Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:24:43 (3518708): wrapper (7.7.26015): starting
03:24:43 (3518708): wrapper: running run_atlas (--nthreads 4)
[2025-10-08 03:24:43] Arguments: --nthreads 4
[2025-10-08 03:24:43] Threads: 4
[2025-10-08 03:24:43] Checking for CVMFS
[2025-10-08 03:24:43] No cvmfs_config command found, will try listing directly
[2025-10-08 03:24:43] CVMFS is ok
[2025-10-08 03:24:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 03:24:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 03:24:43] Further information can be found at the LHC@home message board.
[2025-10-08 03:24:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 03:24:43] Checking for apptainer binary...
[2025-10-08 03:24:43] which: no apptainer in ((null))
[2025-10-08 03:24:43] apptainer is not installed, using version from CVMFS
[2025-10-08 03:24:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 03:24:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-10-08 03:24:43] apptainer works
[2025-10-08 03:24:43] Set ATHENA_PROC_NUMBER=4
[2025-10-08 03:24:43] Set ATHENA_CORE_NUMBER=4
[2025-10-08 03:24:43] Starting ATLAS job with PandaID=6831127039
[2025-10-08 03:24:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 05:41:13]  *** The last 200 lines of the pilot log: ***
[2025-10-08 05:41:13] 2025-10-08 03:40:06,912 | INFO     | time since job start (8111s) is within the limit (172800.0s)
[2025-10-08 05:41:13] 2025-10-08 03:40:07,436 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-08 05:41:13] 2025-10-08 03:40:07,447 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2709.2540624999997
[2025-10-08 05:41:13] 2025-10-08 03:40:07,460 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6831127039/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 05:41:13] 2025-10-08 03:40:07,460 | INFO     | extracted standard info from prmon json
[2025-10-08 05:41:13] 2025-10-08 03:40:07,461 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 05:41:13] 2025-10-08 03:40:07,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 05:41:13] 2025-10-08 03:40:07,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 05:41:13] 2025-10-08 03:40:07,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 05:41:13] 2025-10-08 03:40:07,464 | INFO     | fitting pss+swap vs Time
[2025-10-08 05:41:13] 2025-10-08 03:40:07,465 | INFO     | sum of square deviations: 729472282.0
[2025-10-08 05:41:13] 2025-10-08 03:40:07,465 | INFO     | sum of deviations: -10794861889.0
[2025-10-08 05:41:13] 2025-10-08 03:40:07,466 | INFO     | mean x: 1759890746.0
[2025-10-08 05:41:13] 2025-10-08 03:40:07,466 | INFO     | mean y: 2354444.6090225563
[2025-10-08 05:41:13] 2025-10-08 03:40:07,466 | INFO     | -- intersect: 26045533893.06294
[2025-10-08 05:41:13] 2025-10-08 03:40:07,466 | INFO     | intersect: 26045533893.06294
[2025-10-08 05:41:13] 2025-10-08 03:40:07,466 | INFO     | chi2: 1.327836324150551
[2025-10-08 05:41:13] 2025-10-08 03:40:07,466 | INFO     | sum of square deviations: 650252192.0
[2025-10-08 05:41:13] 2025-10-08 03:40:07,467 | INFO     | sum of deviations: -7906854343.0
[2025-10-08 05:41:13] 2025-10-08 03:40:07,467 | INFO     | mean x: 1759890593.5
