Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:39:25 (1538): wrapper (7.7.26015): starting
10:39:25 (1538): wrapper: running run_atlas (--nthreads 8)
[2025-10-06 10:39:25] Arguments: --nthreads 8
[2025-10-06 10:39:25] Threads: 8
[2025-10-06 10:39:25] Checking for CVMFS
[2025-10-06 10:39:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 10:39:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 10:39:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 10:39:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 10:39:28] 2.11.2.0 32446 98506 106204 151392 1 60 14405735 25165825 4632 130560 0 37436046 99.922 13775418 2550 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-06 10:39:28] CVMFS is ok
[2025-10-06 10:39:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 10:39:28] Checking for apptainer binary...
[2025-10-06 10:39:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 10:39:28] Running /usr/bin/apptainer --version
[2025-10-06 10:39:28] apptainer version 1.3.2-1.el7
[2025-10-06 10:39:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 10:39:53] cg-vwn269.simple-grid.lan
[2025-10-06 10:39:53] apptainer works
[2025-10-06 10:39:53] Set ATHENA_PROC_NUMBER=8
[2025-10-06 10:39:53] Set ATHENA_CORE_NUMBER=8
[2025-10-06 10:39:54] Starting ATLAS job with PandaID=6829875916
[2025-10-06 10:39:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 14:41:14]  *** The last 200 lines of the pilot log: ***
[2025-10-06 14:41:15] 2025-10-06 12:40:05,718 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 14:41:15] 2025-10-06 12:40:05,718 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 14:41:15] 2025-10-06 12:40:05,728 | INFO     | fitting pss+swap vs Time
[2025-10-06 14:41:15] 2025-10-06 12:40:05,728 | INFO     | sum of square deviations: 3531973200.0
[2025-10-06 14:41:15] 2025-10-06 12:40:05,730 | INFO     | sum of deviations: 92734455170.0
[2025-10-06 14:41:15] 2025-10-06 12:40:05,730 | INFO     | mean x: 1759747464.0
[2025-10-06 14:41:15] 2025-10-06 12:40:05,730 | INFO     | mean y: 2408921.728888889
[2025-10-06 14:41:15] 2025-10-06 12:40:05,731 | INFO     | -- intersect: -46201005733.52081
[2025-10-06 14:41:15] 2025-10-06 12:40:05,731 | INFO     | intersect: -46201005733.52081
[2025-10-06 14:41:15] 2025-10-06 12:40:05,731 | INFO     | chi2: 7.219248190018326
[2025-10-06 14:41:15] 2025-10-06 12:40:05,732 | INFO     | sum of square deviations: 3301699115.0
[2025-10-06 14:41:15] 2025-10-06 12:40:05,733 | INFO     | sum of deviations: 105250828772.49998
[2025-10-06 14:41:15] 2025-10-06 12:40:05,734 | INFO     | mean x: 1759747311.5
[2025-10-06 14:41:15] 2025-10-06 12:40:05,734 | INFO     | mean y: 2417033.8227272728
[2025-10-06 14:41:15] 2025-10-06 12:40:05,734 | INFO     | -- intersect: -56094415692.12167
[2025-10-06 14:41:15] 2025-10-06 12:40:05,734 | INFO     | intersect: -56094415692.12167
[2025-10-06 14:41:15] 2025-10-06 12:40:05,734 | INFO     | chi2: 6.511194445591222
[2025-10-06 14:41:15] 2025-10-06 12:40:05,735 | INFO     | current chi2=6.511194445591222 (change=9.807859846210748 %)
[2025-10-06 14:41:15] 2025-10-06 12:40:05,735 | INFO     | right removable region: 219
[2025-10-06 14:41:15] 2025-10-06 12:40:05,735 | INFO     | sum of square deviations: 3301699115.0
