Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:21:14 (1519770): wrapper (7.7.26015): starting
13:21:14 (1519770): wrapper: running run_atlas (--nthreads 4)
[2025-10-06 13:21:14] Arguments: --nthreads 4
[2025-10-06 13:21:14] Threads: 4
[2025-10-06 13:21:14] Checking for CVMFS
[2025-10-06 13:21:14] No cvmfs_config command found, will try listing directly
[2025-10-06 13:21:14] CVMFS is ok
[2025-10-06 13:21:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 13:21:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 13:21:14] Further information can be found at the LHC@home message board.
[2025-10-06 13:21:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 13:21:14] Checking for apptainer binary...
[2025-10-06 13:21:14] which: no apptainer in ((null))
[2025-10-06 13:21:14] apptainer is not installed, using version from CVMFS
[2025-10-06 13:21:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 13:21:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-10-06 13:21:15] apptainer works
[2025-10-06 13:21:15] Set ATHENA_PROC_NUMBER=4
[2025-10-06 13:21:15] Set ATHENA_CORE_NUMBER=4
[2025-10-06 13:21:15] Starting ATLAS job with PandaID=6830642022
[2025-10-06 13:21:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:07:38 (1584076): wrapper (7.7.26015): starting
14:07:38 (1584076): wrapper: running run_atlas (--nthreads 4)
[2025-10-06 14:07:38] Arguments: --nthreads 4
[2025-10-06 14:07:38] Threads: 4
[2025-10-06 14:07:38] This job has been restarted, cleaning up previous attempt
[2025-10-06 14:07:38] Checking for CVMFS
[2025-10-06 14:07:38] No cvmfs_config command found, will try listing directly
[2025-10-06 14:07:38] CVMFS is ok
[2025-10-06 14:07:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 14:07:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 14:07:38] Further information can be found at the LHC@home message board.
[2025-10-06 14:07:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 14:07:38] Checking for apptainer binary...
[2025-10-06 14:07:38] which: no apptainer in ((null))
[2025-10-06 14:07:38] apptainer is not installed, using version from CVMFS
[2025-10-06 14:07:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 14:07:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-10-06 14:07:38] apptainer works
[2025-10-06 14:07:38] Set ATHENA_PROC_NUMBER=4
[2025-10-06 14:07:38] Set ATHENA_CORE_NUMBER=4
[2025-10-06 14:07:38] Starting ATLAS job with PandaID=6830642022
[2025-10-06 14:07:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 16:18:32]  *** The last 200 lines of the pilot log: ***
[2025-10-06 16:18:33] 2025-10-06 14:16:07,877 | INFO     | intersect: -40292843624.874016
[2025-10-06 16:18:33] 2025-10-06 14:16:07,877 | INFO     | chi2: 1.2717823281553295
[2025-10-06 16:18:33] 2025-10-06 14:16:07,877 | INFO     | sum of square deviations: 549294020.0
[2025-10-06 16:18:33] 2025-10-06 14:16:07,878 | INFO     | sum of deviations: 13524881021.000002
[2025-10-06 16:18:33] 2025-10-06 14:16:07,878 | INFO     | mean x: 1759756154.0
[2025-10-06 16:18:33] 2025-10-06 14:16:07,878 | INFO     | mean y: 2300602.619834711
[2025-10-06 16:18:33] 2025-10-06 14:16:07,878 | INFO     | -- intersect: -43326939735.40998
[2025-10-06 16:18:33] 2025-10-06 14:16:07,878 | INFO     | intersect: -43326939735.40998
[2025-10-06 16:18:33] 2025-10-06 14:16:07,878 | INFO     | chi2: 1.273548562358303
[2025-10-06 16:18:33] 2025-10-06 14:16:07,878 | INFO     | current chi2=1.273548562358303 (change=-0.1388786558730728 %)
