Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:53:01 (3900408): wrapper (7.7.26015): starting
22:53:01 (3900408): wrapper: running run_atlas (--nthreads 12)
[2025-10-04 22:53:01] Arguments: --nthreads 12
[2025-10-04 22:53:01] Threads: 12
[2025-10-04 22:53:01] Checking for CVMFS
[2025-10-04 22:53:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-04 22:53:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-04 22:53:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-04 22:53:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-04 22:53:04] 2.11.5.0 2864 21019 163780 151352 1 493 31229248 45568001 20889 130560 0 166214669 99.831 81329521 25303 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-10-04 22:53:04] CVMFS is ok
[2025-10-04 22:53:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-04 22:53:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-04 22:53:04] Further information can be found at the LHC@home message board.
[2025-10-04 22:53:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-04 22:53:04] Checking for apptainer binary...
[2025-10-04 22:53:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-04 22:53:04] Running /usr/bin/apptainer --version
[2025-10-04 22:53:04] apptainer version 1.4.1-1.el9
[2025-10-04 22:53:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-04 22:53:04] wns0043.triumf.lcg
[2025-10-04 22:53:04] apptainer works
[2025-10-04 22:53:05] Set ATHENA_PROC_NUMBER=12
[2025-10-04 22:53:05] Set ATHENA_CORE_NUMBER=12
[2025-10-04 22:53:05] Starting ATLAS job with PandaID=6830857135
[2025-10-04 22:53:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-04 22:58:39]  *** The last 200 lines of the pilot log: ***
[2025-10-04 22:58:40] 2025-10-05 05:57:51,909 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-04 22:58:40] 2025-10-05 05:57:51,910 | WARNING  | wrong length of table data, x=[1759643692.0], y=[1477.0] (must be same and length>=4)
[2025-10-04 22:58:40] 2025-10-05 05:57:51,911 | INFO     | could have reported an average CPU frequency of 1438 MHz (4 samples)
[2025-10-04 22:58:40] 2025-10-05 05:57:51,911 | INFO     | ..............................
[2025-10-04 22:58:40] 2025-10-05 05:57:51,911 | INFO     | . Timing measurements:
[2025-10-04 22:58:40] 2025-10-05 05:57:51,911 | INFO     | . get job = 0 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | . initial setup = 3 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | . payload setup = 26 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | . stage-in = 0 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | . payload execution = 39 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | . stage-out = 2 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | . log creation = 0 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | ..............................
[2025-10-04 22:58:40] 2025-10-05 05:57:51,913 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-04 22:58:40] 2025-10-05 05:57:51,913 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6830857135/pilotlog.txt
[2025-10-04 22:58:40] 2025-10-05 05:57:51,944 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-04 22:58:40] - Log from pilotlog.txt -
[2025-10-04 22:58:40] 2025-10-05 05:57:51,907 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6830857135/memory_monitor_summary.json (trf name=prmon)
[2025-10-04 22:58:40] 2025-10-05 05:57:51,908 | INFO     | extracted standard info from prmon json
[2025-10-04 22:58:40] 2025-10-05 05:57:51,908 | INFO     | extracted standard memory fields from prmon json
[2025-10-04 22:58:40] 2025-10-05 05:57:51,908 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-04 22:58:40] 2025-10-05 05:57:51,909 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-04 22:58:40] 2025-10-05 05:57:51,909 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-04 22:58:40] 2025-10-05 05:57:51,910 | WARNING  | wrong length of table data, x=[1759643692.0], y=[1477.0] (must be same and length>=4)
[2025-10-04 22:58:40] 2025-10-05 05:57:51,911 | INFO     | could have reported an average CPU frequency of 1438 MHz (4 samples)
[2025-10-04 22:58:40] 2025-10-05 05:57:51,911 | INFO     | ..............................
[2025-10-04 22:58:40] 2025-10-05 05:57:51,911 | INFO     | . Timing measurements:
[2025-10-04 22:58:40] 2025-10-05 05:57:51,911 | INFO     | . get job = 0 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | . initial setup = 3 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | . payload setup = 26 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | . stage-in = 0 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | . payload execution = 39 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | . stage-out = 2 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | . log creation = 0 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | ..............................
