Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-07 02:55:34 (8564): vboxwrapper version 26210
2025-10-07 02:55:34 (8564): BOINC client version: 8.0.2
2025-10-07 02:55:34 (8564): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-10-07 02:55:35 (8564): Successfully copied 'init_data.xml' to the shared directory.
2025-10-07 02:55:35 (8564): Create VM. (boinc_b882ccab7a8c5c3b, slot#0)
2025-10-07 02:55:36 (8564): Setting Memory Size for VM. (4400MB)
2025-10-07 02:55:36 (8564): Setting CPU Count for VM. (4)
2025-10-07 02:55:36 (8564): Setting Chipset Options for VM.
2025-10-07 02:55:37 (8564): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-07 02:55:37 (8564): Setting Boot Options for VM.
2025-10-07 02:55:38 (8564): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-07 02:55:38 (8564): Enabling VM Network Access.
2025-10-07 02:55:38 (8564): Disabling USB Support for VM.
2025-10-07 02:55:39 (8564): Disabling COM Port Support for VM.
2025-10-07 02:55:39 (8564): Disabling LPT Port Support for VM.
2025-10-07 02:55:40 (8564): Disabling Audio Support for VM.
2025-10-07 02:55:40 (8564): Disabling Clipboard Support for VM.
2025-10-07 02:55:40 (8564): Disabling Drag and Drop Support for VM.
2025-10-07 02:55:40 (8564): Adding storage controller(s) to VM.
2025-10-07 02:55:41 (8564): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-07 02:55:43 (8564): Adding VirtualBox Guest Additions to VM.
2025-10-07 02:55:44 (8564): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-07 02:55:44 (8564): forwarding host port 64026 to guest port 80
2025-10-07 02:55:44 (8564): Enabling remote desktop for VM.
2025-10-07 02:55:45 (8564): Required extension pack not installed, remote desktop not enabled.
2025-10-07 02:55:45 (8564): Enabling shared directory for VM.
2025-10-07 02:55:45 (8564): Starting VM using VBoxManage interface. (boinc_b882ccab7a8c5c3b, slot#0)
2025-10-07 02:55:56 (8564): Successfully started VM. (PID = '18192')
2025-10-07 02:55:56 (8564): Reporting VM Process ID to BOINC.
2025-10-07 02:55:56 (8564): Guest Log: BIOS: VirtualBox 7.1.4
2025-10-07 02:55:56 (8564): Guest Log: CPUID EDX: 0x178bfbff
2025-10-07 02:55:56 (8564): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-07 02:55:56 (8564): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-07 02:55:56 (8564): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-07 02:55:56 (8564): Detected: Web Application Enabled (http://localhost:64026)
2025-10-07 02:55:56 (8564): Preference change detected
2025-10-07 02:55:56 (8564): Setting CPU throttle for VM. (100%)
2025-10-07 02:55:56 (8564): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-07 02:55:58 (8564): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-07 02:55:58 (8564): Guest Log: BIOS: Booting from Hard Disk...
2025-10-07 02:56:03 (8564): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-07 02:56:03 (8564): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-07 02:56:03 (8564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-07 02:56:18 (8564): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-07 02:56:18 (8564): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-07 02:56:44 (8564): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-07 02:56:44 (8564): Guest Log: 00:00:00.000210 main     Log opened 2025-10-07T02:56:41.046685000Z
2025-10-07 02:56:44 (8564): Guest Log: 00:00:00.000521 main     OS Product: Linux
2025-10-07 02:56:44 (8564): Guest Log: 00:00:00.000611 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-07 02:56:44 (8564): Guest Log: 00:00:00.000680 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-07 02:56:44 (8564): Guest Log: 00:00:00.000741 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-07 02:56:44 (8564): Guest Log: 00:00:00.000744 main     Process ID: 1316
2025-10-07 02:56:44 (8564): Guest Log: 00:00:00.000746 main     Package type: LINUX_64BITS_GENERIC
2025-10-07 02:56:44 (8564): Guest Log: 00:00:00.003319 main     5.2.32 r132073 started. Verbose level = 0
2025-10-07 02:56:45 (8564): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-07 02:56:45 (8564): Guest Log: [INFO] Mounting shared directory
2025-10-07 02:56:45 (8564): Guest Log: [INFO] Checking for init_data.xml
2025-10-07 02:56:54 (8564): Guest Log: 00:00:10.013487 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 787 788 102 000ns (GuestNow=1 759 795 013 270 896 000 ns GuestLast=1 759 805 801 058 998 000 ns fSetTimeLastLoop=true )
2025-10-07 02:57:21 (8564): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-07 02:57:21 (8564): Guest Log: [INFO] Detected branch: prod
2025-10-07 02:57:22 (8564): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-07 02:57:22 (8564): Guest Log: Copying input files
2025-10-07 02:57:24 (8564): Guest Log: Copied input files into RunAtlas.
