Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:29:21 (2697727): wrapper (7.7.26015): starting
05:29:21 (2697727): wrapper: running run_atlas (--nthreads 8)
[2025-10-05 05:29:21] Arguments: --nthreads 8
[2025-10-05 05:29:21] Threads: 8
[2025-10-05 05:29:21] Checking for CVMFS
[2025-10-05 05:29:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-05 05:29:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-05 05:29:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-05 05:29:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-05 05:29:22] 2.11.3.0 2241 21048 151308 151363 2 262 36165626 45568000 14918 130560 0 117140553 99.859 47493501 24706 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-05 05:29:22] CVMFS is ok
[2025-10-05 05:29:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-05 05:29:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-05 05:29:22] Further information can be found at the LHC@home message board.
[2025-10-05 05:29:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-05 05:29:22] Checking for apptainer binary...
[2025-10-05 05:29:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-05 05:29:22] Running /usr/bin/apptainer --version
[2025-10-05 05:29:22] apptainer version 1.4.1-1.el9
[2025-10-05 05:29:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-05 05:29:23] wns0006.triumf.lcg
[2025-10-05 05:29:23] apptainer works
[2025-10-05 05:29:23] Set ATHENA_PROC_NUMBER=8
[2025-10-05 05:29:23] Set ATHENA_CORE_NUMBER=8
[2025-10-05 05:29:23] Starting ATLAS job with PandaID=6831313644
[2025-10-05 05:29:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-05 05:34:09]  *** The last 200 lines of the pilot log: ***
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | WARNING  | wrong length of table data, x=[1759667449.0], y=[2029.0] (must be same and length>=4)
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | ..............................
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | . Timing measurements:
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | . get job = 0 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | . initial setup = 5 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | . payload setup = 14 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | . stage-in = 0 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,028 | INFO     | . payload execution = 41 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,028 | INFO     | . stage-out = 0 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,028 | INFO     | . log creation = 0 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,028 | INFO     | ..............................
[2025-10-05 05:34:09] 2025-10-05 12:33:35,028 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-05 05:34:09] 2025-10-05 12:33:35,028 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6831313644/pilotlog.txt
[2025-10-05 05:34:09] 2025-10-05 12:33:35,104 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-05 05:34:09] - Log from pilotlog.txt -
[2025-10-05 05:34:09] 2025-10-05 12:33:35,024 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6831313644/memory_monitor_summary.json (trf name=prmon)
[2025-10-05 05:34:09] 2025-10-05 12:33:35,025 | INFO     | extracted standard info from prmon json
[2025-10-05 05:34:09] 2025-10-05 12:33:35,026 | INFO     | extracted standard memory fields from prmon json
[2025-10-05 05:34:09] 2025-10-05 12:33:35,026 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-05 05:34:09] 2025-10-05 12:33:35,026 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 05:34:09] 2025-10-05 12:33:35,026 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | WARNING  | wrong length of table data, x=[1759667449.0], y=[2029.0] (must be same and length>=4)
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | ..............................
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | . Timing measurements:
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | . get job = 0 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | . initial setup = 5 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | . payload setup = 14 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | . stage-in = 0 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,028 | INFO     | . payload execution = 41 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,028 | INFO     | . stage-out = 0 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,028 | INFO     | . log creation = 0 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,028 | INFO     | ..............................
[2025-10-05 05:34:09] 2025-10-05 12:33:35,028 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-05 05:34:09] 2025-10-05 12:33:35,028 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6831313644/pilotlog.txt
[2025-10-05 05:34:09] 2025-10-05 12:33:35,105 | WARNING  | 
[2025-10-05 05:34:09] [begin log extracts]
[2025-10-05 05:34:09] - Log from pilotlog.txt -
[2025-10-05 05:34:09] 2025-10-05 12:33:35,024 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6831313644/memory_monitor_summary.json (trf name=prmon)
[2025-10-05 05:34:09] 2025-10-05 12:33:35,025 | INFO     | extracted standard info from prmon json
[2025-10-05 05:34:09] 2025-10-05 12:33:35,026 | INFO     | extracted standard memory fields from prmon json
[2025-10-05 05:34:09] 2025-10-05 12:33:35,026 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-05 05:34:09] 2025-10-05 12:33:35,026 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 05:34:09] 2025-10-05 12:33:35,026 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | WARNING  | wrong length of table data, x=[1759667449.0], y=[2029.0] (must be same and length>=4)
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | ..............................
