Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
20:18:38 (74988): wrapper (7.7.26015): starting
20:18:38 (74988): wrapper: running run_atlas (--nthreads 4)
[2025-10-04 20:18:38] Arguments: --nthreads 4
[2025-10-04 20:18:38] Threads: 4
[2025-10-04 20:18:38] Checking for CVMFS
[2025-10-04 20:18:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-04 20:18:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-04 20:18:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-04 20:18:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-04 20:18:39] 2.13.2.0 3306694 4412 47856 151338 1 57 3174900 4096001 6461 130560 0 26851899 99.999 156605 795 http://cvmfs-egi.gridpp.rl.ac.uk:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-04 20:18:39] CVMFS is ok
[2025-10-04 20:18:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-04 20:18:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-04 20:18:39] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-04 20:18:39] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-04 20:18:39] Further information can be found at the LHC@home message board.
[2025-10-04 20:18:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-04 20:18:39] Checking for apptainer binary...
[2025-10-04 20:18:39] apptainer is not installed, using version from CVMFS
[2025-10-04 20:18:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-04 20:18:39] minis
[2025-10-04 20:18:39] apptainer works
[2025-10-04 20:18:39] Set ATHENA_PROC_NUMBER=4
[2025-10-04 20:18:39] Set ATHENA_CORE_NUMBER=4
[2025-10-04 20:18:39] Starting ATLAS job with PandaID=6829514580
[2025-10-04 20:18:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-04 21:55:02]  *** The last 200 lines of the pilot log: ***
[2025-10-04 21:55:02]  storage_token=
[2025-10-04 21:55:02]  surl=/var/lib/boinc-client/slots/4/PanDA_Pilot-6829514580/log.46376905._057592.job.log.tgz.1
[2025-10-04 21:55:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f0/59/log.46376905._057592.job.log.tgz.1
[2025-10-04 21:55:02]  workdir=None
[2025-10-04 21:55:02] ]
[2025-10-04 21:55:02] 2025-10-04 20:54:18,889 | INFO     | transferring file log.46376905._057592.job.log.tgz.1 from /var/lib/boinc-client/slots/4/PanDA_Pilot-6829514580/log.46376905._057592.job.log.tgz.1 to /var/lib/boinc
[2025-10-04 21:55:02] 2025-10-04 20:54:18,889 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/4/PanDA_Pilot-6829514580/log.46376905._057592.job.log.tgz.1 /var/lib/boinc-client/slots/4/log.463769
[2025-10-04 21:55:02] 2025-10-04 20:54:18,904 | INFO     | adding to output.list: log.46376905._057592.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f0/59/log.46376905._057592.job.log.tg
[2025-10-04 21:55:02] 2025-10-04 20:54:18,904 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-04 21:55:02] 2025-10-04 20:54:18,904 | INFO     | summary of transferred files:
[2025-10-04 21:55:02] 2025-10-04 20:54:18,904 | INFO     |  -- lfn=log.46376905._057592.job.log.tgz.1, status_code=0, status=transferred
[2025-10-04 21:55:02] 2025-10-04 20:54:18,905 | INFO     | stage-out finished correctly
[2025-10-04 21:55:02] 2025-10-04 20:54:20,397 | INFO     | time since job start (5733s) is within the limit (172800.0s)
[2025-10-04 21:55:02] 2025-10-04 20:54:20,914 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-04 21:55:02] 2025-10-04 20:54:22,401 | INFO     | time since job start (5735s) is within the limit (172800.0s)
[2025-10-04 21:55:02] 2025-10-04 20:54:23,941 | INFO     | job 6829514580 has state=finished
[2025-10-04 21:55:02] 2025-10-04 20:54:23,941 | INFO     | preparing for final server update for job 6829514580 in state='finished'
[2025-10-04 21:55:02] 2025-10-04 20:54:24,405 | INFO     | time since job start (5737s) is within the limit (172800.0s)