[2025-10-08 05:41:13] 2025-10-08 03:40:07,467 | INFO     | mean y: 2359869.03125
[2025-10-08 05:41:13] 2025-10-08 03:40:07,468 | INFO     | -- intersect: 21402054869.859978
[2025-10-08 05:41:13] 2025-10-08 03:40:07,468 | INFO     | intersect: 21402054869.859978
[2025-10-08 05:41:13] 2025-10-08 03:40:07,468 | INFO     | chi2: 1.2758933586155703
[2025-10-08 05:41:13] 2025-10-08 03:40:07,468 | INFO     | current chi2=1.2758933586155703 (change=3.911850021741946 %)
[2025-10-08 05:41:13] 2025-10-08 03:40:07,468 | INFO     | right removable region: 127
[2025-10-08 05:41:13] 2025-10-08 03:40:07,468 | INFO     | sum of square deviations: 650252192.0
[2025-10-08 05:41:13] 2025-10-08 03:40:07,469 | INFO     | sum of deviations: -22011237438.0
[2025-10-08 05:41:13] 2025-10-08 03:40:07,469 | INFO     | mean x: 1759890898.5
[2025-10-08 05:41:13] 2025-10-08 03:40:07,469 | INFO     | mean y: 2375298.484375
[2025-10-08 05:41:13] 2025-10-08 03:40:07,469 | INFO     | -- intersect: 59575225507.12874
[2025-10-08 05:41:13] 2025-10-08 03:40:07,469 | INFO     | intersect: 59575225507.12874
[2025-10-08 05:41:13] 2025-10-08 03:40:07,470 | INFO     | chi2: 0.1444745613282506
[2025-10-08 05:41:13] 2025-10-08 03:40:07,470 | INFO     | current chi2=0.1444745613282506 (change=89.1195504520729 %)
[2025-10-08 05:41:13] 2025-10-08 03:40:07,470 | INFO     | sum of square deviations: 576985702.0
[2025-10-08 05:41:13] 2025-10-08 03:40:07,471 | INFO     | sum of deviations: -17113032110.0
[2025-10-08 05:41:13] 2025-10-08 03:40:07,471 | INFO     | mean x: 1759891051.0
[2025-10-08 05:41:13] 2025-10-08 03:40:07,471 | INFO     | mean y: 2365179.3333333335
[2025-10-08 05:41:13] 2025-10-08 03:40:07,471 | INFO     | -- intersect: 52199624074.08607
[2025-10-08 05:41:13] 2025-10-08 03:40:07,471 | INFO     | intersect: 52199624074.08607
[2025-10-08 05:41:13] 2025-10-08 03:40:07,471 | INFO     | chi2: 0.12231067091154696
[2025-10-08 05:41:13] 2025-10-08 03:40:07,471 | INFO     | current chi2=0.12231067091154696 (change=15.341033198465023 %)
[2025-10-08 05:41:13] 2025-10-08 03:40:07,472 | INFO     | left removable region: 20
[2025-10-08 05:41:13] 2025-10-08 03:40:07,472 | INFO     | sum of square deviations: 379832238.0
[2025-10-08 05:41:13] 2025-10-08 03:40:07,472 | INFO     | sum of deviations: -8326130096.0
[2025-10-08 05:41:13] 2025-10-08 03:40:07,472 | INFO     | mean x: 1759891173.0
[2025-10-08 05:41:13] 2025-10-08 03:40:07,473 | INFO     | mean y: 2356707.3644859814
[2025-10-08 05:41:13] 2025-10-08 03:40:07,473 | INFO     | -- intersect: 38580132354.728165
[2025-10-08 05:41:13] 2025-10-08 03:40:07,473 | INFO     | intersect: 38580132354.728165
[2025-10-08 05:41:13] 2025-10-08 03:40:07,473 | INFO     | chi2: 0.05428616982499912
[2025-10-08 05:41:13] 2025-10-08 03:40:07,473 | INFO     | -- intersect: 38580132354.728165
[2025-10-08 05:41:13] 2025-10-08 03:40:07,473 | INFO     | current memory leak: -21.92 B/s (using 107 data points, chi2=0.05)
[2025-10-08 05:41:13] 2025-10-08 03:40:07,474 | INFO     | could have reported an average CPU frequency of 2748 MHz (8 samples)
[2025-10-08 05:41:13] 2025-10-08 03:40:07,474 | INFO     | ..............................