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | . Timing measurements:
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | . get job = 0 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | . initial setup = 5 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | . payload setup = 14 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,027 | INFO     | . stage-in = 0 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,028 | INFO     | . payload execution = 41 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,028 | INFO     | . stage-out = 0 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,028 | INFO     | . log creation = 0 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,028 | INFO     | ..............................
[2025-10-05 05:34:09] 2025-10-05 12:33:35,028 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-05 05:34:09] 2025-10-05 12:33:35,028 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6831313644/pilotlog.txt
[2025-10-05 05:34:09] [end log extracts]
[2025-10-05 05:34:09] 2025-10-05 12:33:35,105 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-05 05:34:09] 2025-10-05 12:33:35,106 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-05 05:34:09] 2025-10-05 12:33:35,537 | INFO     | time since job start (224s) is within the limit (172800.0s)
[2025-10-05 05:34:09] 2025-10-05 12:33:35,976 | INFO     | 
[2025-10-05 05:34:09] 2025-10-05 12:33:35,976 | INFO     | job summary report
[2025-10-05 05:34:09] 2025-10-05 12:33:35,976 | INFO     | --------------------------------------------------
[2025-10-05 05:34:09] 2025-10-05 12:33:35,976 | INFO     | PanDA job id: 6831313644
[2025-10-05 05:34:09] 2025-10-05 12:33:35,976 | INFO     | task id: 46376905
[2025-10-05 05:34:09] 2025-10-05 12:33:35,977 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-05 05:31:14,620 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-05 05:34:09] 2025-10-05 12:33:35,977 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-05 05:34:09] 2025-10-05 12:33:35,977 | INFO     | pilot state: failed 
[2025-10-05 05:34:09] 2025-10-05 12:33:35,977 | INFO     | transexitcode: 65
[2025-10-05 05:34:09] 2025-10-05 12:33:35,977 | INFO     | exeerrorcode: 65
[2025-10-05 05:34:09] 2025-10-05 12:33:35,977 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-05 05:34:09] 2025-10-05 12:33:35,977 | INFO     | exitcode: 65
[2025-10-05 05:34:09] 2025-10-05 12:33:35,977 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-05 05:34:09] 2025-10-05 12:33:35,977 | INFO     | cpuconsumptiontime: 18 s
[2025-10-05 05:34:09] 2025-10-05 12:33:35,977 | INFO     | nevents: 0
[2025-10-05 05:34:09] 2025-10-05 12:33:35,977 | INFO     | neventsw: 0
[2025-10-05 05:34:09] 2025-10-05 12:33:35,977 | INFO     | pid: 2708318
[2025-10-05 05:34:09] 2025-10-05 12:33:35,977 | INFO     | pgrp: 2708318
[2025-10-05 05:34:09] 2025-10-05 12:33:35,977 | INFO     | corecount: 8
[2025-10-05 05:34:09] 2025-10-05 12:33:35,978 | INFO     | event service: False
[2025-10-05 05:34:09] 2025-10-05 12:33:35,978 | INFO     | sizes: {0: 2347988, 1: 2348841, 12: 2348841, 15: 2349131, 23: 2349159, 59: 2372604, 60: 2372708, 61: 2377028, 63: 2377056, 190: 2377222}
[2025-10-05 05:34:09] 2025-10-05 12:33:35,978 | INFO     | --------------------------------------------------
[2025-10-05 05:34:09] 2025-10-05 12:33:35,978 | INFO     | 