[2025-10-04 21:55:02] 2025-10-04 20:54:24,492 | WARNING  | process 85629 can no longer be monitored (due to stat problems) - aborting
[2025-10-04 21:55:02] 2025-10-04 20:54:24,493 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6829514580/memory_monitor_summary.json (trf name=prmon)
[2025-10-04 21:55:02] 2025-10-04 20:54:24,582 | INFO     | number of running child processes to parent process 85629: 1
[2025-10-04 21:55:02] 2025-10-04 20:54:24,582 | INFO     | maximum number of monitored processes: 6
[2025-10-04 21:55:02] 2025-10-04 20:54:24,821 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-04 21:55:02] 2025-10-04 20:54:24,821 | INFO     | this job has now completed (state=finished)
[2025-10-04 21:55:02] 2025-10-04 20:54:24,821 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-04 21:55:02] 2025-10-04 20:54:24,821 | INFO     | log transfer has been attempted: DONE
[2025-10-04 21:55:02] 2025-10-04 20:54:24,821 | INFO     | job 6829514580 has finished - writing final server update
[2025-10-04 21:55:02] 2025-10-04 20:54:24,822 | INFO     | total number of processed events: 400 (read)
[2025-10-04 21:55:02] 2025-10-04 20:54:24,822 | INFO     | executing command: lscpu
[2025-10-04 21:55:02] 2025-10-04 20:54:24,849 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-04 21:55:02] 2025-10-04 20:54:25,512 | INFO     | PID=78807 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-04 21:55:02] 2025-10-04 20:54:25,512 | INFO     | .. there are 8 such processes running
[2025-10-04 21:55:02] 2025-10-04 20:54:26,512 | INFO     | time since job start (5739s) is within the limit (172800.0s)
[2025-10-04 21:55:02] 2025-10-04 20:54:27,084 | INFO     | monitor loop #433: job 0:6829514580 is in state 'finished'
[2025-10-04 21:55:02] 2025-10-04 20:54:27,085 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-04 21:55:02] 2025-10-04 20:54:28,189 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-04 21:55:02] 2025-10-04 20:54:28,193 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3327.35696875
[2025-10-04 21:55:02] 2025-10-04 20:54:28,197 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6829514580/memory_monitor_summary.json (trf name=prmon)
[2025-10-04 21:55:02] 2025-10-04 20:54:28,198 | INFO     | extracted standard info from prmon json
[2025-10-04 21:55:02] 2025-10-04 20:54:28,198 | INFO     | extracted standard memory fields from prmon json
[2025-10-04 21:55:02] 2025-10-04 20:54:28,198 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-04 21:55:02] 2025-10-04 20:54:28,198 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-04 21:55:02] 2025-10-04 20:54:28,198 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-04 21:55:02] 2025-10-04 20:54:28,200 | INFO     | fitting pss+swap vs Time
[2025-10-04 21:55:02] 2025-10-04 20:54:28,200 | INFO     | sum of square deviations: 204163828.0
[2025-10-04 21:55:02] 2025-10-04 20:54:28,200 | INFO     | sum of deviations: -10276355606.0
[2025-10-04 21:55:02] 2025-10-04 20:54:28,200 | INFO     | mean x: 1759608478.0
[2025-10-04 21:55:02] 2025-10-04 20:54:28,200 | INFO     | mean y: 2373714.988505747
[2025-10-04 21:55:02] 2025-10-04 20:54:28,200 | INFO     | -- intersect: 88570278345.28584
[2025-10-04 21:55:02] 2025-10-04 20:54:28,200 | INFO     | intersect: 88570278345.28584
[2025-10-04 21:55:02] 2025-10-04 20:54:28,200 | INFO     | chi2: 0.05275173372160011
[2025-10-04 21:55:02] 2025-10-04 20:54:28,201 | INFO     | -- intersect: 88570278345.28584
[2025-10-04 21:55:02] 2025-10-04 20:54:28,201 | INFO     | current memory leak: -50.33 B/s (using 87 data points, chi2=0.05)
[2025-10-04 21:55:02] 2025-10-04 20:54:28,201 | INFO     | could have reported an average CPU frequency of 3327 MHz (7 samples)
[2025-10-04 21:55:02] 2025-10-04 20:54:28,201 | INFO     | ..............................