[2025-10-08 05:41:13] 2025-10-08 03:40:07,474 | INFO     | . Timing measurements:
[2025-10-08 05:41:13] 2025-10-08 03:40:07,474 | INFO     | . get job = 0 s
[2025-10-08 05:41:13] 2025-10-08 03:40:07,474 | INFO     | . initial setup = 1 s
[2025-10-08 05:41:13] 2025-10-08 03:40:07,474 | INFO     | . payload setup = 5 s
[2025-10-08 05:41:13] 2025-10-08 03:40:07,474 | INFO     | . stage-in = 0 s
[2025-10-08 05:41:13] 2025-10-08 03:40:07,475 | INFO     | . payload execution = 8081 s
[2025-10-08 05:41:13] 2025-10-08 03:40:07,475 | INFO     | . stage-out = 0 s
[2025-10-08 05:41:13] 2025-10-08 03:40:07,475 | INFO     | . log creation = 0 s
[2025-10-08 05:41:13] 2025-10-08 03:40:07,475 | INFO     | ..............................
[2025-10-08 05:41:13] 2025-10-08 03:40:07,579 | INFO     | 
[2025-10-08 05:41:13] 2025-10-08 03:40:07,579 | INFO     | job summary report
[2025-10-08 05:41:13] 2025-10-08 03:40:07,579 | INFO     | --------------------------------------------------
[2025-10-08 05:41:13] 2025-10-08 03:40:07,580 | INFO     | PanDA job id: 6831127039
[2025-10-08 05:41:13] 2025-10-08 03:40:07,580 | INFO     | task id: 46376905
[2025-10-08 05:41:13] 2025-10-08 03:40:07,580 | INFO     | errors: (none)
[2025-10-08 05:41:13] 2025-10-08 03:40:07,581 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 05:41:13] 2025-10-08 03:40:07,581 | INFO     | pilot state: finished 
[2025-10-08 05:41:13] 2025-10-08 03:40:07,581 | INFO     | transexitcode: 0
[2025-10-08 05:41:13] 2025-10-08 03:40:07,581 | INFO     | exeerrorcode: 0
[2025-10-08 05:41:13] 2025-10-08 03:40:07,581 | INFO     | exeerrordiag: 
[2025-10-08 05:41:13] 2025-10-08 03:40:07,581 | INFO     | exitcode: 0
[2025-10-08 05:41:13] 2025-10-08 03:40:07,581 | INFO     | exitmsg: OK
[2025-10-08 05:41:13] 2025-10-08 03:40:07,581 | INFO     | cpuconsumptiontime: 31127 s
[2025-10-08 05:41:13] 2025-10-08 03:40:07,582 | INFO     | nevents: 400
[2025-10-08 05:41:13] 2025-10-08 03:40:07,582 | INFO     | neventsw: 0
[2025-10-08 05:41:13] 2025-10-08 03:40:07,582 | INFO     | pid: 3530299
[2025-10-08 05:41:13] 2025-10-08 03:40:07,582 | INFO     | pgrp: 3530299
[2025-10-08 05:41:13] 2025-10-08 03:40:07,583 | INFO     | corecount: 4
[2025-10-08 05:41:13] 2025-10-08 03:40:07,583 | INFO     | event service: False
[2025-10-08 05:41:13] 2025-10-08 03:40:07,583 | INFO     | sizes: {0: 2348656, 1: 2348855, 5: 2349117, 12: 2349173, 8090: 2377030, 8092: 2386234, 8097: 2386372}
[2025-10-08 05:41:13] 2025-10-08 03:40:07,583 | INFO     | --------------------------------------------------
[2025-10-08 05:41:13] 2025-10-08 03:40:07,583 | INFO     | 
[2025-10-08 05:41:13] 2025-10-08 03:40:07,583 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-10-08 05:41:13] 2025-10-08 03:40:07,604 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 05:41:13] 2025-10-08 03:40:07,605 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 05:41:13] 2025-10-08 03:40:07,605 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 05:41:13] 2025-10-08 03:40:07,605 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 05:41:13] 2025-10-08 03:40:07,605 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 05:41:13] 2025-10-08 03:40:07,605 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 05:41:13] 2025-10-08 03:40:07,605 