[2025-10-05 05:34:09] 2025-10-05 12:33:35,978 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-05 05:34:09] 2025-10-05 12:33:36,200 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-05 05:34:09] 2025-10-05 12:33:36,201 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-05 05:34:09] 2025-10-05 12:33:36,201 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-05 05:34:09] 2025-10-05 12:33:36,201 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-05 05:34:09] 2025-10-05 12:33:36,201 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-05 05:34:09] 2025-10-05 12:33:36,201 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-05 05:34:09] 2025-10-05 12:33:36,201 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-05 05:34:09] 2025-10-05 12:33:36,201 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-05 05:34:09] 2025-10-05 12:33:36,201 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-05 05:34:09] 2025-10-05 12:33:36,201 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-05 05:34:09] 2025-10-05 12:33:36,201 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-05 05:34:09] 2025-10-05 12:33:36,201 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-05 05:34:09] 2025-10-05 12:33:36,201 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-05 05:34:09] 2025-10-05 12:33:36,201 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-05 05:34:09] 2025-10-05 12:33:36,202 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-05 05:34:09] 2025-10-05 12:33:36,202 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-05 05:34:09] 2025-10-05 12:33:36,202 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-05 05:34:09] 2025-10-05 12:33:36,202 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-05 05:34:09] 2025-10-05 12:33:36,202 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-05 05:34:09] 2025-10-05 12:33:36,202 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-05 05:34:09] 2025-10-05 12:33:36,202 | INFO     | job 6831313644 has completed (purged errors)
[2025-10-05 05:34:09] 2025-10-05 12:33:36,202 | INFO     | overall cleanup function is called
[2025-10-05 05:34:09] 2025-10-05 12:33:37,223 | INFO     | --- collectZombieJob: --- 10, [2708318]
[2025-10-05 05:34:09] 2025-10-05 12:33:37,223 | INFO     | zombie collector waiting for pid 2708318
[2025-10-05 05:34:09] 2025-10-05 12:33:37,223 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-05 05:34:09] 2025-10-05 12:33:37,223 | INFO     | collected zombie processes
[2025-10-05 05:34:09] 2025-10-05 12:33:37,224 | INFO     | will attempt to kill all subprocesses of pid=2708318
[2025-10-05 05:34:09] 2025-10-05 12:33:37,487 | INFO     | process IDs to be killed: [2708318] (in reverse order)
[2025-10-05 05:34:09] 2025-10-05 12:33:37,547 | WARNING  | found no corresponding commands to process id(s)
[2025-10-05 05:34:09] 2025-10-05 12:33:37,548 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-05 05:34:09] 2025-10-05 12:33:37,555 | INFO     | did not find any defunct processes belonging to 2708318
[2025-10-05 05:34:09] 2025-10-05 12:33:37,563 | INFO     | did not find any defunct processes belonging to 2708318
[2025-10-05 05:34:09] 2025-10-05 12:33:37,563 | INFO     | ready for new job
[2025-10-05 05:34:09] 2025-10-05 12:33:37,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-05 05:34:09] 2025-10-05 12:33:37,564 | INFO     | ***************************************
[2025-10-05 05:34:09] 2025-10-05 12:33:37,565 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-05 05:34:09] 2025-10-05 12:33:37,565 | INFO     | ***************************************
