Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:45:38 (8457): wrapper (7.7.26015): starting
12:45:38 (8457): wrapper: running run_atlas (--nthreads 8)
[2025-10-06 12:45:38] Arguments: --nthreads 8
[2025-10-06 12:45:38] Threads: 8
[2025-10-06 12:45:38] Checking for CVMFS
[2025-10-06 12:45:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 12:45:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 12:45:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 12:45:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 12:45:40] 2.11.2.0 6199 211862 137368 151395 3 61 16870341 25165825 4632 130560 0 151517333 99.912 63397241 3147 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-06 12:45:40] CVMFS is ok
[2025-10-06 12:45:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 12:45:40] Checking for apptainer binary...
[2025-10-06 12:45:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 12:45:40] Running /usr/bin/apptainer --version
[2025-10-06 12:45:40] apptainer version 1.3.2-1.el7
[2025-10-06 12:45:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 12:45:59] cg-vwn228.simple-grid.lan
[2025-10-06 12:45:59] apptainer works
[2025-10-06 12:45:59] Set ATHENA_PROC_NUMBER=8
[2025-10-06 12:45:59] Set ATHENA_CORE_NUMBER=8
[2025-10-06 12:45:59] Starting ATLAS job with PandaID=6829230356
[2025-10-06 12:45:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 16:49:09]  *** The last 200 lines of the pilot log: ***
[2025-10-06 16:49:09] 2025-10-06 14:47:57,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 16:49:09] 2025-10-06 14:47:57,083 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 16:49:09] 2025-10-06 14:47:57,089 | INFO     | fitting pss+swap vs Time
[2025-10-06 16:49:09] 2025-10-06 14:47:57,089 | INFO     | sum of square deviations: 3627000098.0
[2025-10-06 16:49:09] 2025-10-06 14:47:57,091 | INFO     | sum of deviations: 137831794515.00003
[2025-10-06 16:49:09] 2025-10-06 14:47:57,092 | INFO     | mean x: 1759755094.0
[2025-10-06 16:49:09] 2025-10-06 14:47:57,092 | INFO     | mean y: 2386088.515418502
[2025-10-06 16:49:09] 2025-10-06 14:47:57,092 | INFO     | -- intersect: -66871117070.935715
[2025-10-06 16:49:09] 2025-10-06 14:47:57,092 | INFO     | intersect: -66871117070.935715
[2025-10-06 16:49:09] 2025-10-06 14:47:57,092 | INFO     | chi2: 8.545709650283104
[2025-10-06 16:49:09] 2025-10-06 14:47:57,093 | INFO     | sum of square deviations: 3392567795.5
[2025-10-06 16:49:09] 2025-10-06 14:47:57,094 | INFO     | sum of deviations: 149079578567.5
[2025-10-06 16:49:09] 2025-10-06 14:47:57,094 | INFO     | mean x: 1759754941.5
[2025-10-06 16:49:09] 2025-10-06 14:47:57,094 | INFO     | mean y: 2393232.382882883
[2025-10-06 16:49:09] 2025-10-06 14:47:57,094 | INFO     | -- intersect: -77326503601.713
[2025-10-06 16:49:09] 2025-10-06 14:47:57,095 | INFO     | intersect: -77326503601.713
[2025-10-06 16:49:09] 2025-10-06 14:47:57,095 | INFO     | chi2: 7.844550757325729
[2025-10-06 16:49:09] 2025-10-06 14:47:57,095 | INFO     | current chi2=7.844550757325729 (change=8.204805939482709 %)
[2025-10-06 16:49:09] 2025-10-06 14:47:57,095 | INFO     | right removable region: 221
[2025-10-06 16:49:09] 2025-10-06 14:47:57,095 | INFO     | sum of square deviations: 3392567795.5