[2025-10-06 16:18:33] 2025-10-06 14:16:07,879 | INFO     | right removable region: 120
[2025-10-06 16:18:33] 2025-10-06 14:16:07,879 | INFO     | sum of square deviations: 549294020.0
[2025-10-06 16:18:33] 2025-10-06 14:16:07,879 | INFO     | sum of deviations: -262866202.00000072
[2025-10-06 16:18:33] 2025-10-06 14:16:07,879 | INFO     | mean x: 1759756459.0
[2025-10-06 16:18:33] 2025-10-06 14:16:07,880 | INFO     | mean y: 2332440.0991735538
[2025-10-06 16:18:33] 2025-10-06 14:16:07,880 | INFO     | -- intersect: 844468855.1693758
[2025-10-06 16:18:33] 2025-10-06 14:16:07,880 | INFO     | intersect: 844468855.1693758
[2025-10-06 16:18:33] 2025-10-06 14:16:07,880 | INFO     | chi2: 0.0132732429589884
[2025-10-06 16:18:33] 2025-10-06 14:16:07,880 | INFO     | current chi2=0.0132732429589884 (change=98.95632745752643 %)
[2025-10-06 16:18:33] 2025-10-06 14:16:07,880 | INFO     | sum of square deviations: 483971865.0
[2025-10-06 16:18:33] 2025-10-06 14:16:07,881 | INFO     | sum of deviations: 1489616248.5000002
[2025-10-06 16:18:33] 2025-10-06 14:16:07,881 | INFO     | mean x: 1759756611.5
[2025-10-06 16:18:33] 2025-10-06 14:16:07,881 | INFO     | mean y: 2328400.7844827585
[2025-10-06 16:18:33] 2025-10-06 14:16:07,881 | INFO     | -- intersect: -5414023729.304117
[2025-10-06 16:18:33] 2025-10-06 14:16:07,881 | INFO     | intersect: -5414023729.304117
[2025-10-06 16:18:33] 2025-10-06 14:16:07,881 | INFO     | chi2: 0.000324997203098449
[2025-10-06 16:18:33] 2025-10-06 14:16:07,881 | INFO     | current chi2=0.000324997203098449 (change=97.55148606785377 %)
[2025-10-06 16:18:33] 2025-10-06 14:16:07,882 | INFO     | sum of square deviations: 424045160.0
[2025-10-06 16:18:33] 2025-10-06 14:16:07,882 | INFO     | sum of deviations: 1203318208.0
[2025-10-06 16:18:33] 2025-10-06 14:16:07,882 | INFO     | mean x: 1759756764.0
[2025-10-06 16:18:33] 2025-10-06 14:16:07,882 | INFO     | mean y: 2329119.603603604
[2025-10-06 16:18:33] 2025-10-06 14:16:07,882 | INFO     | -- intersect: -4991354467.711387
[2025-10-06 16:18:33] 2025-10-06 14:16:07,883 | INFO     | intersect: -4991354467.711387
[2025-10-06 16:18:33] 2025-10-06 14:16:07,883 | INFO     | chi2: 0.00019207694258175596
[2025-10-06 16:18:33] 2025-10-06 14:16:07,883 | INFO     | current chi2=0.00019207694258175596 (change=40.89889366722596 %)
[2025-10-06 16:18:33] 2025-10-06 14:16:07,883 | INFO     | sum of square deviations: 369281342.5
[2025-10-06 16:18:33] 2025-10-06 14:16:07,884 | INFO     | sum of deviations: 1026536761.4999999
[2025-10-06 16:18:33] 2025-10-06 14:16:07,884 | INFO     | mean x: 1759756916.5
[2025-10-06 16:18:33] 2025-10-06 14:16:07,884 | INFO     | mean y: 2329614.4433962265
[2025-10-06 16:18:33] 2025-10-06 14:16:07,884 | INFO     | -- intersect: -4889483099.033011
[2025-10-06 16:18:33] 2025-10-06 14:16:07,884 | INFO     | intersect: -4889483099.033011
[2025-10-06 16:18:33] 2025-10-06 14:16:07,884 | INFO     | chi2: 0.00018505587023655344
[2025-10-06 16:18:33] 2025-10-06 14:16:07,885 | INFO     | current chi2=0.00018505587023655344 (change=3.655343661154984 %)
[2025-10-06 16:18:33] 2025-10-06 14:16:07,885 | INFO     | left removable region: 40
[2025-10-06 16:18:33] 2025-10-06 14:16:07,885 | INFO     | sum of square deviations: 158737860.0
[2025-10-06 16:18:33] 2025-10-06 14:16:07,885 | INFO     | sum of deviations: 237579658.49999997
[2025-10-06 16:18:33] 2025-10-06 14:16:07,885 | INFO     | mean x: 1759757343.5
