Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:24:56 (2222467): wrapper (7.7.26015): starting
13:24:56 (2222467): wrapper: running run_atlas (--nthreads 4)
[2025-10-05 13:24:56] Arguments: --nthreads 4
[2025-10-05 13:24:56] Threads: 4
[2025-10-05 13:24:56] Checking for CVMFS
[2025-10-05 13:24:56] No cvmfs_config command found, will try listing directly
[2025-10-05 13:24:56] CVMFS is ok
[2025-10-05 13:24:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-05 13:24:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-05 13:24:56] Further information can be found at the LHC@home message board.
[2025-10-05 13:24:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-05 13:24:56] Checking for apptainer binary...
[2025-10-05 13:24:56] which: no apptainer in ((null))
[2025-10-05 13:24:56] apptainer is not installed, using version from CVMFS
[2025-10-05 13:24:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-05 13:24:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-10-05 13:24:56] apptainer works
[2025-10-05 13:24:56] Set ATHENA_PROC_NUMBER=4
[2025-10-05 13:24:56] Set ATHENA_CORE_NUMBER=4
[2025-10-05 13:24:56] Starting ATLAS job with PandaID=6829689755
[2025-10-05 13:24:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:07:22 (2558765): wrapper (7.7.26015): starting
16:07:22 (2558765): wrapper: running run_atlas (--nthreads 4)
[2025-10-05 16:07:22] Arguments: --nthreads 4
[2025-10-05 16:07:22] Threads: 4
[2025-10-05 16:07:22] This job has been restarted, cleaning up previous attempt
[2025-10-05 16:07:22] Checking for CVMFS
[2025-10-05 16:07:22] No cvmfs_config command found, will try listing directly
[2025-10-05 16:07:22] CVMFS is ok
[2025-10-05 16:07:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-05 16:07:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-05 16:07:22] Further information can be found at the LHC@home message board.
[2025-10-05 16:07:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-05 16:07:22] Checking for apptainer binary...
[2025-10-05 16:07:22] which: no apptainer in ((null))
[2025-10-05 16:07:22] apptainer is not installed, using version from CVMFS
[2025-10-05 16:07:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-05 16:07:23] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-10-05 16:07:23] apptainer works
[2025-10-05 16:07:23] Set ATHENA_PROC_NUMBER=4
[2025-10-05 16:07:23] Set ATHENA_CORE_NUMBER=4
[2025-10-05 16:07:23] Starting ATLAS job with PandaID=6829689755
[2025-10-05 16:07:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-05 19:07:16]  *** The last 200 lines of the pilot log: ***
[2025-10-05 19:07:16] 2025-10-05 16:44:03,580 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 19:07:16] 2025-10-05 16:44:03,581 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 19:07:16] 2025-10-05 16:44:03,584 | INFO     | fitting pss+swap vs Time
[2025-10-05 19:07:16] 2025-10-05 16:44:03,584 | INFO     | sum of square deviations: 1132458442.5
[2025-10-05 19:07:16] 2025-10-05 16:44:03,585 | INFO     | sum of deviations: 10970730989.000013
[2025-10-05 19:07:16] 2025-10-05 16:44:03,586 | INFO     | mean x: 1759677948.5
[2025-10-05 19:07:16] 2025-10-05 16:44:03,586 | INFO     | mean y: 2278995.337662338
[2025-10-05 19:07:16] 2025-10-05 16:44:03,586 | INFO     | -- intersect: -17044663016.637245
[2025-10-05 19:07:16] 2025-10-05 16:44:03,586 | INFO     | intersect: -17044663016.637245
[2025-10-05 19:07:16] 2025-10-05 16:44:03,586 | INFO     | chi2: 2.1228972759152662
[2025-10-05 19:07:16] 2025-10-05 16:44:03,586 | INFO     | sum of square deviations: 1025693650.0
[2025-10-05 19:07:16] 2025-10-05 16:44:03,587 | INFO     | sum of deviations: 20018673413.999996
[2025-10-05 19:07:16] 2025-10-05 16:44:03,587 | INFO     | mean x: 1759677796.0
[2025-10-05 19:07:16] 2025-10-05 16:44:03,587 | INFO     | mean y: 2291557.5838926174