[2025-10-04 21:55:02] 2025-10-04 20:54:28,201 | INFO     | . Timing measurements:
[2025-10-04 21:55:02] 2025-10-04 20:54:28,201 | INFO     | . get job = 0 s
[2025-10-04 21:55:02] 2025-10-04 20:54:28,201 | INFO     | . initial setup = 1 s
[2025-10-04 21:55:02] 2025-10-04 20:54:28,201 | INFO     | . payload setup = 4 s
[2025-10-04 21:55:02] 2025-10-04 20:54:28,201 | INFO     | . stage-in = 0 s
[2025-10-04 21:55:02] 2025-10-04 20:54:28,201 | INFO     | . payload execution = 5708 s
[2025-10-04 21:55:02] 2025-10-04 20:54:28,201 | INFO     | . stage-out = 0 s
[2025-10-04 21:55:02] 2025-10-04 20:54:28,201 | INFO     | . log creation = 0 s
[2025-10-04 21:55:02] 2025-10-04 20:54:28,201 | INFO     | ..............................
[2025-10-04 21:55:02] 2025-10-04 20:54:28,452 | INFO     | 
[2025-10-04 21:55:02] 2025-10-04 20:54:28,452 | INFO     | job summary report
[2025-10-04 21:55:02] 2025-10-04 20:54:28,452 | INFO     | --------------------------------------------------
[2025-10-04 21:55:02] 2025-10-04 20:54:28,452 | INFO     | PanDA job id: 6829514580
[2025-10-04 21:55:02] 2025-10-04 20:54:28,452 | INFO     | task id: 46376905
[2025-10-04 21:55:02] 2025-10-04 20:54:28,452 | INFO     | errors: (none)
[2025-10-04 21:55:02] 2025-10-04 20:54:28,452 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-04 21:55:02] 2025-10-04 20:54:28,452 | INFO     | pilot state: finished 
[2025-10-04 21:55:02] 2025-10-04 20:54:28,452 | INFO     | transexitcode: 0
[2025-10-04 21:55:02] 2025-10-04 20:54:28,452 | INFO     | exeerrorcode: 0
[2025-10-04 21:55:02] 2025-10-04 20:54:28,452 | INFO     | exeerrordiag: 
[2025-10-04 21:55:02] 2025-10-04 20:54:28,452 | INFO     | exitcode: 0
[2025-10-04 21:55:02] 2025-10-04 20:54:28,452 | INFO     | exitmsg: OK
[2025-10-04 21:55:02] 2025-10-04 20:54:28,452 | INFO     | cpuconsumptiontime: 21649 s
[2025-10-04 21:55:02] 2025-10-04 20:54:28,452 | INFO     | nevents: 400
[2025-10-04 21:55:02] 2025-10-04 20:54:28,453 | INFO     | neventsw: 0
[2025-10-04 21:55:02] 2025-10-04 20:54:28,453 | INFO     | pid: 85629
[2025-10-04 21:55:02] 2025-10-04 20:54:28,453 | INFO     | pgrp: 85629
[2025-10-04 21:55:02] 2025-10-04 20:54:28,453 | INFO     | corecount: 4
[2025-10-04 21:55:02] 2025-10-04 20:54:28,453 | INFO     | event service: False
[2025-10-04 21:55:02] 2025-10-04 20:54:28,453 | INFO     | sizes: {0: 2348652, 1: 2348851, 3: 2349113, 11: 2349141, 5717: 2375954, 5718: 2384966, 5720: 2385150, 5727: 2385344}
[2025-10-04 21:55:02] 2025-10-04 20:54:28,453 | INFO     | --------------------------------------------------
[2025-10-04 21:55:02] 2025-10-04 20:54:28,453 | INFO     | 
[2025-10-04 21:55:02] 2025-10-04 20:54:28,453 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-10-04 21:55:02] 2025-10-04 20:54:28,468 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-04 21:55:02] 2025-10-04 20:54:28,468 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-04 21:55:02] 2025-10-04 20:54:28,468 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-04 21:55:02] 2025-10-04 20:54:28,468 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-04 21:55:02] 2025-10-04 20:54:28,468 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-04 21:55:02] 2025-10-04 20:54:28,468 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-04 21:55:02] 2025-10-04 20:54:28,468 