[2025-10-06 16:18:33] 2025-10-06 14:16:07,885 | INFO     | mean y: 2331636.6125
[2025-10-06 16:18:33] 2025-10-06 14:16:07,885 | INFO     | -- intersect: -2631460633.9371796
[2025-10-06 16:18:33] 2025-10-06 14:16:07,885 | INFO     | intersect: -2631460633.9371796
[2025-10-06 16:18:33] 2025-10-06 14:16:07,886 | INFO     | chi2: 4.769725399761146e-05
[2025-10-06 16:18:33] 2025-10-06 14:16:07,886 | INFO     | -- intersect: -2631460633.9371796
[2025-10-06 16:18:33] 2025-10-06 14:16:07,886 | INFO     | current memory leak: 1.50 B/s (using 80 data points, chi2=0.00)
[2025-10-06 16:18:33] 2025-10-06 14:16:07,886 | INFO     | could have reported an average CPU frequency of 2692 MHz (8 samples)
[2025-10-06 16:18:33] 2025-10-06 14:16:07,886 | INFO     | ..............................
[2025-10-06 16:18:33] 2025-10-06 14:16:07,886 | INFO     | . Timing measurements:
[2025-10-06 16:18:33] 2025-10-06 14:16:07,887 | INFO     | . get job = 0 s
[2025-10-06 16:18:33] 2025-10-06 14:16:07,887 | INFO     | . initial setup = 1 s
[2025-10-06 16:18:33] 2025-10-06 14:16:07,887 | INFO     | . payload setup = 5 s
[2025-10-06 16:18:33] 2025-10-06 14:16:07,887 | INFO     | . stage-in = 0 s
[2025-10-06 16:18:33] 2025-10-06 14:16:07,887 | INFO     | . payload execution = 7663 s
[2025-10-06 16:18:33] 2025-10-06 14:16:07,887 | INFO     | . stage-out = 0 s
[2025-10-06 16:18:33] 2025-10-06 14:16:07,887 | INFO     | . log creation = 0 s
[2025-10-06 16:18:33] 2025-10-06 14:16:07,887 | INFO     | ..............................
[2025-10-06 16:18:33] 2025-10-06 14:16:07,981 | INFO     | 
[2025-10-06 16:18:33] 2025-10-06 14:16:07,981 | INFO     | job summary report
[2025-10-06 16:18:33] 2025-10-06 14:16:07,982 | INFO     | --------------------------------------------------
[2025-10-06 16:18:33] 2025-10-06 14:16:07,982 | INFO     | PanDA job id: 6830642022
[2025-10-06 16:18:33] 2025-10-06 14:16:07,982 | INFO     | task id: 46376905
[2025-10-06 16:18:33] 2025-10-06 14:16:07,982 | INFO     | errors: (none)
[2025-10-06 16:18:33] 2025-10-06 14:16:07,982 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 16:18:33] 2025-10-06 14:16:07,982 | INFO     | pilot state: finished 
[2025-10-06 16:18:33] 2025-10-06 14:16:07,982 | INFO     | transexitcode: 0
[2025-10-06 16:18:33] 2025-10-06 14:16:07,982 | INFO     | exeerrorcode: 0
[2025-10-06 16:18:33] 2025-10-06 14:16:07,982 | INFO     | exeerrordiag: 
[2025-10-06 16:18:33] 2025-10-06 14:16:07,982 | INFO     | exitcode: 0
[2025-10-06 16:18:33] 2025-10-06 14:16:07,982 | INFO     | exitmsg: OK
[2025-10-06 16:18:33] 2025-10-06 14:16:07,983 | INFO     | cpuconsumptiontime: 29343 s
[2025-10-06 16:18:33] 2025-10-06 14:16:07,983 | INFO     | nevents: 400
[2025-10-06 16:18:33] 2025-10-06 14:16:07,983 | INFO     | neventsw: 0
[2025-10-06 16:18:33] 2025-10-06 14:16:07,983 | INFO     | pid: 1595344
[2025-10-06 16:18:33] 2025-10-06 14:16:07,983 | INFO     | pgrp: 1595344
[2025-10-06 16:18:33] 2025-10-06 14:16:07,983 | INFO     | corecount: 4
[2025-10-06 16:18:33] 2025-10-06 14:16:07,983 | INFO     | event service: False
[2025-10-06 16:18:33] 2025-10-06 14:16:07,983 | INFO     | sizes: {0: 2347938, 1: 2348805, 5: 2349067, 12: 2349123, 7673: 2376816, 7674: 2385836, 7678: 2386048, 7684: 2386242}
[2025-10-06 16:18:33] 2025-10-06 14:16:07,983 | INFO     | --------------------------------------------------
[2025-10-06 16:18:33] 2025-10-06 14:16:07,983 | INFO     | 