[2025-10-06 14:41:15] 2025-10-06 12:40:05,737 | INFO     | sum of deviations: 17693573136.0
[2025-10-06 14:41:15] 2025-10-06 12:40:05,737 | INFO     | mean x: 1759747616.5
[2025-10-06 14:41:15] 2025-10-06 12:40:05,737 | INFO     | mean y: 2458574.727272727
[2025-10-06 14:41:15] 2025-10-06 12:40:05,737 | INFO     | -- intersect: -9427905025.635033
[2025-10-06 14:41:15] 2025-10-06 12:40:05,738 | INFO     | intersect: -9427905025.635033
[2025-10-06 14:41:15] 2025-10-06 12:40:05,738 | INFO     | chi2: 2.575756171437486
[2025-10-06 14:41:15] 2025-10-06 12:40:05,738 | INFO     | current chi2=2.575756171437486 (change=64.32099155423347 %)
[2025-10-06 14:41:15] 2025-10-06 12:40:05,745 | INFO     | sum of square deviations: 3081657780.0
[2025-10-06 14:41:15] 2025-10-06 12:40:05,747 | INFO     | sum of deviations: -25572011422.000004
[2025-10-06 14:41:15] 2025-10-06 12:40:05,747 | INFO     | mean x: 1759747769.0
[2025-10-06 14:41:15] 2025-10-06 12:40:05,747 | INFO     | mean y: 2488413.9720930234
[2025-10-06 14:41:15] 2025-10-06 12:40:05,747 | INFO     | -- intersect: 14605112475.851871
[2025-10-06 14:41:15] 2025-10-06 12:40:05,747 | INFO     | intersect: 14605112475.851871
[2025-10-06 14:41:15] 2025-10-06 12:40:05,748 | INFO     | chi2: 0.9262975662316715
[2025-10-06 14:41:15] 2025-10-06 12:40:05,748 | INFO     | current chi2=0.9262975662316715 (change=64.0378395865506 %)
[2025-10-06 14:41:15] 2025-10-06 12:40:05,748 | INFO     | sum of square deviations: 2871616632.5
[2025-10-06 14:41:15] 2025-10-06 12:40:05,750 | INFO     | sum of deviations: -26028576017.5
[2025-10-06 14:41:15] 2025-10-06 12:40:05,750 | INFO     | mean x: 1759747921.5
[2025-10-06 14:41:15] 2025-10-06 12:40:05,750 | INFO     | mean y: 2488690.3095238097
[2025-10-06 14:41:15] 2025-10-06 12:40:05,750 | INFO     | -- intersect: 15952992677.509275
[2025-10-06 14:41:15] 2025-10-06 12:40:05,750 | INFO     | intersect: 15952992677.509275
[2025-10-06 14:41:15] 2025-10-06 12:40:05,751 | INFO     | chi2: 0.8980218051964587
[2025-10-06 14:41:15] 2025-10-06 12:40:05,751 | INFO     | current chi2=0.8980218051964587 (change=3.0525569823359424 %)
[2025-10-06 14:41:15] 2025-10-06 12:40:05,751 | INFO     | left removable region: 30
[2025-10-06 14:41:15] 2025-10-06 12:40:05,751 | INFO     | sum of square deviations: 2093397390.0
[2025-10-06 14:41:15] 2025-10-06 12:40:05,753 | INFO     | sum of deviations: 5172344024.999998
[2025-10-06 14:41:15] 2025-10-06 12:40:05,753 | INFO     | mean x: 1759748196.0
[2025-10-06 14:41:15] 2025-10-06 12:40:05,753 | INFO     | mean y: 2485219.835978836
[2025-10-06 14:41:15] 2025-10-06 12:40:05,753 | INFO     | -- intersect: -4345481922.267473
[2025-10-06 14:41:15] 2025-10-06 12:40:05,753 | INFO     | intersect: -4345481922.267473
[2025-10-06 14:41:15] 2025-10-06 12:40:05,754 | INFO     | chi2: 0.0012535678935568
[2025-10-06 14:41:15] 2025-10-06 12:40:05,754 | INFO     | -- intersect: -4345481922.267473
[2025-10-06 14:41:15] 2025-10-06 12:40:05,754 | INFO     | current memory leak: 2.47 B/s (using 189 data points, chi2=0.00)
[2025-10-06 14:41:15] 2025-10-06 12:40:05,755 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-06 14:41:15] 2025-10-06 12:40:05,755 | INFO     | ..............................