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-04 21:55:02] 2025-10-04 20:54:28,468 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-04 21:55:02] 2025-10-04 20:54:28,468 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-04 21:55:02] 2025-10-04 20:54:28,468 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-04 21:55:02] 2025-10-04 20:54:28,468 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-04 21:55:02] 2025-10-04 20:54:28,468 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-04 21:55:02] 2025-10-04 20:54:28,468 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-04 21:55:02] 2025-10-04 20:54:28,469 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-04 21:55:02] 2025-10-04 20:54:28,469 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-04 21:55:02] 2025-10-04 20:54:28,469 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-04 21:55:02] 2025-10-04 20:54:28,469 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-04 21:55:02] 2025-10-04 20:54:28,469 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-04 21:55:02] 2025-10-04 20:54:28,469 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-04 21:55:02] 2025-10-04 20:54:28,469 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-04 21:55:02] 2025-10-04 20:54:28,469 | INFO     | job 6829514580 has completed (purged errors)
[2025-10-04 21:55:02] 2025-10-04 20:54:28,469 | INFO     | overall cleanup function is called
[2025-10-04 21:55:02] 2025-10-04 20:54:29,477 | INFO     | --- collectZombieJob: --- 10, [85629]
[2025-10-04 21:55:02] 2025-10-04 20:54:29,477 | INFO     | zombie collector waiting for pid 85629
[2025-10-04 21:55:02] 2025-10-04 20:54:29,477 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-04 21:55:02] 2025-10-04 20:54:29,477 | INFO     | collected zombie processes
[2025-10-04 21:55:02] 2025-10-04 20:54:29,477 | INFO     | will attempt to kill all subprocesses of pid=85629
[2025-10-04 21:55:02] 2025-10-04 20:54:29,575 | INFO     | process IDs to be killed: [85629] (in reverse order)
[2025-10-04 21:55:02] 2025-10-04 20:54:29,633 | WARNING  | found no corresponding commands to process id(s)
[2025-10-04 21:55:02] 2025-10-04 20:54:29,633 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-04 21:55:02] 2025-10-04 20:54:29,637 | INFO     | did not find any defunct processes belonging to 85629
[2025-10-04 21:55:02] 2025-10-04 20:54:29,641 | INFO     | did not find any defunct processes belonging to 85629
[2025-10-04 21:55:02] 2025-10-04 20:54:29,641 | INFO     | ready for new job
[2025-10-04 21:55:02] 2025-10-04 20:54:29,641 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-04 21:55:02] 2025-10-04 20:54:29,643 | INFO     | ***************************************
[2025-10-04 21:55:02] 2025-10-04 20:54:29,643 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-04 21:55:02] 2025-10-04 20:54:29,643 | INFO     | ***************************************
[2025-10-04 21:55:02] 2025-10-04 20:54:29,643 | INFO     | 
[2025-10-04 21:55:02] 2025-10-04 20:54:29,645 | INFO     | architecture information:
[2025-10-04 21:55:02] 2025-10-04 20:54:29,645 | INFO     | executing command: cat /etc/os-release
[2025-10-04 21:55:02] 2025-10-04 20:54:29,658 | INFO     | cat /etc/os-release:
[2025-10-04 21:55:02] NAME="CentOS Linux"
[2025-10-04 21:55:02] VERSION="7 (Core)"
[2025-10-04 21:55:02] ID="centos"