[2025-10-04 22:58:40] 2025-10-05 05:57:51,913 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-04 22:58:40] 2025-10-05 05:57:51,913 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6830857135/pilotlog.txt
[2025-10-04 22:58:40] 2025-10-05 05:57:51,945 | WARNING  | 
[2025-10-04 22:58:40] [begin log extracts]
[2025-10-04 22:58:40] - Log from pilotlog.txt -
[2025-10-04 22:58:40] 2025-10-05 05:57:51,907 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6830857135/memory_monitor_summary.json (trf name=prmon)
[2025-10-04 22:58:40] 2025-10-05 05:57:51,908 | INFO     | extracted standard info from prmon json
[2025-10-04 22:58:40] 2025-10-05 05:57:51,908 | INFO     | extracted standard memory fields from prmon json
[2025-10-04 22:58:40] 2025-10-05 05:57:51,908 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-04 22:58:40] 2025-10-05 05:57:51,909 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-04 22:58:40] 2025-10-05 05:57:51,909 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-04 22:58:40] 2025-10-05 05:57:51,910 | WARNING  | wrong length of table data, x=[1759643692.0], y=[1477.0] (must be same and length>=4)
[2025-10-04 22:58:40] 2025-10-05 05:57:51,911 | INFO     | could have reported an average CPU frequency of 1438 MHz (4 samples)
[2025-10-04 22:58:40] 2025-10-05 05:57:51,911 | INFO     | ..............................
[2025-10-04 22:58:40] 2025-10-05 05:57:51,911 | INFO     | . Timing measurements:
[2025-10-04 22:58:40] 2025-10-05 05:57:51,911 | INFO     | . get job = 0 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | . initial setup = 3 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | . payload setup = 26 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | . stage-in = 0 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | . payload execution = 39 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | . stage-out = 2 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | . log creation = 0 s
[2025-10-04 22:58:40] 2025-10-05 05:57:51,912 | INFO     | ..............................
[2025-10-04 22:58:40] 2025-10-05 05:57:51,913 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-04 22:58:40] 2025-10-05 05:57:51,913 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6830857135/pilotlog.txt
[2025-10-04 22:58:40] [end log extracts]
[2025-10-04 22:58:40] 2025-10-05 05:57:51,946 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-04 22:58:40] 2025-10-05 05:57:51,955 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-04 22:58:40] 2025-10-05 05:57:52,438 | INFO     | time since job start (259s) is within the limit (172800.0s)
[2025-10-04 22:58:40] 2025-10-05 05:57:52,439 | INFO     | 263s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-04 22:58:40] 2025-10-05 05:57:52,532 | INFO     | 
[2025-10-04 22:58:40] 2025-10-05 05:57:52,532 | INFO     | job summary report
[2025-10-04 22:58:40] 2025-10-05 05:57:52,533 | INFO     | --------------------------------------------------
[2025-10-04 22:58:40] 2025-10-05 05:57:52,533 | INFO     | PanDA job id: 6830857135
[2025-10-04 22:58:40] 2025-10-05 05:57:52,533 | INFO     | task id: 46376905
[2025-10-04 22:58:40] 2025-10-05 05:57:52,533 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-04 22:55:11,391 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-04 22:58:40] 2025-10-05 05:57:52,533 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-04 22:58:40] 2025-10-05 05:57:52,533 | INFO     | pilot state: failed 
[2025-10-04 22:58:40] 2025-10-05 05:57:52,533 | INFO     | transexitcode: 65
[2025-10-04 22:58:40] 2025-10-05 05:57:52,534 | INFO     | exeerrorcode: 65