[2025-10-05 19:07:16] 2025-10-05 16:44:03,587 | INFO     | -- intersect: -34341701029.277992
[2025-10-05 19:07:16] 2025-10-05 16:44:03,588 | INFO     | intersect: -34341701029.277992
[2025-10-05 19:07:16] 2025-10-05 16:44:03,588 | INFO     | chi2: 1.312334633328036
[2025-10-05 19:07:16] 2025-10-05 16:44:03,588 | INFO     | current chi2=1.312334633328036 (change=38.1819060103963 %)
[2025-10-05 19:07:16] 2025-10-05 16:44:03,588 | INFO     | sum of square deviations: 925859220.0
[2025-10-05 19:07:16] 2025-10-05 16:44:03,589 | INFO     | sum of deviations: 19206232073.499992
[2025-10-05 19:07:16] 2025-10-05 16:44:03,589 | INFO     | mean x: 1759677643.5
[2025-10-05 19:07:16] 2025-10-05 16:44:03,589 | INFO     | mean y: 2290315.6180555555
[2025-10-05 19:07:16] 2025-10-05 16:44:03,589 | INFO     | -- intersect: -36500858830.11339
[2025-10-05 19:07:16] 2025-10-05 16:44:03,589 | INFO     | intersect: -36500858830.11339
[2025-10-05 19:07:16] 2025-10-05 16:44:03,589 | INFO     | chi2: 1.3134768728720316
[2025-10-05 19:07:16] 2025-10-05 16:44:03,590 | INFO     | current chi2=1.3134768728720316 (change=-0.08703874110973099 %)
[2025-10-05 19:07:16] 2025-10-05 16:44:03,590 | INFO     | right removable region: 143
[2025-10-05 19:07:16] 2025-10-05 16:44:03,590 | INFO     | sum of square deviations: 1025693650.0
[2025-10-05 19:07:16] 2025-10-05 16:44:03,591 | INFO     | sum of deviations: -7985737835.0
[2025-10-05 19:07:16] 2025-10-05 16:44:03,591 | INFO     | mean x: 1759678101.0
[2025-10-05 19:07:16] 2025-10-05 16:44:03,591 | INFO     | mean y: 2305609.8389261747
[2025-10-05 19:07:16] 2025-10-05 16:44:03,591 | INFO     | -- intersect: 13702622452.569357
[2025-10-05 19:07:16] 2025-10-05 16:44:03,591 | INFO     | intersect: 13702622452.569357
[2025-10-05 19:07:16] 2025-10-05 16:44:03,591 | INFO     | chi2: 0.8419000441818808
[2025-10-05 19:07:16] 2025-10-05 16:44:03,591 | INFO     | current chi2=0.8419000441818808 (change=60.34193205043783 %)
[2025-10-05 19:07:16] 2025-10-05 16:44:03,592 | INFO     | sum of square deviations: 925859220.0
[2025-10-05 19:07:16] 2025-10-05 16:44:03,592 | INFO     | sum of deviations: -6719737643.5
[2025-10-05 19:07:16] 2025-10-05 16:44:03,592 | INFO     | mean x: 1759678253.5
[2025-10-05 19:07:16] 2025-10-05 16:44:03,593 | INFO     | mean y: 2303706.3819444445
[2025-10-05 19:07:16] 2025-10-05 16:44:03,593 | INFO     | -- intersect: 12773766089.715218
[2025-10-05 19:07:16] 2025-10-05 16:44:03,593 | INFO     | intersect: 12773766089.715218
[2025-10-05 19:07:16] 2025-10-05 16:44:03,593 | INFO     | chi2: 0.8372403629023878
[2025-10-05 19:07:16] 2025-10-05 16:44:03,593 | INFO     | current chi2=0.8372403629023878 (change=0.5534720317090697 %)
[2025-10-05 19:07:16] 2025-10-05 16:44:03,593 | INFO     | left removable region: 20
[2025-10-05 19:07:16] 2025-10-05 16:44:03,593 | INFO     | sum of square deviations: 576985702.0
[2025-10-05 19:07:16] 2025-10-05 16:44:03,594 | INFO     | sum of deviations: 1383169449.0000005
[2025-10-05 19:07:16] 2025-10-05 16:44:03,594 | INFO     | mean x: 1759678223.0
[2025-10-05 19:07:16] 2025-10-05 16:44:03,594 | INFO     | mean y: 2319016.4552845526
[2025-10-05 19:07:16] 2025-10-05 16:44:03,594 | INFO     | -- intersect: -4216040554.132844
[2025-10-05 19:07:16] 2025-10-05 16:44:03,594 | INFO     | intersect: -4216040554.132844
[2025-10-05 19:07:16] 2025-10-05 16:44:03,594 | INFO     | chi2: 0.00022144855794744013
[2025-10-05 19:07:16] 2025-10-05 16:44:03,595 | INFO     | -- intersect: -4216040554.132844
[2025-10-05 19:07:16] 2025-10-05 16:44:03,595 | INFO     | current memory leak: 2.40 B/s (using 123 data points, chi2=0.00)
[2025-10-05 19:07:16] 2025-10-05 16:44:03,595 | INFO     | could have reported an average CPU frequency of 2627 MHz (9 samples)
[2025-10-05 19:07:16] 2025-10-05 16:44:03,595 | INFO     | ..............................