[2025-10-06 14:41:15] 2025-10-06 12:40:05,755 | INFO     | . Timing measurements:
[2025-10-06 14:41:15] 2025-10-06 12:40:05,755 | INFO     | . get job = 0 s
[2025-10-06 14:41:15] 2025-10-06 12:40:05,755 | INFO     | . initial setup = 7 s
[2025-10-06 14:41:15] 2025-10-06 12:40:05,755 | INFO     | . payload setup = 112 s
[2025-10-06 14:41:15] 2025-10-06 12:40:05,755 | INFO     | . stage-in = 0 s
[2025-10-06 14:41:15] 2025-10-06 12:40:05,756 | INFO     | . payload execution = 13844 s
[2025-10-06 14:41:15] 2025-10-06 12:40:05,756 | INFO     | . stage-out = 4 s
[2025-10-06 14:41:15] 2025-10-06 12:40:05,756 | INFO     | . log creation = 1 s
[2025-10-06 14:41:15] 2025-10-06 12:40:05,756 | INFO     | ..............................
[2025-10-06 14:41:15] 2025-10-06 12:40:05,912 | INFO     | 
[2025-10-06 14:41:15] 2025-10-06 12:40:05,913 | INFO     | job summary report
[2025-10-06 14:41:15] 2025-10-06 12:40:05,913 | INFO     | --------------------------------------------------
[2025-10-06 14:41:15] 2025-10-06 12:40:05,913 | INFO     | PanDA job id: 6829875916
[2025-10-06 14:41:15] 2025-10-06 12:40:05,913 | INFO     | task id: 46376905
[2025-10-06 14:41:15] 2025-10-06 12:40:05,913 | INFO     | errors: (none)
[2025-10-06 14:41:15] 2025-10-06 12:40:05,913 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 14:41:15] 2025-10-06 12:40:05,913 | INFO     | pilot state: finished 
[2025-10-06 14:41:15] 2025-10-06 12:40:05,913 | INFO     | transexitcode: 0
[2025-10-06 14:41:15] 2025-10-06 12:40:05,913 | INFO     | exeerrorcode: 0
[2025-10-06 14:41:15] 2025-10-06 12:40:05,913 | INFO     | exeerrordiag: 
[2025-10-06 14:41:15] 2025-10-06 12:40:05,914 | INFO     | exitcode: 0
[2025-10-06 14:41:15] 2025-10-06 12:40:05,914 | INFO     | exitmsg: OK
[2025-10-06 14:41:15] 2025-10-06 12:40:05,914 | INFO     | cpuconsumptiontime: 48289 s
[2025-10-06 14:41:15] 2025-10-06 12:40:05,914 | INFO     | nevents: 400
[2025-10-06 14:41:15] 2025-10-06 12:40:05,914 | INFO     | neventsw: 0
[2025-10-06 14:41:15] 2025-10-06 12:40:05,914 | INFO     | pid: 11867
[2025-10-06 14:41:15] 2025-10-06 12:40:05,914 | INFO     | pgrp: 11867
[2025-10-06 14:41:15] 2025-10-06 12:40:05,914 | INFO     | corecount: 8
[2025-10-06 14:41:15] 2025-10-06 12:40:05,914 | INFO     | event service: False
[2025-10-06 14:41:15] 2025-10-06 12:40:05,914 | INFO     | sizes: {0: 2347988, 1: 2348674, 2: 2348873, 13: 2348873, 24: 2348929, 34: 2348957, 45: 2349113, 56: 2349141, 67: 2349169, 75: 2349459, 77: 2349487, 13961: 2379755,
[2025-10-06 14:41:15] 2025-10-06 12:40:05,914 | INFO     | --------------------------------------------------
[2025-10-06 14:41:15] 2025-10-06 12:40:05,914 | INFO     | 
[2025-10-06 14:41:15] 2025-10-06 12:40:05,915 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-10-06 14:41:15] 2025-10-06 12:40:06,424 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 14:41:15] 2025-10-06 12:40:06,424 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 14:41:15] 2025-10-06 12:40:06,425 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 14:41:15] 2025-10-06 12:40:06,425 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 14:41:15] 2025-10-06 12:40:06,425 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 14:41:15] 2025-10-06 12:40:06,425 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 