[2025-10-04 22:58:40] 2025-10-05 05:57:52,534 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-04 22:58:40] 2025-10-05 05:57:52,534 | INFO     | exitcode: 65
[2025-10-04 22:58:40] 2025-10-05 05:57:52,534 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-04 22:58:40] 2025-10-05 05:57:52,534 | INFO     | cpuconsumptiontime: 22 s
[2025-10-04 22:58:40] 2025-10-05 05:57:52,534 | INFO     | nevents: 0
[2025-10-04 22:58:40] 2025-10-05 05:57:52,534 | INFO     | neventsw: 0
[2025-10-04 22:58:40] 2025-10-05 05:57:52,534 | INFO     | pid: 3910901
[2025-10-04 22:58:40] 2025-10-05 05:57:52,535 | INFO     | pgrp: 3910901
[2025-10-04 22:58:40] 2025-10-05 05:57:52,535 | INFO     | corecount: 12
[2025-10-04 22:58:40] 2025-10-05 05:57:52,553 | INFO     | event service: False
[2025-10-04 22:58:40] 2025-10-05 05:57:52,553 | INFO     | sizes: {0: 2347936, 1: 2348618, 2: 2348789, 3: 2348845, 15: 2348845, 20: 2349135, 25: 2349291, 70: 2372599, 73: 2376891, 76: 2376919, 219: 2377113}
[2025-10-04 22:58:40] 2025-10-05 05:57:52,553 | INFO     | --------------------------------------------------
[2025-10-04 22:58:40] 2025-10-05 05:57:52,554 | INFO     | 
[2025-10-04 22:58:40] 2025-10-05 05:57:52,554 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-04 22:58:40] 2025-10-05 05:57:52,751 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-04 22:58:40] 2025-10-05 05:57:52,751 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-04 22:58:40] 2025-10-05 05:57:52,751 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-04 22:58:40] 2025-10-05 05:57:52,752 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-04 22:58:40] 2025-10-05 05:57:52,752 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-04 22:58:40] 2025-10-05 05:57:52,752 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-04 22:58:40] 2025-10-05 05:57:52,752 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-04 22:58:40] 2025-10-05 05:57:52,752 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-04 22:58:40] 2025-10-05 05:57:52,752 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-04 22:58:40] 2025-10-05 05:57:52,752 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-04 22:58:40] 2025-10-05 05:57:52,753 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-04 22:58:40] 2025-10-05 05:57:52,753 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-04 22:58:40] 2025-10-05 05:57:52,753 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-04 22:58:40] 2025-10-05 05:57:52,753 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-04 22:58:40] 2025-10-05 05:57:52,753 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-04 22:58:40] 2025-10-05 05:57:52,753 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-04 22:58:40] 2025-10-05 05:57:52,753 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-04 22:58:40] 2025-10-05 05:57:52,754 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-04 22:58:40] 2025-10-05 05:57:52,754 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-04 22:58:40] 2025-10-05 05:57:52,754 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-04 22:58:40] 2025-10-05 05:57:52,754 | INFO     | job 6830857135 has completed (purged errors)
[2025-10-04 22:58:40] 2025-10-05 05:57:52,755 | INFO     | overall cleanup function is called
[2025-10-04 22:58:40] 2025-10-05 05:57:53,783 | INFO     | --- collectZombieJob: --- 10, [3910901]
[2025-10-04 22:58:40] 2025-10-05 05:57:53,783 | INFO     | zombie collector waiting for pid 3910901
[2025-10-04 22:58:40] 2025-10-05 05:57:53,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-04 22:58:40] 2025-10-05 05:57:53,784 | INFO     | collected zombie processes
[2025-10-04 22:58:40] 2025-10-05 05:57:53,784 | INFO     | will attempt to kill all subprocesses of pid=3910901
