Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:17:40 (10594): wrapper (7.7.26015): starting
05:17:40 (10594): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 05:17:40] Arguments: --nthreads 8
[2025-10-07 05:17:40] Threads: 8
[2025-10-07 05:17:40] Checking for CVMFS
[2025-10-07 05:17:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 05:17:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 05:17:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 05:17:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 05:17:43] 2.11.2.0 9407 212646 137988 151422 3 13 22051889 25165824 4632 130560 0 101670626 99.859 62646590 3097 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-07 05:17:43] CVMFS is ok
[2025-10-07 05:17:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 05:17:43] Checking for apptainer binary...
[2025-10-07 05:17:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 05:17:43] Running /usr/bin/apptainer --version
[2025-10-07 05:17:43] apptainer version 1.3.2-1.el7
[2025-10-07 05:17:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 05:18:02] cg-vwn416.simple-grid.lan
[2025-10-07 05:18:02] apptainer works
[2025-10-07 05:18:03] Set ATHENA_PROC_NUMBER=8
[2025-10-07 05:18:03] Set ATHENA_CORE_NUMBER=8
[2025-10-07 05:18:03] Starting ATLAS job with PandaID=6830323629
[2025-10-07 05:18:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 09:03:56]  *** The last 200 lines of the pilot log: ***
[2025-10-07 09:03:56] 2025-10-07 07:02:50,177 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 09:03:56] 2025-10-07 07:02:50,177 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 09:03:56] 2025-10-07 07:02:50,187 | INFO     | fitting pss+swap vs Time
[2025-10-07 09:03:56] 2025-10-07 07:02:50,187 | INFO     | sum of square deviations: 3168461268.0
[2025-10-07 09:03:56] 2025-10-07 07:02:50,189 | INFO     | sum of deviations: -29329694687.0
[2025-10-07 09:03:56] 2025-10-07 07:02:50,189 | INFO     | mean x: 1759813857.0
[2025-10-07 09:03:56] 2025-10-07 07:02:50,189 | INFO     | mean y: 2504521.6175115206
[2025-10-07 09:03:56] 2025-10-07 07:02:50,189 | INFO     | -- intersect: 16292684128.055384
[2025-10-07 09:03:56] 2025-10-07 07:02:50,189 | INFO     | intersect: 16292684128.055384
[2025-10-07 09:03:56] 2025-10-07 07:02:50,190 | INFO     | chi2: 2.5232751855688638
[2025-10-07 09:03:56] 2025-10-07 07:02:50,190 | INFO     | sum of square deviations: 2954447953.0
[2025-10-07 09:03:56] 2025-10-07 07:02:50,192 | INFO     | sum of deviations: -14221395734.999994
[2025-10-07 09:03:56] 2025-10-07 07:02:50,192 | INFO     | mean x: 1759813704.5
[2025-10-07 09:03:56] 2025-10-07 07:02:50,192 | INFO     | mean y: 2515097.0754716983
[2025-10-07 09:03:56] 2025-10-07 07:02:50,192 | INFO     | -- intersect: 8473473973.219478
[2025-10-07 09:03:56] 2025-10-07 07:02:50,192 | INFO     | intersect: 8473473973.219478
[2025-10-07 09:03:56] 2025-10-07 07:02:50,193 | INFO     | chi2: 1.7555062323381085
[2025-10-07 09:03:56] 2025-10-07 07:02:50,193 | INFO     | current chi2=1.7555062323381085 (change=30.427476068475833 %)
[2025-10-07 09:03:56] 2025-10-07 07:02:50,193 | INFO     | sum of square deviations: 2750295288.0
[2025-10-07 09:03:56] 2025-10-07 07:02:50,195 | INFO     | sum of deviations: -13673375212.000006
