Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:49:50 (1191535): wrapper (7.7.26015): starting
23:49:50 (1191535): wrapper: running run_atlas (--nthreads 12)
[2025-10-04 23:49:50] Arguments: --nthreads 12
[2025-10-04 23:49:50] Threads: 12
[2025-10-04 23:49:50] Checking for CVMFS
[2025-10-04 23:49:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-04 23:49:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-04 23:49:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-04 23:49:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-04 23:49:51] 2.11.5.0 2838 21036 209964 151354 3 443 34525961 45568000 18398 130560 0 197020457 99.843 96533563 32655 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-04 23:49:51] CVMFS is ok
[2025-10-04 23:49:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-04 23:49:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-04 23:49:51] Further information can be found at the LHC@home message board.
[2025-10-04 23:49:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-04 23:49:51] Checking for apptainer binary...
[2025-10-04 23:49:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-04 23:49:51] Running /usr/bin/apptainer --version
[2025-10-04 23:49:51] apptainer version 1.4.1-1.el9
[2025-10-04 23:49:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-04 23:49:51] wns0073.triumf.lcg
[2025-10-04 23:49:51] apptainer works
[2025-10-04 23:49:51] Set ATHENA_PROC_NUMBER=12
[2025-10-04 23:49:51] Set ATHENA_CORE_NUMBER=12
[2025-10-04 23:49:51] Starting ATLAS job with PandaID=6830895362
[2025-10-04 23:49:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-04 23:54:21]  *** The last 200 lines of the pilot log: ***
[2025-10-04 23:54:21] 2025-10-05 06:53:23,337 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-04 23:54:21] 2025-10-05 06:53:23,337 | WARNING  | found no stored workdir sizes
[2025-10-04 23:54:21] 2025-10-05 06:53:23,337 | INFO     | will not add max space = 0 B to job metrics
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | WARNING  | wrong length of table data, x=[1759647058.0], y=[1122.0] (must be same and length>=4)
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | could have reported an average CPU frequency of 2751 MHz (4 samples)
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | ..............................
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . Timing measurements:
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . get job = 0 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . initial setup = 3 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . payload setup = 13 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . stage-in = 0 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . payload execution = 23 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . stage-out = 0 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . log creation = 0 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | ..............................
[2025-10-04 23:54:21] 2025-10-05 06:53:23,339 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-04 23:54:21] 2025-10-05 06:53:23,339 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6830895362/pilotlog.txt
[2025-10-04 23:54:21] 2025-10-05 06:53:23,359 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-04 23:54:21] - Log from pilotlog.txt -
[2025-10-04 23:54:21] 2025-10-05 06:53:23,337 | INFO     | extracted standard memory fields from prmon json
[2025-10-04 23:54:21] 2025-10-05 06:53:23,337 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-04 23:54:21] 2025-10-05 06:53:23,337 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-04 23:54:21] 2025-10-05 06:53:23,337 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-04 23:54:21] 2025-10-05 06:53:23,337 | WARNING  | found no stored workdir sizes
[2025-10-04 23:54:21] 2025-10-05 06:53:23,337 | INFO     | will not add max space = 0 B to job metrics
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | WARNING  | wrong length of table data, x=[1759647058.0], y=[1122.0] (must be same and length>=4)
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | could have reported an average CPU frequency of 2751 MHz (4 samples)
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | ..............................
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . Timing measurements:
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . get job = 0 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . initial setup = 3 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . payload setup = 13 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . stage-in = 0 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . payload execution = 23 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . stage-out = 0 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . log creation = 0 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | ..............................
[2025-10-04 23:54:21] 2025-10-05 06:53:23,339 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-04 23:54:21] 2025-10-05 06:53:23,339 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6830895362/pilotlog.txt
[2025-10-04 23:54:21] 2025-10-05 06:53:23,359 | WARNING  | 
[2025-10-04 23:54:21] [begin log extracts]
[2025-10-04 23:54:21] - Log from pilotlog.txt -
[2025-10-04 23:54:21] 2025-10-05 06:53:23,337 | INFO     | extracted standard memory fields from prmon json
[2025-10-04 23:54:21] 2025-10-05 06:53:23,337 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-04 23:54:21] 2025-10-05 06:53:23,337 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-04 23:54:21] 2025-10-05 06:53:23,337 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-04 23:54:21] 2025-10-05 06:53:23,337 | WARNING  | found no stored workdir sizes
[2025-10-04 23:54:21] 2025-10-05 06:53:23,337 | INFO     | will not add max space = 0 B to job metrics
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | WARNING  | wrong length of table data, x=[1759647058.0], y=[1122.0] (must be same and length>=4)
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | could have reported an average CPU frequency of 2751 MHz (4 samples)
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | ..............................