[2025-10-04 21:55:02] ID_LIKE="rhel fedora"
[2025-10-04 21:55:02] VERSION_ID="7"
[2025-10-04 21:55:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-04 21:55:02] ANSI_COLOR="0;31"
[2025-10-04 21:55:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-04 21:55:02] HOME_URL="https://www.centos.org/"
[2025-10-04 21:55:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-04 21:55:02] 
[2025-10-04 21:55:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-04 21:55:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-04 21:55:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-04 21:55:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-04 21:55:02] 
[2025-10-04 21:55:02] 2025-10-04 20:54:29,658 | INFO     | ***************************************
[2025-10-04 21:55:02] 2025-10-04 20:54:30,161 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-10-04 21:55:02] 2025-10-04 20:54:30,174 | INFO     | sufficient remaining disk space (234659774464 B)
[2025-10-04 21:55:02] 2025-10-04 20:54:30,174 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-04 21:55:02] 2025-10-04 20:54:30,174 | INFO     | current server update state: UPDATING_FINAL
[2025-10-04 21:55:02] 2025-10-04 20:54:30,174 | INFO     | update_server=False
[2025-10-04 21:55:02] 2025-10-04 20:54:30,174 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-04 21:55:02] 2025-10-04 20:54:30,174 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-04 21:55:02] 2025-10-04 20:54:30,175 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-04 21:55:02] 2025-10-04 20:54:30,480 | INFO     | all data control threads have been joined
[2025-10-04 21:55:02] 2025-10-04 20:54:30,592 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-04 21:55:02] 2025-10-04 20:54:30,593 | INFO     | aborting loop
[2025-10-04 21:55:02] 2025-10-04 20:54:30,716 | INFO     | all payload control threads have been joined
[2025-10-04 21:55:02] 2025-10-04 20:54:31,177 | INFO     | [job] retrieve thread has finished
[2025-10-04 21:55:02] 2025-10-04 20:54:31,177 | INFO     | [job] queue monitor thread has finished
[2025-10-04 21:55:02] 2025-10-04 20:54:31,182 | INFO     | [job] create_data_payload thread has finished
[2025-10-04 21:55:02] 2025-10-04 20:54:31,241 | INFO     | [payload] validate_pre thread has finished
[2025-10-04 21:55:02] 2025-10-04 20:54:31,474 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-04 21:55:02] 2025-10-04 20:54:31,484 | INFO     | [data] control thread has finished
[2025-10-04 21:55:02] 2025-10-04 20:54:31,568 | INFO     | all job control threads have been joined
[2025-10-04 21:55:02] 2025-10-04 20:54:31,598 | INFO     | [job] job monitor thread has finished
[2025-10-04 21:55:02] 2025-10-04 20:54:31,720 | INFO     | [payload] control thread has finished
[2025-10-04 21:55:02] 2025-10-04 20:54:31,866 | INFO     | [payload] validate_post thread has finished
[2025-10-04 21:55:02] 2025-10-04 20:54:32,064 | INFO     | [payload] failed_post thread has finished
[2025-10-04 21:55:02] 2025-10-04 20:54:32,180 | INFO     | [data] copytool_out thread has finished
[2025-10-04 21:55:02] 2025-10-04 20:54:32,506 | INFO     | [payload] execute_payloads thread has finished
[2025-10-04 21:55:02] 2025-10-04 20:54:32,573 | INFO     | [job] control thread has finished