[2025-10-07 09:03:56] 2025-10-07 07:02:50,195 | INFO     | mean x: 1759813552.0
[2025-10-07 09:03:56] 2025-10-07 07:02:50,195 | INFO     | mean y: 2515506.5169082126
[2025-10-07 09:03:56] 2025-10-07 07:02:50,195 | INFO     | -- intersect: 8751609141.897663
[2025-10-07 09:03:56] 2025-10-07 07:02:50,195 | INFO     | intersect: 8751609141.897663
[2025-10-07 09:03:56] 2025-10-07 07:02:50,196 | INFO     | chi2: 1.754491002369847
[2025-10-07 09:03:56] 2025-10-07 07:02:50,196 | INFO     | current chi2=1.754491002369847 (change=0.057831179950262955 %)
[2025-10-07 09:03:56] 2025-10-07 07:02:50,196 | INFO     | right removable region: 206
[2025-10-07 09:03:56] 2025-10-07 07:02:50,196 | INFO     | sum of square deviations: 2954447953.0
[2025-10-07 09:03:56] 2025-10-07 07:02:50,198 | INFO     | sum of deviations: -63183737109.0
[2025-10-07 09:03:56] 2025-10-07 07:02:50,198 | INFO     | mean x: 1759814009.5
[2025-10-07 09:03:56] 2025-10-07 07:02:50,198 | INFO     | mean y: 2528395.650943396
[2025-10-07 09:03:56] 2025-10-07 07:02:50,198 | INFO     | -- intersect: 37637859092.22904
[2025-10-07 09:03:56] 2025-10-07 07:02:50,198 | INFO     | intersect: 37637859092.22904
[2025-10-07 09:03:56] 2025-10-07 07:02:50,199 | INFO     | chi2: 1.0013606472696206
[2025-10-07 09:03:56] 2025-10-07 07:02:50,199 | INFO     | current chi2=1.0013606472696206 (change=60.31504399533548 %)
[2025-10-07 09:03:56] 2025-10-07 07:02:50,199 | INFO     | sum of square deviations: 2750295288.0
[2025-10-07 09:03:56] 2025-10-07 07:02:50,201 | INFO     | sum of deviations: -59587951016.0
[2025-10-07 09:03:56] 2025-10-07 07:02:50,201 | INFO     | mean x: 1759814162.0
[2025-10-07 09:03:56] 2025-10-07 07:02:50,201 | INFO     | mean y: 2525680.579710145
[2025-10-07 09:03:56] 2025-10-07 07:02:50,201 | INFO     | -- intersect: 38130693423.16979
[2025-10-07 09:03:56] 2025-10-07 07:02:50,201 | INFO     | intersect: 38130693423.16979
[2025-10-07 09:03:56] 2025-10-07 07:02:50,202 | INFO     | chi2: 0.9922897443737912
[2025-10-07 09:03:56] 2025-10-07 07:02:50,202 | INFO     | current chi2=0.9922897443737912 (change=0.9058577367267926 %)
[2025-10-07 09:03:56] 2025-10-07 07:02:50,202 | INFO     | left removable region: 20
[2025-10-07 09:03:56] 2025-10-07 07:02:50,202 | INFO     | sum of square deviations: 1995283922.5
[2025-10-07 09:03:56] 2025-10-07 07:02:50,203 | INFO     | sum of deviations: -30660901255.5
[2025-10-07 09:03:56] 2025-10-07 07:02:50,204 | INFO     | mean x: 1759814131.5
[2025-10-07 09:03:56] 2025-10-07 07:02:50,204 | INFO     | mean y: 2527346.8870967743
[2025-10-07 09:03:56] 2025-10-07 07:02:50,204 | INFO     | -- intersect: 27045038292.571815
[2025-10-07 09:03:56] 2025-10-07 07:02:50,204 | INFO     | intersect: 27045038292.571815
[2025-10-07 09:03:56] 2025-10-07 07:02:50,204 | INFO     | chi2: 0.1761385662956417
[2025-10-07 09:03:56] 2025-10-07 07:02:50,204 | INFO     | -- intersect: 27045038292.571815
[2025-10-07 09:03:56] 2025-10-07 07:02:50,204 | INFO     | current memory leak: -15.37 B/s (using 186 data points, chi2=0.18)
[2025-10-07 09:03:56] 2025-10-07 07:02:50,205 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-10-07 09:03:56] 2025-10-07 07:02:50,205 | INFO     | ..............................