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 05:41:13] 2025-10-08 03:40:07,605 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 05:41:13] 2025-10-08 03:40:07,606 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 05:41:13] 2025-10-08 03:40:07,606 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 05:41:13] 2025-10-08 03:40:07,606 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 05:41:13] 2025-10-08 03:40:07,606 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 05:41:13] 2025-10-08 03:40:07,606 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 05:41:13] 2025-10-08 03:40:07,606 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 05:41:13] 2025-10-08 03:40:07,606 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 05:41:13] 2025-10-08 03:40:07,606 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 05:41:13] 2025-10-08 03:40:07,606 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 05:41:13] 2025-10-08 03:40:07,606 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 05:41:13] 2025-10-08 03:40:07,606 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 05:41:13] 2025-10-08 03:40:07,607 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 05:41:13] 2025-10-08 03:40:07,607 | INFO     | job 6831127039 has completed (purged errors)
[2025-10-08 05:41:13] 2025-10-08 03:40:07,607 | INFO     | overall cleanup function is called
[2025-10-08 05:41:13] 2025-10-08 03:40:08,615 | INFO     | --- collectZombieJob: --- 10, [3530299]
[2025-10-08 05:41:13] 2025-10-08 03:40:08,615 | INFO     | zombie collector waiting for pid 3530299
[2025-10-08 05:41:13] 2025-10-08 03:40:08,615 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 05:41:13] 2025-10-08 03:40:08,615 | INFO     | collected zombie processes
[2025-10-08 05:41:13] 2025-10-08 03:40:08,615 | INFO     | will attempt to kill all subprocesses of pid=3530299
[2025-10-08 05:41:13] 2025-10-08 03:40:08,966 | INFO     | process IDs to be killed: [3530299] (in reverse order)
[2025-10-08 05:41:13] 2025-10-08 03:40:09,073 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 05:41:13] 2025-10-08 03:40:09,074 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 05:41:13] 2025-10-08 03:40:09,085 | INFO     | did not find any defunct processes belonging to 3530299
[2025-10-08 05:41:13] 2025-10-08 03:40:09,095 | INFO     | did not find any defunct processes belonging to 3530299
[2025-10-08 05:41:13] 2025-10-08 03:40:09,096 | INFO     | ready for new job
[2025-10-08 05:41:13] 2025-10-08 03:40:09,096 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 05:41:13] 2025-10-08 03:40:09,098 | INFO     | ***************************************
[2025-10-08 05:41:13] 2025-10-08 03:40:09,098 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 05:41:13] 2025-10-08 03:40:09,098 | INFO     | ***************************************
[2025-10-08 05:41:13] 2025-10-08 03:40:09,098 | INFO     | 
[2025-10-08 05:41:13] 2025-10-08 03:40:09,103 | INFO     | architecture information:
[2025-10-08 05:41:13] 2025-10-08 03:40:09,103 | INFO     | executing command: cat /etc/os-release
[2025-10-08 05:41:13] 2025-10-08 03:40:09,119 | INFO     | cat /etc/os-release:
[2025-10-08 05:41:13] NAME="CentOS Linux"
[2025-10-08 05:41:13] VERSION="7 (Core)"
[2025-10-08 05:41:13] ID="centos"
[2025-10-08 05:41:13] ID_LIKE="rhel fedora"