[2025-10-06 16:18:33] 2025-10-06 14:16:07,984 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-10-06 16:18:33] 2025-10-06 14:16:08,003 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 16:18:33] 2025-10-06 14:16:08,004 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 16:18:33] 2025-10-06 14:16:08,004 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 16:18:33] 2025-10-06 14:16:08,004 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 16:18:33] 2025-10-06 14:16:08,004 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 16:18:33] 2025-10-06 14:16:08,004 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 16:18:33] 2025-10-06 14:16:08,004 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 16:18:33] 2025-10-06 14:16:08,004 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 16:18:33] 2025-10-06 14:16:08,004 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 16:18:33] 2025-10-06 14:16:08,004 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 16:18:33] 2025-10-06 14:16:08,004 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 16:18:33] 2025-10-06 14:16:08,005 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 16:18:33] 2025-10-06 14:16:08,005 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 16:18:33] 2025-10-06 14:16:08,005 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 16:18:33] 2025-10-06 14:16:08,005 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 16:18:33] 2025-10-06 14:16:08,005 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 16:18:33] 2025-10-06 14:16:08,005 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 16:18:33] 2025-10-06 14:16:08,005 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 16:18:33] 2025-10-06 14:16:08,005 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 16:18:33] 2025-10-06 14:16:08,005 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 16:18:33] 2025-10-06 14:16:08,005 | INFO     | job 6830642022 has completed (purged errors)
[2025-10-06 16:18:33] 2025-10-06 14:16:08,006 | INFO     | overall cleanup function is called
[2025-10-06 16:18:33] 2025-10-06 14:16:09,013 | INFO     | --- collectZombieJob: --- 10, [1595344]
[2025-10-06 16:18:33] 2025-10-06 14:16:09,014 | INFO     | zombie collector waiting for pid 1595344
[2025-10-06 16:18:33] 2025-10-06 14:16:09,014 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 16:18:33] 2025-10-06 14:16:09,014 | INFO     | collected zombie processes
[2025-10-06 16:18:33] 2025-10-06 14:16:09,014 | INFO     | will attempt to kill all subprocesses of pid=1595344
[2025-10-06 16:18:33] 2025-10-06 14:16:09,354 | INFO     | process IDs to be killed: [1595344] (in reverse order)
[2025-10-06 16:18:33] 2025-10-06 14:16:09,460 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 16:18:33] 2025-10-06 14:16:09,460 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 16:18:33] 2025-10-06 14:16:09,471 | INFO     | did not find any defunct processes belonging to 1595344
[2025-10-06 16:18:33] 2025-10-06 14:16:09,482 | INFO     | did not find any defunct processes belonging to 1595344
[2025-10-06 16:18:33] 2025-10-06 14:16:09,482 | INFO     | ready for new job
[2025-10-06 16:18:33] 2025-10-06 14:16:09,482 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 16:18:33] 2025-10-06 14:16:09,484 | INFO     | ***************************************
[2025-10-06 16:18:33] 2025-10-06 14:16:09,484 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 16:18:33] 2025-10-06 14:16:09,484 | INFO     | ***************************************
