Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:25:02 (708): wrapper (7.7.26015): starting
21:25:02 (708): wrapper: running run_atlas (--nthreads 8)
[2025-10-04 21:25:02] Arguments: --nthreads 8
[2025-10-04 21:25:02] Threads: 8
[2025-10-04 21:25:02] Checking for CVMFS
[2025-10-04 21:25:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-04 21:25:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-04 21:25:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-04 21:25:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-04 21:25:03] 2.11.2.0 27562 258524 270512 151346 0 57 14510177 18432000 2749 130560 7 606018164 99.239 1122861257 26120 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-04 21:25:03] CVMFS is ok
[2025-10-04 21:25:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-04 21:25:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-04 21:25:03] Further information can be found at the LHC@home message board.
[2025-10-04 21:25:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-04 21:25:03] Checking for apptainer binary...
[2025-10-04 21:25:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-04 21:25:03] Running /usr/bin/apptainer --version
[2025-10-04 21:25:03] apptainer version 1.3.2-1.el7
[2025-10-04 21:25:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-04 21:25:04] c-9-30.aglt2.org
[2025-10-04 21:25:04] apptainer works
[2025-10-04 21:25:04] Set ATHENA_PROC_NUMBER=8
[2025-10-04 21:25:04] Set ATHENA_CORE_NUMBER=8
[2025-10-04 21:25:04] Starting ATLAS job with PandaID=6826209339
[2025-10-04 21:25:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-05 00:59:43]  *** The last 200 lines of the pilot log: ***
[2025-10-05 00:59:43] 2025-10-05 04:58:35,156 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-05 00:59:43] 2025-10-05 04:58:35,156 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 00:59:43] 2025-10-05 04:58:35,156 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 00:59:43] 2025-10-05 04:58:35,159 | INFO     | fitting pss+swap vs Time
[2025-10-05 00:59:43] 2025-10-05 04:58:35,159 | INFO     | sum of square deviations: 2871616632.5
[2025-10-05 00:59:43] 2025-10-05 04:58:35,160 | INFO     | sum of deviations: -27052472272.0
[2025-10-05 00:59:43] 2025-10-05 04:58:35,161 | INFO     | mean x: 1759633915.5
[2025-10-05 00:59:43] 2025-10-05 04:58:35,161 | INFO     | mean y: 2501879.8
[2025-10-05 00:59:43] 2025-10-05 04:58:35,161 | INFO     | -- intersect: 16579383058.570837
[2025-10-05 00:59:43] 2025-10-05 04:58:35,161 | INFO     | intersect: 16579383058.570837
[2025-10-05 00:59:43] 2025-10-05 04:58:35,161 | INFO     | chi2: 2.282381335809386
[2025-10-05 00:59:43] 2025-10-05 04:58:35,161 | INFO     | sum of square deviations: 2671343110.0
[2025-10-05 00:59:43] 2025-10-05 04:58:35,162 | INFO     | sum of deviations: -12501082763.000002
[2025-10-05 00:59:43] 2025-10-05 04:58:35,162 | INFO     | mean x: 1759633763.0
[2025-10-05 00:59:43] 2025-10-05 04:58:35,162 | INFO     | mean y: 2512756.580487805
[2025-10-05 00:59:43] 2025-10-05 04:58:35,163 | INFO     | -- intersect: 8237069830.692967
[2025-10-05 00:59:43] 2025-10-05 04:58:35,163 | INFO     | intersect: 8237069830.692967
[2025-10-05 00:59:43] 2025-10-05 04:58:35,163 | INFO     | chi2: 1.510054249983537
[2025-10-05 00:59:43] 2025-10-05 04:58:35,163 | INFO     | current chi2=1.510054249983537 (change=33.83865236314526 %)
