Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:33:10 (1798816): wrapper (7.7.26015): starting
05:33:10 (1798816): wrapper: running run_atlas (--nthreads 12)
[2025-10-05 05:33:10] Arguments: --nthreads 12
[2025-10-05 05:33:10] Threads: 12
[2025-10-05 05:33:10] Checking for CVMFS
[2025-10-05 05:33:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-05 05:33:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-05 05:33:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-05 05:33:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-05 05:33:11] 2.11.5.0 2129 22102 199804 151363 3 407 41240244 45568001 18903 130560 0 207896715 99.823 107754643 26178 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-05 05:33:11] CVMFS is ok
[2025-10-05 05:33:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-05 05:33:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-05 05:33:11] Further information can be found at the LHC@home message board.
[2025-10-05 05:33:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-05 05:33:11] Checking for apptainer binary...
[2025-10-05 05:33:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-05 05:33:11] Running /usr/bin/apptainer --version
[2025-10-05 05:33:11] apptainer version 1.4.1-1.el9
[2025-10-05 05:33:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-05 05:33:11] wns0037.triumf.lcg
[2025-10-05 05:33:11] apptainer works
[2025-10-05 05:33:11] Set ATHENA_PROC_NUMBER=12
[2025-10-05 05:33:11] Set ATHENA_CORE_NUMBER=12
[2025-10-05 05:33:11] Starting ATLAS job with PandaID=6831313689
[2025-10-05 05:33:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-05 05:37:39]  *** The last 200 lines of the pilot log: ***
[2025-10-05 05:37:39] 2025-10-05 12:36:54,952 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-05 05:37:39] 2025-10-05 12:36:54,953 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 05:37:39] 2025-10-05 12:36:54,953 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 05:37:39] 2025-10-05 12:36:54,953 | WARNING  | wrong length of table data, x=[1759667657.0], y=[1310.0] (must be same and length>=4)
[2025-10-05 05:37:39] 2025-10-05 12:36:54,953 | INFO     | could have reported an average CPU frequency of 2722 MHz (4 samples)
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | ..............................
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . Timing measurements:
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . get job = 0 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . initial setup = 3 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . payload setup = 11 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . stage-in = 0 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . payload execution = 35 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . stage-out = 0 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . log creation = 0 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | ..............................
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6831313689/pilotlog.txt
[2025-10-05 05:37:39] 2025-10-05 12:36:54,978 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-05 05:37:39] - Log from pilotlog.txt -
[2025-10-05 05:37:39] 2025-10-05 12:36:54,951 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6831313689/memory_monitor_summary.json (trf name=prmon)
[2025-10-05 05:37:39] 2025-10-05 12:36:54,952 | INFO     | extracted standard info from prmon json
[2025-10-05 05:37:39] 2025-10-05 12:36:54,952 | INFO     | extracted standard memory fields from prmon json
[2025-10-05 05:37:39] 2025-10-05 12:36:54,952 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-05 05:37:39] 2025-10-05 12:36:54,953 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 05:37:39] 2025-10-05 12:36:54,953 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 05:37:39] 2025-10-05 12:36:54,953 | WARNING  | wrong length of table data, x=[1759667657.0], y=[1310.0] (must be same and length>=4)
[2025-10-05 05:37:39] 2025-10-05 12:36:54,953 | INFO     | could have reported an average CPU frequency of 2722 MHz (4 samples)
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | ..............................
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . Timing measurements:
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . get job = 0 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . initial setup = 3 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . payload setup = 11 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . stage-in = 0 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . payload execution = 35 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . stage-out = 0 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . log creation = 0 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | ..............................