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . Timing measurements:
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . get job = 0 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . initial setup = 3 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . payload setup = 13 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . stage-in = 0 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . payload execution = 23 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . stage-out = 0 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | . log creation = 0 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,338 | INFO     | ..............................
[2025-10-04 23:54:21] 2025-10-05 06:53:23,339 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-04 23:54:21] 2025-10-05 06:53:23,339 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6830895362/pilotlog.txt
[2025-10-04 23:54:21] [end log extracts]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,360 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-04 23:54:21] 2025-10-05 06:53:23,361 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-04 23:54:21] 2025-10-05 06:53:23,925 | INFO     | 
[2025-10-04 23:54:21] 2025-10-05 06:53:23,925 | INFO     | job summary report
[2025-10-04 23:54:21] 2025-10-05 06:53:23,925 | INFO     | --------------------------------------------------
[2025-10-04 23:54:21] 2025-10-05 06:53:23,925 | INFO     | PanDA job id: 6830895362
[2025-10-04 23:54:21] 2025-10-05 06:53:23,925 | INFO     | task id: 46376905
[2025-10-04 23:54:21] 2025-10-05 06:53:23,925 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-04 23:51:08,469 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-04 23:54:21] 2025-10-05 06:53:23,925 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-04 23:54:21] 2025-10-05 06:53:23,926 | INFO     | pilot state: failed 
[2025-10-04 23:54:21] 2025-10-05 06:53:23,926 | INFO     | transexitcode: 65
[2025-10-04 23:54:21] 2025-10-05 06:53:23,926 | INFO     | exeerrorcode: 65
[2025-10-04 23:54:21] 2025-10-05 06:53:23,926 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-04 23:54:21] 2025-10-05 06:53:23,926 | INFO     | exitcode: 65
[2025-10-04 23:54:21] 2025-10-05 06:53:23,926 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-04 23:54:21] 2025-10-05 06:53:23,926 | INFO     | cpuconsumptiontime: 15 s
[2025-10-04 23:54:21] 2025-10-05 06:53:23,926 | INFO     | nevents: 0
[2025-10-04 23:54:21] 2025-10-05 06:53:23,926 | INFO     | neventsw: 0
[2025-10-04 23:54:21] 2025-10-05 06:53:23,926 | INFO     | pid: 1209605
[2025-10-04 23:54:21] 2025-10-05 06:53:23,926 | INFO     | pgrp: 1209605
[2025-10-04 23:54:21] 2025-10-05 06:53:23,926 | INFO     | corecount: 12
[2025-10-04 23:54:21] 2025-10-05 06:53:23,926 | INFO     | event service: False
[2025-10-04 23:54:21] 2025-10-05 06:53:23,926 | INFO     | sizes: {0: 2348642, 1: 2348841, 10: 2349103, 12: 2349131, 40: 2372352, 41: 2372328, 42: 2376776, 43: 2376832, 167: 2376998}
[2025-10-04 23:54:21] 2025-10-05 06:53:23,926 | INFO     | --------------------------------------------------
[2025-10-04 23:54:21] 2025-10-05 06:53:23,926 | INFO     | 
[2025-10-04 23:54:21] 2025-10-05 06:53:23,926 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-04 23:54:21] 2025-10-05 06:53:23,961 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,962 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,962 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,962 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,962 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,962 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,962 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,962 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,962 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,962 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,962 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,962 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,962 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,962 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,962 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,968 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,968 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,968 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-04 23:54:21] 2025-10-05 06:53:23,968 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,968 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-04 23:54:21] 2025-10-05 06:53:23,968 | INFO     | job 6830895362 has completed (purged errors)