[2025-10-05 05:34:09] 2025-10-05 12:33:37,565 | INFO     | 
[2025-10-05 05:34:09] 2025-10-05 12:33:37,566 | INFO     | architecture information:
[2025-10-05 05:34:09] 2025-10-05 12:33:37,567 | INFO     | executing command: cat /etc/os-release
[2025-10-05 05:34:09] 2025-10-05 12:33:37,605 | INFO     | cat /etc/os-release:
[2025-10-05 05:34:09] NAME="CentOS Linux"
[2025-10-05 05:34:09] VERSION="7 (Core)"
[2025-10-05 05:34:09] ID="centos"
[2025-10-05 05:34:09] ID_LIKE="rhel fedora"
[2025-10-05 05:34:09] VERSION_ID="7"
[2025-10-05 05:34:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-05 05:34:09] ANSI_COLOR="0;31"
[2025-10-05 05:34:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-05 05:34:09] HOME_URL="https://www.centos.org/"
[2025-10-05 05:34:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-05 05:34:09] 
[2025-10-05 05:34:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-05 05:34:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-05 05:34:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-05 05:34:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-05 05:34:09] 
[2025-10-05 05:34:09] 2025-10-05 12:33:37,605 | INFO     | ***************************************
[2025-10-05 05:34:09] 2025-10-05 12:33:38,109 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-05 05:34:09] 2025-10-05 12:33:38,123 | INFO     | sufficient remaining disk space (1196408438784 B)
[2025-10-05 05:34:09] 2025-10-05 12:33:38,124 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-05 05:34:09] 2025-10-05 12:33:38,124 | INFO     | current server update state: UPDATING_FINAL
[2025-10-05 05:34:09] 2025-10-05 12:33:38,124 | INFO     | update_server=False
[2025-10-05 05:34:09] 2025-10-05 12:33:38,124 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-05 05:34:09] 2025-10-05 12:33:38,377 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-05 05:34:09] 2025-10-05 12:33:38,378 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-05 05:34:09] 2025-10-05 12:33:38,378 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-05 05:34:09] 2025-10-05 12:33:38,378 | INFO     | will abort loop
[2025-10-05 05:34:09] 2025-10-05 12:33:38,726 | INFO     | all data control threads have been joined
[2025-10-05 05:34:09] 2025-10-05 12:33:38,884 | INFO     | all job control threads have been joined
[2025-10-05 05:34:09] 2025-10-05 12:33:39,130 | INFO     | [job] retrieve thread has finished
[2025-10-05 05:34:09] 2025-10-05 12:33:39,160 | INFO     | [payload] validate_pre thread has finished
[2025-10-05 05:34:09] 2025-10-05 12:33:39,316 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-05 05:34:09] 2025-10-05 12:33:39,342 | INFO     | [data] copytool_in thread has finished
[2025-10-05 05:34:09] 2025-10-05 12:33:39,384 | INFO     | [job] job monitor thread has finished
[2025-10-05 05:34:09] 2025-10-05 12:33:39,433 | INFO     | all payload control threads have been joined
[2025-10-05 05:34:09] 2025-10-05 12:33:39,444 | INFO     | [payload] execute_payloads thread has finished
[2025-10-05 05:34:09] 2025-10-05 12:33:39,728 | INFO     | [payload] failed_post thread has finished
[2025-10-05 05:34:09] 2025-10-05 12:33:39,732 | INFO     | [data] control thread has finished
[2025-10-05 05:34:09] 2025-10-05 12:33:39,890 | INFO     | [job] control thread has finished