[2025-10-06 16:18:33] 2025-10-06 14:16:09,484 | INFO     | 
[2025-10-06 16:18:33] 2025-10-06 14:16:09,488 | INFO     | architecture information:
[2025-10-06 16:18:33] 2025-10-06 14:16:09,488 | INFO     | executing command: cat /etc/os-release
[2025-10-06 16:18:33] 2025-10-06 14:16:09,503 | INFO     | cat /etc/os-release:
[2025-10-06 16:18:33] NAME="CentOS Linux"
[2025-10-06 16:18:33] VERSION="7 (Core)"
[2025-10-06 16:18:33] ID="centos"
[2025-10-06 16:18:33] ID_LIKE="rhel fedora"
[2025-10-06 16:18:33] VERSION_ID="7"
[2025-10-06 16:18:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 16:18:33] ANSI_COLOR="0;31"
[2025-10-06 16:18:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 16:18:33] HOME_URL="https://www.centos.org/"
[2025-10-06 16:18:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 16:18:33] 
[2025-10-06 16:18:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 16:18:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 16:18:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 16:18:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 16:18:33] 
[2025-10-06 16:18:33] 2025-10-06 14:16:09,504 | INFO     | ***************************************
[2025-10-06 16:18:33] 2025-10-06 14:16:10,007 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-10-06 16:18:33] 2025-10-06 14:16:10,021 | INFO     | sufficient remaining disk space (688337715200 B)
[2025-10-06 16:18:33] 2025-10-06 14:16:10,021 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 16:18:33] 2025-10-06 14:16:10,022 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 16:18:33] 2025-10-06 14:16:10,022 | INFO     | update_server=False
[2025-10-06 16:18:33] 2025-10-06 14:16:10,022 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 16:18:33] 2025-10-06 14:16:10,022 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 16:18:33] 2025-10-06 14:16:10,022 | INFO     | aborting loop
[2025-10-06 16:18:33] 2025-10-06 14:16:10,909 | INFO     | all data control threads have been joined
[2025-10-06 16:18:33] 2025-10-06 14:16:10,918 | INFO     | all job control threads have been joined
[2025-10-06 16:18:33] 2025-10-06 14:16:10,996 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 16:18:33] 2025-10-06 14:16:11,025 | INFO     | [job] job monitor thread has finished
[2025-10-06 16:18:33] 2025-10-06 14:16:11,027 | INFO     | [job] retrieve thread has finished
[2025-10-06 16:18:33] 2025-10-06 14:16:11,209 | INFO     | all payload control threads have been joined
[2025-10-06 16:18:33] 2025-10-06 14:16:11,212 | INFO     | [job] validate thread has finished
[2025-10-06 16:18:33] 2025-10-06 14:16:11,265 | INFO     | [payload] failed_post thread has finished
[2025-10-06 16:18:33] 2025-10-06 14:16:11,387 | INFO     | [data] copytool_in thread has finished
[2025-10-06 16:18:33] 2025-10-06 14:16:11,451 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 16:18:33] 2025-10-06 14:16:11,468 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 16:18:33] 2025-10-06 14:16:11,914 | INFO     | [data] control thread has finished
[2025-10-06 16:18:33] 2025-10-06 14:16:11,923 | INFO     | [job] control thread has finished
[2025-10-06 16:18:33] 2025-10-06 14:16:11,948 | INFO     | [payload] validate_post thread has finished
[2025-10-06 16:18:33] 2025-10-06 14:16:12,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 16:18:33] 2025-10-06 14:16:12,212 | INFO     | [payload] control thread has finished
