Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-05 21:09:13 (641441): vboxwrapper version 26210
2025-10-05 21:09:13 (641441): BOINC client version: 8.0.4
2025-10-05 21:09:13 (641441): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-10-05 21:09:13 (641441): Successfully copied 'init_data.xml' to the shared directory.
2025-10-05 21:09:13 (641441): Create VM. (boinc_e4aac1cb65feb214, slot#1)
2025-10-05 21:09:14 (641441): Setting Memory Size for VM. (4200MB)
2025-10-05 21:09:14 (641441): Setting CPU Count for VM. (2)
2025-10-05 21:09:14 (641441): Setting Chipset Options for VM.
2025-10-05 21:09:14 (641441): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-05 21:09:14 (641441): Setting Boot Options for VM.
2025-10-05 21:09:14 (641441): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-05 21:09:14 (641441): Enabling VM Network Access.
2025-10-05 21:09:14 (641441): Disabling USB Support for VM.
2025-10-05 21:09:14 (641441): Disabling COM Port Support for VM.
2025-10-05 21:09:14 (641441): Disabling LPT Port Support for VM.
2025-10-05 21:09:15 (641441): Disabling Audio Support for VM.
2025-10-05 21:09:15 (641441): Disabling Clipboard Support for VM.
2025-10-05 21:09:15 (641441): Disabling Drag and Drop Support for VM.
2025-10-05 21:09:15 (641441): Adding storage controller(s) to VM.
2025-10-05 21:09:15 (641441): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-05 21:09:16 (641441): Adding VirtualBox Guest Additions to VM.
2025-10-05 21:09:16 (641441): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-05 21:09:16 (641441): forwarding host port 36317 to guest port 80
2025-10-05 21:09:16 (641441): Enabling remote desktop for VM.
2025-10-05 21:09:16 (641441): Required extension pack not installed, remote desktop not enabled.
2025-10-05 21:09:16 (641441): Enabling shared directory for VM.
2025-10-05 21:09:16 (641441): Starting VM using VBoxManage interface. (boinc_e4aac1cb65feb214, slot#1)
2025-10-05 21:09:17 (641441): Successfully started VM. (PID = '642097')
2025-10-05 21:09:17 (641441): Reporting VM Process ID to BOINC.
2025-10-05 21:09:17 (641441): Guest Log: BIOS: VirtualBox 7.2.2
2025-10-05 21:09:17 (641441): Guest Log: CPUID EDX: 0x178bfbff
2025-10-05 21:09:17 (641441): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-05 21:09:17 (641441): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-05 21:09:17 (641441): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-05 21:09:17 (641441): Detected: Web Application Enabled (http://localhost:36317)
2025-10-05 21:09:17 (641441): Preference change detected
2025-10-05 21:09:17 (641441): Setting CPU throttle for VM. (50%)
2025-10-05 21:09:18 (641441): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-05 21:09:19 (641441): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-05 21:09:19 (641441): Guest Log: BIOS: Booting from Hard Disk...
2025-10-05 21:09:25 (641441): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-05 21:09:25 (641441): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-05 21:09:25 (641441): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-05 21:09:37 (641441): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-05 21:09:37 (641441): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-05 21:09:58 (641441): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-05 21:09:58 (641441): Guest Log: 00:00:00.000418 main     Log opened 2025-10-05T19:09:56.088933000Z
2025-10-05 21:09:58 (641441): Guest Log: 00:00:00.000656 main     OS Product: Linux
2025-10-05 21:09:58 (641441): Guest Log: 00:00:00.000737 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-05 21:09:58 (641441): Guest Log: 00:00:00.000806 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-05 21:09:58 (641441): Guest Log: 00:00:00.000874 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-05 21:09:58 (641441): Guest Log: 00:00:00.000876 main     Process ID: 1267
2025-10-05 21:09:58 (641441): Guest Log: 00:00:00.000877 main     Package type: LINUX_64BITS_GENERIC
2025-10-05 21:09:58 (641441): Guest Log: 00:00:00.003432 main     5.2.32 r132073 started. Verbose level = 0
2025-10-05 21:09:59 (641441): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-05 21:09:59 (641441): Guest Log: [INFO] Mounting shared directory
2025-10-05 21:09:59 (641441): Guest Log: [INFO] Checking for init_data.xml
2025-10-05 21:12:28 (641441): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-05 21:12:28 (641441): Guest Log: [INFO] Detected branch: prod
2025-10-05 21:12:28 (641441): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-05 21:12:28 (641441): Guest Log: Copying input files
2025-10-05 21:12:31 (641441): Guest Log: Copied input files into RunAtlas.
2025-10-05 21:12:31 (641441): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-05 21:12:31 (641441): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-05 21:12:31 (641441): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-05 21:12:31 (641441): Guest Log: Further information can be found at the LHC@home message board.
2025-10-05 21:17:39 (641441): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-05 21:17:47 (641441): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-05 21:17:47 (641441): Guest Log: 2.6.3.0 1594 5 30304 151373 4 1 3120538 4096000 0 65024 0 0 n/a 1291 15 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-05 21:17:49 (641441): Guest Log: copied the webapp to /var/www
2025-10-05 21:17:49 (641441): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-05 21:17:49 (641441): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-05 21:17:49 (641441): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-05 21:17:49 (641441): Guest Log:  *** Starting ATLAS job. (PandaID=6830320406 taskID=46373048) ***
2025-10-05 22:48:18 (641441): Status Report: Elapsed Time: '6000.000000'
2025-10-05 22:48:18 (641441): Status Report: CPU Time: '3449.870000'
2025-10-06 00:27:19 (641441): Status Report: Elapsed Time: '12000.000000'
2025-10-06 00:27:19 (641441): Status Report: CPU Time: '9674.510000'
2025-10-06 02:06:20 (641441): Status Report: Elapsed Time: '18000.000000'
2025-10-06 02:06:20 (641441): Status Report: CPU Time: '15898.500000'
2025-10-06 02:27:12 (641441): VM state change detected. (old = 'running', new = 'paused')
2025-10-06 02:27:32 (641441): VM state change detected. (old = 'paused', new = 'running')
2025-10-06 03:45:41 (641441): Status Report: Elapsed Time: '24000.000000'
2025-10-06 03:45:41 (641441): Status Report: CPU Time: '22138.340000'
2025-10-06 05:24:42 (641441): Status Report: Elapsed Time: '30000.000000'
2025-10-06 05:24:42 (641441): Status Report: CPU Time: '28384.170000'
2025-10-06 07:03:43 (641441): Status Report: Elapsed Time: '36000.000000'
2025-10-06 07:03:43 (641441): Status Report: CPU Time: '34624.710000'
2025-10-06 08:42:43 (641441): Status Report: Elapsed Time: '42000.000000'
2025-10-06 08:42:43 (641441): Status Report: CPU Time: '40857.150000'
2025-10-06 10:21:44 (641441): Status Report: Elapsed Time: '48000.000000'
2025-10-06 10:21:44 (641441): Status Report: CPU Time: '47074.540000'
2025-10-06 12:00:45 (641441): Status Report: Elapsed Time: '54000.000000'
2025-10-06 12:00:45 (641441): Status Report: CPU Time: '53293.470000'
2025-10-06 13:39:46 (641441): Status Report: Elapsed Time: '60000.000000'
2025-10-06 13:39:46 (641441): Status Report: CPU Time: '59508.690000'
2025-10-06 15:18:47 (641441): Status Report: Elapsed Time: '66000.000000'
2025-10-06 15:18:47 (641441): Status Report: CPU Time: '65618.230000'
2025-10-06 15:29:01 (641441): VM state change detected. (old = 'running', new = 'paused')
2025-10-06 15:29:22 (641441): VM state change detected. (old = 'paused', new = 'running')
2025-10-06 15:31:02 (641441): VM state change detected. (old = 'running', new = 'paused')
2025-10-06 15:31:42 (641441): VM state change detected. (old = 'paused', new = 'running')
2025-10-06 15:39:47 (641441): Guest Log:  *** Job finished ***
2025-10-06 15:39:47 (641441): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:16,591 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:16,591 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:38,636 | INFO     | [monitor] cgroup control has ended
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:39,946 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139918962980672)>', '<ExcThread(monitor, started 139918642747136)>']
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:40,639 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:40,640 | INFO     | [monitor] control thread has ended
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:44,952 | INFO     | all workflow threads have been joined
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:44,952 | INFO     | end of generic workflow (traces error code: 0)
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:44,953 | INFO     | traces error code: 0
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:44,953 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:45,198 [wrapper] ==== pilot stdout END ====
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:45,206 [wrapper] ==== wrapper stdout RESUME ====
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:45,214 [wrapper] pilotpid: 6891
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:45,222 [wrapper] Pilot exit status: 0
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:45,295 [wrapper] pandaids: 6830320406
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:45,371 [wrapper] cleanup supervisor_pilot 12347 6892
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:45,384 [wrapper] Test setup, not cleaning
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:45,394 [wrapper] apfmon messages muted
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:45,403 [wrapper] ==== wrapper stdout END ====
2025-10-06 15:39:47 (641441): Guest Log: 2025-10-06 13:38:45,411 [wrapper] ==== wrapper stderr END ====
2025-10-06 15:39:47 (641441): Guest Log:  *** Error codes and diagnostics ***
2025-10-06 15:39:47 (641441): Guest Log:     "exeErrorCode": 0,
2025-10-06 15:39:47 (641441): Guest Log:     "exeErrorDiag": "",
2025-10-06 15:39:47 (641441): Guest Log:     "pilotErrorCode": 0,
2025-10-06 15:39:47 (641441): Guest Log:     "pilotErrorDiag": "",
2025-10-06 15:39:47 (641441): Guest Log:  *** Listing of results directory ***
2025-10-06 15:39:47 (641441): Guest Log: total 206172
2025-10-06 15:39:47 (641441): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  4 20:32 pilot3.tar.gz
2025-10-06 15:39:47 (641441): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  4 20:41 queuedata.json
2025-10-06 15:39:47 (641441): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  4 20:41 runpilot2-wrapper.sh
2025-10-06 15:39:47 (641441): Guest Log: -rw-r--r--. 1 atlas atlas    565607 Oct  5 19:12 input.tar.gz
2025-10-06 15:39:47 (641441): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct  5 19:12 start_atlas.sh
2025-10-06 15:39:47 (641441): Guest Log: -rw-r--r--. 1 atlas atlas      6860 Oct  5 19:12 init_data.xml
2025-10-06 15:39:47 (641441): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  5 19:12 EVNT.46373045._002120.pool.root.1 -> /data/./ATLAS.root_0
2025-10-06 15:39:47 (641441): Guest Log: -rw-r--r--. 1 atlas atlas      2537 Oct  5 19:17 pandaJob.out
2025-10-06 15:39:47 (641441): Guest Log: -rw-------. 1 atlas atlas   1299052 Oct  5 19:49 cric_ddmendpoints.json
2025-10-06 15:39:47 (641441): Guest Log: -rw-------. 1 atlas atlas    974136 Oct  5 19:49 agis_schedconf.cvmfs.json