[2025-10-05 05:34:09] 2025-10-05 12:33:40,138 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-05 05:34:09] 2025-10-05 12:33:40,353 | INFO     | [payload] validate_post thread has finished
[2025-10-05 05:34:09] 2025-10-05 12:33:40,439 | INFO     | [payload] control thread has finished
[2025-10-05 05:34:09] 2025-10-05 12:33:40,486 | INFO     | [job] validate thread has finished
[2025-10-05 05:34:09] 2025-10-05 12:33:40,556 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-05 05:34:09] 2025-10-05 12:33:40,611 | INFO     | [job] create_data_payload thread has finished
[2025-10-05 05:34:09] 2025-10-05 12:33:40,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-05 05:34:09] 2025-10-05 12:33:41,330 | INFO     | [data] copytool_out thread has finished
[2025-10-05 05:34:09] 2025-10-05 12:33:41,676 | INFO     | [job] queue monitor thread has finished
[2025-10-05 05:34:09] 2025-10-05 12:33:44,565 | INFO     | [data] queue_monitor thread has finished
[2025-10-05 05:34:09] 2025-10-05 12:33:51,129 | INFO     | [monitor] cgroup control has ended
[2025-10-05 05:34:09] 2025-10-05 12:33:53,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140088084854592)>', '<ExcThread(monitor, started 140087765473024)>']
[2025-10-05 05:34:09] 2025-10-05 12:33:58,224 | INFO     | all workflow threads have been joined
[2025-10-05 05:34:09] 2025-10-05 12:33:58,224 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-05 05:34:09] 2025-10-05 12:33:58,225 | INFO     | traces error code: 0
[2025-10-05 05:34:09] 2025-10-05 12:33:58,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-05 05:34:09] 2025-10-05 12:34:09,041 | INFO     | PID=2701420 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-05 05:34:09] 2025-10-05 12:34:09,041 | INFO     | .. there are 26 such processes running
[2025-10-05 05:34:09] 2025-10-05 12:34:09,042 | INFO     | found 0 job(s) in 20 queues
[2025-10-05 05:34:09] 2025-10-05 12:34:09,042 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-05 05:34:09] 2025-10-05 12:34:09,042 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-05 05:34:09] 2025-10-05 12:34:09,042 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-05 05:34:09] 2025-10-05 12:34:09,042 | INFO     | [monitor] control thread has ended
[2025-10-05 05:34:09] 2025-10-05 12:34:09,152 [wrapper] ==== pilot stdout END ====
[2025-10-05 05:34:09] 2025-10-05 12:34:09,165 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-05 05:34:09] 2025-10-05 12:34:09,176 [wrapper] pilotpid: 2701420
[2025-10-05 05:34:09] 2025-10-05 12:34:09,184 [wrapper] Pilot exit status: 0
[2025-10-05 05:34:09] 2025-10-05 12:34:09,234 [wrapper] pandaids: 6831313644
[2025-10-05 05:34:09] 2025-10-05 12:34:09,308 [wrapper] cleanup supervisor_pilot 2701426 2701421
[2025-10-05 05:34:09] 2025-10-05 12:34:09,311 [wrapper] Test setup, not cleaning
[2025-10-05 05:34:09] 2025-10-05 12:34:09,313 [wrapper] apfmon messages muted
[2025-10-05 05:34:09] 2025-10-05 12:34:09,315 [wrapper] ==== wrapper stdout END ====
[2025-10-05 05:34:09] 2025-10-05 12:34:09,317 [wrapper] ==== wrapper stderr END ====
[2025-10-05 05:34:09]  *** Error codes and diagnostics ***
[2025-10-05 05:34:09]     "exeErrorCode": 65,
[2025-10-05 05:34:09]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-05 05:34:09]     "pilotErrorCode": 1305,
[2025-10-05 05:34:09]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-05 05:34:09]  *** Listing of results directory ***
[2025-10-05 05:34:09] total 213004
[2025-10-05 05:34:09] -rw-r--r--. 1 boinc boinc    563267 Aug  1 02:52 pilot3.tar.gz
[2025-10-05 05:34:09] -rw-r--r--. 1 boinc boinc      5112 Oct  5 03:49 queuedata.json
[2025-10-05 05:34:09] -rwx------. 1 boinc boinc     36292 Oct  5 03:49 runpilot2-wrapper.sh
[2025-10-05 05:34:09] -rw-r--r--. 1 boinc boinc       100 Oct  5 05:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-05 05:34:09] -rwxr-xr-x. 1 boinc boinc      7986 Oct  5 05:29 run_atlas
[2025-10-05 05:34:09] -rw-r--r--. 1 boinc boinc       105 Oct  5 05:29 job.xml
[2025-10-05 05:34:09] -rw-r--r--. 1 boinc boinc      6443 Oct  5 05:29 init_data.xml
[2025-10-05 05:34:09] -rw-r--r--. 2 boinc boinc 213986864 Oct  5 05:29 EVNT.46376901._003011.pool.root.1
[2025-10-05 05:34:09] drwxrwx--x. 2 boinc boinc      4096 Oct  5 05:29 shared
[2025-10-05 05:34:09] -rw-r--r--. 2 boinc boinc    576700 Oct  5 05:29 input.tar.gz
[2025-10-05 05:34:09] -rw-r--r--. 2 boinc boinc     15120 Oct  5 05:29 start_atlas.sh
[2025-10-05 05:34:09] -rw-r--r--. 1 boinc boinc         0 Oct  5 05:29 boinc_lockfile
[2025-10-05 05:34:09] -rw-r--r--. 1 boinc boinc      2519 Oct  5 05:29 pandaJob.out
[2025-10-05 05:34:09] -rw-------. 1 boinc boinc    973974 Oct  5 05:29 agis_schedconf.cvmfs.json
[2025-10-05 05:34:09] -rw-------. 1 boinc boinc   1560401 Oct  5 05:29 agis_ddmendpoints.agis.ALL.json
[2025-10-05 05:34:09] drwx------. 4 boinc boinc      4096 Oct  5 05:29 pilot3
[2025-10-05 05:34:09] -rw-r--r--. 1 boinc boinc       524 Oct  5 05:31 boinc_task_state.xml
[2025-10-05 05:34:09] -rw-------. 1 boinc boinc       948 Oct  5 05:31 memory_monitor_summary.json
[2025-10-05 05:34:09] -rw-------. 1 boinc boinc     22278 Oct  5 05:31 log.46376905._082162.job.log.tgz.1
[2025-10-05 05:34:09] -rw-------. 1 boinc boinc      8402 Oct  5 05:33 heartbeat.json
[2025-10-05 05:34:09] -rw-r--r--. 1 boinc boinc      8192 Oct  5 05:34 boinc_mmap_file
[2025-10-05 05:34:09] -rw-r--r--. 1 boinc boinc        23 Oct  5 05:34 wrapper_checkpoint.txt
[2025-10-05 05:34:09] -rw-------. 1 boinc boinc       823 Oct  5 05:34 pilotlog.txt
[2025-10-05 05:34:09] -rw-------. 1 boinc boinc        95 Oct  5 05:34 pilot_heartbeat.json
[2025-10-05 05:34:09] -rw-------. 1 boinc boinc     90663 Oct  5 05:34 log.46376905._082162.job.log.1
[2025-10-05 05:34:09] -rw-------. 1 boinc boinc       188 Oct  5 05:34 output.list
[2025-10-05 05:34:09] -rw-r--r--. 1 boinc boinc       620 Oct  5 05:34 runtime_log
[2025-10-05 05:34:09] -rw-------. 1 boinc boinc    133120 Oct  5 05:34 result.tar.gz
[2025-10-05 05:34:09] -rw-r--r--. 1 boinc boinc      8526 Oct  5 05:34 runtime_log.err
[2025-10-05 05:34:09] -rw-------. 1 boinc boinc       644 Oct  5 05:34 3FBODm9TbP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEzONDmXAlTmm.diag
[2025-10-05 05:34:09] -rw-r--r--. 1 boinc boinc     21857 Oct  5 05:34 stderr.txt
[2025-10-05 05:34:09] No HITS result produced
[2025-10-05 05:34:09]  *** Contents of shared directory: ***
[2025-10-05 05:34:09] total 209688
[2025-10-05 05:34:09] -rw-r--r--. 2 boinc boinc 213986864 Oct  5 05:29 ATLAS.root_0
[2025-10-05 05:34:09] -rw-r--r--. 2 boinc boinc    576700 Oct  5 05:29 input.tar.gz
[2025-10-05 05:34:09] -rw-r--r--. 2 boinc boinc     15120 Oct  5 05:29 start_atlas.sh
[2025-10-05 05:34:09] -rw-------. 1 boinc boinc    133120 Oct  5 05:34 result.tar.gz
05:34:10 (2697727): run_atlas exited; CPU time 27.816489
05:34:10 (2697727): called boinc_finish(0)

</stderr_txt>
]]>

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