[2025-10-05 19:07:16] 2025-10-05 16:44:03,595 | INFO     | . Timing measurements:
[2025-10-05 19:07:16] 2025-10-05 16:44:03,596 | INFO     | . get job = 0 s
[2025-10-05 19:07:16] 2025-10-05 16:44:03,596 | INFO     | . initial setup = 1 s
[2025-10-05 19:07:16] 2025-10-05 16:44:03,596 | INFO     | . payload setup = 6 s
[2025-10-05 19:07:16] 2025-10-05 16:44:03,596 | INFO     | . stage-in = 0 s
[2025-10-05 19:07:16] 2025-10-05 16:44:03,596 | INFO     | . payload execution = 9357 s
[2025-10-05 19:07:16] 2025-10-05 16:44:03,596 | INFO     | . stage-out = 1 s
[2025-10-05 19:07:16] 2025-10-05 16:44:03,596 | INFO     | . log creation = 0 s
[2025-10-05 19:07:16] 2025-10-05 16:44:03,596 | INFO     | ..............................
[2025-10-05 19:07:16] 2025-10-05 16:44:04,033 | INFO     | 
[2025-10-05 19:07:16] 2025-10-05 16:44:04,034 | INFO     | job summary report
[2025-10-05 19:07:16] 2025-10-05 16:44:04,036 | INFO     | --------------------------------------------------
[2025-10-05 19:07:16] 2025-10-05 16:44:04,036 | INFO     | PanDA job id: 6829689755
[2025-10-05 19:07:16] 2025-10-05 16:44:04,036 | INFO     | task id: 46376905
[2025-10-05 19:07:16] 2025-10-05 16:44:04,036 | INFO     | errors: (none)
[2025-10-05 19:07:16] 2025-10-05 16:44:04,036 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-05 19:07:16] 2025-10-05 16:44:04,036 | INFO     | pilot state: finished 
[2025-10-05 19:07:16] 2025-10-05 16:44:04,036 | INFO     | transexitcode: 0
[2025-10-05 19:07:16] 2025-10-05 16:44:04,036 | INFO     | exeerrorcode: 0
[2025-10-05 19:07:16] 2025-10-05 16:44:04,036 | INFO     | exeerrordiag: 
[2025-10-05 19:07:16] 2025-10-05 16:44:04,036 | INFO     | exitcode: 0
[2025-10-05 19:07:16] 2025-10-05 16:44:04,037 | INFO     | exitmsg: OK
[2025-10-05 19:07:16] 2025-10-05 16:44:04,037 | INFO     | cpuconsumptiontime: 36045 s
[2025-10-05 19:07:16] 2025-10-05 16:44:04,037 | INFO     | nevents: 400
[2025-10-05 19:07:16] 2025-10-05 16:44:04,037 | INFO     | neventsw: 0
[2025-10-05 19:07:16] 2025-10-05 16:44:04,037 | INFO     | pid: 2575519
[2025-10-05 19:07:16] 2025-10-05 16:44:04,037 | INFO     | pgrp: 2575519
[2025-10-05 19:07:16] 2025-10-05 16:44:04,037 | INFO     | corecount: 4
[2025-10-05 19:07:16] 2025-10-05 16:44:04,037 | INFO     | event service: False
[2025-10-05 19:07:16] 2025-10-05 16:44:04,037 | INFO     | sizes: {0: 2348656, 1: 2348855, 6: 2349117, 11: 2349145, 9368: 2377466, 9369: 2386670, 9374: 2386872}
[2025-10-05 19:07:16] 2025-10-05 16:44:04,037 | INFO     | --------------------------------------------------
[2025-10-05 19:07:16] 2025-10-05 16:44:04,037 | INFO     | 
[2025-10-05 19:07:16] 2025-10-05 16:44:04,038 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-10-05 19:07:16] 2025-10-05 16:44:04,060 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-05 19:07:16] 2025-10-05 16:44:04,060 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-05 19:07:16] 2025-10-05 16:44:04,060 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-05 19:07:16] 2025-10-05 16:44:04,060 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-05 19:07:16] 2025-10-05 16:44:04,060 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-05 19:07:16] 2025-10-05 16:44:04,061 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-05 19:07:16] 2025-10-05 16:44:04,061 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-05 