[2025-10-07 09:03:56] 2025-10-07 07:02:50,205 | INFO     | . Timing measurements:
[2025-10-07 09:03:56] 2025-10-07 07:02:50,205 | INFO     | . get job = 0 s
[2025-10-07 09:03:56] 2025-10-07 07:02:50,206 | INFO     | . initial setup = 2 s
[2025-10-07 09:03:56] 2025-10-07 07:02:50,206 | INFO     | . payload setup = 10 s
[2025-10-07 09:03:56] 2025-10-07 07:02:50,206 | INFO     | . stage-in = 0 s
[2025-10-07 09:03:56] 2025-10-07 07:02:50,206 | INFO     | . payload execution = 13210 s
[2025-10-07 09:03:56] 2025-10-07 07:02:50,206 | INFO     | . stage-out = 4 s
[2025-10-07 09:03:56] 2025-10-07 07:02:50,206 | INFO     | . log creation = 1 s
[2025-10-07 09:03:56] 2025-10-07 07:02:50,206 | INFO     | ..............................
[2025-10-07 09:03:56] 2025-10-07 07:02:50,320 | INFO     | 
[2025-10-07 09:03:56] 2025-10-07 07:02:50,320 | INFO     | job summary report
[2025-10-07 09:03:56] 2025-10-07 07:02:50,320 | INFO     | --------------------------------------------------
[2025-10-07 09:03:56] 2025-10-07 07:02:50,320 | INFO     | PanDA job id: 6830323629
[2025-10-07 09:03:56] 2025-10-07 07:02:50,320 | INFO     | task id: 46376905
[2025-10-07 09:03:56] 2025-10-07 07:02:50,320 | INFO     | errors: (none)
[2025-10-07 09:03:56] 2025-10-07 07:02:50,321 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 09:03:56] 2025-10-07 07:02:50,321 | INFO     | pilot state: finished 
[2025-10-07 09:03:56] 2025-10-07 07:02:50,321 | INFO     | transexitcode: 0
[2025-10-07 09:03:56] 2025-10-07 07:02:50,321 | INFO     | exeerrorcode: 0
[2025-10-07 09:03:56] 2025-10-07 07:02:50,321 | INFO     | exeerrordiag: 
[2025-10-07 09:03:56] 2025-10-07 07:02:50,321 | INFO     | exitcode: 0
[2025-10-07 09:03:56] 2025-10-07 07:02:50,321 | INFO     | exitmsg: OK
[2025-10-07 09:03:56] 2025-10-07 07:02:50,321 | INFO     | cpuconsumptiontime: 49961 s
[2025-10-07 09:03:56] 2025-10-07 07:02:50,321 | INFO     | nevents: 400
[2025-10-07 09:03:56] 2025-10-07 07:02:50,321 | INFO     | neventsw: 0
[2025-10-07 09:03:56] 2025-10-07 07:02:50,321 | INFO     | pid: 21010
[2025-10-07 09:03:56] 2025-10-07 07:02:50,322 | INFO     | pgrp: 21010
[2025-10-07 09:03:56] 2025-10-07 07:02:50,322 | INFO     | corecount: 8
[2025-10-07 09:03:56] 2025-10-07 07:02:50,322 | INFO     | event service: False
[2025-10-07 09:03:56] 2025-10-07 07:02:50,322 | INFO     | sizes: {0: 2348814, 1: 2348814, 10: 2349104, 12: 2349132, 13225: 2379054, 13230: 2388052, 13231: 2388236, 13325: 2388430}
[2025-10-07 09:03:56] 2025-10-07 07:02:50,322 | INFO     | --------------------------------------------------
[2025-10-07 09:03:56] 2025-10-07 07:02:50,322 | INFO     | 
[2025-10-07 09:03:56] 2025-10-07 07:02:50,322 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-10-07 09:03:56] 2025-10-07 07:02:50,866 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 09:03:56] 2025-10-07 07:02:50,866 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 09:03:56] 2025-10-07 07:02:50,867 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 09:03:56] 2025-10-07 07:02:50,867 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 09:03:56] 2025-10-07 07:02:50,867 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 09:03:56] 2025-10-07 07:02:50,867 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 09:03:56] 2025-10-07 