2025-10-07 02:57:24 (8564): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-07 02:57:24 (8564): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-07 02:57:24 (8564): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-07 02:57:24 (8564): Guest Log: Further information can be found at the LHC@home message board.
2025-10-07 02:57:34 (8564): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-07 02:57:35 (8564): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-07 02:57:35 (8564): Guest Log: 2.6.3.0 1615 0 32212 151416 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-07 02:57:39 (8564): Guest Log: copied the webapp to /var/www
2025-10-07 02:57:39 (8564): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-07 02:57:39 (8564): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-07 02:57:39 (8564): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-07 02:57:39 (8564): Guest Log:  *** Starting ATLAS job. (PandaID=6831311820 taskID=46376905) ***
2025-10-07 04:37:26 (8564): Status Report: Elapsed Time: '6000.612864'
2025-10-07 04:37:26 (8564): Status Report: CPU Time: '20140.437500'
2025-10-07 06:19:07 (8564): Status Report: Elapsed Time: '12002.139648'
2025-10-07 06:19:07 (8564): Status Report: CPU Time: '43380.343750'
2025-10-07 08:05:43 (8564): Status Report: Elapsed Time: '18002.650627'
2025-10-07 08:05:43 (8564): Status Report: CPU Time: '67393.656250'
2025-10-07 09:48:07 (8564): Status Report: Elapsed Time: '24006.398026'
2025-10-07 09:48:09 (8564): Status Report: CPU Time: '90704.250000'
2025-10-07 11:31:37 (8564): Status Report: Elapsed Time: '30026.514063'
2025-10-07 11:31:41 (8564): Status Report: CPU Time: '114329.515625'
2025-10-07 13:15:00 (8564): Status Report: Elapsed Time: '36026.824852'
2025-10-07 13:15:00 (8564): Status Report: CPU Time: '137740.046875'
2025-10-07 14:18:03 (8564): Guest Log:  *** Job finished ***
2025-10-07 14:18:03 (8564): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:17:34,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:17:34,052 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:17:55,990 | INFO     | [monitor] cgroup control has ended
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:17:56,766 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139952577025856)>', '<ExcThread(monitor, started 139951777773312)>']
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:17:57,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:17:57,155 | INFO     | [monitor] control thread has ended
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:18:01,892 | INFO     | all workflow threads have been joined
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:18:01,893 | INFO     | end of generic workflow (traces error code: 0)
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:18:01,894 | INFO     | traces error code: 0
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:18:01,896 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:18:02,187 [wrapper] ==== pilot stdout END ====
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:18:02,198 [wrapper] ==== wrapper stdout RESUME ====
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:18:02,207 [wrapper] pilotpid: 6008
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:18:02,216 [wrapper] Pilot exit status: 0
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:18:02,319 [wrapper] pandaids: 6831311820
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:18:02,401 [wrapper] cleanup supervisor_pilot 20478 6009
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:18:02,415 [wrapper] Test setup, not cleaning
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:18:02,426 [wrapper] apfmon messages muted
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:18:02,435 [wrapper] ==== wrapper stdout END ====
2025-10-07 14:18:03 (8564): Guest Log: 2025-10-07 11:18:02,445 [wrapper] ==== wrapper stderr END ====
2025-10-07 14:18:03 (8564): Guest Log:  *** Error codes and diagnostics ***
2025-10-07 14:18:03 (8564): Guest Log:     "exeErrorCode": 0,
2025-10-07 14:18:03 (8564): Guest Log:     "exeErrorDiag": "",
2025-10-07 14:18:03 (8564): Guest Log:     "pilotErrorCode": 0,
2025-10-07 14:18:03 (8564): Guest Log:     "pilotErrorDiag": "",
2025-10-07 14:18:03 (8564): Guest Log:  *** Listing of results directory ***
2025-10-07 14:18:03 (8564): Guest Log: total 188480
2025-10-07 14:18:03 (8564): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  5 10:04 pilot3.tar.gz
2025-10-07 14:18:03 (8564): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  5 10:08 queuedata.json
2025-10-07 14:18:03 (8564): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  5 10:08 runpilot2-wrapper.sh
2025-10-07 14:18:03 (8564): Guest Log: -rwxr-xr-x. 1 atlas atlas      8220 Oct  6 23:57 init_data.xml
2025-10-07 14:18:03 (8564): Guest Log: -rwxr-xr-x. 1 atlas atlas    565603 Oct  6 23:57 input.tar.gz
2025-10-07 14:18:03 (8564): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct  6 23:57 start_atlas.sh
2025-10-07 14:18:03 (8564): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  6 23:57 EVNT.46376901._002977.pool.root.1 -> /data/./ATLAS.root_0
2025-10-07 14:18:03 (8564): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Oct  6 23:57 pandaJob.out
2025-10-07 14:18:03 (8564): Guest Log: -rw-------. 1 atlas atlas    975012 Oct  6 23:59 agis_schedconf.cvmfs.json
2025-10-07 14:18:03 (8564): Guest Log: drwx------. 4 atlas atlas      4096 Oct  6 23:59 pilot3
2025-10-07 14:18:03 (8564): Guest Log: -rw-------. 1 atlas atlas 177320431 Oct  7 11:15 HITS.46376905._081310.pool.root.1
2025-10-07 14:18:03 (8564): Guest Log: -rw-------. 1 atlas atlas      1032 Oct  7 11:16 memory_monitor_summary.json
2025-10-07 14:18:03 (8564): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  7 11:16 agis_ddmendpoints.agis.ALL.json
2025-10-07 14:18:03 (8564): Guest Log: -rw-------. 1 atlas atlas    752708 Oct  7 11:16 log.46376905._081310.job.log.tgz.1
2025-10-07 14:18:03 (8564): Guest Log: -rw-------. 1 atlas atlas      7794 Oct  7 11:17 heartbeat.json
2025-10-07 14:18:03 (8564): Guest Log: -rw-------. 1 atlas atlas        95 Oct  7 11:17 pilot_heartbeat.json
2025-10-07 14:18:03 (8564): Guest Log: -rw-------. 1 atlas atlas      4991 Oct  7 11:18 pilotlog.txt
2025-10-07 14:18:03 (8564): Guest Log: -rw-------. 1 atlas atlas   5178414 Oct  7 11:18 log.46376905._081310.job.log.1
2025-10-07 14:18:03 (8564): Guest Log: -rw-------. 1 atlas atlas       357 Oct  7 11:18 output.list
2025-10-07 14:18:03 (8564): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  7 11:18 runtime_log
2025-10-07 14:18:03 (8564): Guest Log: -rw-------. 1 atlas atlas   5949440 Oct  7 11:18 result.tar.gz
2025-10-07 14:18:03 (8564): Guest Log: -rw-------. 1 atlas atlas       667 Oct  7 11:18 WOvNDmfqaP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmzsFMDmymN2Mo.diag
2025-10-07 14:18:03 (8564): Guest Log: -rw-r--r--. 1 atlas atlas      8648 Oct  7 11:18 runtime_log.err
2025-10-07 14:18:03 (8564): Guest Log: Looking for outputfile HITS.46376905._081310.pool.root.1
2025-10-07 14:18:03 (8564): Guest Log: HITS file was successfully produced
2025-10-07 14:18:03 (8564): Guest Log: -rw-------. 1 atlas atlas 177320431 Oct  7 11:15 /home/atlas/RunAtlas/HITS.46376905._081310.pool.root.1
2025-10-07 14:18:08 (8564): Guest Log: Successfully finished the ATLAS job!
2025-10-07 14:18:08 (8564): Guest Log: Copying the results back to the shared directory!
2025-10-07 14:18:08 (8564): Guest Log:  *** Contents of shared directory: ***
2025-10-07 14:18:08 (8564): Guest Log: total 387436
2025-10-07 14:18:08 (8564): Guest Log: -rwxrwxrwx. 1 root root 212858458 Oct  6 23:55 ATLAS.root_0
2025-10-07 14:18:08 (8564): Guest Log: -rwxrwxrwx. 1 root root 177320431 Oct  7 11:18 HITS.pool.root.1
2025-10-07 14:18:08 (8564): Guest Log: -rwxrwxrwx. 1 root root      8220 Oct  6 23:55 init_data.xml
2025-10-07 14:18:08 (8564): Guest Log: -rwxrwxrwx. 1 root root    565603 Oct  5 13:14 input.tar.gz
2025-10-07 14:18:08 (8564): Guest Log: -rwxrwxrwx. 1 root root   5949440 Oct  7 11:18 result.tar.gz
2025-10-07 14:18:08 (8564): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  5 13:14 start_atlas.sh
2025-10-07 14:18:08 (8564): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-07 14:18:08 (8564): VM Completion File Detected.
2025-10-07 14:18:08 (8564): Powering off VM.
2025-10-07 14:18:10 (8564): Successfully stopped VM.
2025-10-07 14:18:10 (8564): Deregistering VM. (boinc_b882ccab7a8c5c3b, slot#0)
2025-10-07 14:18:11 (8564): Removing network bandwidth throttle group from VM.
2025-10-07 14:18:11 (8564): Removing VM from VirtualBox.
2025-10-07 14:18:17 (8564): called boinc_finish(0)

</stderr_txt>
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