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6831313689/pilotlog.txt
[2025-10-05 05:37:39] 2025-10-05 12:36:54,978 | WARNING  | 
[2025-10-05 05:37:39] [begin log extracts]
[2025-10-05 05:37:39] - Log from pilotlog.txt -
[2025-10-05 05:37:39] 2025-10-05 12:36:54,951 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6831313689/memory_monitor_summary.json (trf name=prmon)
[2025-10-05 05:37:39] 2025-10-05 12:36:54,952 | INFO     | extracted standard info from prmon json
[2025-10-05 05:37:39] 2025-10-05 12:36:54,952 | INFO     | extracted standard memory fields from prmon json
[2025-10-05 05:37:39] 2025-10-05 12:36:54,952 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-05 05:37:39] 2025-10-05 12:36:54,953 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 05:37:39] 2025-10-05 12:36:54,953 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 05:37:39] 2025-10-05 12:36:54,953 | WARNING  | wrong length of table data, x=[1759667657.0], y=[1310.0] (must be same and length>=4)
[2025-10-05 05:37:39] 2025-10-05 12:36:54,953 | INFO     | could have reported an average CPU frequency of 2722 MHz (4 samples)
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | ..............................
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . Timing measurements:
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . get job = 0 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . initial setup = 3 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . payload setup = 11 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . stage-in = 0 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . payload execution = 35 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . stage-out = 0 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | . log creation = 0 s
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | ..............................
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-05 05:37:39] 2025-10-05 12:36:54,954 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6831313689/pilotlog.txt
[2025-10-05 05:37:39] [end log extracts]
[2025-10-05 05:37:39] 2025-10-05 12:36:54,979 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-05 05:37:39] 2025-10-05 12:36:54,980 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-05 05:37:39] 2025-10-05 12:36:55,039 | INFO     | 
[2025-10-05 05:37:39] 2025-10-05 12:36:55,039 | INFO     | job summary report
[2025-10-05 05:37:39] 2025-10-05 12:36:55,039 | INFO     | --------------------------------------------------
[2025-10-05 05:37:39] 2025-10-05 12:36:55,039 | INFO     | PanDA job id: 6831313689
[2025-10-05 05:37:39] 2025-10-05 12:36:55,039 | INFO     | task id: 46376905
[2025-10-05 05:37:39] 2025-10-05 12:36:55,039 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-05 05:34:35,770 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-05 05:37:39] 2025-10-05 12:36:55,039 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-05 05:37:39] 2025-10-05 12:36:55,039 | INFO     | pilot state: failed 
[2025-10-05 05:37:39] 2025-10-05 12:36:55,039 | INFO     | transexitcode: 65
[2025-10-05 05:37:39] 2025-10-05 12:36:55,039 | INFO     | exeerrorcode: 65
[2025-10-05 05:37:39] 2025-10-05 12:36:55,039 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-05 05:37:39] 2025-10-05 12:36:55,039 | INFO     | exitcode: 65
[2025-10-05 05:37:39] 2025-10-05 12:36:55,039 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-05 05:37:39] 2025-10-05 12:36:55,039 | INFO     | cpuconsumptiontime: 16 s
[2025-10-05 05:37:39] 2025-10-05 12:36:55,039 | INFO     | nevents: 0