19:07:16] 2025-10-05 16:44:04,061 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-05 19:07:16] 2025-10-05 16:44:04,061 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-05 19:07:16] 2025-10-05 16:44:04,061 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-05 19:07:16] 2025-10-05 16:44:04,061 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-05 19:07:16] 2025-10-05 16:44:04,061 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-05 19:07:16] 2025-10-05 16:44:04,061 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-05 19:07:16] 2025-10-05 16:44:04,061 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-05 19:07:16] 2025-10-05 16:44:04,061 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-05 19:07:16] 2025-10-05 16:44:04,061 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-05 19:07:16] 2025-10-05 16:44:04,061 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-05 19:07:16] 2025-10-05 16:44:04,061 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-05 19:07:16] 2025-10-05 16:44:04,062 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-05 19:07:16] 2025-10-05 16:44:04,062 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-05 19:07:16] 2025-10-05 16:44:04,062 | INFO     | job 6829689755 has completed (purged errors)
[2025-10-05 19:07:16] 2025-10-05 16:44:04,062 | INFO     | overall cleanup function is called
[2025-10-05 19:07:16] 2025-10-05 16:44:05,070 | INFO     | --- collectZombieJob: --- 10, [2575519]
[2025-10-05 19:07:16] 2025-10-05 16:44:05,070 | INFO     | zombie collector waiting for pid 2575519
[2025-10-05 19:07:16] 2025-10-05 16:44:05,070 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-05 19:07:16] 2025-10-05 16:44:05,070 | INFO     | collected zombie processes
[2025-10-05 19:07:16] 2025-10-05 16:44:05,070 | INFO     | will attempt to kill all subprocesses of pid=2575519
[2025-10-05 19:07:16] 2025-10-05 16:44:05,424 | INFO     | process IDs to be killed: [2575519] (in reverse order)
[2025-10-05 19:07:16] 2025-10-05 16:44:05,542 | WARNING  | found no corresponding commands to process id(s)
[2025-10-05 19:07:16] 2025-10-05 16:44:05,543 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-05 19:07:16] 2025-10-05 16:44:05,554 | INFO     | did not find any defunct processes belonging to 2575519
[2025-10-05 19:07:16] 2025-10-05 16:44:05,566 | INFO     | did not find any defunct processes belonging to 2575519
[2025-10-05 19:07:16] 2025-10-05 16:44:05,567 | INFO     | ready for new job
[2025-10-05 19:07:16] 2025-10-05 16:44:05,567 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-05 19:07:16] 2025-10-05 16:44:05,569 | INFO     | ***************************************
[2025-10-05 19:07:16] 2025-10-05 16:44:05,569 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-05 19:07:16] 2025-10-05 16:44:05,569 | INFO     | ***************************************
[2025-10-05 19:07:16] 2025-10-05 16:44:05,569 | INFO     | 
[2025-10-05 19:07:16] 2025-10-05 16:44:05,573 | INFO     | architecture information:
[2025-10-05 19:07:16] 2025-10-05 16:44:05,573 | INFO     | executing command: cat /etc/os-release
[2025-10-05 19:07:16] 2025-10-05 16:44:05,590 | INFO     | cat /etc/os-release:
[2025-10-05 19:07:16] NAME="CentOS Linux"
[2025-10-05 19:07:16] VERSION="7 (Core)"
[2025-10-05 19:07:16] ID="centos"
[2025-10-05 19:07:16] ID_LIKE="rhel fedora"