07:02:50,867 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 09:03:56] 2025-10-07 07:02:50,867 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 09:03:56] 2025-10-07 07:02:50,867 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 09:03:56] 2025-10-07 07:02:50,867 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 09:03:56] 2025-10-07 07:02:50,867 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 09:03:56] 2025-10-07 07:02:50,868 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 09:03:56] 2025-10-07 07:02:50,868 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 09:03:56] 2025-10-07 07:02:50,868 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 09:03:56] 2025-10-07 07:02:50,868 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 09:03:56] 2025-10-07 07:02:50,868 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 09:03:56] 2025-10-07 07:02:50,868 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 09:03:56] 2025-10-07 07:02:50,868 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 09:03:56] 2025-10-07 07:02:50,868 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 09:03:56] 2025-10-07 07:02:50,868 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 09:03:56] 2025-10-07 07:02:50,868 | INFO     | job 6830323629 has completed (purged errors)
[2025-10-07 09:03:56] 2025-10-07 07:02:50,869 | INFO     | overall cleanup function is called
[2025-10-07 09:03:56] 2025-10-07 07:02:51,877 | INFO     | --- collectZombieJob: --- 10, [21010]
[2025-10-07 09:03:56] 2025-10-07 07:02:51,877 | INFO     | zombie collector waiting for pid 21010
[2025-10-07 09:03:56] 2025-10-07 07:02:51,878 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 09:03:56] 2025-10-07 07:02:51,878 | INFO     | collected zombie processes
[2025-10-07 09:03:56] 2025-10-07 07:02:51,878 | INFO     | will attempt to kill all subprocesses of pid=21010
[2025-10-07 09:03:56] 2025-10-07 07:02:52,002 | INFO     | process IDs to be killed: [21010] (in reverse order)
[2025-10-07 09:03:56] 2025-10-07 07:02:52,794 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 09:03:56] 2025-10-07 07:02:52,794 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 09:03:56] 2025-10-07 07:02:52,798 | INFO     | did not find any defunct processes belonging to 21010
[2025-10-07 09:03:56] 2025-10-07 07:02:52,801 | INFO     | did not find any defunct processes belonging to 21010
[2025-10-07 09:03:56] 2025-10-07 07:02:52,801 | INFO     | ready for new job
[2025-10-07 09:03:56] 2025-10-07 07:02:52,801 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 09:03:56] 2025-10-07 07:02:52,803 | INFO     | ***************************************
[2025-10-07 09:03:56] 2025-10-07 07:02:52,804 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 09:03:56] 2025-10-07 07:02:52,804 | INFO     | ***************************************
[2025-10-07 09:03:56] 2025-10-07 07:02:52,804 | INFO     | 
[2025-10-07 09:03:56] 2025-10-07 07:02:52,804 | INFO     | pilot is running in a VM
[2025-10-07 09:03:56] 2025-10-07 07:02:52,805 | INFO     | architecture information:
[2025-10-07 09:03:56] 2025-10-07 07:02:52,812 | INFO     | executing command: cat /etc/os-release
[2025-10-07 09:03:56] 2025-10-07 07:02:53,100 | INFO     | cat /etc/os-release:
[2025-10-07 09:03:56] NAME="CentOS Linux"