[2025-10-04 22:58:40] 2025-10-05 05:57:54,728 | INFO     | process IDs to be killed: [3910901] (in reverse order)
[2025-10-04 22:58:40] 2025-10-05 05:57:54,878 | WARNING  | found no corresponding commands to process id(s)
[2025-10-04 22:58:40] 2025-10-05 05:57:54,878 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-04 22:58:40] 2025-10-05 05:57:54,886 | INFO     | did not find any defunct processes belonging to 3910901
[2025-10-04 22:58:40] 2025-10-05 05:57:54,903 | INFO     | did not find any defunct processes belonging to 3910901
[2025-10-04 22:58:40] 2025-10-05 05:57:54,903 | INFO     | ready for new job
[2025-10-04 22:58:40] 2025-10-05 05:57:54,903 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-04 22:58:40] 2025-10-05 05:57:54,911 | INFO     | ***************************************
[2025-10-04 22:58:40] 2025-10-05 05:57:54,911 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-04 22:58:40] 2025-10-05 05:57:54,912 | INFO     | ***************************************
[2025-10-04 22:58:40] 2025-10-05 05:57:54,912 | INFO     | 
[2025-10-04 22:58:40] 2025-10-05 05:57:54,913 | INFO     | architecture information:
[2025-10-04 22:58:40] 2025-10-05 05:57:54,914 | INFO     | executing command: cat /etc/os-release
[2025-10-04 22:58:40] 2025-10-05 05:57:54,963 | INFO     | cat /etc/os-release:
[2025-10-04 22:58:40] NAME="CentOS Linux"
[2025-10-04 22:58:40] VERSION="7 (Core)"
[2025-10-04 22:58:40] ID="centos"
[2025-10-04 22:58:40] ID_LIKE="rhel fedora"
[2025-10-04 22:58:40] VERSION_ID="7"
[2025-10-04 22:58:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-04 22:58:40] ANSI_COLOR="0;31"
[2025-10-04 22:58:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-04 22:58:40] HOME_URL="https://www.centos.org/"
[2025-10-04 22:58:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-04 22:58:40] 
[2025-10-04 22:58:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-04 22:58:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-04 22:58:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-04 22:58:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-04 22:58:40] 
[2025-10-04 22:58:40] 2025-10-05 05:57:54,963 | INFO     | ***************************************
[2025-10-04 22:58:40] 2025-10-05 05:57:55,467 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-04 22:58:40] 2025-10-05 05:57:55,599 | INFO     | sufficient remaining disk space (1906846990336 B)
[2025-10-04 22:58:40] 2025-10-05 05:57:55,599 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-04 22:58:40] 2025-10-05 05:57:55,600 | INFO     | current server update state: UPDATING_FINAL
[2025-10-04 22:58:40] 2025-10-05 05:57:55,600 | INFO     | update_server=False
[2025-10-04 22:58:40] 2025-10-05 05:57:55,600 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-04 22:58:40] 2025-10-05 05:57:55,600 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-04 22:58:40] 2025-10-05 05:57:55,671 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-04 22:58:40] 2025-10-05 05:57:55,671 | INFO     | aborting loop
[2025-10-04 22:58:40] 2025-10-05 05:57:55,825 | INFO     | all job control threads have been joined
[2025-10-04 22:58:40] 2025-10-05 05:57:55,897 | INFO     | all data control threads have been joined
[2025-10-04 22:58:40] 2025-10-05 05:57:56,606 | INFO     | [job] retrieve thread has finished
[2025-10-04 22:58:40] 2025-10-05 05:57:56,677 | INFO     | [job] job monitor thread has finished
[2025-10-04 22:58:40] 2025-10-05 05:57:56,721 | INFO     | all payload control threads have been joined
[2025-10-04 22:58:40] 2025-10-05 05:57:56,831 | INFO     | [job] control thread has finished
[2025-10-04 22:58:40] 2025-10-05 05:57:56,903 | INFO     | [data] control thread has finished