[2025-10-08 05:41:13] VERSION_ID="7"
[2025-10-08 05:41:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 05:41:13] ANSI_COLOR="0;31"
[2025-10-08 05:41:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 05:41:13] HOME_URL="https://www.centos.org/"
[2025-10-08 05:41:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 05:41:13] 
[2025-10-08 05:41:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 05:41:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 05:41:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 05:41:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 05:41:13] 
[2025-10-08 05:41:13] 2025-10-08 03:40:09,120 | INFO     | ***************************************
[2025-10-08 05:41:13] 2025-10-08 03:40:09,623 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-10-08 05:41:13] 2025-10-08 03:40:09,639 | INFO     | sufficient remaining disk space (693541797888 B)
[2025-10-08 05:41:13] 2025-10-08 03:40:09,640 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 05:41:13] 2025-10-08 03:40:09,640 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 05:41:13] 2025-10-08 03:40:09,640 | INFO     | update_server=False
[2025-10-08 05:41:13] 2025-10-08 03:40:09,640 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 05:41:13] 2025-10-08 03:40:09,641 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 05:41:13] 2025-10-08 03:40:10,011 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-08 05:41:13] 2025-10-08 03:40:10,011 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-08 05:41:13] 2025-10-08 03:40:10,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 05:41:13] 2025-10-08 03:40:10,011 | INFO     | will abort loop
[2025-10-08 05:41:13] 2025-10-08 03:40:10,641 | INFO     | [job] retrieve thread has finished
[2025-10-08 05:41:13] 2025-10-08 03:40:10,648 | INFO     | all payload control threads have been joined
[2025-10-08 05:41:13] 2025-10-08 03:40:10,734 | INFO     | all data control threads have been joined
[2025-10-08 05:41:13] 2025-10-08 03:40:10,877 | INFO     | all job control threads have been joined
[2025-10-08 05:41:13] 2025-10-08 03:40:10,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 05:41:13] 2025-10-08 03:40:10,883 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 05:41:13] 2025-10-08 03:40:10,981 | INFO     | [data] copytool_in thread has finished
[2025-10-08 05:41:13] 2025-10-08 03:40:11,016 | INFO     | [job] job monitor thread has finished
[2025-10-08 05:41:13] 2025-10-08 03:40:11,314 | INFO     | [job] validate thread has finished
[2025-10-08 05:41:13] 2025-10-08 03:40:11,533 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 05:41:13] 2025-10-08 03:40:11,588 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 05:41:13] 2025-10-08 03:40:11,639 | INFO     | [payload] validate_post thread has finished
[2025-10-08 05:41:13] 2025-10-08 03:40:11,653 | INFO     | [payload] control thread has finished
[2025-10-08 05:41:13] 2025-10-08 03:40:11,736 | INFO     | [data] control thread has finished
[2025-10-08 05:41:13] 2025-10-08 03:40:11,751 | INFO     | [payload] failed_post thread has finished
[2025-10-08 05:41:13] 2025-10-08 03:40:11,798 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 05:41:13] 2025-10-08 03:40:11,883 | INFO     | [job] control thread has finished