[2025-10-07 09:03:56] VERSION="7 (Core)"
[2025-10-07 09:03:56] ID="centos"
[2025-10-07 09:03:56] ID_LIKE="rhel fedora"
[2025-10-07 09:03:56] VERSION_ID="7"
[2025-10-07 09:03:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 09:03:56] ANSI_COLOR="0;31"
[2025-10-07 09:03:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 09:03:56] HOME_URL="https://www.centos.org/"
[2025-10-07 09:03:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 09:03:56] 
[2025-10-07 09:03:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 09:03:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 09:03:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 09:03:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 09:03:56] 
[2025-10-07 09:03:56] 2025-10-07 07:02:53,100 | INFO     | ***************************************
[2025-10-07 09:03:56] 2025-10-07 07:02:53,604 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-10-07 09:03:56] 2025-10-07 07:02:53,845 | INFO     | sufficient remaining disk space (496631808000 B)
[2025-10-07 09:03:56] 2025-10-07 07:02:53,845 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 09:03:56] 2025-10-07 07:02:53,845 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 09:03:56] 2025-10-07 07:02:53,845 | INFO     | update_server=False
[2025-10-07 09:03:56] 2025-10-07 07:02:53,846 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 09:03:56] 2025-10-07 07:02:53,846 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 09:03:56] 2025-10-07 07:02:53,846 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 09:03:56] 2025-10-07 07:02:53,847 | INFO     | aborting loop
[2025-10-07 09:03:56] 2025-10-07 07:02:53,854 | INFO     | all data control threads have been joined
[2025-10-07 09:03:56] 2025-10-07 07:02:54,176 | INFO     | all payload control threads have been joined
[2025-10-07 09:03:56] 2025-10-07 07:02:54,442 | INFO     | all job control threads have been joined
[2025-10-07 09:03:56] 2025-10-07 07:02:54,851 | INFO     | [job] retrieve thread has finished
[2025-10-07 09:03:56] 2025-10-07 07:02:54,852 | INFO     | [job] job monitor thread has finished
[2025-10-07 09:03:56] 2025-10-07 07:02:54,860 | INFO     | [data] control thread has finished
[2025-10-07 09:03:56] 2025-10-07 07:02:54,893 | INFO     | [data] copytool_in thread has finished
[2025-10-07 09:03:56] 2025-10-07 07:02:55,125 | INFO     | [job] validate thread has finished
[2025-10-07 09:03:56] 2025-10-07 07:02:55,181 | INFO     | [payload] control thread has finished
[2025-10-07 09:03:56] 2025-10-07 07:02:55,333 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 09:03:56] 2025-10-07 07:02:55,448 | INFO     | [job] control thread has finished
[2025-10-07 09:03:56] 2025-10-07 07:02:55,521 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 09:03:56] 2025-10-07 07:02:55,557 | INFO     | [payload] validate_post thread has finished
[2025-10-07 09:03:56] 2025-10-07 07:02:55,687 | INFO     | [payload] failed_post thread has finished
[2025-10-07 09:03:56] 2025-10-07 07:02:55,853 | INFO     | [data] copytool_out thread has finished
[2025-10-07 09:03:56] 2025-10-07 07:02:56,082 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 09:03:56] 2025-10-07 07:02:56,109 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 09:03:56] 2025-10-07 07:02:56,339 | INFO     | [job] queue monitor thread has finished