[2025-10-05 00:59:43] 2025-10-05 04:58:35,163 | INFO     | sum of square deviations: 2480604650.0
[2025-10-05 00:59:43] 2025-10-05 04:58:35,164 | INFO     | sum of deviations: -12043863850.999996
[2025-10-05 00:59:43] 2025-10-05 04:58:35,164 | INFO     | mean x: 1759633610.5
[2025-10-05 00:59:43] 2025-10-05 04:58:35,164 | INFO     | mean y: 2513122.23
[2025-10-05 00:59:43] 2025-10-05 04:58:35,164 | INFO     | -- intersect: 8545909036.812985
[2025-10-05 00:59:43] 2025-10-05 04:58:35,165 | INFO     | intersect: 8545909036.812985
[2025-10-05 00:59:43] 2025-10-05 04:58:35,165 | INFO     | chi2: 1.5090913334325182
[2025-10-05 00:59:43] 2025-10-05 04:58:35,165 | INFO     | current chi2=1.5090913334325182 (change=0.06376701704784875 %)
[2025-10-05 00:59:43] 2025-10-05 04:58:35,165 | INFO     | right removable region: 199
[2025-10-05 00:59:43] 2025-10-05 04:58:35,165 | INFO     | sum of square deviations: 2671343110.0
[2025-10-05 00:59:43] 2025-10-05 04:58:35,166 | INFO     | sum of deviations: -54857353619.0
[2025-10-05 00:59:43] 2025-10-05 04:58:35,166 | INFO     | mean x: 1759634068.0
[2025-10-05 00:59:43] 2025-10-05 04:58:35,166 | INFO     | mean y: 2522791.4780487805
[2025-10-05 00:59:43] 2025-10-05 04:58:35,166 | INFO     | -- intersect: 36137479752.62839
[2025-10-05 00:59:43] 2025-10-05 04:58:35,167 | INFO     | intersect: 36137479752.62839
[2025-10-05 00:59:43] 2025-10-05 04:58:35,167 | INFO     | chi2: 0.9926309256800925
[2025-10-05 00:59:43] 2025-10-05 04:58:35,167 | INFO     | current chi2=0.9926309256800925 (change=56.508979892788936 %)
[2025-10-05 00:59:43] 2025-10-05 04:58:35,167 | INFO     | sum of square deviations: 2480604650.0
[2025-10-05 00:59:43] 2025-10-05 04:58:35,168 | INFO     | sum of deviations: -51187558727.000015
[2025-10-05 00:59:43] 2025-10-05 04:58:35,168 | INFO     | mean x: 1759634220.5
[2025-10-05 00:59:43] 2025-10-05 04:58:35,168 | INFO     | mean y: 2519824.79
[2025-10-05 00:59:43] 2025-10-05 04:58:35,168 | INFO     | -- intersect: 36312771843.33824
[2025-10-05 00:59:43] 2025-10-05 04:58:35,168 | INFO     | intersect: 36312771843.33824
[2025-10-05 00:59:43] 2025-10-05 04:58:35,169 | INFO     | chi2: 0.9825606686142051
[2025-10-05 00:59:43] 2025-10-05 04:58:35,169 | INFO     | current chi2=0.9825606686142051 (change=1.0145016446055042 %)
[2025-10-05 00:59:43] 2025-10-05 04:58:35,169 | INFO     | left removable region: 20
[2025-10-05 00:59:43] 2025-10-05 04:58:35,169 | INFO     | sum of square deviations: 1778377530.0
[2025-10-05 00:59:43] 2025-10-05 04:58:35,170 | INFO     | sum of deviations: -23369151423.0
[2025-10-05 00:59:43] 2025-10-05 04:58:35,170 | INFO     | mean x: 1759634190.0
[2025-10-05 00:59:43] 2025-10-05 04:58:35,170 | INFO     | mean y: 2520941.8547486034
[2025-10-05 00:59:43] 2025-10-05 04:58:35,170 | INFO     | -- intersect: 23125371484.842632
[2025-10-05 00:59:43] 2025-10-05 04:58:35,170 | INFO     | intersect: 23125371484.842632
[2025-10-05 00:59:43] 2025-10-05 04:58:35,170 | INFO     | chi2: 0.15917854424502556
[2025-10-05 00:59:43] 2025-10-05 04:58:35,171 | INFO     | -- intersect: 23125371484.842632
[2025-10-05 00:59:43] 2025-10-05 04:58:35,171 | INFO     | current memory leak: -13.14 B/s (using 179 data points, chi2=0.16)
[2025-10-05 00:59:43] 2025-10-05 04:58:35,171 | INFO     | could have reported an average CPU frequency of 2999 MHz (10 samples)
[2025-10-05 00:59:43] 2025-10-05 04:58:35,171 | INFO     | ..............................