[2025-10-08 05:41:13] 2025-10-08 03:40:12,589 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 05:41:13] 2025-10-08 03:40:12,882 | INFO     | [data] copytool_out thread has finished
[2025-10-08 05:41:13] 2025-10-08 03:40:13,595 | INFO     | [job] queue monitor thread has finished
[2025-10-08 05:41:13] 2025-10-08 03:40:13,647 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 05:41:13] 2025-10-08 03:40:40,363 | INFO     | PID=3522868 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 05:41:13] 2025-10-08 03:40:40,364 | INFO     | .. there are 8 such processes running
[2025-10-08 05:41:13] 2025-10-08 03:40:40,364 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 05:41:13] 2025-10-08 03:40:40,364 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 05:41:13] 2025-10-08 03:40:40,364 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 05:41:13] 2025-10-08 03:41:06,307 | INFO     | [monitor] cgroup control has ended
[2025-10-08 05:41:13] 2025-10-08 03:41:08,055 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22772540282688)>', '<ExcThread(monitor, started 22772302448384)>']
[2025-10-08 05:41:13] 2025-10-08 03:41:08,495 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 05:41:13] 2025-10-08 03:41:08,495 | INFO     | [monitor] control thread has ended
[2025-10-08 05:41:13] 2025-10-08 03:41:13,081 | INFO     | all workflow threads have been joined
[2025-10-08 05:41:13] 2025-10-08 03:41:13,081 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 05:41:13] 2025-10-08 03:41:13,081 | INFO     | traces error code: 0
[2025-10-08 05:41:13] 2025-10-08 03:41:13,081 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 05:41:13] 2025-10-08 03:41:13,218 [wrapper] ==== pilot stdout END ====
[2025-10-08 05:41:13] 2025-10-08 03:41:13,220 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 05:41:13] 2025-10-08 03:41:13,223 [wrapper] pilotpid: 3522868
[2025-10-08 05:41:13] 2025-10-08 03:41:13,226 [wrapper] Pilot exit status: 0
[2025-10-08 05:41:13] 2025-10-08 03:41:13,236 [wrapper] pandaids: 6831127039
[2025-10-08 05:41:13] 2025-10-08 03:41:13,300 [wrapper] cleanup supervisor_pilot 3861594 3522869
[2025-10-08 05:41:13] 2025-10-08 03:41:13,303 [wrapper] Test setup, not cleaning
[2025-10-08 05:41:13] 2025-10-08 03:41:13,306 [wrapper] apfmon messages muted
[2025-10-08 05:41:13] 2025-10-08 03:41:13,309 [wrapper] ==== wrapper stdout END ====
[2025-10-08 05:41:13] 2025-10-08 03:41:13,311 [wrapper] ==== wrapper stderr END ====
[2025-10-08 05:41:13]  *** Error codes and diagnostics ***
[2025-10-08 05:41:13]     "exeErrorCode": 0,
[2025-10-08 05:41:13]     "exeErrorDiag": "",
[2025-10-08 05:41:13]     "pilotErrorCode": 0,
[2025-10-08 05:41:13]     "pilotErrorDiag": "",
[2025-10-08 05:41:13]  *** Listing of results directory ***
[2025-10-08 05:41:13] total 389480
[2025-10-08 05:41:13] -rw-r--r-- 1 boinc boinc      5112 Oct  5 10:54 queuedata.json
[2025-10-08 05:41:13] -rw-r--r-- 1 boinc boinc    552446 Oct  5 10:56 pilot3.tar.gz
[2025-10-08 05:41:13] -rwx------ 1 boinc boinc     36292 Oct  5 10:56 runpilot2-wrapper.sh
[2025-10-08 05:41:13] -rw-r--r-- 1 boinc boinc       100 Oct  8 03:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 05:41:13] -rwxr-xr-x 1 boinc boinc      7986 Oct  8 03:24 run_atlas