14:41:15] 2025-10-06 12:40:06,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 14:41:15] 2025-10-06 12:40:06,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 14:41:15] 2025-10-06 12:40:06,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 14:41:15] 2025-10-06 12:40:06,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 14:41:15] 2025-10-06 12:40:06,426 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 14:41:15] 2025-10-06 12:40:06,426 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 14:41:15] 2025-10-06 12:40:06,426 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 14:41:15] 2025-10-06 12:40:06,426 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 14:41:15] 2025-10-06 12:40:06,426 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 14:41:15] 2025-10-06 12:40:06,426 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 14:41:15] 2025-10-06 12:40:06,426 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 14:41:15] 2025-10-06 12:40:06,426 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 14:41:15] 2025-10-06 12:40:06,426 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 14:41:15] 2025-10-06 12:40:06,427 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 14:41:15] 2025-10-06 12:40:06,427 | INFO     | job 6829875916 has completed (purged errors)
[2025-10-06 14:41:15] 2025-10-06 12:40:06,427 | INFO     | overall cleanup function is called
[2025-10-06 14:41:15] 2025-10-06 12:40:07,436 | INFO     | --- collectZombieJob: --- 10, [11867]
[2025-10-06 14:41:15] 2025-10-06 12:40:07,437 | INFO     | zombie collector waiting for pid 11867
[2025-10-06 14:41:15] 2025-10-06 12:40:07,437 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 14:41:15] 2025-10-06 12:40:07,437 | INFO     | collected zombie processes
[2025-10-06 14:41:15] 2025-10-06 12:40:07,437 | INFO     | will attempt to kill all subprocesses of pid=11867
[2025-10-06 14:41:15] 2025-10-06 12:40:07,566 | INFO     | process IDs to be killed: [11867] (in reverse order)
[2025-10-06 14:41:15] 2025-10-06 12:40:08,202 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 14:41:15] 2025-10-06 12:40:08,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 14:41:15] 2025-10-06 12:40:08,206 | INFO     | did not find any defunct processes belonging to 11867
[2025-10-06 14:41:15] 2025-10-06 12:40:08,209 | INFO     | did not find any defunct processes belonging to 11867
[2025-10-06 14:41:15] 2025-10-06 12:40:08,210 | INFO     | ready for new job
[2025-10-06 14:41:15] 2025-10-06 12:40:08,210 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 14:41:15] 2025-10-06 12:40:08,212 | INFO     | ***************************************
[2025-10-06 14:41:15] 2025-10-06 12:40:08,213 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 14:41:15] 2025-10-06 12:40:08,213 | INFO     | ***************************************
[2025-10-06 14:41:15] 2025-10-06 12:40:08,213 | INFO     | 
[2025-10-06 14:41:15] 2025-10-06 12:40:08,213 | INFO     | pilot is running in a VM
[2025-10-06 14:41:15] 2025-10-06 12:40:08,214 | INFO     | architecture information:
[2025-10-06 14:41:15] 2025-10-06 12:40:08,226 | INFO     | executing command: cat /etc/os-release
[2025-10-06 14:41:15] 2025-10-06 12:40:08,352 | INFO     | cat /etc/os-release:
[2025-10-06 14:41:15] NAME="CentOS Linux"
[2025-10-06 14:41:15] VERSION="7 (Core)"
[2025-10-06 14:41:15] ID="centos"
[2025-10-06 14:41:15] ID_LIKE="rhel fedora"
[2025-10-06 14:41:15] VERSION_ID="7"
[2025-10-06 14:41:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 14:41:15] ANSI_COLOR="0;31"
[2025-10-06 14:41:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 14:41:15] HOME_URL="https://www.centos.org/"
[2025-10-06 14:41:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 14:41:15] 
[2025-10-06 14:41:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 14:41:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 14:41:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 14:41:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 14:41:15] 
[2025-10-06 14:41:15] 2025-10-06 12:40:08,352 | INFO     | ***************************************
[2025-10-06 14:41:15] 2025-10-06 12:40:08,856 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-10-06 14:41:15] 2025-10-06 12:40:08,944 | INFO     | sufficient remaining disk space (493561577472 B)
[2025-10-06 14:41:15] 2025-10-06 12:40:08,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 14:41:15] 2025-10-06 12:40:08,945 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 14:41:15] 2025-10-06 12:40:08,945 | INFO     | update_server=False
[2025-10-06 14:41:15] 2025-10-06 12:40:08,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 14:41:15] 2025-10-06 12:40:08,945 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 14:41:15] 2025-10-06 12:40:08,949 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 14:41:15] 2025-10-06 12:40:08,950 | INFO     | aborting loop
[2025-10-06 14:41:15] 2025-10-06 12:40:09,013 | INFO     | all data control threads have been joined
[2025-10-06 14:41:15] 2025-10-06 12:40:09,025 | INFO     | all job control threads have been joined
[2025-10-06 14:41:15] 2025-10-06 12:40:09,829 | INFO     | all payload control threads have been joined
[2025-10-06 14:41:15] 2025-10-06 12:40:09,951 | INFO     | [job] retrieve thread has finished
[2025-10-06 14:41:15] 2025-10-06 12:40:09,956 | INFO     | [job] job monitor thread has finished
[2025-10-06 14:41:15] 2025-10-06 12:40:09,969 | INFO     | [payload] validate_post thread has finished
[2025-10-06 14:41:15] 2025-10-06 12:40:10,020 | INFO     | [data] control thread has finished
[2025-10-06 14:41:15] 2025-10-06 12:40:10,031 | INFO     | [job] control thread has finished
[2025-10-06 14:41:15] 2025-10-06 12:40:10,482 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 14:41:15] 2025-10-06 12:40:10,482 | INFO     | [job] validate thread has finished
[2025-10-06 14:41:15] 2025-10-06 12:40:10,836 | INFO     | [payload] control thread has finished
[2025-10-06 14:41:15] 2025-10-06 12:40:10,844 | INFO     | [data] copytool_in thread has finished
[2025-10-06 14:41:15] 2025-10-06 12:40:10,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 14:41:15] 2025-10-06 12:40:10,951 | INFO     | [data] copytool_out thread has finished
[2025-10-06 14:41:15] 2025-10-06 12:40:10,998 | INFO     | [payload] failed_post thread has finished
[2025-10-06 14:41:15] 2025-10-06 12:40:11,129 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 14:41:15] 2025-10-06 12:40:11,202 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 14:41:15] 2025-10-06 12:40:11,358 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 14:41:15] 2025-10-06 12:40:11,935 | INFO     | [job] queue monitor thread has finished