[2025-10-05 00:59:43] 2025-10-05 04:58:35,171 | INFO     | . Timing measurements:
[2025-10-05 00:59:43] 2025-10-05 04:58:35,171 | INFO     | . get job = 0 s
[2025-10-05 00:59:43] 2025-10-05 04:58:35,171 | INFO     | . initial setup = 2 s
[2025-10-05 00:59:43] 2025-10-05 04:58:35,171 | INFO     | . payload setup = 4 s
[2025-10-05 00:59:43] 2025-10-05 04:58:35,172 | INFO     | . stage-in = 0 s
[2025-10-05 00:59:43] 2025-10-05 04:58:35,172 | INFO     | . payload execution = 12765 s
[2025-10-05 00:59:43] 2025-10-05 04:58:35,172 | INFO     | . stage-out = 2 s
[2025-10-05 00:59:43] 2025-10-05 04:58:35,172 | INFO     | . log creation = 0 s
[2025-10-05 00:59:43] 2025-10-05 04:58:35,172 | INFO     | ..............................
[2025-10-05 00:59:43] 2025-10-05 04:58:35,291 | INFO     | 
[2025-10-05 00:59:43] 2025-10-05 04:58:35,291 | INFO     | job summary report
[2025-10-05 00:59:43] 2025-10-05 04:58:35,292 | INFO     | --------------------------------------------------
[2025-10-05 00:59:43] 2025-10-05 04:58:35,292 | INFO     | PanDA job id: 6826209339
[2025-10-05 00:59:43] 2025-10-05 04:58:35,292 | INFO     | task id: 46373048
[2025-10-05 00:59:43] 2025-10-05 04:58:35,292 | INFO     | errors: (none)
[2025-10-05 00:59:43] 2025-10-05 04:58:35,292 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-05 00:59:43] 2025-10-05 04:58:35,292 | INFO     | pilot state: finished 
[2025-10-05 00:59:43] 2025-10-05 04:58:35,293 | INFO     | transexitcode: 0
[2025-10-05 00:59:43] 2025-10-05 04:58:35,293 | INFO     | exeerrorcode: 0
[2025-10-05 00:59:43] 2025-10-05 04:58:35,293 | INFO     | exeerrordiag: 
[2025-10-05 00:59:43] 2025-10-05 04:58:35,293 | INFO     | exitcode: 0
[2025-10-05 00:59:43] 2025-10-05 04:58:35,293 | INFO     | exitmsg: OK
[2025-10-05 00:59:43] 2025-10-05 04:58:35,293 | INFO     | cpuconsumptiontime: 96741 s
[2025-10-05 00:59:43] 2025-10-05 04:58:35,293 | INFO     | nevents: 400
[2025-10-05 00:59:43] 2025-10-05 04:58:35,294 | INFO     | neventsw: 0
[2025-10-05 00:59:43] 2025-10-05 04:58:35,294 | INFO     | pid: 11443
[2025-10-05 00:59:43] 2025-10-05 04:58:35,294 | INFO     | pgrp: 11443
[2025-10-05 00:59:43] 2025-10-05 04:58:35,294 | INFO     | corecount: 8
[2025-10-05 00:59:43] 2025-10-05 04:58:35,294 | INFO     | event service: False
[2025-10-05 00:59:43] 2025-10-05 04:58:35,294 | INFO     | sizes: {0: 2348670, 1: 2348869, 5: 2349131, 12: 2349187, 12774: 2379364, 12777: 2388362, 12779: 2388546, 12785: 2388740}
[2025-10-05 00:59:43] 2025-10-05 04:58:35,295 | INFO     | --------------------------------------------------
[2025-10-05 00:59:43] 2025-10-05 04:58:35,295 | INFO     | 
[2025-10-05 00:59:43] 2025-10-05 04:58:35,295 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-05 00:59:43] 2025-10-05 04:58:35,313 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-05 00:59:43] 2025-10-05 04:58:35,313 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-05 00:59:43] 2025-10-05 04:58:35,314 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-05 00:59:43] 2025-10-05 04:58:35,314 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-05 00:59:43] 2025-10-05 04:58:35,314 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-05 00:59:43] 2025-10-05 04:58:35,314 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-05 00:59:43] 2025-10-05 04:58:35,314 