[2025-10-05 05:37:39] 2025-10-05 12:36:55,039 | INFO     | neventsw: 0
[2025-10-05 05:37:39] 2025-10-05 12:36:55,039 | INFO     | pid: 1809080
[2025-10-05 05:37:39] 2025-10-05 12:36:55,039 | INFO     | pgrp: 1809080
[2025-10-05 05:37:39] 2025-10-05 12:36:55,040 | INFO     | corecount: 12
[2025-10-05 05:37:39] 2025-10-05 12:36:55,040 | INFO     | event service: False
[2025-10-05 05:37:39] 2025-10-05 12:36:55,040 | INFO     | sizes: {0: 2348641, 1: 2348840, 9: 2349102, 11: 2349130, 50: 2372387, 51: 2376739, 53: 2376895, 181: 2377061}
[2025-10-05 05:37:39] 2025-10-05 12:36:55,040 | INFO     | --------------------------------------------------
[2025-10-05 05:37:39] 2025-10-05 12:36:55,040 | INFO     | 
[2025-10-05 05:37:39] 2025-10-05 12:36:55,040 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-05 05:37:39] 2025-10-05 12:36:55,098 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-05 05:37:39] 2025-10-05 12:36:55,098 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-05 05:37:39] 2025-10-05 12:36:55,098 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-05 05:37:39] 2025-10-05 12:36:55,099 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-05 05:37:39] 2025-10-05 12:36:55,099 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-05 05:37:39] 2025-10-05 12:36:55,099 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-05 05:37:39] 2025-10-05 12:36:55,099 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-05 05:37:39] 2025-10-05 12:36:55,099 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-05 05:37:39] 2025-10-05 12:36:55,099 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-05 05:37:39] 2025-10-05 12:36:55,099 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-05 05:37:39] 2025-10-05 12:36:55,099 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-05 05:37:39] 2025-10-05 12:36:55,099 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-05 05:37:39] 2025-10-05 12:36:55,099 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-05 05:37:39] 2025-10-05 12:36:55,099 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-05 05:37:39] 2025-10-05 12:36:55,099 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-05 05:37:39] 2025-10-05 12:36:55,099 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-05 05:37:39] 2025-10-05 12:36:55,099 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-05 05:37:39] 2025-10-05 12:36:55,099 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-05 05:37:39] 2025-10-05 12:36:55,099 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-05 05:37:39] 2025-10-05 12:36:55,099 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-05 05:37:39] 2025-10-05 12:36:55,099 | INFO     | job 6831313689 has completed (purged errors)
[2025-10-05 05:37:39] 2025-10-05 12:36:55,100 | INFO     | overall cleanup function is called
[2025-10-05 05:37:39] 2025-10-05 12:36:56,107 | INFO     | --- collectZombieJob: --- 10, [1809080]
[2025-10-05 05:37:39] 2025-10-05 12:36:56,107 | INFO     | zombie collector waiting for pid 1809080
[2025-10-05 05:37:39] 2025-10-05 12:36:56,107 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-05 05:37:39] 2025-10-05 12:36:56,107 | INFO     | collected zombie processes
[2025-10-05 05:37:39] 2025-10-05 12:36:56,107 | INFO     | will attempt to kill all subprocesses of pid=1809080
[2025-10-05 05:37:39] 2025-10-05 12:36:56,395 | INFO     | process IDs to be killed: [1809080] (in reverse order)
[2025-10-05 05:37:39] 2025-10-05 12:36:56,461 | WARNING  | found no corresponding commands to process id(s)