[2025-10-06 16:49:09] 2025-10-06 14:47:57,097 | INFO     | sum of deviations: 60428278262.5
[2025-10-06 16:49:09] 2025-10-06 14:47:57,097 | INFO     | mean x: 1759755246.5
[2025-10-06 16:49:09] 2025-10-06 14:47:57,097 | INFO     | mean y: 2436406.373873874
[2025-10-06 16:49:09] 2025-10-06 14:47:57,097 | INFO     | -- intersect: -31342251782.45094
[2025-10-06 16:49:09] 2025-10-06 14:47:57,098 | INFO     | intersect: -31342251782.45094
[2025-10-06 16:49:09] 2025-10-06 14:47:57,098 | INFO     | chi2: 3.5299515515830078
[2025-10-06 16:49:09] 2025-10-06 14:47:57,098 | INFO     | current chi2=3.5299515515830078 (change=58.69328942779999 %)
[2025-10-06 16:49:09] 2025-10-06 14:47:57,099 | INFO     | sum of square deviations: 3168461268.0
[2025-10-06 16:49:09] 2025-10-06 14:47:57,100 | INFO     | sum of deviations: 2391821468.000002
[2025-10-06 16:49:09] 2025-10-06 14:47:57,100 | INFO     | mean x: 1759755399.0
[2025-10-06 16:49:09] 2025-10-06 14:47:57,101 | INFO     | mean y: 2475841.1428571427
[2025-10-06 16:49:09] 2025-10-06 14:47:57,101 | INFO     | -- intersect: -1325935771.227564
[2025-10-06 16:49:09] 2025-10-06 14:47:57,101 | INFO     | intersect: -1325935771.227564
[2025-10-06 16:49:09] 2025-10-06 14:47:57,101 | INFO     | chi2: 0.9398022292383384
[2025-10-06 16:49:09] 2025-10-06 14:47:57,101 | INFO     | current chi2=0.9398022292383384 (change=73.37634198359227 %)
[2025-10-06 16:49:09] 2025-10-06 14:47:57,102 | INFO     | sum of square deviations: 2954447953.0
[2025-10-06 16:49:09] 2025-10-06 14:47:57,104 | INFO     | sum of deviations: -10249050481.0
[2025-10-06 16:49:09] 2025-10-06 14:47:57,104 | INFO     | mean x: 1759755551.5
[2025-10-06 16:49:09] 2025-10-06 14:47:57,104 | INFO     | mean y: 2484798.216981132
[2025-10-06 16:49:09] 2025-10-06 14:47:57,104 | INFO     | -- intersect: 6107118817.316757
[2025-10-06 16:49:09] 2025-10-06 14:47:57,104 | INFO     | intersect: 6107118817.316757
[2025-10-06 16:49:09] 2025-10-06 14:47:57,105 | INFO     | chi2: 0.7957730629702674
[2025-10-06 16:49:09] 2025-10-06 14:47:57,105 | INFO     | current chi2=0.7957730629702674 (change=15.325476125418355 %)
[2025-10-06 16:49:09] 2025-10-06 14:47:57,105 | INFO     | left removable region: 30
[2025-10-06 16:49:09] 2025-10-06 14:47:57,105 | INFO     | sum of square deviations: 2160561440.0
[2025-10-06 16:49:09] 2025-10-06 14:47:57,107 | INFO     | sum of deviations: 4112136941.000001
[2025-10-06 16:49:09] 2025-10-06 14:47:57,107 | INFO     | mean x: 1759755826.0
[2025-10-06 16:49:09] 2025-10-06 14:47:57,107 | INFO     | mean y: 2494317.6125654452
[2025-10-06 16:49:09] 2025-10-06 14:47:57,107 | INFO     | -- intersect: -3346800363.5118785
[2025-10-06 16:49:09] 2025-10-06 14:47:57,107 | INFO     | intersect: -3346800363.5118785
[2025-10-06 16:49:09] 2025-10-06 14:47:57,108 | INFO     | chi2: 0.000324315172742792
[2025-10-06 16:49:09] 2025-10-06 14:47:57,108 | INFO     | -- intersect: -3346800363.5118785
[2025-10-06 16:49:09] 2025-10-06 14:47:57,108 | INFO     | current memory leak: 1.90 B/s (using 191 data points, chi2=0.00)
[2025-10-06 16:49:09] 2025-10-06 14:47:57,109 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-06 16:49:09] 2025-10-06 14:47:57,109 | INFO     | ..............................
[2025-10-06 16:49:09] 2025-10-06 14:47:57,109 | INFO     | . Timing measurements:
[2025-10-06 16:49:09] 2025-10-06 14:47:57,109 | INFO     | . get job = 0 s
[2025-10-06 16:49:09] 2025-10-06 14:47:57,109 | INFO     | . initial setup = 7 s
[2025-10-06 16:49:09] 2025-10-06 14:47:57,109 | INFO     | . payload setup = 116 s
[2025-10-06 16:49:09] 2025-10-06 14:47:57,109 | INFO     | . stage-in = 0 s
[2025-10-06 16:49:09] 2025-10-06 14:47:57,110 | INFO     | . payload execution = 13945 s
[2025-10-06 16:49:09] 2025-10-06 14:47:57,110 | INFO     | . stage-out = 2 s
[2025-10-06 16:49:09] 2025-10-06 14:47:57,110 | INFO     | . log creation = 0 s
[2025-10-06 16:49:09] 2025-10-06 14:47:57,110 | INFO     | ..............................
[2025-10-06 16:49:09] 2025-10-06 14:47:57,734 | INFO     | 
[2025-10-06 16:49:09] 2025-10-06 14:47:57,735 | INFO     | job summary report
[2025-10-06 16:49:09] 2025-10-06 14:47:57,735 | INFO     | --------------------------------------------------
[2025-10-06 16:49:09] 2025-10-06 14:47:57,735 | INFO     | PanDA job id: 6829230356
[2025-10-06 16:49:09] 2025-10-06 14:47:57,735 | INFO     | task id: 46376905
[2025-10-06 16:49:09] 2025-10-06 14:47:57,735 | INFO     | errors: (none)
[2025-10-06 16:49:09] 2025-10-06 14:47:57,735 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 16:49:09] 2025-10-06 14:47:57,735 | INFO     | pilot state: finished 
[2025-10-06 16:49:09] 2025-10-06 14:47:57,735 | INFO     | transexitcode: 0
[2025-10-06 16:49:09] 2025-10-06 14:47:57,735 | INFO     | exeerrorcode: 0
[2025-10-06 16:49:09] 2025-10-06 14:47:57,736 | INFO     | exeerrordiag: 
[2025-10-06 16:49:09] 2025-10-06 14:47:57,736 | INFO     | exitcode: 0
[2025-10-06 16:49:09] 2025-10-06 14:47:57,736 | INFO     | exitmsg: OK
[2025-10-06 16:49:09] 2025-10-06 14:47:57,736 | INFO     | cpuconsumptiontime: 49796 s
[2025-10-06 16:49:09] 2025-10-06 14:47:57,736 | INFO     | nevents: 400
[2025-10-06 16:49:09] 2025-10-06 14:47:57,736 | INFO     | neventsw: 0
[2025-10-06 16:49:09] 2025-10-06 14:47:57,736 | INFO     | pid: 19093
[2025-10-06 16:49:09] 2025-10-06 14:47:57,736 | INFO     | pgrp: 19093
[2025-10-06 16:49:09] 2025-10-06 14:47:57,736 | INFO     | corecount: 8
[2025-10-06 16:49:09] 2025-10-06 14:47:57,736 | INFO     | event service: False
[2025-10-06 16:49:09] 2025-10-06 14:47:57,737 | INFO     | sizes: {0: 2348646, 1: 2348845, 12: 2348845, 23: 2348873, 33: 2348901, 44: 2348957, 55: 2349113, 66: 2349141, 72: 2349431, 76: 2349459, 14066: 2379803, 14069: 2388
[2025-10-06 16:49:09] 2025-10-06 14:47:57,737 | INFO     | --------------------------------------------------
[2025-10-06 16:49:09] 2025-10-06 14:47:57,737 | INFO     | 
[2025-10-06 16:49:09] 2025-10-06 14:47:57,737 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-10-06 16:49:09] 2025-10-06 14:47:58,048 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 16:49:09] 2025-10-06 14:47:58,048 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 16:49:09] 2025-10-06 14:47:58,048 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 16:49:09] 2025-10-06 14:47:58,048 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 16:49:09] 2025-10-06 14:47:58,048 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 16:49:09] 2025-10-06 14:47:58,048 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 16:49:09] 2025-10-06 14:47:58,049 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 16:49:09] 2025-10-06 14:47:58,049 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 16:49:09] 2025-10-06 14:47:58,049 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 16:49:09] 2025-10-06 14:47:58,049 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 16:49:09] 2025-10-06 14:47:58,049 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 16:49:09] 2025-10-06 14:47:58,049 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 16:49:09] 2025-10-06 14:47:58,049 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 16:49:09] 2025-10-06 14:47:58,049 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 16:49:09] 2025-10-06 14:47:58,050 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 16:49:09] 2025-10-06 14:47:58,050 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 16:49:09] 2025-10-06 14:47:58,050 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 16:49:09] 2025-10-06 14:47:58,050 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 16:49:09] 2025-10-06 14:47:58,050 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 16:49:09] 2025-10-06 14:47:58,050 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 16:49:09] 2025-10-06 14:47:58,050 | INFO     | job 6829230356 has completed (purged errors)
[2025-10-06 16:49:09] 2025-10-06 14:47:58,051 | INFO     | overall cleanup function is called
[2025-10-06 16:49:09] 2025-10-06 14:47:59,062 | INFO     | --- collectZombieJob: --- 10, [19093]
[2025-10-06 16:49:09] 2025-10-06 14:47:59,062 | INFO     | zombie collector waiting for pid 19093
[2025-10-06 16:49:09] 2025-10-06 14:47:59,063 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 16:49:09] 2025-10-06 14:47:59,063 | INFO     | collected zombie processes
[2025-10-06 16:49:09] 2025-10-06 14:47:59,063 | INFO     | will attempt to kill all subprocesses of pid=19093
[2025-10-06 16:49:09] 2025-10-06 14:47:59,204 | INFO     | process IDs to be killed: [19093] (in reverse order)
[2025-10-06 16:49:09] 2025-10-06 14:48:00,169 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 16:49:09] 2025-10-06 14:48:00,170 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 16:49:09] 2025-10-06 14:48:00,173 | INFO     | did not find any defunct processes belonging to 19093
[2025-10-06 16:49:09] 2025-10-06 14:48:00,176 | INFO     | did not find any defunct processes belonging to 19093
[2025-10-06 16:49:09] 2025-10-06 14:48:00,176 | INFO     | ready for new job
[2025-10-06 16:49:09] 2025-10-06 14:48:00,177 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 16:49:09] 2025-10-06 14:48:00,179 | INFO     | ***************************************
[2025-10-06 16:49:09] 2025-10-06 14:48:00,179 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 16:49:09] 2025-10-06 14:48:00,179 | INFO     | ***************************************
[2025-10-06 16:49:09] 2025-10-06 14:48:00,179 | INFO     | 
[2025-10-06 16:49:09] 2025-10-06 14:48:00,180 | INFO     | pilot is running in a VM
[2025-10-06 16:49:09] 2025-10-06 14:48:00,180 | INFO     | architecture information:
[2025-10-06 16:49:09] 2025-10-06 14:48:00,190 | INFO     | executing command: cat /etc/os-release
[2025-10-06 16:49:09] 2025-10-06 14:48:00,522 | INFO     | cat /etc/os-release:
[2025-10-06 16:49:09] NAME="CentOS Linux"
[2025-10-06 16:49:09] VERSION="7 (Core)"
[2025-10-06 16:49:09] ID="centos"
[2025-10-06 16:49:09] ID_LIKE="rhel fedora"
[2025-10-06 16:49:09] VERSION_ID="7"
[2025-10-06 16:49:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 16:49:09] ANSI_COLOR="0;31"
[2025-10-06 16:49:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 16:49:09] HOME_URL="https://www.centos.org/"
[2025-10-06 16:49:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 16:49:09] 
[2025-10-06 16:49:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 16:49:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 16:49:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 16:49:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 16:49:09] 
[2025-10-06 16:49:09] 2025-10-06 14:48:00,522 | INFO     | ***************************************
[2025-10-06 16:49:09] 2025-10-06 14:48:01,025 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-10-06 16:49:09] 2025-10-06 14:48:01,307 | INFO     | sufficient remaining disk space (495611543552 B)
[2025-10-06 16:49:09] 2025-10-06 14:48:01,307 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 16:49:09] 2025-10-06 14:48:01,307 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 16:49:09] 2025-10-06 14:48:01,308 | INFO     | update_server=False
[2025-10-06 16:49:09] 2025-10-06 14:48:01,308 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 16:49:09] 2025-10-06 14:48:01,308 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 16:49:09] 2025-10-06 14:48:01,309 | INFO     | aborting loop
[2025-10-06 16:49:09] 2025-10-06 14:48:01,511 | INFO     | all job control threads have been joined
[2025-10-06 16:49:09] 2025-10-06 14:48:01,574 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 16:49:09] 2025-10-06 14:48:02,250 | INFO     | all data control threads have been joined
[2025-10-06 16:49:09] 2025-10-06 14:48:02,267 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 16:49:09] 2025-10-06 14:48:02,313 | INFO     | [job] retrieve thread has finished
[2025-10-06 16:49:09] 2025-10-06 14:48:02,314 | INFO     | [job] job monitor thread has finished
[2025-10-06 16:49:09] 2025-10-06 14:48:02,323 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 16:49:09] 2025-10-06 14:48:02,324 | INFO     | [payload] validate_post thread has finished
[2025-10-06 16:49:09] 2025-10-06 14:48:02,517 | INFO     | [job] control thread has finished
[2025-10-06 16:49:09] 2025-10-06 14:48:02,522 | INFO     | [data] copytool_in thread has finished
[2025-10-06 16:49:09] 2025-10-06 14:48:02,535 | INFO     | all payload control threads have been joined
[2025-10-06 16:49:09] 2025-10-06 14:48:03,157 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 16:49:09] 2025-10-06 14:48:03,255 | INFO     | [data] control thread has finished
[2025-10-06 16:49:09] 2025-10-06 14:48:03,272 | INFO     | [job] queue monitor thread has finished
[2025-10-06 16:49:09] 2025-10-06 14:48:03,277 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 16:49:09] 2025-10-06 14:48:03,395 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 16:49:09] 2025-10-06 14:48:03,449 | INFO     | [job] validate thread has finished
