20:49 start_atlas.sh
[2025-10-11 00:00:37] -rw------- 1 boinc boinc 185070704 Oct 10 23:29 HITS.pool.root.1
[2025-10-11 00:00:37] -rw------- 1 boinc boinc   1669120 Oct 10 23:31 result.tar.gz
00:00:39 (1022850): run_atlas exited; CPU time 36668.742812
00:00:39 (1022850): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN