Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:32:49 (988550): wrapper (7.7.26015): starting
03:32:49 (988550): wrapper: running run_atlas (--nthreads 4)
[2025-10-09 03:32:49] Arguments: --nthreads 4
[2025-10-09 03:32:49] Threads: 4
[2025-10-09 03:32:49] Checking for CVMFS
[2025-10-09 03:32:49] No cvmfs_config command found, will try listing directly
[2025-10-09 03:32:49] CVMFS is ok
[2025-10-09 03:32:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 03:32:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 03:32:49] Further information can be found at the LHC@home message board.
[2025-10-09 03:32:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 03:32:49] Checking for apptainer binary...
[2025-10-09 03:32:49] which: no apptainer in ((null))
[2025-10-09 03:32:49] apptainer is not installed, using version from CVMFS
[2025-10-09 03:32:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 03:32:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot72/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-10-09 03:32:49] apptainer works
[2025-10-09 03:32:49] Set ATHENA_PROC_NUMBER=4
[2025-10-09 03:32:49] Set ATHENA_CORE_NUMBER=4
[2025-10-09 03:32:49] Starting ATLAS job with PandaID=6831314879
[2025-10-09 03:32:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot72/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 05:54:03]  *** The last 200 lines of the pilot log: ***
[2025-10-09 05:54:03] 2025-10-09 03:45:47,132 | INFO     | monitor loop #556: job 0:6831314879 is in state 'finished'
[2025-10-09 05:54:03] 2025-10-09 03:45:47,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 05:54:03] 2025-10-09 03:45:48,323 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-09 05:54:03] 2025-10-09 03:45:48,343 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2754.2904531249997
[2025-10-09 05:54:03] 2025-10-09 03:45:48,366 | INFO     | using path: /scratch/boinc/var/slot72/slots/0/PanDA_Pilot-6831314879/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 05:54:03] 2025-10-09 03:45:48,367 | INFO     | extracted standard info from prmon json
[2025-10-09 05:54:03] 2025-10-09 03:45:48,367 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 05:54:03] 2025-10-09 03:45:48,367 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 05:54:03] 2025-10-09 03:45:48,368 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 05:54:03] 2025-10-09 03:45:48,368 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 05:54:03] 2025-10-09 03:45:48,370 | INFO     | fitting pss+swap vs Time
[2025-10-09 05:54:03] 2025-10-09 03:45:48,370 | INFO     | sum of square deviations: 681212772.5
[2025-10-09 05:54:03] 2025-10-09 03:45:48,371 | INFO     | sum of deviations: 15494339983.5
[2025-10-09 05:54:03] 2025-10-09 03:45:48,371 | INFO     | mean x: 1759977551.5
[2025-10-09 05:54:03] 2025-10-09 03:45:48,371 | INFO     | mean y: 2305779.869230769
[2025-10-09 05:54:03] 2025-10-09 03:45:48,371 | INFO     | -- intersect: -40028785308.14891
[2025-10-09 05:54:03] 2025-10-09 03:45:48,372 | INFO     | intersect: -40028785308.14891
[2025-10-09 05:54:03] 2025-10-09 03:45:48,372 | INFO     | chi2: 1.1976286024885892
[2025-10-09 05:54:03] 2025-10-09 03:45:48,372 | INFO     | sum of square deviations: 605592750.0
[2025-10-09 05:54:03] 2025-10-09 03:45:48,373 | INFO     | sum of deviations: 14842025412.0
[2025-10-09 05:54:03] 2025-10-09 03:45:48,373 | INFO     | mean x: 1759977399.0
[2025-10-09 05:54:03] 2025-10-09 03:45:48,373 | INFO     | mean y: 2304463.84
[2025-10-09 05:54:03] 2025-10-09 03:45:48,373 | INFO     | -- intersect: -43131681668.76093
[2025-10-09 05:54:03] 2025-10-09 03:45:48,373 | INFO     | intersect: -43131681668.76093
[2025-10-09 05:54:03] 2025-10-09 03:45:48,373 | INFO     | chi2: 1.1987916347283716
[2025-10-09 05:54:03] 2025-10-09 03:45:48,374 | INFO     | current chi2=1.1987916347283716 (change=-0.09711126115105502 %)
[2025-10-09 05:54:03] 2025-10-09 03:45:48,374 | INFO     | right removable region: 124
[2025-10-09 05:54:03] 2025-10-09 03:45:48,374 | INFO     | sum of square deviations: 605592750.0
[2025-10-09 05:54:03] 2025-10-09 03:45:48,374 | INFO     | sum of deviations: 150603022.00000012
[2025-10-09 05:54:03] 2025-10-09 03:45:48,375 | INFO     | mean x: 1759977704.0
[2025-10-09 05:54:03] 2025-10-09 03:45:48,375 | INFO     | mean y: 2336124.104
[2025-10-09 05:54:03] 2025-10-09 03:45:48,375 | INFO     | -- intersect: -435347386.5969153
[2025-10-09 05:54:03] 2025-10-09 03:45:48,375 | INFO     | intersect: -435347386.5969153
[2025-10-09 05:54:03] 2025-10-09 03:45:48,375 | INFO     | chi2: 0.002638220338063006
[2025-10-09 05:54:03] 2025-10-09 03:45:48,375 | INFO     | current chi2=0.002638220338063006 (change=99.7797129817557 %)
[2025-10-09 05:54:03] 2025-10-09 03:45:48,375 | INFO     | sum of square deviations: 535786790.0
[2025-10-09 05:54:03] 2025-10-09 03:45:48,376 | INFO     | sum of deviations: -257947253.5
[2025-10-09 05:54:03] 2025-10-09 03:45:48,376 | INFO     | mean x: 1759977856.5
[2025-10-09 05:54:03] 2025-10-09 03:45:48,376 | INFO     | mean y: 2337003.908333333
[2025-10-09 05:54:03] 2025-10-09 03:45:48,376 | INFO     | -- intersect: 849654374.8815746
[2025-10-09 05:54:03] 2025-10-09 03:45:48,376 | INFO     | intersect: 849654374.8815746
[2025-10-09 05:54:03] 2025-10-09 03:45:48,377 | INFO     | chi2: 0.0020064824950447955
[2025-10-09 05:54:03] 2025-10-09 03:45:48,377 | INFO     | current chi2=0.0020064824950447955 (change=23.94560582767835 %)
[2025-10-09 05:54:03] 2025-10-09 03:45:48,377 | INFO     | left removable region: 20
[2025-10-09 05:54:03] 2025-10-09 03:45:48,377 | INFO     | sum of square deviations: 348769330.0
[2025-10-09 05:54:03] 2025-10-09 03:45:48,377 | INFO     | sum of deviations: 97561142.99999996
[2025-10-09 05:54:03] 2025-10-09 03:45:48,377 | INFO     | mean x: 1759977978.5
[2025-10-09 05:54:03] 2025-10-09 03:45:48,377 | INFO     | mean y: 2335810.0576923075
[2025-10-09 05:54:03] 2025-10-09 03:45:48,378 | INFO     | -- intersect: -489982316.760653
[2025-10-09 05:54:03] 2025-10-09 03:45:48,378 | INFO     | intersect: -489982316.760653
[2025-10-09 05:54:03] 2025-10-09 03:45:48,378 | INFO     | chi2: 0.0016901124128986956
[2025-10-09 05:54:03] 2025-10-09 03:45:48,378 | INFO     | -- intersect: -489982316.760653
[2025-10-09 05:54:03] 2025-10-09 03:45:48,378 | INFO     | current memory leak: 0.28 B/s (using 104 data points, chi2=0.00)
[2025-10-09 05:54:03] 2025-10-09 03:45:48,378 | INFO     | could have reported an average CPU frequency of 2742 MHz (8 samples)
[2025-10-09 05:54:03] 2025-10-09 03:45:48,379 | INFO     | ..............................
[2025-10-09 05:54:03] 2025-10-09 03:45:48,379 | INFO     | . Timing measurements:
[2025-10-09 05:54:03] 2025-10-09 03:45:48,379 | INFO     | . get job = 0 s
[2025-10-09 05:54:03] 2025-10-09 03:45:48,379 | INFO     | . initial setup = 1 s
[2025-10-09 05:54:03] 2025-10-09 03:45:48,379 | INFO     | . payload setup = 8 s
[2025-10-09 05:54:03] 2025-10-09 03:45:48,379 | INFO     | . stage-in = 0 s
[2025-10-09 05:54:03] 2025-10-09 03:45:48,379 | INFO     | . payload execution = 7925 s
[2025-10-09 05:54:03] 2025-10-09 03:45:48,379 | INFO     | . stage-out = 0 s
[2025-10-09 05:54:03] 2025-10-09 03:45:48,379 | INFO     | . log creation = 0 s
[2025-10-09 05:54:03] 2025-10-09 03:45:48,379 | INFO     | ..............................
[2025-10-09 05:54:03] 2025-10-09 03:45:48,473 | INFO     | 
[2025-10-09 05:54:03] 2025-10-09 03:45:48,473 | INFO     | job summary report
[2025-10-09 05:54:03] 2025-10-09 03:45:48,473 | INFO     | --------------------------------------------------
[2025-10-09 05:54:03] 2025-10-09 03:45:48,473 | INFO     | PanDA job id: 6831314879
[2025-10-09 05:54:03] 2025-10-09 03:45:48,473 | INFO     | task id: 46376905
[2025-10-09 05:54:03] 2025-10-09 03:45:48,473 | INFO     | errors: (none)
[2025-10-09 05:54:03] 2025-10-09 03:45:48,473 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 05:54:03] 2025-10-09 03:45:48,473 | INFO     | pilot state: finished 
[2025-10-09 05:54:03] 2025-10-09 03:45:48,473 | INFO     | transexitcode: 0
[2025-10-09 05:54:03] 2025-10-09 03:45:48,473 | INFO     | exeerrorcode: 0
[2025-10-09 05:54:03] 2025-10-09 03:45:48,473 | INFO     | exeerrordiag: 
[2025-10-09 05:54:03] 2025-10-09 03:45:48,474 | INFO     | exitcode: 0
[2025-10-09 05:54:03] 2025-10-09 03:45:48,474 | INFO     | exitmsg: OK
[2025-10-09 05:54:03] 2025-10-09 03:45:48,474 | INFO     | cpuconsumptiontime: 30220 s
[2025-10-09 05:54:03] 2025-10-09 03:45:48,474 | INFO     | nevents: 400
[2025-10-09 05:54:03] 2025-10-09 03:45:48,474 | INFO     | neventsw: 0
[2025-10-09 05:54:03] 2025-10-09 03:45:48,474 | INFO     | pid: 1034068
[2025-10-09 05:54:03] 2025-10-09 03:45:48,474 | INFO     | pgrp: 1034068
[2025-10-09 05:54:03] 2025-10-09 03:45:48,474 | INFO     | corecount: 4
[2025-10-09 05:54:03] 2025-10-09 03:45:48,474 | INFO     | event service: False
[2025-10-09 05:54:03] 2025-10-09 03:45:48,474 | INFO     | sizes: {0: 2348600, 1: 2348855, 7: 2349117, 12: 2349145, 7937: 2377291, 7938: 2386495, 7947: 2386633}
[2025-10-09 05:54:03] 2025-10-09 03:45:48,474 | INFO     | --------------------------------------------------
[2025-10-09 05:54:03] 2025-10-09 03:45:48,474 | INFO     | 
[2025-10-09 05:54:03] 2025-10-09 03:45:48,475 | INFO     | executing command: ls -lF /scratch/boinc/var/slot72/slots/0
[2025-10-09 05:54:03] 2025-10-09 03:45:48,504 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 05:54:03] 2025-10-09 03:45:48,504 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 05:54:03] 2025-10-09 03:45:48,504 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 05:54:03] 2025-10-09 03:45:48,504 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 05:54:03] 2025-10-09 03:45:48,505 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 05:54:03] 2025-10-09 03:45:48,505 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 05:54:03] 2025-10-09 03:45:48,505 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 05:54:03] 2025-10-09 03:45:48,505 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 05:54:03] 2025-10-09 03:45:48,505 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 05:54:03] 2025-10-09 03:45:48,505 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 05:54:03] 2025-10-09 03:45:48,505 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 05:54:03] 2025-10-09 03:45:48,505 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 05:54:03] 2025-10-09 03:45:48,505 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 05:54:03] 2025-10-09 03:45:48,505 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 05:54:03] 2025-10-09 03:45:48,506 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 05:54:03] 2025-10-09 03:45:48,506 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 05:54:03] 2025-10-09 03:45:48,506 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 05:54:03] 2025-10-09 03:45:48,506 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 05:54:03] 2025-10-09 03:45:48,506 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 05:54:03] 2025-10-09 03:45:48,506 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 05:54:03] 2025-10-09 03:45:48,506 | INFO     | job 6831314879 has completed (purged errors)
[2025-10-09 05:54:03] 2025-10-09 03:45:48,506 | INFO     | overall cleanup function is called
[2025-10-09 05:54:03] 2025-10-09 03:45:49,515 | INFO     | --- collectZombieJob: --- 10, [1034068]
[2025-10-09 05:54:03] 2025-10-09 03:45:49,516 | INFO     | zombie collector waiting for pid 1034068
[2025-10-09 05:54:03] 2025-10-09 03:45:49,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 05:54:03] 2025-10-09 03:45:49,516 | INFO     | collected zombie processes
[2025-10-09 05:54:03] 2025-10-09 03:45:49,516 | INFO     | will attempt to kill all subprocesses of pid=1034068
[2025-10-09 05:54:03] 2025-10-09 03:45:50,243 | INFO     | process IDs to be killed: [1034068] (in reverse order)
[2025-10-09 05:54:03] 2025-10-09 03:45:50,503 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 05:54:03] 2025-10-09 03:45:50,504 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 05:54:03] 2025-10-09 03:45:50,535 | INFO     | did not find any defunct processes belonging to 1034068
[2025-10-09 05:54:03] 2025-10-09 03:45:50,565 | INFO     | did not find any defunct processes belonging to 1034068
[2025-10-09 05:54:03] 2025-10-09 03:45:50,565 | INFO     | ready for new job
[2025-10-09 05:54:03] 2025-10-09 03:45:50,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 05:54:03] 2025-10-09 03:45:50,568 | INFO     | ***************************************
[2025-10-09 05:54:03] 2025-10-09 03:45:50,568 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-09 05:54:03] 2025-10-09 03:45:50,568 | INFO     | ***************************************
[2025-10-09 05:54:03] 2025-10-09 03:45:50,568 | INFO     | 
[2025-10-09 05:54:03] 2025-10-09 03:45:50,576 | INFO     | architecture information:
[2025-10-09 05:54:03] 2025-10-09 03:45:50,577 | INFO     | executing command: cat /etc/os-release
[2025-10-09 05:54:03] 2025-10-09 03:45:50,600 | INFO     | cat /etc/os-release:
[2025-10-09 05:54:03] NAME="CentOS Linux"
[2025-10-09 05:54:03] VERSION="7 (Core)"
[2025-10-09 05:54:03] ID="centos"
[2025-10-09 05:54:03] ID_LIKE="rhel fedora"
[2025-10-09 05:54:03] VERSION_ID="7"
[2025-10-09 05:54:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 05:54:03] ANSI_COLOR="0;31"
[2025-10-09 05:54:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 05:54:03] HOME_URL="https://www.centos.org/"
[2025-10-09 05:54:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 05:54:03] 
[2025-10-09 05:54:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 05:54:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 05:54:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 05:54:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 05:54:03] 
[2025-10-09 05:54:03] 2025-10-09 03:45:50,601 | INFO     | ***************************************
[2025-10-09 05:54:03] 2025-10-09 03:45:51,104 | INFO     | executing command: df -mP /scratch/boinc/var/slot72/slots/0
[2025-10-09 05:54:03] 2025-10-09 03:45:51,131 | INFO     | sufficient remaining disk space (3344730947584 B)
[2025-10-09 05:54:03] 2025-10-09 03:45:51,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 05:54:03] 2025-10-09 03:45:51,131 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 05:54:03] 2025-10-09 03:45:51,131 | INFO     | update_server=False
[2025-10-09 05:54:03] 2025-10-09 03:45:51,132 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 05:54:03] 2025-10-09 03:45:51,132 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 05:54:03] 2025-10-09 03:45:51,132 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 05:54:03] 2025-10-09 03:45:51,132 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 05:54:03] 2025-10-09 03:45:51,133 | INFO     | aborting loop
[2025-10-09 05:54:03] 2025-10-09 03:45:51,295 | INFO     | all data control threads have been joined
[2025-10-09 05:54:03] 2025-10-09 03:45:52,137 | INFO     | [job] retrieve thread has finished
[2025-10-09 05:54:03] 2025-10-09 03:45:52,139 | INFO     | [job] job monitor thread has finished
[2025-10-09 05:54:03] 2025-10-09 03:45:52,142 | INFO     | all payload control threads have been joined
[2025-10-09 05:54:03] 2025-10-09 03:45:52,220 | INFO     | [payload] failed_post thread has finished
[2025-10-09 05:54:03] 2025-10-09 03:45:52,298 | INFO     | [data] control thread has finished
[2025-10-09 05:54:03] 2025-10-09 03:45:52,400 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 05:54:03] 2025-10-09 03:45:52,653 | INFO     | all job control threads have been joined
[2025-10-09 05:54:03] 2025-10-09 03:45:52,894 | INFO     | [data] copytool_in thread has finished
[2025-10-09 05:54:03] 2025-10-09 03:45:52,939 | INFO     | [payload] validate_post thread has finished
[2025-10-09 05:54:03] 2025-10-09 03:45:53,082 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 05:54:03] 2025-10-09 03:45:53,139 | INFO     | [data] copytool_out thread has finished
[2025-10-09 05:54:03] 2025-10-09 03:45:53,147 | INFO     | [payload] control thread has finished
[2025-10-09 05:54:03] 2025-10-09 03:45:53,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 05:54:03] 2025-10-09 03:45:53,497 | INFO     | [job] validate thread has finished
[2025-10-09 05:54:03] 2025-10-09 03:45:53,551 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 05:54:03] 2025-10-09 03:45:53,659 | INFO     | [job] control thread has finished
[2025-10-09 05:54:03] 2025-10-09 03:45:54,489 | INFO     | [job] queue monitor thread has finished
[2025-10-09 05:54:03] 2025-10-09 03:45:55,139 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 05:54:03] 2025-10-09 03:46:02,018 | INFO     | job.realtimelogging is not enabled
[2025-10-09 05:54:03] 2025-10-09 03:46:03,021 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 05:54:03] 2025-10-09 03:46:15,964 | INFO     | [monitor] cgroup control has ended
[2025-10-09 05:54:03] 2025-10-09 03:46:17,436 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22466771597120)>', '<ExcThread(monitor, started 22466522986240)>']
[2025-10-09 05:54:03] 2025-10-09 03:46:20,561 | INFO     | PID=1002875 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 05:54:03] 2025-10-09 03:46:20,563 | INFO     | .. there are 15 such processes running
[2025-10-09 05:54:03] 2025-10-09 03:46:20,563 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 05:54:03] 2025-10-09 03:46:20,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 05:54:03] 2025-10-09 03:46:20,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 05:54:03] 2025-10-09 03:46:20,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 05:54:03] 2025-10-09 03:46:20,564 | INFO     | [monitor] control thread has ended
[2025-10-09 05:54:03] 2025-10-09 03:46:22,462 | INFO     | all workflow threads have been joined
[2025-10-09 05:54:03] 2025-10-09 03:46:22,462 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 05:54:03] 2025-10-09 03:46:22,462 | INFO     | traces error code: 0
[2025-10-09 05:54:03] 2025-10-09 03:46:22,463 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 05:54:03] 2025-10-09 03:46:22,616 [wrapper] ==== pilot stdout END ====
[2025-10-09 05:54:03] 2025-10-09 03:46:22,620 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 05:54:03] 2025-10-09 03:46:22,623 [wrapper] pilotpid: 1002875
[2025-10-09 05:54:03] 2025-10-09 03:46:22,627 [wrapper] Pilot exit status: 0
[2025-10-09 05:54:03] 2025-10-09 03:46:22,640 [wrapper] pandaids: 6831314879
[2025-10-09 05:54:03] 2025-10-09 03:46:22,787 [wrapper] cleanup supervisor_pilot 1588873 1002877
[2025-10-09 05:54:03] 2025-10-09 03:46:22,791 [wrapper] Test setup, not cleaning
[2025-10-09 05:54:03] 2025-10-09 03:46:22,795 [wrapper] apfmon messages muted
[2025-10-09 05:54:03] 2025-10-09 03:46:22,799 [wrapper] ==== wrapper stdout END ====
[2025-10-09 05:54:03] 2025-10-09 03:46:22,803 [wrapper] ==== wrapper stderr END ====
[2025-10-09 05:54:03]  *** Error codes and diagnostics ***
[2025-10-09 05:54:03]     "exeErrorCode": 0,
[2025-10-09 05:54:03]     "exeErrorDiag": "",
[2025-10-09 05:54:03]     "pilotErrorCode": 0,
[2025-10-09 05:54:03]     "pilotErrorDiag": "",
[2025-10-09 05:54:03]  *** Listing of results directory ***
[2025-10-09 05:54:03] total 392896
[2025-10-09 05:54:03] -rw-r--r-- 1 boinc boinc    552446 Oct  5 13:00 pilot3.tar.gz
[2025-10-09 05:54:03] -rw-r--r-- 1 boinc boinc      5112 Oct  5 13:19 queuedata.json
[2025-10-09 05:54:03] -rwx------ 1 boinc boinc     36292 Oct  5 13:20 runpilot2-wrapper.sh
[2025-10-09 05:54:03] -rw-r--r-- 1 boinc boinc       100 Oct  9 03:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 05:54:03] -rwxr-xr-x 1 boinc boinc      7986 Oct  9 03:32 run_atlas
[2025-10-09 05:54:03] -rw-r--r-- 1 boinc boinc       105 Oct  9 03:32 job.xml
[2025-10-09 05:54:03] -rw-r--r-- 1 boinc boinc      6684 Oct  9 03:32 init_data.xml
[2025-10-09 05:54:03] -rw-r--r-- 2 boinc boinc 212784726 Oct  9 03:32 EVNT.46376901._003038.pool.root.1
[2025-10-09 05:54:03] drwxrwx--x 2 boinc boinc      4096 Oct  9 03:32 shared
[2025-10-09 05:54:03] -rw-r--r-- 2 boinc boinc    565604 Oct  9 03:32 input.tar.gz
[2025-10-09 05:54:03] -rw-r--r-- 2 boinc boinc     15120 Oct  9 03:32 start_atlas.sh
[2025-10-09 05:54:03] -rw-r--r-- 1 boinc boinc         0 Oct  9 03:32 boinc_lockfile
[2025-10-09 05:54:03] -rw-r--r-- 1 boinc boinc      2519 Oct  9 03:32 pandaJob.out
[2025-10-09 05:54:03] -rw------- 1 boinc boinc    979290 Oct  9 03:33 agis_schedconf.cvmfs.json
[2025-10-09 05:54:03] -rw------- 1 boinc boinc   1560401 Oct  9 03:33 agis_ddmendpoints.agis.ALL.json
[2025-10-09 05:54:03] drwx------ 4 boinc boinc      4096 Oct  9 03:33 pilot3
[2025-10-09 05:54:03] -rw------- 1 boinc boinc 182774774 Oct  9 05:45 HITS.46376905._082822.pool.root.1
[2025-10-09 05:54:03] -rw-r--r-- 1 boinc boinc       529 Oct  9 05:45 boinc_task_state.xml
[2025-10-09 05:54:03] -rw------- 1 boinc boinc        95 Oct  9 05:45 pilot_heartbeat.json
[2025-10-09 05:54:03] -rw------- 1 boinc boinc      1026 Oct  9 05:45 memory_monitor_summary.json
[2025-10-09 05:54:03] -rw------- 1 boinc boinc    308381 Oct  9 05:45 log.46376905._082822.job.log.tgz.1
[2025-10-09 05:54:03] -rw------- 1 boinc boinc      7779 Oct  9 05:45 heartbeat.json
[2025-10-09 05:54:03] -rw------- 1 boinc boinc      4907 Oct  9 05:46 pilotlog.txt
[2025-10-09 05:54:03] -rw------- 1 boinc boinc   1126582 Oct  9 05:46 log.46376905._082822.job.log.1
[2025-10-09 05:54:03] -rw------- 1 boinc boinc       357 Oct  9 05:46 output.list
[2025-10-09 05:54:03] -rw-r--r-- 1 boinc boinc       620 Oct  9 05:46 runtime_log
[2025-10-09 05:54:03] -rw------- 1 boinc boinc   1454080 Oct  9 05:46 result.tar.gz
[2025-10-09 05:54:03] -rw-r--r-- 1 boinc boinc      9069 Oct  9 05:46 runtime_log.err
[2025-10-09 05:54:03] -rw------- 1 boinc boinc       662 Oct  9 05:46 AeRMDm0xbP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmw3ONDm6fcmxn.diag
[2025-10-09 05:54:03] -rw-r--r-- 1 boinc boinc        26 Oct  9 05:53 wrapper_checkpoint.txt
[2025-10-09 05:54:03] -rw-r--r-- 1 boinc boinc      8192 Oct  9 05:54 boinc_mmap_file
[2025-10-09 05:54:03] -rw-r--r-- 1 boinc boinc     20860 Oct  9 05:54 stderr.txt
[2025-10-09 05:54:04] HITS file was successfully produced:
[2025-10-09 05:54:04] -rw------- 1 boinc boinc 182774774 Oct  9 05:45 shared/HITS.pool.root.1
[2025-10-09 05:54:04]  *** Contents of shared directory: ***
[2025-10-09 05:54:04] total 388292
[2025-10-09 05:54:04] -rw-r--r-- 2 boinc boinc 212784726 Oct  9 03:32 ATLAS.root_0
[2025-10-09 05:54:04] -rw-r--r-- 2 boinc boinc    565604 Oct  9 03:32 input.tar.gz
[2025-10-09 05:54:04] -rw-r--r-- 2 boinc boinc     15120 Oct  9 03:32 start_atlas.sh
[2025-10-09 05:54:04] -rw------- 1 boinc boinc 182774774 Oct  9 05:45 HITS.pool.root.1
[2025-10-09 05:54:04] -rw------- 1 boinc boinc   1454080 Oct  9 05:46 result.tar.gz
05:54:05 (988550): run_atlas exited; CPU time 30667.209086
05:54:05 (988550): called boinc_finish(0)

</stderr_txt>
]]>

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