[2025-10-07 09:03:56] 2025-10-07 07:02:56,344 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 09:03:56] 2025-10-07 07:02:57,273 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 09:03:56] 2025-10-07 07:03:01,282 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 09:03:56] 2025-10-07 07:03:22,922 | INFO     | PID=14451 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 09:03:56] 2025-10-07 07:03:22,923 | INFO     | .. there are 9 such processes running
[2025-10-07 09:03:56] 2025-10-07 07:03:22,923 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 09:03:56] 2025-10-07 07:03:22,923 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 09:03:56] 2025-10-07 07:03:22,923 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 09:03:56] 2025-10-07 07:03:45,620 | INFO     | [monitor] cgroup control has ended
[2025-10-07 09:03:56] 2025-10-07 07:03:46,573 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336631125824)>', '<ExcThread(monitor, started 140335942448896)>']
[2025-10-07 09:03:56] 2025-10-07 07:03:47,065 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 09:03:56] 2025-10-07 07:03:47,065 | INFO     | [monitor] control thread has ended
[2025-10-07 09:03:56] 2025-10-07 07:03:51,599 | INFO     | all workflow threads have been joined
[2025-10-07 09:03:56] 2025-10-07 07:03:51,599 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 09:03:56] 2025-10-07 07:03:51,600 | INFO     | traces error code: 0
[2025-10-07 09:03:56] 2025-10-07 07:03:51,600 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 09:03:56] 2025-10-07 07:03:51,912 [wrapper] ==== pilot stdout END ====
[2025-10-07 09:03:56] 2025-10-07 07:03:51,959 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 09:03:56] 2025-10-07 07:03:52,017 [wrapper] pilotpid: 14451
[2025-10-07 09:03:56] 2025-10-07 07:03:52,077 [wrapper] Pilot exit status: 0
[2025-10-07 09:03:56] 2025-10-07 07:03:52,590 [wrapper] pandaids: 6830323629
[2025-10-07 09:03:56] 2025-10-07 07:03:53,369 [wrapper] cleanup supervisor_pilot 23533 14452
[2025-10-07 09:03:56] 2025-10-07 07:03:53,471 [wrapper] Test setup, not cleaning
[2025-10-07 09:03:56] 2025-10-07 07:03:53,573 [wrapper] apfmon messages muted
[2025-10-07 09:03:56] 2025-10-07 07:03:53,702 [wrapper] ==== wrapper stdout END ====
[2025-10-07 09:03:56] 2025-10-07 07:03:53,760 [wrapper] ==== wrapper stderr END ====
[2025-10-07 09:03:56]  *** Error codes and diagnostics ***
[2025-10-07 09:03:56]     "exeErrorCode": 0,
[2025-10-07 09:03:56]     "exeErrorDiag": "",
[2025-10-07 09:03:56]     "pilotErrorCode": 0,
[2025-10-07 09:03:56]     "pilotErrorDiag": "",
[2025-10-07 09:03:56]  *** Listing of results directory ***
[2025-10-07 09:03:56] total 398008
[2025-10-07 09:03:56] -rw-r--r--. 1 boinc boinc    552446 Oct  4 23:29 pilot3.tar.gz
[2025-10-07 09:03:56] -rw-r--r--. 1 boinc boinc      5112 Oct  4 23:30 queuedata.json
[2025-10-07 09:03:56] -rwx------. 1 boinc boinc     36292 Oct  4 23:32 runpilot2-wrapper.sh
[2025-10-07 09:03:56] -rw-r--r--. 1 boinc boinc       100 Oct  7 05:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 09:03:56] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 05:17 run_atlas
[2025-10-07 09:03:56] -rw-r--r--. 1 boinc boinc       105 Oct  7 05:17 job.xml