[2025-10-06 14:41:15] 2025-10-06 12:40:12,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 14:41:15] 2025-10-06 12:40:16,095 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 14:41:15] 2025-10-06 12:40:38,344 | INFO     | PID=5360 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-06 14:41:15] 2025-10-06 12:40:38,344 | INFO     | .. there are 9 such processes running
[2025-10-06 14:41:15] 2025-10-06 12:40:38,345 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 14:41:15] 2025-10-06 12:40:38,346 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 14:41:15] 2025-10-06 12:40:38,346 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 14:41:15] 2025-10-06 12:41:06,227 | INFO     | [monitor] cgroup control has ended
[2025-10-06 14:41:15] 2025-10-06 12:41:07,300 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139714154235712)>', '<ExcThread(monitor, started 139713700669184)>']
[2025-10-06 14:41:15] 2025-10-06 12:41:07,491 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 14:41:15] 2025-10-06 12:41:07,492 | INFO     | [monitor] control thread has ended
[2025-10-06 14:41:15] 2025-10-06 12:41:12,325 | INFO     | all workflow threads have been joined
[2025-10-06 14:41:15] 2025-10-06 12:41:12,326 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 14:41:15] 2025-10-06 12:41:12,326 | INFO     | traces error code: 0
[2025-10-06 14:41:15] 2025-10-06 12:41:12,326 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 14:41:15] 2025-10-06 12:41:12,626 [wrapper] ==== pilot stdout END ====
[2025-10-06 14:41:15] 2025-10-06 12:41:12,656 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 14:41:15] 2025-10-06 12:41:12,686 [wrapper] pilotpid: 5360
[2025-10-06 14:41:15] 2025-10-06 12:41:12,713 [wrapper] Pilot exit status: 0
[2025-10-06 14:41:15] 2025-10-06 12:41:12,847 [wrapper] pandaids: 6829875916
[2025-10-06 14:41:15] 2025-10-06 12:41:13,130 [wrapper] cleanup supervisor_pilot  3713 5361
[2025-10-06 14:41:15] 2025-10-06 12:41:13,155 [wrapper] Test setup, not cleaning
[2025-10-06 14:41:15] 2025-10-06 12:41:13,186 [wrapper] apfmon messages muted
[2025-10-06 14:41:15] 2025-10-06 12:41:13,248 [wrapper] ==== wrapper stdout END ====
[2025-10-06 14:41:15] 2025-10-06 12:41:13,272 [wrapper] ==== wrapper stderr END ====
[2025-10-06 14:41:15]  *** Error codes and diagnostics ***
[2025-10-06 14:41:15]     "exeErrorCode": 0,
[2025-10-06 14:41:15]     "exeErrorDiag": "",
[2025-10-06 14:41:15]     "pilotErrorCode": 0,
[2025-10-06 14:41:15]     "pilotErrorDiag": "",
[2025-10-06 14:41:15]  *** Listing of results directory ***
[2025-10-06 14:41:15] total 394232
[2025-10-06 14:41:15] -rw-r--r--. 1 boinc boinc    552446 Oct  4 19:03 pilot3.tar.gz
[2025-10-06 14:41:15] -rw-r--r--. 1 boinc boinc      5112 Oct  4 19:17 queuedata.json
[2025-10-06 14:41:15] -rwx------. 1 boinc boinc     36292 Oct  4 19:17 runpilot2-wrapper.sh
[2025-10-06 14:41:15] -rw-r--r--. 1 boinc boinc       100 Oct  6 10:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 14:41:15] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 10:39 run_atlas
[2025-10-06 14:41:15] -rw-r--r--. 1 boinc boinc       105 Oct  6 10:39 job.xml