[2025-10-04 23:54:21] 2025-10-05 06:53:23,968 | INFO     | overall cleanup function is called
[2025-10-04 23:54:21] 2025-10-05 06:53:24,975 | INFO     | --- collectZombieJob: --- 10, [1209605]
[2025-10-04 23:54:21] 2025-10-05 06:53:24,975 | INFO     | zombie collector waiting for pid 1209605
[2025-10-04 23:54:21] 2025-10-05 06:53:24,975 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-04 23:54:21] 2025-10-05 06:53:24,975 | INFO     | collected zombie processes
[2025-10-04 23:54:21] 2025-10-05 06:53:24,975 | INFO     | will attempt to kill all subprocesses of pid=1209605
[2025-10-04 23:54:21] 2025-10-05 06:53:25,368 | INFO     | process IDs to be killed: [1209605] (in reverse order)
[2025-10-04 23:54:21] 2025-10-05 06:53:25,640 | WARNING  | found no corresponding commands to process id(s)
[2025-10-04 23:54:21] 2025-10-05 06:53:25,640 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-04 23:54:21] 2025-10-05 06:53:25,647 | INFO     | did not find any defunct processes belonging to 1209605
[2025-10-04 23:54:21] 2025-10-05 06:53:25,654 | INFO     | did not find any defunct processes belonging to 1209605
[2025-10-04 23:54:21] 2025-10-05 06:53:25,654 | INFO     | ready for new job
[2025-10-04 23:54:21] 2025-10-05 06:53:25,654 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-04 23:54:21] 2025-10-05 06:53:25,655 | INFO     | ***************************************
[2025-10-04 23:54:21] 2025-10-05 06:53:25,656 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-04 23:54:21] 2025-10-05 06:53:25,656 | INFO     | ***************************************
[2025-10-04 23:54:21] 2025-10-05 06:53:25,656 | INFO     | 
[2025-10-04 23:54:21] 2025-10-05 06:53:25,657 | INFO     | architecture information:
[2025-10-04 23:54:21] 2025-10-05 06:53:25,658 | INFO     | executing command: cat /etc/os-release
[2025-10-04 23:54:21] 2025-10-05 06:53:25,668 | INFO     | cat /etc/os-release:
[2025-10-04 23:54:21] NAME="CentOS Linux"
[2025-10-04 23:54:21] VERSION="7 (Core)"
[2025-10-04 23:54:21] ID="centos"
[2025-10-04 23:54:21] ID_LIKE="rhel fedora"
[2025-10-04 23:54:21] VERSION_ID="7"
[2025-10-04 23:54:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-04 23:54:21] ANSI_COLOR="0;31"
[2025-10-04 23:54:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-04 23:54:21] HOME_URL="https://www.centos.org/"
[2025-10-04 23:54:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-04 23:54:21] 
[2025-10-04 23:54:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-04 23:54:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-04 23:54:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-04 23:54:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-04 23:54:21] 
[2025-10-04 23:54:21] 2025-10-05 06:53:25,669 | INFO     | ***************************************
[2025-10-04 23:54:21] 2025-10-05 06:53:26,172 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-04 23:54:21] 2025-10-05 06:53:26,196 | INFO     | sufficient remaining disk space (982593306624 B)
[2025-10-04 23:54:21] 2025-10-05 06:53:26,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-04 23:54:21] 2025-10-05 06:53:26,197 | INFO     | current server update state: UPDATING_FINAL
[2025-10-04 23:54:21] 2025-10-05 06:53:26,197 | INFO     | update_server=False
[2025-10-04 23:54:21] 2025-10-05 06:53:26,197 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-04 23:54:21] 2025-10-05 06:53:26,197 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-04 23:54:21] 2025-10-05 06:53:26,198 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-04 23:54:21] 2025-10-05 06:53:26,198 | INFO     | aborting loop
[2025-10-04 23:54:21] 2025-10-05 06:53:26,430 | INFO     | all data control threads have been joined
[2025-10-04 23:54:21] 2025-10-05 06:53:26,709 | INFO     | all job control threads have been joined
[2025-10-04 23:54:21] 2025-10-05 06:53:26,833 | INFO     | all payload control threads have been joined
[2025-10-04 23:54:21] 2025-10-05 06:53:26,937 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-04 23:54:21] 2025-10-05 06:53:27,203 | INFO     | [job] retrieve thread has finished
[2025-10-04 23:54:21] 2025-10-05 06:53:27,204 | INFO     | [job] job monitor thread has finished
[2025-10-04 23:54:21] 2025-10-05 06:53:27,262 | INFO     | [payload] validate_post thread has finished
[2025-10-04 23:54:21] 2025-10-05 06:53:27,324 | INFO     | [data] copytool_in thread has finished
[2025-10-04 23:54:21] 2025-10-05 06:53:27,436 | INFO     | [data] control thread has finished
[2025-10-04 23:54:21] 2025-10-05 06:53:27,500 | INFO     | [payload] validate_pre thread has finished
[2025-10-04 23:54:21] 2025-10-05 06:53:27,715 | INFO     | [job] control thread has finished
[2025-10-04 23:54:21] 2025-10-05 06:53:27,834 | INFO     | [payload] failed_post thread has finished
[2025-10-04 23:54:21] 2025-10-05 06:53:27,839 | INFO     | [payload] control thread has finished
[2025-10-04 23:54:21] 2025-10-05 06:53:28,065 | INFO     | [job] validate thread has finished
[2025-10-04 23:54:21] 2025-10-05 06:53:28,121 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-04 23:54:21] 2025-10-05 06:53:28,199 | INFO     | [payload] execute_payloads thread has finished
[2025-10-04 23:54:21] 2025-10-05 06:53:28,204 | INFO     | [data] copytool_out thread has finished
[2025-10-04 23:54:21] 2025-10-05 06:53:28,466 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-04 23:54:21] 2025-10-05 06:53:28,506 | INFO     | [job] create_data_payload thread has finished
[2025-10-04 23:54:21] 2025-10-05 06:53:29,472 | INFO     | [job] queue monitor thread has finished
[2025-10-04 23:54:21] 2025-10-05 06:53:30,947 | INFO     | [data] queue_monitor thread has finished
[2025-10-04 23:54:21] 2025-10-05 06:53:56,037 | INFO     | PID=1196681 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-04 23:54:21] 2025-10-05 06:53:56,038 | INFO     | .. there are 28 such processes running
[2025-10-04 23:54:21] 2025-10-05 06:53:56,038 | INFO     | found 0 job(s) in 20 queues
[2025-10-04 23:54:21] 2025-10-05 06:53:56,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-04 23:54:21] 2025-10-05 06:53:56,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-04 23:54:21] 2025-10-05 06:54:13,659 | INFO     | [monitor] cgroup control has ended
[2025-10-04 23:54:21] 2025-10-05 06:54:15,454 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139861298579264)>', '<ExcThread(monitor, started 139860752975616)>']
[2025-10-04 23:54:21] 2025-10-05 06:54:16,156 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-04 23:54:21] 2025-10-05 06:54:16,156 | INFO     | [monitor] control thread has ended
[2025-10-04 23:54:21] 2025-10-05 06:54:20,481 | INFO     | all workflow threads have been joined
[2025-10-04 23:54:21] 2025-10-05 06:54:20,481 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-04 23:54:21] 2025-10-05 06:54:20,482 | INFO     | traces error code: 0
[2025-10-04 23:54:21] 2025-10-05 06:54:20,482 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-04 23:54:21] 2025-10-05 06:54:20,765 [wrapper] ==== pilot stdout END ====
[2025-10-04 23:54:21] 2025-10-05 06:54:20,767 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-04 23:54:21] 2025-10-05 06:54:20,785 [wrapper] pilotpid: 1196681
[2025-10-04 23:54:21] 2025-10-05 06:54:20,798 [wrapper] Pilot exit status: 0
[2025-10-04 23:54:21] 2025-10-05 06:54:20,882 [wrapper] pandaids: 6830895362
[2025-10-04 23:54:21] 2025-10-05 06:54:20,958 [wrapper] cleanup supervisor_pilot 1196696 1196682
[2025-10-04 23:54:21] 2025-10-05 06:54:20,962 [wrapper] Test setup, not cleaning
[2025-10-04 23:54:21] 2025-10-05 06:54:20,965 [wrapper] apfmon messages muted