[2025-10-04 22:58:40] 2025-10-05 05:57:57,097 | INFO     | [payload] validate_post thread has finished
[2025-10-04 22:58:40] 2025-10-05 05:57:57,300 | INFO     | [job] validate thread has finished
[2025-10-04 22:58:40] 2025-10-05 05:57:57,432 | INFO     | [payload] failed_post thread has finished
[2025-10-04 22:58:40] 2025-10-05 05:57:57,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-04 22:58:40] 2025-10-05 05:57:57,607 | INFO     | [data] copytool_out thread has finished
[2025-10-04 22:58:40] 2025-10-05 05:57:57,623 | INFO     | [data] copytool_in thread has finished
[2025-10-04 22:58:40] 2025-10-05 05:57:57,717 | INFO     | [payload] validate_pre thread has finished
[2025-10-04 22:58:40] 2025-10-05 05:57:57,727 | INFO     | [payload] control thread has finished
[2025-10-04 22:58:40] 2025-10-05 05:57:57,837 | INFO     | [payload] execute_payloads thread has finished
[2025-10-04 22:58:40] 2025-10-05 05:57:57,867 | INFO     | [job] create_data_payload thread has finished
[2025-10-04 22:58:40] 2025-10-05 05:57:58,001 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-04 22:58:40] 2025-10-05 05:57:58,540 | INFO     | [job] queue monitor thread has finished
[2025-10-04 22:58:40] 2025-10-05 05:57:59,087 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-04 22:58:40] 2025-10-05 05:58:03,105 | INFO     | [data] queue_monitor thread has finished
[2025-10-04 22:58:40] 2025-10-05 05:58:26,017 | INFO     | PID=3904109 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-04 22:58:40] 2025-10-05 05:58:26,017 | INFO     | .. there are 35 such processes running
[2025-10-04 22:58:40] 2025-10-05 05:58:26,018 | INFO     | found 0 job(s) in 20 queues
[2025-10-04 22:58:40] 2025-10-05 05:58:26,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-04 22:58:40] 2025-10-05 05:58:26,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-04 22:58:40] 2025-10-05 05:58:33,014 | INFO     | [monitor] cgroup control has ended
[2025-10-04 22:58:40] 2025-10-05 05:58:33,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816129517376)>', '<ExcThread(monitor, started 139815597102848)>']
[2025-10-04 22:58:40] 2025-10-05 05:58:34,068 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-04 22:58:40] 2025-10-05 05:58:34,068 | INFO     | [monitor] control thread has ended
[2025-10-04 22:58:40] 2025-10-05 05:58:38,657 | INFO     | all workflow threads have been joined
[2025-10-04 22:58:40] 2025-10-05 05:58:38,657 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-04 22:58:40] 2025-10-05 05:58:38,657 | INFO     | traces error code: 0
[2025-10-04 22:58:40] 2025-10-05 05:58:38,657 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-04 22:58:40] 2025-10-05 05:58:38,844 [wrapper] ==== pilot stdout END ====
[2025-10-04 22:58:40] 2025-10-05 05:58:38,846 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-04 22:58:40] 2025-10-05 05:58:38,847 [wrapper] pilotpid: 3904109
[2025-10-04 22:58:40] 2025-10-05 05:58:38,849 [wrapper] Pilot exit status: 0
[2025-10-04 22:58:40] 2025-10-05 05:58:38,900 [wrapper] pandaids: 6830857135
[2025-10-04 22:58:40] 2025-10-05 05:58:39,313 [wrapper] cleanup supervisor_pilot 3904115 3904110
[2025-10-04 22:58:40] 2025-10-05 05:58:39,331 [wrapper] Test setup, not cleaning
[2025-10-04 22:58:40] 2025-10-05 05:58:39,360 [wrapper] apfmon messages muted
[2025-10-04 22:58:40] 2025-10-05 05:58:39,381 [wrapper] ==== wrapper stdout END ====
[2025-10-04 22:58:40] 2025-10-05 05:58:39,397 [wrapper] ==== wrapper stderr END ====
[2025-10-04 22:58:40]  *** Error codes and diagnostics ***
[2025-10-04 22:58:40]     "exeErrorCode": 65,
[2025-10-04 22:58:40]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-04 22:58:40]     "pilotErrorCode": 1305,