[2025-10-08 05:41:13] -rw-r--r-- 1 boinc boinc       105 Oct  8 03:24 job.xml
[2025-10-08 05:41:13] -rw-r--r-- 2 boinc boinc 214945779 Oct  8 03:24 EVNT.46376901._002934.pool.root.1
[2025-10-08 05:41:13] -rw-r--r-- 1 boinc boinc      6634 Oct  8 03:24 init_data.xml
[2025-10-08 05:41:13] drwxrwx--x 2 boinc boinc      4096 Oct  8 03:24 shared
[2025-10-08 05:41:13] -rw-r--r-- 2 boinc boinc    565602 Oct  8 03:24 input.tar.gz
[2025-10-08 05:41:13] -rw-r--r-- 2 boinc boinc     15120 Oct  8 03:24 start_atlas.sh
[2025-10-08 05:41:13] -rw-r--r-- 1 boinc boinc         0 Oct  8 03:24 boinc_lockfile
[2025-10-08 05:41:13] -rw-r--r-- 1 boinc boinc      2519 Oct  8 03:24 pandaJob.out
[2025-10-08 05:41:13] -rw------- 1 boinc boinc    979833 Oct  8 03:24 agis_schedconf.cvmfs.json
[2025-10-08 05:41:13] -rw------- 1 boinc boinc   1560401 Oct  8 03:24 agis_ddmendpoints.agis.ALL.json
[2025-10-08 05:41:13] drwx------ 4 boinc boinc      4096 Oct  8 03:24 pilot3
[2025-10-08 05:41:13] -rw-r--r-- 1 boinc boinc       528 Oct  8 05:39 boinc_task_state.xml
[2025-10-08 05:41:13] -rw------- 1 boinc boinc 177039303 Oct  8 05:39 HITS.46376905._080153.pool.root.1
[2025-10-08 05:41:13] -rw------- 1 boinc boinc        95 Oct  8 05:39 pilot_heartbeat.json
[2025-10-08 05:41:13] -rw------- 1 boinc boinc      1033 Oct  8 05:39 memory_monitor_summary.json
[2025-10-08 05:41:13] -rw------- 1 boinc boinc    314364 Oct  8 05:40 log.46376905._080153.job.log.tgz.1
[2025-10-08 05:41:13] -rw------- 1 boinc boinc      7830 Oct  8 05:40 heartbeat.json
[2025-10-08 05:41:13] -rw-r--r-- 1 boinc boinc      8192 Oct  8 05:41 boinc_mmap_file
[2025-10-08 05:41:13] -rw-r--r-- 1 boinc boinc        26 Oct  8 05:41 wrapper_checkpoint.txt
[2025-10-08 05:41:13] -rw------- 1 boinc boinc      5019 Oct  8 05:41 pilotlog.txt
[2025-10-08 05:41:13] -rw------- 1 boinc boinc   1160239 Oct  8 05:41 log.46376905._080153.job.log.1
[2025-10-08 05:41:13] -rw------- 1 boinc boinc       357 Oct  8 05:41 output.list
[2025-10-08 05:41:13] -rw-r--r-- 1 boinc boinc       620 Oct  8 05:41 runtime_log
[2025-10-08 05:41:13] -rw------- 1 boinc boinc   1495040 Oct  8 05:41 result.tar.gz
[2025-10-08 05:41:13] -rw------- 1 boinc boinc       662 Oct  8 05:41 wKmKDmviZP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGfONDmTK0pTo.diag
[2025-10-08 05:41:13] -rw-r--r-- 1 boinc boinc      9069 Oct  8 05:41 runtime_log.err
[2025-10-08 05:41:13] -rw-r--r-- 1 boinc boinc     20850 Oct  8 05:41 stderr.txt
[2025-10-08 05:41:13] HITS file was successfully produced:
[2025-10-08 05:41:13] -rw------- 1 boinc boinc 177039303 Oct  8 05:39 shared/HITS.pool.root.1
[2025-10-08 05:41:13]  *** Contents of shared directory: ***
[2025-10-08 05:41:13] total 384840
[2025-10-08 05:41:13] -rw-r--r-- 2 boinc boinc 214945779 Oct  8 03:24 ATLAS.root_0
[2025-10-08 05:41:13] -rw-r--r-- 2 boinc boinc    565602 Oct  8 03:24 input.tar.gz
[2025-10-08 05:41:13] -rw-r--r-- 2 boinc boinc     15120 Oct  8 03:24 start_atlas.sh
[2025-10-08 05:41:13] -rw------- 1 boinc boinc 177039303 Oct  8 05:39 HITS.pool.root.1
[2025-10-08 05:41:13] -rw------- 1 boinc boinc   1495040 Oct  8 05:41 result.tar.gz
05:41:15 (3518708): run_atlas exited; CPU time 31434.828647
05:41:15 (3518708): called boinc_finish(0)

</stderr_txt>
]]>

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