[2025-10-05 19:07:16] VERSION_ID="7"
[2025-10-05 19:07:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-05 19:07:16] ANSI_COLOR="0;31"
[2025-10-05 19:07:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-05 19:07:16] HOME_URL="https://www.centos.org/"
[2025-10-05 19:07:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-05 19:07:16] 
[2025-10-05 19:07:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-05 19:07:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-05 19:07:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-05 19:07:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-05 19:07:16] 
[2025-10-05 19:07:16] 2025-10-05 16:44:05,591 | INFO     | ***************************************
[2025-10-05 19:07:16] 2025-10-05 16:44:06,094 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-10-05 19:07:16] 2025-10-05 16:44:06,111 | INFO     | sufficient remaining disk space (687929819136 B)
[2025-10-05 19:07:16] 2025-10-05 16:44:06,111 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-05 19:07:16] 2025-10-05 16:44:06,111 | INFO     | current server update state: UPDATING_FINAL
[2025-10-05 19:07:16] 2025-10-05 16:44:06,112 | INFO     | update_server=False
[2025-10-05 19:07:16] 2025-10-05 16:44:06,112 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-05 19:07:16] 2025-10-05 16:44:06,112 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-05 19:07:16] 2025-10-05 16:44:06,112 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-05 19:07:16] 2025-10-05 16:44:06,112 | INFO     | aborting loop
[2025-10-05 19:07:16] 2025-10-05 16:44:06,670 | INFO     | all data control threads have been joined
[2025-10-05 19:07:16] 2025-10-05 16:44:07,094 | INFO     | all job control threads have been joined
[2025-10-05 19:07:16] 2025-10-05 16:44:07,115 | INFO     | [job] retrieve thread has finished
[2025-10-05 19:07:16] 2025-10-05 16:44:07,115 | INFO     | [job] job monitor thread has finished
[2025-10-05 19:07:16] 2025-10-05 16:44:07,173 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-05 19:07:16] 2025-10-05 16:44:07,260 | INFO     | [payload] failed_post thread has finished
[2025-10-05 19:07:16] 2025-10-05 16:44:07,370 | INFO     | [payload] validate_pre thread has finished
[2025-10-05 19:07:16] 2025-10-05 16:44:07,477 | INFO     | all payload control threads have been joined
[2025-10-05 19:07:16] 2025-10-05 16:44:07,675 | INFO     | [data] copytool_in thread has finished
[2025-10-05 19:07:16] 2025-10-05 16:44:07,676 | INFO     | [data] control thread has finished
[2025-10-05 19:07:16] 2025-10-05 16:44:07,684 | INFO     | [payload] execute_payloads thread has finished
[2025-10-05 19:07:16] 2025-10-05 16:44:08,100 | INFO     | [job] control thread has finished
[2025-10-05 19:07:16] 2025-10-05 16:44:08,370 | INFO     | [payload] validate_post thread has finished
[2025-10-05 19:07:16] 2025-10-05 16:44:08,483 | INFO     | [payload] control thread has finished
[2025-10-05 19:07:16] 2025-10-05 16:44:08,537 | INFO     | [job] validate thread has finished
[2025-10-05 19:07:16] 2025-10-05 16:44:08,553 | INFO     | [job] create_data_payload thread has finished
[2025-10-05 19:07:16] 2025-10-05 16:44:08,698 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-05 19:07:16] 2025-10-05 16:44:09,175 | INFO     | [data] copytool_out thread has finished