[2025-10-05 05:37:39] 2025-10-05 12:36:56,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-05 05:37:39] 2025-10-05 12:36:56,493 | INFO     | did not find any defunct processes belonging to 1809080
[2025-10-05 05:37:39] 2025-10-05 12:36:56,534 | INFO     | did not find any defunct processes belonging to 1809080
[2025-10-05 05:37:39] 2025-10-05 12:36:56,535 | INFO     | ready for new job
[2025-10-05 05:37:39] 2025-10-05 12:36:56,535 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-05 05:37:39] 2025-10-05 12:36:56,550 | INFO     | ***************************************
[2025-10-05 05:37:39] 2025-10-05 12:36:56,550 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-05 05:37:39] 2025-10-05 12:36:56,550 | INFO     | ***************************************
[2025-10-05 05:37:39] 2025-10-05 12:36:56,550 | INFO     | 
[2025-10-05 05:37:39] 2025-10-05 12:36:56,563 | INFO     | architecture information:
[2025-10-05 05:37:39] 2025-10-05 12:36:56,569 | INFO     | executing command: cat /etc/os-release
[2025-10-05 05:37:39] 2025-10-05 12:36:56,612 | INFO     | cat /etc/os-release:
[2025-10-05 05:37:39] NAME="CentOS Linux"
[2025-10-05 05:37:39] VERSION="7 (Core)"
[2025-10-05 05:37:39] ID="centos"
[2025-10-05 05:37:39] ID_LIKE="rhel fedora"
[2025-10-05 05:37:39] VERSION_ID="7"
[2025-10-05 05:37:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-05 05:37:39] ANSI_COLOR="0;31"
[2025-10-05 05:37:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-05 05:37:39] HOME_URL="https://www.centos.org/"
[2025-10-05 05:37:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-05 05:37:39] 
[2025-10-05 05:37:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-05 05:37:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-05 05:37:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-05 05:37:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-05 05:37:39] 
[2025-10-05 05:37:39] 2025-10-05 12:36:56,612 | INFO     | ***************************************
[2025-10-05 05:37:39] 2025-10-05 12:36:57,119 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-05 05:37:39] 2025-10-05 12:36:57,217 | INFO     | sufficient remaining disk space (1987519184896 B)
[2025-10-05 05:37:39] 2025-10-05 12:36:57,218 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-05 05:37:39] 2025-10-05 12:36:57,218 | INFO     | current server update state: UPDATING_FINAL
[2025-10-05 05:37:39] 2025-10-05 12:36:57,218 | INFO     | update_server=False
[2025-10-05 05:37:39] 2025-10-05 12:36:57,218 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-05 05:37:39] 2025-10-05 12:36:57,218 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-05 05:37:39] 2025-10-05 12:36:57,219 | INFO     | aborting loop
[2025-10-05 05:37:39] 2025-10-05 12:36:57,241 | INFO     | all data control threads have been joined
[2025-10-05 05:37:39] 2025-10-05 12:36:57,909 | INFO     | all payload control threads have been joined
[2025-10-05 05:37:39] 2025-10-05 12:36:57,996 | INFO     | all job control threads have been joined
[2025-10-05 05:37:39] 2025-10-05 12:36:58,224 | INFO     | [job] job monitor thread has finished
[2025-10-05 05:37:39] 2025-10-05 12:36:58,227 | INFO     | [job] retrieve thread has finished
[2025-10-05 05:37:39] 2025-10-05 12:36:58,247 | INFO     | [data] control thread has finished
[2025-10-05 05:37:39] 2025-10-05 12:36:58,537 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-05 05:37:39] 2025-10-05 12:36:58,605 | INFO     | [payload] execute_payloads thread has finished
[2025-10-05 05:37:39] 2025-10-05 12:36:58,915 | INFO     | [payload] control thread has finished
[2025-10-05 05:37:39] 2025-10-05 12:36:59,002 | INFO     | [job] control thread has finished
[2025-10-05 05:37:39] 2025-10-05 12:36:59,005 | INFO     | [job] validate thread has finished
[2025-10-05 05:37:39] 2025-10-05 12:36:59,062 | INFO     | [data] copytool_in thread has finished
[2025-10-05 05:37:39] 2025-10-05 12:36:59,148 | INFO     | [job] create_data_payload thread has finished
[2025-10-05 05:37:39] 2025-10-05 12:36:59,190 | INFO     | [payload] validate_post thread has finished
[2025-10-05 05:37:39] 2025-10-05 12:36:59,348 | INFO     | [payload] validate_pre thread has finished
[2025-10-05 05:37:39] 2025-10-05 12:36:59,466 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-05 05:37:39] 2025-10-05 12:36:59,468 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-05 05:37:39] 2025-10-05 12:36:59,678 | INFO     | [payload] failed_post thread has finished
[2025-10-05 05:37:39] 2025-10-05 12:37:00,054 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-05 05:37:39] 2025-10-05 12:37:00,544 | INFO     | [data] copytool_out thread has finished
[2025-10-05 05:37:39] 2025-10-05 12:37:01,060 | INFO     | [job] queue monitor thread has finished
[2025-10-05 05:37:39] 2025-10-05 12:37:03,477 | INFO     | [data] queue_monitor thread has finished
[2025-10-05 05:37:39] 2025-10-05 12:37:27,107 | INFO     | PID=1802512 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-05 05:37:39] 2025-10-05 12:37:27,107 | INFO     | .. there are 28 such processes running
[2025-10-05 05:37:39] 2025-10-05 12:37:27,107 | INFO     | found 0 job(s) in 20 queues
[2025-10-05 05:37:39] 2025-10-05 12:37:27,107 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-05 05:37:39] 2025-10-05 12:37:27,108 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-05 05:37:39] 2025-10-05 12:37:32,655 | INFO     | [monitor] cgroup control has ended
[2025-10-05 05:37:39] 2025-10-05 12:37:33,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140596477441856)>', '<ExcThread(monitor, started 140595938973440)>']
[2025-10-05 05:37:39] 2025-10-05 12:37:34,148 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-05 05:37:39] 2025-10-05 12:37:34,148 | INFO     | [monitor] control thread has ended
[2025-10-05 05:37:39] 2025-10-05 12:37:38,551 | INFO     | all workflow threads have been joined
[2025-10-05 05:37:39] 2025-10-05 12:37:38,551 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-05 05:37:39] 2025-10-05 12:37:38,552 | INFO     | traces error code: 0
[2025-10-05 05:37:39] 2025-10-05 12:37:38,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-05 05:37:39] 2025-10-05 12:37:38,753 [wrapper] ==== pilot stdout END ====
[2025-10-05 05:37:39] 2025-10-05 12:37:38,755 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-05 05:37:39] 2025-10-05 12:37:38,757 [wrapper] pilotpid: 1802512
[2025-10-05 05:37:39] 2025-10-05 12:37:38,758 [wrapper] Pilot exit status: 0
[2025-10-05 05:37:39] 2025-10-05 12:37:38,767 [wrapper] pandaids: 6831313689
[2025-10-05 05:37:39] 2025-10-05 12:37:38,829 [wrapper] cleanup supervisor_pilot 1802518 1802513
[2025-10-05 05:37:39] 2025-10-05 12:37:38,832 [wrapper] Test setup, not cleaning
[2025-10-05 05:37:39] 2025-10-05 12:37:38,834 [wrapper] apfmon messages muted
[2025-10-05 05:37:39] 2025-10-05 12:37:38,836 [wrapper] ==== wrapper stdout END ====
[2025-10-05 05:37:39] 2025-10-05 12:37:38,837 [wrapper] ==== wrapper stderr END ====
[2025-10-05 05:37:39]  *** Error codes and diagnostics ***
[2025-10-05 05:37:39]     "exeErrorCode": 65,
[2025-10-05 05:37:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-05 05:37:39]     "pilotErrorCode": 1305,
[2025-10-05 05:37:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-05 05:37:39]  *** Listing of results directory ***