[2025-10-07 09:03:56] -rw-r--r--. 1 boinc boinc      6390 Oct  7 05:17 init_data.xml
[2025-10-07 09:03:56] -rw-r--r--. 2 boinc boinc 214312462 Oct  7 05:17 EVNT.46376901._002481.pool.root.1
[2025-10-07 09:03:56] -rw-r--r--. 2 boinc boinc     15120 Oct  7 05:17 start_atlas.sh
[2025-10-07 09:03:56] drwxrwx--x. 2 boinc boinc        68 Oct  7 05:17 shared
[2025-10-07 09:03:56] -rw-r--r--. 2 boinc boinc    565596 Oct  7 05:17 input.tar.gz
[2025-10-07 09:03:56] -rw-r--r--. 1 boinc boinc         0 Oct  7 05:17 boinc_lockfile
[2025-10-07 09:03:56] -rw-r--r--. 1 boinc boinc      2518 Oct  7 05:18 pandaJob.out
[2025-10-07 09:03:56] -rw-------. 1 boinc boinc    974984 Oct  7 05:20 agis_schedconf.cvmfs.json
[2025-10-07 09:03:56] drwx------. 4 boinc boinc      4096 Oct  7 05:20 pilot3
[2025-10-07 09:03:56] -rw-------. 1 boinc boinc 184906096 Oct  7 09:00 HITS.46376905._068406.pool.root.1
[2025-10-07 09:03:56] -rw-r--r--. 1 boinc boinc       530 Oct  7 09:00 boinc_task_state.xml
[2025-10-07 09:03:56] -rw-------. 1 boinc boinc      1021 Oct  7 09:01 memory_monitor_summary.json
[2025-10-07 09:03:56] -rw-------. 1 boinc boinc   1560401 Oct  7 09:01 agis_ddmendpoints.agis.ALL.json
[2025-10-07 09:03:56] -rw-------. 1 boinc boinc    430123 Oct  7 09:01 log.46376905._068406.job.log.tgz.1
[2025-10-07 09:03:56] -rw-------. 1 boinc boinc        95 Oct  7 09:02 pilot_heartbeat.json
[2025-10-07 09:03:56] -rw-------. 1 boinc boinc      7785 Oct  7 09:02 heartbeat.json
[2025-10-07 09:03:56] -rw-r--r--. 1 boinc boinc      8192 Oct  7 09:03 boinc_mmap_file
[2025-10-07 09:03:56] -rw-r--r--. 1 boinc boinc        28 Oct  7 09:03 wrapper_checkpoint.txt
[2025-10-07 09:03:56] -rw-------. 1 boinc boinc      4884 Oct  7 09:03 pilotlog.txt
[2025-10-07 09:03:56] -rw-------. 1 boinc boinc   1799734 Oct  7 09:03 log.46376905._068406.job.log.1
[2025-10-07 09:03:56] -rw-------. 1 boinc boinc       357 Oct  7 09:03 output.list
[2025-10-07 09:03:56] -rw-r--r--. 1 boinc boinc       620 Oct  7 09:03 runtime_log
[2025-10-07 09:03:56] -rw-------. 1 boinc boinc   2252800 Oct  7 09:03 result.tar.gz
[2025-10-07 09:03:56] -rw-------. 1 boinc boinc       657 Oct  7 09:03 zjcNDmU2OP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmzWEMDmRQr6qm.diag
[2025-10-07 09:03:56] -rw-r--r--. 1 boinc boinc      8703 Oct  7 09:03 runtime_log.err
[2025-10-07 09:03:56] -rw-r--r--. 1 boinc boinc     20563 Oct  7 09:03 stderr.txt
[2025-10-07 09:03:56] HITS file was successfully produced:
[2025-10-07 09:03:56] -rw-------. 1 boinc boinc 184906096 Oct  7 09:00 shared/HITS.pool.root.1
[2025-10-07 09:03:56]  *** Contents of shared directory: ***
[2025-10-07 09:03:56] total 392640
[2025-10-07 09:03:56] -rw-r--r--. 2 boinc boinc 214312462 Oct  7 05:17 ATLAS.root_0
[2025-10-07 09:03:56] -rw-r--r--. 2 boinc boinc     15120 Oct  7 05:17 start_atlas.sh
[2025-10-07 09:03:56] -rw-r--r--. 2 boinc boinc    565596 Oct  7 05:17 input.tar.gz
[2025-10-07 09:03:56] -rw-------. 1 boinc boinc 184906096 Oct  7 09:00 HITS.pool.root.1
[2025-10-07 09:03:56] -rw-------. 1 boinc boinc   2252800 Oct  7 09:03 result.tar.gz
09:03:57 (10594): run_atlas exited; CPU time 50126.078792
09:03:57 (10594): called boinc_finish(0)

</stderr_txt>
]]>

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