[2025-10-04 23:54:21] 2025-10-05 06:54:20,967 [wrapper] ==== wrapper stdout END ====
[2025-10-04 23:54:21] 2025-10-05 06:54:20,968 [wrapper] ==== wrapper stderr END ====
[2025-10-04 23:54:21]  *** Error codes and diagnostics ***
[2025-10-04 23:54:21]     "exeErrorCode": 65,
[2025-10-04 23:54:21]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-04 23:54:21]     "pilotErrorCode": 1305,
[2025-10-04 23:54:21]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-04 23:54:21]  *** Listing of results directory ***
[2025-10-04 23:54:21] total 212264
[2025-10-04 23:54:21] -rw-r--r--. 1 boinc boinc    552446 Oct  4 21:22 pilot3.tar.gz
[2025-10-04 23:54:21] -rw-r--r--. 1 boinc boinc      5112 Oct  4 21:28 queuedata.json
[2025-10-04 23:54:21] -rwx------. 1 boinc boinc     36292 Oct  4 21:29 runpilot2-wrapper.sh
[2025-10-04 23:54:21] -rw-r--r--. 1 boinc boinc       100 Oct  4 23:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-04 23:54:21] -rwxr-xr-x. 1 boinc boinc      7986 Oct  4 23:49 run_atlas
[2025-10-04 23:54:21] -rw-r--r--. 1 boinc boinc       105 Oct  4 23:49 job.xml
[2025-10-04 23:54:21] -rw-r--r--. 2 boinc boinc 213262942 Oct  4 23:49 EVNT.46376901._002781.pool.root.1
[2025-10-04 23:54:21] -rw-r--r--. 1 boinc boinc      6592 Oct  4 23:49 init_data.xml
[2025-10-04 23:54:21] -rw-r--r--. 2 boinc boinc     15120 Oct  4 23:49 start_atlas.sh
[2025-10-04 23:54:21] drwxrwx--x. 2 boinc boinc      4096 Oct  4 23:49 shared
[2025-10-04 23:54:21] -rw-r--r--. 2 boinc boinc    565603 Oct  4 23:49 input.tar.gz
[2025-10-04 23:54:21] -rw-r--r--. 1 boinc boinc         0 Oct  4 23:49 boinc_lockfile
[2025-10-04 23:54:21] -rw-r--r--. 1 boinc boinc      2519 Oct  4 23:49 pandaJob.out
[2025-10-04 23:54:21] -rw-------. 1 boinc boinc    973982 Oct  4 23:50 agis_schedconf.cvmfs.json
[2025-10-04 23:54:21] -rw-------. 1 boinc boinc   1560401 Oct  4 23:50 agis_ddmendpoints.agis.ALL.json
[2025-10-04 23:54:21] drwx------. 4 boinc boinc      4096 Oct  4 23:50 pilot3
[2025-10-04 23:54:21] -rw-------. 1 boinc boinc       952 Oct  4 23:51 memory_monitor_summary.json
[2025-10-04 23:54:21] -rw-------. 1 boinc boinc     21224 Oct  4 23:51 log.46376905._076195.job.log.tgz.1
[2025-10-04 23:54:21] -rw-------. 1 boinc boinc        95 Oct  4 23:53 pilot_heartbeat.json
[2025-10-04 23:54:21] -rw-------. 1 boinc boinc      8399 Oct  4 23:53 heartbeat.json
[2025-10-04 23:54:21] -rw-r--r--. 1 boinc boinc       523 Oct  4 23:53 boinc_task_state.xml
[2025-10-04 23:54:21] -rw-r--r--. 1 boinc boinc      8192 Oct  4 23:54 boinc_mmap_file
[2025-10-04 23:54:21] -rw-r--r--. 1 boinc boinc        22 Oct  4 23:54 wrapper_checkpoint.txt
[2025-10-04 23:54:21] -rw-------. 1 boinc boinc      4822 Oct  4 23:54 pilotlog.txt
[2025-10-04 23:54:21] -rw-------. 1 boinc boinc     84781 Oct  4 23:54 log.46376905._076195.job.log.1
[2025-10-04 23:54:21] -rw-------. 1 boinc boinc       188 Oct  4 23:54 output.list
[2025-10-04 23:54:21] -rw-r--r--. 1 boinc boinc       620 Oct  4 23:54 runtime_log
[2025-10-04 23:54:21] -rw-------. 1 boinc boinc    122880 Oct  4 23:54 result.tar.gz
[2025-10-04 23:54:21] -rw-r--r--. 1 boinc boinc      8528 Oct  4 23:54 runtime_log.err
[2025-10-04 23:54:21] -rw-------. 1 boinc boinc       644 Oct  4 23:54 Q0FNDmGYVP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmt5NNDm6F1DVm.diag
[2025-10-04 23:54:21] -rw-r--r--. 1 boinc boinc     21661 Oct  4 23:54 stderr.txt
[2025-10-04 23:54:21] No HITS result produced
[2025-10-04 23:54:21]  *** Contents of shared directory: ***
[2025-10-04 23:54:21] total 208964
[2025-10-04 23:54:21] -rw-r--r--. 2 boinc boinc 213262942 Oct  4 23:49 ATLAS.root_0
[2025-10-04 23:54:21] -rw-r--r--. 2 boinc boinc     15120 Oct  4 23:49 start_atlas.sh
[2025-10-04 23:54:21] -rw-r--r--. 2 boinc boinc    565603 Oct  4 23:49 input.tar.gz
[2025-10-04 23:54:21] -rw-------. 1 boinc boinc    122880 Oct  4 23:54 result.tar.gz
23:54:23 (1191535): run_atlas exited; CPU time 22.675278
23:54:23 (1191535): called boinc_finish(0)

</stderr_txt>
]]>

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