[2025-10-05 05:37:39] total 211768
[2025-10-05 05:37:39] -rw-r--r--. 1 boinc boinc    552446 Oct  5 03:50 pilot3.tar.gz
[2025-10-05 05:37:39] -rwx------. 1 boinc boinc     36292 Oct  5 03:51 runpilot2-wrapper.sh
[2025-10-05 05:37:39] -rw-r--r--. 1 boinc boinc      5112 Oct  5 03:51 queuedata.json
[2025-10-05 05:37:39] -rw-r--r--. 1 boinc boinc       100 Oct  5 05:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-05 05:37:39] -rwxr-xr-x. 1 boinc boinc      7986 Oct  5 05:33 run_atlas
[2025-10-05 05:37:39] -rw-r--r--. 1 boinc boinc       105 Oct  5 05:33 job.xml
[2025-10-05 05:37:39] -rw-r--r--. 1 boinc boinc      6594 Oct  5 05:33 init_data.xml
[2025-10-05 05:37:39] -rw-r--r--. 2 boinc boinc 212740783 Oct  5 05:33 EVNT.46376901._003013.pool.root.1
[2025-10-05 05:37:39] -rw-r--r--. 2 boinc boinc     15120 Oct  5 05:33 start_atlas.sh
[2025-10-05 05:37:39] drwxrwx--x. 2 boinc boinc      4096 Oct  5 05:33 shared
[2025-10-05 05:37:39] -rw-r--r--. 2 boinc boinc    565600 Oct  5 05:33 input.tar.gz
[2025-10-05 05:37:39] -rw-r--r--. 1 boinc boinc         0 Oct  5 05:33 boinc_lockfile
[2025-10-05 05:37:39] -rw-r--r--. 1 boinc boinc      2518 Oct  5 05:33 pandaJob.out
[2025-10-05 05:37:39] -rw-------. 1 boinc boinc    973974 Oct  5 05:33 agis_schedconf.cvmfs.json
[2025-10-05 05:37:39] -rw-------. 1 boinc boinc   1560401 Oct  5 05:33 agis_ddmendpoints.agis.ALL.json
[2025-10-05 05:37:39] drwx------. 4 boinc boinc      4096 Oct  5 05:33 pilot3
[2025-10-05 05:37:39] -rw-------. 1 boinc boinc       964 Oct  5 05:34 memory_monitor_summary.json
[2025-10-05 05:37:39] -rw-------. 1 boinc boinc     21247 Oct  5 05:34 log.46376905._082207.job.log.tgz.1
[2025-10-05 05:37:39] -rw-------. 1 boinc boinc        95 Oct  5 05:36 pilot_heartbeat.json
[2025-10-05 05:37:39] -rw-------. 1 boinc boinc      8371 Oct  5 05:36 heartbeat.json
[2025-10-05 05:37:39] -rw-r--r--. 1 boinc boinc      8192 Oct  5 05:37 boinc_mmap_file
[2025-10-05 05:37:39] -rw-r--r--. 1 boinc boinc        22 Oct  5 05:37 wrapper_checkpoint.txt
[2025-10-05 05:37:39] -rw-r--r--. 1 boinc boinc       523 Oct  5 05:37 boinc_task_state.xml
[2025-10-05 05:37:39] -rw-------. 1 boinc boinc      4823 Oct  5 05:37 pilotlog.txt
[2025-10-05 05:37:39] -rw-------. 1 boinc boinc     88408 Oct  5 05:37 log.46376905._082207.job.log.1
[2025-10-05 05:37:39] -rw-------. 1 boinc boinc       188 Oct  5 05:37 output.list
[2025-10-05 05:37:39] -rw-r--r--. 1 boinc boinc       620 Oct  5 05:37 runtime_log
[2025-10-05 05:37:39] -rw-------. 1 boinc boinc    133120 Oct  5 05:37 result.tar.gz
[2025-10-05 05:37:39] -rw-r--r--. 1 boinc boinc      8528 Oct  5 05:37 runtime_log.err
[2025-10-05 05:37:39] -rw-------. 1 boinc boinc       644 Oct  5 05:37 pWeLDmRWbP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmOyFMDmF3c0Sm.diag
[2025-10-05 05:37:39] -rw-r--r--. 1 boinc boinc     21333 Oct  5 05:37 stderr.txt
[2025-10-05 05:37:39] No HITS result produced
[2025-10-05 05:37:39]  *** Contents of shared directory: ***
[2025-10-05 05:37:39] total 208464
[2025-10-05 05:37:39] -rw-r--r--. 2 boinc boinc 212740783 Oct  5 05:33 ATLAS.root_0
[2025-10-05 05:37:39] -rw-r--r--. 2 boinc boinc     15120 Oct  5 05:33 start_atlas.sh
[2025-10-05 05:37:39] -rw-r--r--. 2 boinc boinc    565600 Oct  5 05:33 input.tar.gz
[2025-10-05 05:37:39] -rw-------. 1 boinc boinc    133120 Oct  5 05:37 result.tar.gz
05:37:40 (1798816): run_atlas exited; CPU time 24.204916
05:37:40 (1798816): called boinc_finish(0)

</stderr_txt>
]]>

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