[2025-10-06 14:41:15] -rw-r--r--. 1 boinc boinc      6390 Oct  6 10:39 init_data.xml
[2025-10-06 14:41:15] -rw-r--r--. 2 boinc boinc 216696094 Oct  6 10:39 EVNT.46376901._002314.pool.root.1
[2025-10-06 14:41:15] -rw-r--r--. 2 boinc boinc     15120 Oct  6 10:39 start_atlas.sh
[2025-10-06 14:41:15] drwxrwx--x. 2 boinc boinc        68 Oct  6 10:39 shared
[2025-10-06 14:41:15] -rw-r--r--. 2 boinc boinc    565607 Oct  6 10:39 input.tar.gz
[2025-10-06 14:41:15] -rw-r--r--. 1 boinc boinc         0 Oct  6 10:39 boinc_lockfile
[2025-10-06 14:41:15] -rw-r--r--. 1 boinc boinc      2519 Oct  6 10:39 pandaJob.out
[2025-10-06 14:41:15] -rw-------. 1 boinc boinc    975027 Oct  6 10:43 agis_schedconf.cvmfs.json
[2025-10-06 14:41:15] drwx------. 4 boinc boinc      4096 Oct  6 10:43 pilot3
[2025-10-06 14:41:15] -rw-------. 1 boinc boinc 178466477 Oct  6 14:37 HITS.46376905._063939.pool.root.1
[2025-10-06 14:41:15] -rw-r--r--. 1 boinc boinc       531 Oct  6 14:38 boinc_task_state.xml
[2025-10-06 14:41:15] -rw-------. 1 boinc boinc      1013 Oct  6 14:38 memory_monitor_summary.json
[2025-10-06 14:41:15] -rw-------. 1 boinc boinc   1560401 Oct  6 14:38 agis_ddmendpoints.agis.ALL.json
[2025-10-06 14:41:15] -rw-------. 1 boinc boinc    442875 Oct  6 14:38 log.46376905._063939.job.log.tgz.1
[2025-10-06 14:41:15] -rw-------. 1 boinc boinc      7771 Oct  6 14:40 heartbeat.json
[2025-10-06 14:41:15] -rw-------. 1 boinc boinc        95 Oct  6 14:40 pilot_heartbeat.json
[2025-10-06 14:41:15] -rw-r--r--. 1 boinc boinc        28 Oct  6 14:40 wrapper_checkpoint.txt
[2025-10-06 14:41:15] -rw-r--r--. 1 boinc boinc      8192 Oct  6 14:40 boinc_mmap_file
[2025-10-06 14:41:15] -rw-------. 1 boinc boinc      4884 Oct  6 14:41 pilotlog.txt
[2025-10-06 14:41:15] -rw-------. 1 boinc boinc   1887823 Oct  6 14:41 log.46376905._063939.job.log.1
[2025-10-06 14:41:15] -rw-------. 1 boinc boinc       357 Oct  6 14:41 output.list
[2025-10-06 14:41:15] -rw-r--r--. 1 boinc boinc       620 Oct  6 14:41 runtime_log
[2025-10-06 14:41:15] -rw-------. 1 boinc boinc   2344960 Oct  6 14:41 result.tar.gz
[2025-10-06 14:41:15] -rw-r--r--. 1 boinc boinc      8717 Oct  6 14:41 runtime_log.err
[2025-10-06 14:41:15] -rw-------. 1 boinc boinc       656 Oct  6 14:41 NJkMDmK4KP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmaxDMDmXkeNRn.diag
[2025-10-06 14:41:15] -rw-r--r--. 1 boinc boinc     20601 Oct  6 14:41 stderr.txt
[2025-10-06 14:41:15] HITS file was successfully produced:
[2025-10-06 14:41:15] -rw-------. 1 boinc boinc 178466477 Oct  6 14:37 shared/HITS.pool.root.1
[2025-10-06 14:41:15]  *** Contents of shared directory: ***
[2025-10-06 14:41:15] total 388768
[2025-10-06 14:41:15] -rw-r--r--. 2 boinc boinc 216696094 Oct  6 10:39 ATLAS.root_0
[2025-10-06 14:41:15] -rw-r--r--. 2 boinc boinc     15120 Oct  6 10:39 start_atlas.sh
[2025-10-06 14:41:15] -rw-r--r--. 2 boinc boinc    565607 Oct  6 10:39 input.tar.gz
[2025-10-06 14:41:15] -rw-------. 1 boinc boinc 178466477 Oct  6 14:37 HITS.pool.root.1
[2025-10-06 14:41:15] -rw-------. 1 boinc boinc   2344960 Oct  6 14:41 result.tar.gz
14:41:16 (1538): run_atlas exited; CPU time 48486.157303
14:41:16 (1538): called boinc_finish(0)

</stderr_txt>
]]>

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