[2025-10-04 21:55:02] 2025-10-04 20:54:32,588 | INFO     | [job] validate thread has finished
[2025-10-04 21:55:02] 2025-10-04 20:54:32,656 | INFO     | [data] copytool_in thread has finished
[2025-10-04 21:55:02] 2025-10-04 20:54:35,480 | INFO     | [data] queue_monitor thread has finished
[2025-10-04 21:55:02] 2025-10-04 20:54:40,676 | INFO     | job.realtimelogging is not enabled
[2025-10-04 21:55:02] 2025-10-04 20:54:41,682 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-04 21:55:02] 2025-10-04 20:54:56,008 | INFO     | [monitor] cgroup control has ended
[2025-10-04 21:55:02] 2025-10-04 20:54:57,388 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138696773490496)>', '<ExcThread(monitor, started 138696454018816)>']
[2025-10-04 21:55:02] 2025-10-04 20:54:59,700 | INFO     | PID=78807 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-04 21:55:02] 2025-10-04 20:54:59,700 | INFO     | .. there are 8 such processes running
[2025-10-04 21:55:02] 2025-10-04 20:54:59,700 | INFO     | found 0 job(s) in 20 queues
[2025-10-04 21:55:02] 2025-10-04 20:54:59,700 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-04 21:55:02] 2025-10-04 20:54:59,700 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-04 21:55:02] 2025-10-04 20:54:59,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-04 21:55:02] 2025-10-04 20:54:59,701 | INFO     | [monitor] control thread has ended
[2025-10-04 21:55:02] 2025-10-04 20:55:02,413 | INFO     | all workflow threads have been joined
[2025-10-04 21:55:02] 2025-10-04 20:55:02,413 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-04 21:55:02] 2025-10-04 20:55:02,413 | INFO     | traces error code: 0
[2025-10-04 21:55:02] 2025-10-04 20:55:02,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-04 21:55:02] 2025-10-04 20:55:02,490 [wrapper] ==== pilot stdout END ====
[2025-10-04 21:55:02] 2025-10-04 20:55:02,492 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-04 21:55:02] 2025-10-04 20:55:02,494 [wrapper] pilotpid: 78807
[2025-10-04 21:55:02] 2025-10-04 20:55:02,496 [wrapper] Pilot exit status: 0
[2025-10-04 21:55:02] 2025-10-04 20:55:02,502 [wrapper] pandaids: 6829514580
[2025-10-04 21:55:02] 2025-10-04 20:55:02,535 [wrapper] cleanup supervisor_pilot  295223 78808
[2025-10-04 21:55:02] 2025-10-04 20:55:02,538 [wrapper] Test setup, not cleaning
[2025-10-04 21:55:02] 2025-10-04 20:55:02,539 [wrapper] apfmon messages muted
[2025-10-04 21:55:02] 2025-10-04 20:55:02,541 [wrapper] ==== wrapper stdout END ====
[2025-10-04 21:55:02] 2025-10-04 20:55:02,544 [wrapper] ==== wrapper stderr END ====
[2025-10-04 21:55:02]  *** Error codes and diagnostics ***
[2025-10-04 21:55:02]     "exeErrorCode": 0,
[2025-10-04 21:55:02]     "exeErrorDiag": "",
[2025-10-04 21:55:02]     "pilotErrorCode": 0,
[2025-10-04 21:55:02]     "pilotErrorDiag": "",
[2025-10-04 21:55:02]  *** Listing of results directory ***
[2025-10-04 21:55:02] total 389740
[2025-10-04 21:55:02] -rw-r--r-- 1 boinc boinc    552446 Oct  4 11:28 pilot3.tar.gz
[2025-10-04 21:55:02] -rwx------ 1 boinc boinc     36292 Oct  4 11:42 runpilot2-wrapper.sh
[2025-10-04 21:55:02] -rw-r--r-- 1 boinc boinc      5112 Oct  4 11:42 queuedata.json
[2025-10-04 21:55:02] -rw-r--r-- 1 boinc boinc       100 Oct  4 20:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-04 21:55:02] -rwxr-xr-x 1 boinc boinc      7986 Oct  4 20:18 run_atlas