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-05 00:59:43] 2025-10-05 04:58:35,314 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-05 00:59:43] 2025-10-05 04:58:35,314 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-05 00:59:43] 2025-10-05 04:58:35,314 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-05 00:59:43] 2025-10-05 04:58:35,314 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-05 00:59:43] 2025-10-05 04:58:35,314 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-05 00:59:43] 2025-10-05 04:58:35,315 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-05 00:59:43] 2025-10-05 04:58:35,315 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-05 00:59:43] 2025-10-05 04:58:35,315 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-05 00:59:43] 2025-10-05 04:58:35,315 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-05 00:59:43] 2025-10-05 04:58:35,315 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-05 00:59:43] 2025-10-05 04:58:35,315 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-05 00:59:43] 2025-10-05 04:58:35,315 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-05 00:59:43] 2025-10-05 04:58:35,315 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-05 00:59:43] 2025-10-05 04:58:35,315 | INFO     | job 6826209339 has completed (purged errors)
[2025-10-05 00:59:43] 2025-10-05 04:58:35,315 | INFO     | overall cleanup function is called
[2025-10-05 00:59:43] 2025-10-05 04:58:36,323 | INFO     | --- collectZombieJob: --- 10, [11443]
[2025-10-05 00:59:43] 2025-10-05 04:58:36,324 | INFO     | zombie collector waiting for pid 11443
[2025-10-05 00:59:43] 2025-10-05 04:58:36,324 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-05 00:59:43] 2025-10-05 04:58:36,324 | INFO     | collected zombie processes
[2025-10-05 00:59:43] 2025-10-05 04:58:36,324 | INFO     | will attempt to kill all subprocesses of pid=11443
[2025-10-05 00:59:43] 2025-10-05 04:58:36,635 | INFO     | process IDs to be killed: [11443] (in reverse order)
[2025-10-05 00:59:43] 2025-10-05 04:58:36,724 | WARNING  | found no corresponding commands to process id(s)
[2025-10-05 00:59:43] 2025-10-05 04:58:36,724 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-05 00:59:43] 2025-10-05 04:58:36,735 | INFO     | did not find any defunct processes belonging to 11443
[2025-10-05 00:59:43] 2025-10-05 04:58:36,745 | INFO     | did not find any defunct processes belonging to 11443
[2025-10-05 00:59:43] 2025-10-05 04:58:36,745 | INFO     | ready for new job
[2025-10-05 00:59:43] 2025-10-05 04:58:36,745 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-05 00:59:43] 2025-10-05 04:58:36,747 | INFO     | ***************************************
[2025-10-05 00:59:43] 2025-10-05 04:58:36,748 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-05 00:59:43] 2025-10-05 04:58:36,748 | INFO     | ***************************************
[2025-10-05 00:59:43] 2025-10-05 04:58:36,748 | INFO     | 
[2025-10-05 00:59:43] 2025-10-05 04:58:36,750 | INFO     | architecture information:
[2025-10-05 00:59:43] 2025-10-05 04:58:36,750 | INFO     | executing command: cat /etc/os-release
[2025-10-05 00:59:43] 2025-10-05 04:58:36,762 | INFO     | cat /etc/os-release:
[2025-10-05 00:59:43] NAME="CentOS Linux"
[2025-10-05 00:59:43] VERSION="7 (Core)"
[2025-10-05 00:59:43] ID="centos"