[2025-10-05 19:07:16] 2025-10-05 16:44:09,704 | INFO     | [job] queue monitor thread has finished
[2025-10-05 19:07:16] 2025-10-05 16:44:10,118 | INFO     | [data] queue_monitor thread has finished
[2025-10-05 19:07:16] 2025-10-05 16:44:16,389 | INFO     | job.realtimelogging is not enabled
[2025-10-05 19:07:16] 2025-10-05 16:44:17,394 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-05 19:07:16] 2025-10-05 16:44:36,824 | INFO     | PID=2562558 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-05 19:07:16] 2025-10-05 16:44:36,824 | INFO     | .. there are 9 such processes running
[2025-10-05 19:07:16] 2025-10-05 16:44:36,825 | INFO     | found 0 job(s) in 20 queues
[2025-10-05 19:07:16] 2025-10-05 16:44:36,825 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-05 19:07:16] 2025-10-05 16:44:36,825 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-05 19:07:16] 2025-10-05 16:44:48,382 | INFO     | [monitor] cgroup control has ended
[2025-10-05 19:07:16] 2025-10-05 16:44:48,655 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22965668071232)>', '<ExcThread(monitor, started 22965433366272)>']
[2025-10-05 19:07:16] 2025-10-05 16:44:48,884 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-05 19:07:16] 2025-10-05 16:44:48,885 | INFO     | [monitor] control thread has ended
[2025-10-05 19:07:16] 2025-10-05 16:44:53,680 | INFO     | all workflow threads have been joined
[2025-10-05 19:07:16] 2025-10-05 16:44:53,681 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-05 19:07:16] 2025-10-05 16:44:53,681 | INFO     | traces error code: 0
[2025-10-05 19:07:16] 2025-10-05 16:44:53,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-05 19:07:16] 2025-10-05 16:44:53,847 [wrapper] ==== pilot stdout END ====
[2025-10-05 19:07:16] 2025-10-05 16:44:53,850 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-05 19:07:16] 2025-10-05 16:44:53,852 [wrapper] pilotpid: 2562558
[2025-10-05 19:07:16] 2025-10-05 16:44:53,855 [wrapper] Pilot exit status: 0
[2025-10-05 19:07:16] 2025-10-05 16:44:53,866 [wrapper] pandaids: 6829689755 6829689755
[2025-10-05 19:07:16] 2025-10-05 16:44:53,937 [wrapper] cleanup supervisor_pilot 2865122 2562559
[2025-10-05 19:07:16] 2025-10-05 16:44:53,940 [wrapper] Test setup, not cleaning
[2025-10-05 19:07:16] 2025-10-05 16:44:53,943 [wrapper] apfmon messages muted
[2025-10-05 19:07:16] 2025-10-05 16:44:53,946 [wrapper] ==== wrapper stdout END ====
[2025-10-05 19:07:16] 2025-10-05 16:44:53,948 [wrapper] ==== wrapper stderr END ====
[2025-10-05 19:07:16]  *** Error codes and diagnostics ***
[2025-10-05 19:07:16]     "exeErrorCode": 0,
[2025-10-05 19:07:16]     "exeErrorDiag": "",
[2025-10-05 19:07:16]     "pilotErrorCode": 0,
[2025-10-05 19:07:16]     "pilotErrorDiag": "",
[2025-10-05 19:07:16]  *** Listing of results directory ***
[2025-10-05 19:07:16] total 600724
[2025-10-05 19:07:16] drwx------ 4 boinc boinc      4096 Jul 31 15:00 pilot3
[2025-10-05 19:07:16] -rw-r--r-- 1 boinc boinc    552446 Oct  4 15:47 pilot3.tar.gz
[2025-10-05 19:07:16] -rwx------ 1 boinc boinc     36292 Oct  4 15:49 runpilot2-wrapper.sh
[2025-10-05 19:07:16] -rw-r--r-- 1 boinc boinc      5112 Oct  4 15:49 queuedata.json
[2025-10-05 19:07:16] -rw-r--r-- 1 boinc boinc       100 Oct  5 13:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-05 19:07:16] -rwxr-xr-x 1 boinc boinc      7986 Oct  5 13:24 run_atlas