[2025-10-04 21:55:02] -rw-r--r-- 1 boinc boinc       105 Oct  4 20:18 job.xml
[2025-10-04 21:55:02] -rw-r--r-- 1 boinc boinc      6777 Oct  4 20:18 init_data.xml
[2025-10-04 21:55:02] -rw-r--r-- 2 boinc boinc 213729824 Oct  4 20:18 EVNT.46376901._002064.pool.root.1
[2025-10-04 21:55:02] -rw-r--r-- 2 boinc boinc     15120 Oct  4 20:18 start_atlas.sh
[2025-10-04 21:55:02] drwxrwx--x 1 boinc boinc        76 Oct  4 20:18 shared
[2025-10-04 21:55:02] -rw-r--r-- 2 boinc boinc    565598 Oct  4 20:18 input.tar.gz
[2025-10-04 21:55:02] -rw-r--r-- 1 boinc boinc         0 Oct  4 20:18 boinc_lockfile
[2025-10-04 21:55:02] -rw-r--r-- 1 boinc boinc      2519 Oct  4 20:18 pandaJob.out
[2025-10-04 21:55:02] -rw------- 1 boinc boinc    974006 Oct  4 20:18 agis_schedconf.cvmfs.json
[2025-10-04 21:55:02] -rw------- 1 boinc boinc   1560401 Oct  4 20:18 agis_ddmendpoints.agis.ALL.json
[2025-10-04 21:55:02] drwx------ 1 boinc boinc       368 Oct  4 20:18 pilot3
[2025-10-04 21:55:02] -rw------- 1 boinc boinc 179239993 Oct  4 21:53 HITS.46376905._057592.pool.root.1
[2025-10-04 21:55:02] -rw-r--r-- 1 boinc boinc       529 Oct  4 21:53 boinc_task_state.xml
[2025-10-04 21:55:02] -rw------- 1 boinc boinc      1039 Oct  4 21:54 memory_monitor_summary.json
[2025-10-04 21:55:02] -rw------- 1 boinc boinc    283200 Oct  4 21:54 log.46376905._057592.job.log.tgz.1
[2025-10-04 21:55:02] -rw------- 1 boinc boinc      7791 Oct  4 21:54 heartbeat.json
[2025-10-04 21:55:02] -rw------- 1 boinc boinc        95 Oct  4 21:54 pilot_heartbeat.json
[2025-10-04 21:55:02] -rw-r--r-- 1 boinc boinc        27 Oct  4 21:55 wrapper_checkpoint.txt
[2025-10-04 21:55:02] -rw-r--r-- 1 boinc boinc      8192 Oct  4 21:55 boinc_mmap_file
[2025-10-04 21:55:02] -rw------- 1 boinc boinc      4901 Oct  4 21:55 pilotlog.txt
[2025-10-04 21:55:02] -rw------- 1 boinc boinc    845884 Oct  4 21:55 log.46376905._057592.job.log.1
[2025-10-04 21:55:02] -rw------- 1 boinc boinc       357 Oct  4 21:55 output.list
[2025-10-04 21:55:02] -rw-r--r-- 1 boinc boinc       620 Oct  4 21:55 runtime_log
[2025-10-04 21:55:02] -rw------- 1 boinc boinc   1146880 Oct  4 21:55 result.tar.gz
[2025-10-04 21:55:02] -rw-r--r-- 1 boinc boinc      8777 Oct  4 21:55 runtime_log.err
[2025-10-04 21:55:02] -rw------- 1 boinc boinc       650 Oct  4 21:55 RlQMDmktEP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmFKDMDmZFIqvn.diag
[2025-10-04 21:55:02] -rw-r--r-- 1 boinc boinc     22439 Oct  4 21:55 stderr.txt
[2025-10-04 21:55:02] HITS file was successfully produced:
[2025-10-04 21:55:02] -rw------- 1 boinc boinc 179239993 Oct  4 21:53 shared/HITS.pool.root.1
[2025-10-04 21:55:02]  *** Contents of shared directory: ***
[2025-10-04 21:55:02] total 385456
[2025-10-04 21:55:02] -rw-r--r-- 2 boinc boinc 213729824 Oct  4 20:18 ATLAS.root_0
[2025-10-04 21:55:02] -rw-r--r-- 2 boinc boinc     15120 Oct  4 20:18 start_atlas.sh
[2025-10-04 21:55:02] -rw-r--r-- 2 boinc boinc    565598 Oct  4 20:18 input.tar.gz
[2025-10-04 21:55:02] -rw------- 1 boinc boinc 179239993 Oct  4 21:53 HITS.pool.root.1
[2025-10-04 21:55:02] -rw------- 1 boinc boinc   1146880 Oct  4 21:55 result.tar.gz
21:55:04 (74988): run_atlas exited; CPU time 21707.055311
21:55:04 (74988): called boinc_finish(0)

</stderr_txt>
]]>

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