[2025-10-05 00:59:43] ID_LIKE="rhel fedora"
[2025-10-05 00:59:43] VERSION_ID="7"
[2025-10-05 00:59:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-05 00:59:43] ANSI_COLOR="0;31"
[2025-10-05 00:59:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-05 00:59:43] HOME_URL="https://www.centos.org/"
[2025-10-05 00:59:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-05 00:59:43] 
[2025-10-05 00:59:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-05 00:59:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-05 00:59:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-05 00:59:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-05 00:59:43] 
[2025-10-05 00:59:43] 2025-10-05 04:58:36,762 | INFO     | ***************************************
[2025-10-05 00:59:43] 2025-10-05 04:58:37,265 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-05 00:59:43] 2025-10-05 04:58:37,292 | INFO     | sufficient remaining disk space (104917368832 B)
[2025-10-05 00:59:43] 2025-10-05 04:58:37,292 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-05 00:59:43] 2025-10-05 04:58:37,292 | INFO     | current server update state: UPDATING_FINAL
[2025-10-05 00:59:43] 2025-10-05 04:58:37,293 | INFO     | update_server=False
[2025-10-05 00:59:43] 2025-10-05 04:58:37,293 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-05 00:59:43] 2025-10-05 04:58:37,293 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-05 00:59:43] 2025-10-05 04:58:37,293 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-05 00:59:43] 2025-10-05 04:58:37,294 | INFO     | aborting loop
[2025-10-05 00:59:43] 2025-10-05 04:58:37,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-05 00:59:43] 2025-10-05 04:58:37,905 | INFO     | all data control threads have been joined
[2025-10-05 00:59:43] 2025-10-05 04:58:38,299 | INFO     | [job] retrieve thread has finished
[2025-10-05 00:59:43] 2025-10-05 04:58:38,300 | INFO     | [job] queue monitor thread has finished
[2025-10-05 00:59:43] 2025-10-05 04:58:38,300 | INFO     | [job] job monitor thread has finished
[2025-10-05 00:59:43] 2025-10-05 04:58:38,356 | INFO     | [data] copytool_in thread has finished
[2025-10-05 00:59:43] 2025-10-05 04:58:38,405 | INFO     | all job control threads have been joined
[2025-10-05 00:59:43] 2025-10-05 04:58:38,433 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-05 00:59:43] 2025-10-05 04:58:38,585 | INFO     | [payload] validate_post thread has finished
[2025-10-05 00:59:43] 2025-10-05 04:58:38,692 | INFO     | all payload control threads have been joined
[2025-10-05 00:59:43] 2025-10-05 04:58:38,706 | INFO     | [job] validate thread has finished
[2025-10-05 00:59:43] 2025-10-05 04:58:38,910 | INFO     | [data] control thread has finished
[2025-10-05 00:59:43] 2025-10-05 04:58:39,211 | INFO     | [payload] execute_payloads thread has finished
[2025-10-05 00:59:43] 2025-10-05 04:58:39,268 | INFO     | [payload] failed_post thread has finished
[2025-10-05 00:59:43] 2025-10-05 04:58:39,411 | INFO     | [job] control thread has finished
[2025-10-05 00:59:43] 2025-10-05 04:58:39,561 | INFO     | [job] create_data_payload thread has finished
[2025-10-05 00:59:43] 2025-10-05 04:58:39,697 | INFO     | [payload] control thread has finished
[2025-10-05 00:59:43] 2025-10-05 04:58:39,718 | INFO     | [payload] validate_pre thread has finished