[2025-10-06 16:49:09] 2025-10-06 14:48:03,541 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 16:49:09] 2025-10-06 14:48:03,542 | INFO     | [payload] control thread has finished
[2025-10-06 16:49:09] 2025-10-06 14:48:03,581 | INFO     | [data] copytool_out thread has finished
[2025-10-06 16:49:09] 2025-10-06 14:48:03,754 | INFO     | [payload] failed_post thread has finished
[2025-10-06 16:49:09] 2025-10-06 14:48:07,167 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 16:49:09] 2025-10-06 14:48:29,747 | INFO     | PID=12233 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-06 16:49:09] 2025-10-06 14:48:29,747 | INFO     | .. there are 9 such processes running
[2025-10-06 16:49:09] 2025-10-06 14:48:29,748 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 16:49:09] 2025-10-06 14:48:29,748 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 16:49:09] 2025-10-06 14:48:29,748 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 16:49:09] 2025-10-06 14:48:59,616 | INFO     | [monitor] cgroup control has ended
[2025-10-06 16:49:09] 2025-10-06 14:49:00,623 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140137779185472)>', '<ExcThread(monitor, started 140137124062976)>']
[2025-10-06 16:49:09] 2025-10-06 14:49:00,935 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 16:49:09] 2025-10-06 14:49:00,935 | INFO     | [monitor] control thread has ended
[2025-10-06 16:49:09] 2025-10-06 14:49:05,649 | INFO     | all workflow threads have been joined
[2025-10-06 16:49:09] 2025-10-06 14:49:05,649 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 16:49:09] 2025-10-06 14:49:05,650 | INFO     | traces error code: 0
[2025-10-06 16:49:09] 2025-10-06 14:49:05,650 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 16:49:09] 2025-10-06 14:49:05,974 [wrapper] ==== pilot stdout END ====
[2025-10-06 16:49:09] 2025-10-06 14:49:06,065 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 16:49:09] 2025-10-06 14:49:06,148 [wrapper] pilotpid: 12233
[2025-10-06 16:49:09] 2025-10-06 14:49:06,168 [wrapper] Pilot exit status: 0
[2025-10-06 16:49:09] 2025-10-06 14:49:06,426 [wrapper] pandaids: 6829230356
[2025-10-06 16:49:09] 2025-10-06 14:49:06,948 [wrapper] cleanup supervisor_pilot  6652 12234
[2025-10-06 16:49:09] 2025-10-06 14:49:07,044 [wrapper] Test setup, not cleaning
[2025-10-06 16:49:09] 2025-10-06 14:49:07,066 [wrapper] apfmon messages muted
[2025-10-06 16:49:09] 2025-10-06 14:49:07,096 [wrapper] ==== wrapper stdout END ====
[2025-10-06 16:49:09] 2025-10-06 14:49:07,121 [wrapper] ==== wrapper stderr END ====
[2025-10-06 16:49:09]  *** Error codes and diagnostics ***
[2025-10-06 16:49:09]     "exeErrorCode": 0,
[2025-10-06 16:49:09]     "exeErrorDiag": "",
[2025-10-06 16:49:09]     "pilotErrorCode": 0,
[2025-10-06 16:49:09]     "pilotErrorDiag": "",
[2025-10-06 16:49:09]  *** Listing of results directory ***
[2025-10-06 16:49:09] total 393196
[2025-10-06 16:49:09] -rw-r--r--. 1 boinc boinc    552446 Oct  4 07:00 pilot3.tar.gz
[2025-10-06 16:49:09] -rwx------. 1 boinc boinc     36292 Oct  4 07:06 runpilot2-wrapper.sh