2025-10-06 15:39:47 (641441): Guest Log: drwx------. 4 atlas atlas      4096 Oct  5 19:49 pilot3
2025-10-06 15:39:47 (641441): Guest Log: -rw-------. 1 atlas atlas 189868280 Oct  6 13:36 HITS.46373048._096924.pool.root.1
2025-10-06 15:39:47 (641441): Guest Log: -rw-------. 1 atlas atlas      1002 Oct  6 13:37 memory_monitor_summary.json
2025-10-06 15:39:47 (641441): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  6 13:37 agis_ddmendpoints.agis.ALL.json
2025-10-06 15:39:47 (641441): Guest Log: -rw-------. 1 atlas atlas    936390 Oct  6 13:37 log.46373048._096924.job.log.tgz.1
2025-10-06 15:39:47 (641441): Guest Log: -rw-------. 1 atlas atlas      7749 Oct  6 13:37 heartbeat.json
2025-10-06 15:39:47 (641441): Guest Log: -rw-------. 1 atlas atlas        95 Oct  6 13:38 pilot_heartbeat.json
2025-10-06 15:39:47 (641441): Guest Log: -rw-------. 1 atlas atlas      4805 Oct  6 13:38 pilotlog.txt
2025-10-06 15:39:47 (641441): Guest Log: -rw-------. 1 atlas atlas   7133322 Oct  6 13:38 log.46373048._096924.job.log.1
2025-10-06 15:39:47 (641441): Guest Log: -rw-------. 1 atlas atlas       357 Oct  6 13:38 output.list
2025-10-06 15:39:47 (641441): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  6 13:38 runtime_log
2025-10-06 15:39:47 (641441): Guest Log: -rw-------. 1 atlas atlas   8089600 Oct  6 13:38 result.tar.gz
2025-10-06 15:39:47 (641441): Guest Log: -rw-------. 1 atlas atlas       652 Oct  6 13:38 WxlMDmcFOP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3cMNDmb8bfrm.diag
2025-10-06 15:39:47 (641441): Guest Log: -rw-r--r--. 1 atlas atlas      8613 Oct  6 13:38 runtime_log.err
2025-10-06 15:39:47 (641441): Guest Log: Looking for outputfile HITS.46373048._096924.pool.root.1
2025-10-06 15:39:47 (641441): Guest Log: HITS file was successfully produced
2025-10-06 15:39:47 (641441): Guest Log: -rw-------. 1 atlas atlas 189868280 Oct  6 13:36 /home/atlas/RunAtlas/HITS.46373048._096924.pool.root.1
2025-10-06 15:39:47 (641441): Guest Log: Successfully finished the ATLAS job!
2025-10-06 15:39:47 (641441): Guest Log: Copying the results back to the shared directory!
2025-10-06 15:39:47 (641441): Guest Log:  *** Contents of shared directory: ***
2025-10-06 15:39:48 (641441): Guest Log: total 224964
2025-10-06 15:39:48 (641441): Guest Log: -rw-r--r--. 1 root root 221676290 Oct  5 19:09 ATLAS.root_0
2025-10-06 15:39:48 (641441): Guest Log: -rw-r--r--. 1 root root      6860 Oct  5 19:09 init_data.xml
2025-10-06 15:39:48 (641441): Guest Log: -rw-r--r--. 1 root root    565607 Oct  5 19:09 input.tar.gz
2025-10-06 15:39:48 (641441): Guest Log: -rw-r--r--. 1 root root   8089600 Oct  6  2025 result.tar.gz
2025-10-06 15:39:48 (641441): Guest Log: -rw-r--r--. 1 root root     15120 Oct  5 19:09 start_atlas.sh
2025-10-06 15:39:48 (641441): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-06 15:39:48 (641441): VM Completion File Detected.
2025-10-06 15:39:48 (641441): Powering off VM.
2025-10-06 15:39:49 (641441): Successfully stopped VM.
2025-10-06 15:39:49 (641441): Deregistering VM. (boinc_e4aac1cb65feb214, slot#1)
2025-10-06 15:39:49 (641441): Removing network bandwidth throttle group from VM.
2025-10-06 15:39:49 (641441): Removing VM from VirtualBox.
2025-10-06 15:39:55 (641441): called boinc_finish(0)

</stderr_txt>
]]>

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