[2025-10-06 16:18:33] 2025-10-06 14:16:12,466 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 16:18:33] 2025-10-06 14:16:12,991 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 16:18:33] 2025-10-06 14:16:13,001 | INFO     | [data] copytool_out thread has finished
[2025-10-06 16:18:33] 2025-10-06 14:16:13,996 | INFO     | [job] queue monitor thread has finished
[2025-10-06 16:18:33] 2025-10-06 14:16:16,024 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 16:18:33] 2025-10-06 14:16:20,692 | INFO     | job.realtimelogging is not enabled
[2025-10-06 16:18:33] 2025-10-06 14:16:21,698 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 16:18:33] 2025-10-06 14:16:41,120 | INFO     | PID=1587888 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 16:18:33] 2025-10-06 14:16:41,120 | INFO     | .. there are 7 such processes running
[2025-10-06 16:18:33] 2025-10-06 14:16:41,121 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 16:18:33] 2025-10-06 14:16:41,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 16:18:33] 2025-10-06 14:16:41,121 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 16:18:33] 2025-10-06 14:16:59,556 | INFO     | [monitor] cgroup control has ended
[2025-10-06 16:18:33] 2025-10-06 14:17:00,568 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22991752603456)>', '<ExcThread(monitor, started 22991517742848)>']
[2025-10-06 16:18:33] 2025-10-06 14:17:01,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 16:18:33] 2025-10-06 14:17:01,207 | INFO     | [monitor] control thread has ended
[2025-10-06 16:18:33] 2025-10-06 14:17:05,586 | INFO     | all workflow threads have been joined
[2025-10-06 16:18:33] 2025-10-06 14:17:05,586 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 16:18:33] 2025-10-06 14:17:05,586 | INFO     | traces error code: 0
[2025-10-06 16:18:33] 2025-10-06 14:17:05,586 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 16:18:33] 2025-10-06 14:17:05,765 [wrapper] ==== pilot stdout END ====
[2025-10-06 16:18:33] 2025-10-06 14:17:05,769 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 16:18:33] 2025-10-06 14:17:05,771 [wrapper] pilotpid: 1587888
[2025-10-06 16:18:33] 2025-10-06 14:17:05,774 [wrapper] Pilot exit status: 0
[2025-10-06 16:18:33] 2025-10-06 14:17:05,785 [wrapper] pandaids: 6830642022 6830642022
[2025-10-06 16:18:33] 2025-10-06 14:17:05,861 [wrapper] cleanup supervisor_pilot 1843840 1587889
[2025-10-06 16:18:33] 2025-10-06 14:17:05,864 [wrapper] Test setup, not cleaning
[2025-10-06 16:18:33] 2025-10-06 14:17:05,867 [wrapper] apfmon messages muted
[2025-10-06 16:18:33] 2025-10-06 14:17:05,870 [wrapper] ==== wrapper stdout END ====
[2025-10-06 16:18:33] 2025-10-06 14:17:05,872 [wrapper] ==== wrapper stderr END ====
[2025-10-06 16:18:33]  *** Error codes and diagnostics ***
[2025-10-06 16:18:33]     "exeErrorCode": 0,
[2025-10-06 16:18:33]     "exeErrorDiag": "",
[2025-10-06 16:18:33]     "pilotErrorCode": 0,
[2025-10-06 16:18:33]     "pilotErrorDiag": "",
[2025-10-06 16:18:33]  *** Listing of results directory ***
[2025-10-06 16:18:33] total 595120
[2025-10-06 16:18:33] drwx------ 4 boinc boinc      4096 Jul 31 15:00 pilot3
[2025-10-06 16:18:33] -rw-r--r-- 1 boinc boinc    552446 Oct  5 01:31 pilot3.tar.gz
[2025-10-06 16:18:33] -rw-r--r-- 1 boinc boinc      5112 Oct  5 01:41 queuedata.json
[2025-10-06 16:18:33] -rwx------ 1 boinc boinc     36292 Oct  5 01:42 runpilot2-wrapper.sh