[2025-10-05 00:59:43] 2025-10-05 04:58:39,809 | INFO     | [data] copytool_out thread has finished
[2025-10-05 00:59:43] 2025-10-05 04:58:40,331 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-05 00:59:43] 2025-10-05 04:58:44,337 | INFO     | [data] queue_monitor thread has finished
[2025-10-05 00:59:43] 2025-10-05 04:59:08,465 | INFO     | PID=4938 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-05 00:59:43] 2025-10-05 04:59:08,465 | INFO     | .. there are 4 such processes running
[2025-10-05 00:59:43] 2025-10-05 04:59:08,466 | INFO     | found 0 job(s) in 20 queues
[2025-10-05 00:59:43] 2025-10-05 04:59:08,466 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-05 00:59:43] 2025-10-05 04:59:08,467 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-05 00:59:43] 2025-10-05 04:59:36,386 | INFO     | [monitor] cgroup control has ended
[2025-10-05 00:59:43] 2025-10-05 04:59:37,901 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139960842274624)>', '<ExcThread(monitor, started 139960392853248)>']
[2025-10-05 00:59:43] 2025-10-05 04:59:38,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-05 00:59:43] 2025-10-05 04:59:38,630 | INFO     | [monitor] control thread has ended
[2025-10-05 00:59:43] 2025-10-05 04:59:42,927 | INFO     | all workflow threads have been joined
[2025-10-05 00:59:43] 2025-10-05 04:59:42,928 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-05 00:59:43] 2025-10-05 04:59:42,928 | INFO     | traces error code: 0
[2025-10-05 00:59:43] 2025-10-05 04:59:42,928 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-05 00:59:43] 2025-10-05 04:59:43,045 [wrapper] ==== pilot stdout END ====
[2025-10-05 00:59:43] 2025-10-05 04:59:43,047 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-05 00:59:43] 2025-10-05 04:59:43,049 [wrapper] pilotpid: 4938
[2025-10-05 00:59:43] 2025-10-05 04:59:43,051 [wrapper] Pilot exit status: 0
[2025-10-05 00:59:43] 2025-10-05 04:59:43,060 [wrapper] pandaids: 6826209339
[2025-10-05 00:59:43] 2025-10-05 04:59:43,125 [wrapper] cleanup supervisor_pilot 37193 4939
[2025-10-05 00:59:43] 2025-10-05 04:59:43,127 [wrapper] Test setup, not cleaning
[2025-10-05 00:59:43] 2025-10-05 04:59:43,129 [wrapper] apfmon messages muted
[2025-10-05 00:59:43] 2025-10-05 04:59:43,132 [wrapper] ==== wrapper stdout END ====
[2025-10-05 00:59:43] 2025-10-05 04:59:43,134 [wrapper] ==== wrapper stderr END ====
[2025-10-05 00:59:43]  *** Error codes and diagnostics ***
[2025-10-05 00:59:43]     "exeErrorCode": 0,
[2025-10-05 00:59:43]     "exeErrorDiag": "",
[2025-10-05 00:59:43]     "pilotErrorCode": 0,
[2025-10-05 00:59:43]     "pilotErrorDiag": "",
[2025-10-05 00:59:43]  *** Listing of results directory ***
[2025-10-05 00:59:43] total 420520
[2025-10-05 00:59:43] -rw-r--r-- 1 boincer umatlas    552446 Sep 30 18:54 pilot3.tar.gz
[2025-10-05 00:59:43] -rwx------ 1 boincer umatlas     36292 Sep 30 18:56 runpilot2-wrapper.sh
[2025-10-05 00:59:43] -rw-r--r-- 1 boincer umatlas      5112 Sep 30 18:56 queuedata.json
[2025-10-05 00:59:43] -rw-r--r-- 1 boincer umatlas       100 Oct  4 21:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-05 00:59:43] -rwxr-xr-x 1 boincer umatlas      7986 Oct  4 21:25 run_atlas
[2025-10-05 00:59:43] -rw-r--r-- 1 boincer umatlas       105 Oct  4 21:25 job.xml