[2025-10-04 22:58:40]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-04 22:58:40]  *** Listing of results directory ***
[2025-10-04 22:58:40] total 212888
[2025-10-04 22:58:40] -rw-r--r--. 1 boinc boinc    552446 Oct  4 20:27 pilot3.tar.gz
[2025-10-04 22:58:40] -rw-r--r--. 1 boinc boinc      5112 Oct  4 20:40 queuedata.json
[2025-10-04 22:58:40] -rwx------. 1 boinc boinc     36292 Oct  4 20:41 runpilot2-wrapper.sh
[2025-10-04 22:58:40] -rw-r--r--. 1 boinc boinc       100 Oct  4 22:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-04 22:58:40] -rwxr-xr-x. 1 boinc boinc      7986 Oct  4 22:53 run_atlas
[2025-10-04 22:58:40] -rw-r--r--. 1 boinc boinc       105 Oct  4 22:53 job.xml
[2025-10-04 22:58:40] -rw-r--r--. 2 boinc boinc 213885155 Oct  4 22:53 EVNT.46376901._000923.pool.root.1
[2025-10-04 22:58:40] -rw-r--r--. 1 boinc boinc      6594 Oct  4 22:53 init_data.xml
[2025-10-04 22:58:40] -rw-r--r--. 2 boinc boinc     15120 Oct  4 22:53 start_atlas.sh
[2025-10-04 22:58:40] drwxrwx--x. 2 boinc boinc      4096 Oct  4 22:53 shared
[2025-10-04 22:58:40] -rw-r--r--. 2 boinc boinc    565612 Oct  4 22:53 input.tar.gz
[2025-10-04 22:58:40] -rw-r--r--. 1 boinc boinc         0 Oct  4 22:53 boinc_lockfile
[2025-10-04 22:58:40] -rw-r--r--. 1 boinc boinc      2518 Oct  4 22:53 pandaJob.out
[2025-10-04 22:58:40] -rw-------. 1 boinc boinc    973982 Oct  4 22:53 agis_schedconf.cvmfs.json
[2025-10-04 22:58:40] -rw-------. 1 boinc boinc   1560401 Oct  4 22:53 agis_ddmendpoints.agis.ALL.json
[2025-10-04 22:58:40] drwx------. 4 boinc boinc      4096 Oct  4 22:53 pilot3
[2025-10-04 22:58:40] -rw-------. 1 boinc boinc       964 Oct  4 22:55 memory_monitor_summary.json
[2025-10-04 22:58:40] -rw-------. 1 boinc boinc     21894 Oct  4 22:55 log.46376905._075031.job.log.tgz.1
[2025-10-04 22:58:40] -rw-------. 1 boinc boinc        95 Oct  4 22:57 pilot_heartbeat.json
[2025-10-04 22:58:40] -rw-------. 1 boinc boinc      8397 Oct  4 22:57 heartbeat.json
[2025-10-04 22:58:40] -rw-r--r--. 1 boinc boinc       525 Oct  4 22:58 boinc_task_state.xml
[2025-10-04 22:58:40] -rw-r--r--. 1 boinc boinc        23 Oct  4 22:58 wrapper_checkpoint.txt
[2025-10-04 22:58:40] -rw-------. 1 boinc boinc      4823 Oct  4 22:58 pilotlog.txt
[2025-10-04 22:58:40] -rw-------. 1 boinc boinc     93646 Oct  4 22:58 log.46376905._075031.job.log.1
[2025-10-04 22:58:40] -rw-------. 1 boinc boinc       188 Oct  4 22:58 output.list
[2025-10-04 22:58:40] -rw-r--r--. 1 boinc boinc       620 Oct  4 22:58 runtime_log
[2025-10-04 22:58:40] -rw-------. 1 boinc boinc    133120 Oct  4 22:58 result.tar.gz
[2025-10-04 22:58:40] -rw-r--r--. 1 boinc boinc      8528 Oct  4 22:58 runtime_log.err
[2025-10-04 22:58:40] -rw-------. 1 boinc boinc       643 Oct  4 22:58 nHHMDm4nUP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZpNNDmaCtUrn.diag
[2025-10-04 22:58:40] -rw-r--r--. 1 boinc boinc      8192 Oct  4 22:58 boinc_mmap_file
[2025-10-04 22:58:40] -rw-r--r--. 1 boinc boinc     21881 Oct  4 22:58 stderr.txt
[2025-10-04 22:58:40] No HITS result produced
[2025-10-04 22:58:40]  *** Contents of shared directory: ***
[2025-10-04 22:58:40] total 209580
[2025-10-04 22:58:40] -rw-r--r--. 2 boinc boinc 213885155 Oct  4 22:53 ATLAS.root_0
[2025-10-04 22:58:40] -rw-r--r--. 2 boinc boinc     15120 Oct  4 22:53 start_atlas.sh
[2025-10-04 22:58:40] -rw-r--r--. 2 boinc boinc    565612 Oct  4 22:53 input.tar.gz
[2025-10-04 22:58:40] -rw-------. 1 boinc boinc    133120 Oct  4 22:58 result.tar.gz
22:58:42 (3900408): run_atlas exited; CPU time 32.766588
22:58:42 (3900408): called boinc_finish(0)

</stderr_txt>
]]>

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