[2025-10-06 16:18:33] -rw-r--r-- 1 boinc boinc       100 Oct  6 13:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 16:18:33] -rwxr-xr-x 1 boinc boinc      7986 Oct  6 13:21 run_atlas
[2025-10-06 16:18:33] -rw-r--r-- 1 boinc boinc       105 Oct  6 13:21 job.xml
[2025-10-06 16:18:33] -rw-r--r-- 3 boinc boinc 213562876 Oct  6 13:21 EVNT.46376901._001282.pool.root.1
[2025-10-06 16:18:33] -rw-r--r-- 3 boinc boinc 213562876 Oct  6 13:21 ATLAS.root_0
[2025-10-06 16:18:33] -rw-r--r-- 2 boinc boinc     15120 Oct  6 13:21 start_atlas.sh
[2025-10-06 16:18:33] drwxrwx--x 2 boinc boinc      4096 Oct  6 13:21 shared
[2025-10-06 16:18:33] -rw-r--r-- 2 boinc boinc    565613 Oct  6 13:21 input.tar.gz
[2025-10-06 16:18:33] -rw-r--r-- 1 boinc boinc         0 Oct  6 13:21 boinc_lockfile
[2025-10-06 16:18:33] -rw------- 1 boinc boinc   1560401 Oct  6 13:21 agis_ddmendpoints.agis.ALL.json
[2025-10-06 16:18:33] -rw-r--r-- 1 boinc boinc      2519 Oct  6 14:07 pandaJob.out
[2025-10-06 16:18:33] -rw------- 1 boinc boinc    975011 Oct  6 14:07 agis_schedconf.cvmfs.json
[2025-10-06 16:18:33] -rw-r--r-- 1 boinc boinc      6639 Oct  6 14:22 init_data.xml
[2025-10-06 16:18:33] -rw------- 1 boinc boinc 175519847 Oct  6 16:15 HITS.46376905._070647.pool.root.1
[2025-10-06 16:18:33] -rw-r--r-- 1 boinc boinc       528 Oct  6 16:15 boinc_task_state.xml
[2025-10-06 16:18:33] -rw------- 1 boinc boinc      1030 Oct  6 16:15 memory_monitor_summary.json
[2025-10-06 16:18:33] -rw------- 1 boinc boinc    320552 Oct  6 16:15 log.46376905._070647.job.log.tgz.1
[2025-10-06 16:18:33] -rw------- 1 boinc boinc      7824 Oct  6 16:16 heartbeat.json
[2025-10-06 16:18:33] -rw------- 1 boinc boinc        97 Oct  6 16:16 pilot_heartbeat.json
[2025-10-06 16:18:33] -rw------- 1 boinc boinc      4905 Oct  6 16:17 pilotlog.txt
[2025-10-06 16:18:33] -rw------- 1 boinc boinc   1111236 Oct  6 16:17 log.46376905._070647.job.log.1
[2025-10-06 16:18:33] -rw------- 1 boinc boinc       357 Oct  6 16:17 output.list
[2025-10-06 16:18:33] -rw-r--r-- 1 boinc boinc       620 Oct  6 16:17 runtime_log
[2025-10-06 16:18:33] -rw------- 1 boinc boinc   1454080 Oct  6 16:17 result.tar.gz
[2025-10-06 16:18:33] -rw-r--r-- 1 boinc boinc      9146 Oct  6 16:17 runtime_log.err
[2025-10-06 16:18:33] -rw------- 1 boinc boinc       787 Oct  6 16:17 Aj5NDme4QP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmtmEMDm1M2zkm.diag
[2025-10-06 16:18:33] -rw-r--r-- 1 boinc boinc        26 Oct  6 16:18 wrapper_checkpoint.txt
[2025-10-06 16:18:33] -rw-r--r-- 1 boinc boinc      8192 Oct  6 16:18 boinc_mmap_file
[2025-10-06 16:18:33] -rw-r--r-- 1 boinc boinc     22608 Oct  6 16:18 stderr.txt
[2025-10-06 16:18:33] HITS file was successfully produced:
[2025-10-06 16:18:33] -rw------- 1 boinc boinc 175519847 Oct  6 16:15 shared/HITS.pool.root.1
[2025-10-06 16:18:33]  *** Contents of shared directory: ***
[2025-10-06 16:18:33] total 381964
[2025-10-06 16:18:33] -rw-r--r-- 3 boinc boinc 213562876 Oct  6 13:21 ATLAS.root_0
[2025-10-06 16:18:33] -rw-r--r-- 2 boinc boinc     15120 Oct  6 13:21 start_atlas.sh
[2025-10-06 16:18:33] -rw-r--r-- 2 boinc boinc    565613 Oct  6 13:21 input.tar.gz
[2025-10-06 16:18:33] -rw------- 1 boinc boinc 175519847 Oct  6 16:15 HITS.pool.root.1
[2025-10-06 16:18:33] -rw------- 1 boinc boinc   1454080 Oct  6 16:17 result.tar.gz
16:18:35 (1584076): run_atlas exited; CPU time 29626.416135
16:18:35 (1584076): called boinc_finish(0)

</stderr_txt>
]]>

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