[2025-10-05 00:59:43] -rw-r--r-- 2 boincer umatlas 221044551 Oct  4 21:25 EVNT.46373045._002393.pool.root.1
[2025-10-05 00:59:43] -rw-r--r-- 2 boincer umatlas     15120 Oct  4 21:25 start_atlas.sh
[2025-10-05 00:59:43] drwxrwx--x 2 boincer umatlas      4096 Oct  4 21:25 shared
[2025-10-05 00:59:43] -rw-r--r-- 2 boincer umatlas    565602 Oct  4 21:25 input.tar.gz
[2025-10-05 00:59:43] -rw-r--r-- 1 boincer umatlas         0 Oct  4 21:25 boinc_lockfile
[2025-10-05 00:59:43] -rw-r--r-- 1 boincer umatlas      2538 Oct  4 21:25 pandaJob.out
[2025-10-05 00:59:43] -rw------- 1 boincer umatlas    973982 Oct  4 21:25 agis_schedconf.cvmfs.json
[2025-10-05 00:59:43] drwx------ 4 boincer umatlas      4096 Oct  4 21:25 pilot3
[2025-10-05 00:59:43] -rw-r--r-- 1 boincer umatlas      6035 Oct  5 00:55 init_data.xml
[2025-10-05 00:59:43] -rw------- 1 boincer umatlas 201276083 Oct  5 00:57 HITS.46373048._072564.pool.root.1
[2025-10-05 00:59:43] -rw-r--r-- 1 boincer umatlas       530 Oct  5 00:57 boinc_task_state.xml
[2025-10-05 00:59:43] -rw------- 1 boincer umatlas      1048 Oct  5 00:58 memory_monitor_summary.json
[2025-10-05 00:59:43] -rw------- 1 boincer umatlas   1560401 Oct  5 00:58 agis_ddmendpoints.agis.ALL.json
[2025-10-05 00:59:43] -rw------- 1 boincer umatlas    451108 Oct  5 00:58 log.46373048._072564.job.log.tgz.1
[2025-10-05 00:59:43] -rw------- 1 boincer umatlas      7838 Oct  5 00:58 heartbeat.json
[2025-10-05 00:59:43] -rw------- 1 boincer umatlas        95 Oct  5 00:59 pilot_heartbeat.json
[2025-10-05 00:59:43] -rw-r--r-- 1 boincer umatlas      8192 Oct  5 00:59 boinc_mmap_file
[2025-10-05 00:59:43] -rw-r--r-- 1 boincer umatlas        28 Oct  5 00:59 wrapper_checkpoint.txt
[2025-10-05 00:59:43] -rw------- 1 boincer umatlas      4821 Oct  5 00:59 pilotlog.txt
[2025-10-05 00:59:43] -rw------- 1 boincer umatlas   1755096 Oct  5 00:59 log.46373048._072564.job.log.1
[2025-10-05 00:59:43] -rw------- 1 boincer umatlas       357 Oct  5 00:59 output.list
[2025-10-05 00:59:43] -rw-r--r-- 1 boincer umatlas       620 Oct  5 00:59 runtime_log
[2025-10-05 00:59:43] -rw------- 1 boincer umatlas   2222080 Oct  5 00:59 result.tar.gz
[2025-10-05 00:59:43] -rw-r--r-- 1 boincer umatlas      8694 Oct  5 00:59 runtime_log.err
[2025-10-05 00:59:43] -rw------- 1 boincer umatlas       659 Oct  5 00:59 8LbMDmwRyN8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMGANDm6LE0Dm.diag
[2025-10-05 00:59:43] -rw-r--r-- 1 boincer umatlas     20847 Oct  5 00:59 stderr.txt
[2025-10-05 00:59:43] HITS file was successfully produced:
[2025-10-05 00:59:43] -rw------- 1 boincer umatlas 201276083 Oct  5 00:57 shared/HITS.pool.root.1
[2025-10-05 00:59:43]  *** Contents of shared directory: ***
[2025-10-05 00:59:43] total 415172
[2025-10-05 00:59:43] -rw-r--r-- 2 boincer umatlas 221044551 Oct  4 21:25 ATLAS.root_0
[2025-10-05 00:59:43] -rw-r--r-- 2 boincer umatlas     15120 Oct  4 21:25 start_atlas.sh
[2025-10-05 00:59:43] -rw-r--r-- 2 boincer umatlas    565602 Oct  4 21:25 input.tar.gz
[2025-10-05 00:59:43] -rw------- 1 boincer umatlas 201276083 Oct  5 00:57 HITS.pool.root.1
[2025-10-05 00:59:43] -rw------- 1 boincer umatlas   2222080 Oct  5 00:59 result.tar.gz
00:59:44 (708): run_atlas exited; CPU time 97139.958805
00:59:44 (708): called boinc_finish(0)

</stderr_txt>
]]>

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