[2025-10-05 19:07:16] -rw-r--r-- 1 boinc boinc       105 Oct  5 13:24 job.xml
[2025-10-05 19:07:16] -rw-r--r-- 3 boinc boinc 216483131 Oct  5 13:24 EVNT.46376901._002204.pool.root.1
[2025-10-05 19:07:16] -rw-r--r-- 3 boinc boinc 216483131 Oct  5 13:24 ATLAS.root_0
[2025-10-05 19:07:16] -rw-r--r-- 2 boinc boinc     15120 Oct  5 13:24 start_atlas.sh
[2025-10-05 19:07:16] drwxrwx--x 2 boinc boinc      4096 Oct  5 13:24 shared
[2025-10-05 19:07:16] -rw-r--r-- 2 boinc boinc    565599 Oct  5 13:24 input.tar.gz
[2025-10-05 19:07:16] -rw-r--r-- 1 boinc boinc         0 Oct  5 13:24 boinc_lockfile
[2025-10-05 19:07:16] -rw-r--r-- 1 boinc boinc      6641 Oct  5 16:07 init_data.xml
[2025-10-05 19:07:16] -rw-r--r-- 1 boinc boinc      2519 Oct  5 16:07 pandaJob.out
[2025-10-05 19:07:16] -rw------- 1 boinc boinc    973982 Oct  5 16:07 agis_schedconf.cvmfs.json
[2025-10-05 19:07:16] -rw------- 1 boinc boinc 174936552 Oct  5 18:43 HITS.46376905._061137.pool.root.1
[2025-10-05 19:07:16] -rw-r--r-- 1 boinc boinc       529 Oct  5 18:43 boinc_task_state.xml
[2025-10-05 19:07:16] -rw------- 1 boinc boinc      1032 Oct  5 18:43 memory_monitor_summary.json
[2025-10-05 19:07:16] -rw------- 1 boinc boinc   1560401 Oct  5 18:43 agis_ddmendpoints.agis.ALL.json
[2025-10-05 19:07:16] -rw------- 1 boinc boinc    329438 Oct  5 18:43 log.46376905._061137.job.log.tgz.1
[2025-10-05 19:07:16] -rw------- 1 boinc boinc      7821 Oct  5 18:44 heartbeat.json
[2025-10-05 19:07:16] -rw------- 1 boinc boinc        97 Oct  5 18:44 pilot_heartbeat.json
[2025-10-05 19:07:16] -rw------- 1 boinc boinc      4905 Oct  5 18:44 pilotlog.txt
[2025-10-05 19:07:16] -rw------- 1 boinc boinc   1343357 Oct  5 18:44 log.46376905._061137.job.log.1
[2025-10-05 19:07:16] -rw------- 1 boinc boinc       357 Oct  5 18:44 output.list
[2025-10-05 19:07:16] -rw-r--r-- 1 boinc boinc       620 Oct  5 18:44 runtime_log
[2025-10-05 19:07:16] -rw------- 1 boinc boinc   1689600 Oct  5 18:44 result.tar.gz
[2025-10-05 19:07:16] -rw-r--r-- 1 boinc boinc      9146 Oct  5 18:44 runtime_log.err
[2025-10-05 19:07:16] -rw------- 1 boinc boinc       788 Oct  5 18:44 eGONDm8oHP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRfDMDmxDeBEo.diag
[2025-10-05 19:07:16] -rw-r--r-- 1 boinc boinc        27 Oct  5 19:06 wrapper_checkpoint.txt
[2025-10-05 19:07:16] -rw-r--r-- 1 boinc boinc      8192 Oct  5 19:07 boinc_mmap_file
[2025-10-05 19:07:16] -rw-r--r-- 1 boinc boinc     22576 Oct  5 19:07 stderr.txt
[2025-10-05 19:07:16] HITS file was successfully produced:
[2025-10-05 19:07:16] -rw------- 1 boinc boinc 174936552 Oct  5 18:43 shared/HITS.pool.root.1
[2025-10-05 19:07:16]  *** Contents of shared directory: ***
[2025-10-05 19:07:16] total 384484
[2025-10-05 19:07:16] -rw-r--r-- 3 boinc boinc 216483131 Oct  5 13:24 ATLAS.root_0
[2025-10-05 19:07:16] -rw-r--r-- 2 boinc boinc     15120 Oct  5 13:24 start_atlas.sh
[2025-10-05 19:07:16] -rw-r--r-- 2 boinc boinc    565599 Oct  5 13:24 input.tar.gz
[2025-10-05 19:07:16] -rw------- 1 boinc boinc 174936552 Oct  5 18:43 HITS.pool.root.1
[2025-10-05 19:07:16] -rw------- 1 boinc boinc   1689600 Oct  5 18:44 result.tar.gz
19:07:18 (2558765): run_atlas exited; CPU time 36389.972452
19:07:18 (2558765): called boinc_finish(0)

</stderr_txt>
]]>

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