[2025-10-06 16:49:09] -rw-r--r--. 1 boinc boinc      5112 Oct  4 07:06 queuedata.json
[2025-10-06 16:49:09] -rw-r--r--. 1 boinc boinc       100 Oct  6 12:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 16:49:09] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 12:45 run_atlas
[2025-10-06 16:49:09] -rw-r--r--. 1 boinc boinc       105 Oct  6 12:45 job.xml
[2025-10-06 16:49:09] -rw-r--r--. 2 boinc boinc 212729361 Oct  6 12:45 EVNT.46376901._001888.pool.root.1
[2025-10-06 16:49:09] -rw-r--r--. 2 boinc boinc     15120 Oct  6 12:45 start_atlas.sh
[2025-10-06 16:49:09] drwxrwx--x. 2 boinc boinc        68 Oct  6 12:45 shared
[2025-10-06 16:49:09] -rw-r--r--. 2 boinc boinc    565600 Oct  6 12:45 input.tar.gz
[2025-10-06 16:49:09] -rw-r--r--. 1 boinc boinc         0 Oct  6 12:45 boinc_lockfile
[2025-10-06 16:49:09] -rw-r--r--. 1 boinc boinc      2519 Oct  6 12:45 pandaJob.out
[2025-10-06 16:49:09] -rw-------. 1 boinc boinc    975011 Oct  6 12:49 agis_schedconf.cvmfs.json
[2025-10-06 16:49:09] drwx------. 4 boinc boinc      4096 Oct  6 12:49 pilot3
[2025-10-06 16:49:09] -rw-r--r--. 1 boinc boinc      6396 Oct  6 13:49 init_data.xml
[2025-10-06 16:49:09] -rw-------. 1 boinc boinc 181278035 Oct  6 16:45 HITS.46376905._053126.pool.root.1
[2025-10-06 16:49:09] -rw-r--r--. 1 boinc boinc       531 Oct  6 16:45 boinc_task_state.xml
[2025-10-06 16:49:09] -rw-------. 1 boinc boinc      1018 Oct  6 16:46 memory_monitor_summary.json
[2025-10-06 16:49:09] -rw-------. 1 boinc boinc   1560401 Oct  6 16:46 agis_ddmendpoints.agis.ALL.json
[2025-10-06 16:49:09] -rw-------. 1 boinc boinc    462278 Oct  6 16:46 log.46376905._053126.job.log.tgz.1
[2025-10-06 16:49:09] -rw-------. 1 boinc boinc      7781 Oct  6 16:47 heartbeat.json
[2025-10-06 16:49:09] -rw-------. 1 boinc boinc        95 Oct  6 16:48 pilot_heartbeat.json
[2025-10-06 16:49:09] -rw-r--r--. 1 boinc boinc      8192 Oct  6 16:48 boinc_mmap_file
[2025-10-06 16:49:09] -rw-r--r--. 1 boinc boinc        28 Oct  6 16:48 wrapper_checkpoint.txt
[2025-10-06 16:49:09] -rw-------. 1 boinc boinc      4885 Oct  6 16:49 pilotlog.txt
[2025-10-06 16:49:09] -rw-------. 1 boinc boinc   1915945 Oct  6 16:49 log.46376905._053126.job.log.1
[2025-10-06 16:49:09] -rw-------. 1 boinc boinc       357 Oct  6 16:49 output.list
[2025-10-06 16:49:09] -rw-r--r--. 1 boinc boinc       620 Oct  6 16:49 runtime_log
[2025-10-06 16:49:09] -rw-------. 1 boinc boinc   2396160 Oct  6 16:49 result.tar.gz
[2025-10-06 16:49:09] -rw-r--r--. 1 boinc boinc      8717 Oct  6 16:49 runtime_log.err
[2025-10-06 16:49:09] -rw-------. 1 boinc boinc       657 Oct  6 16:49 JQpMDmne9O8n9Rq4apOajLDm4fhM0noT9bVof3QYDmKvCMDmrrrvQn.diag
[2025-10-06 16:49:09] -rw-r--r--. 1 boinc boinc     20606 Oct  6 16:49 stderr.txt
[2025-10-06 16:49:09] HITS file was successfully produced:
[2025-10-06 16:49:09] -rw-------. 1 boinc boinc 181278035 Oct  6 16:45 shared/HITS.pool.root.1
[2025-10-06 16:49:09]  *** Contents of shared directory: ***
[2025-10-06 16:49:09] total 387688
[2025-10-06 16:49:09] -rw-r--r--. 2 boinc boinc 212729361 Oct  6 12:45 ATLAS.root_0
[2025-10-06 16:49:09] -rw-r--r--. 2 boinc boinc     15120 Oct  6 12:45 start_atlas.sh
[2025-10-06 16:49:09] -rw-r--r--. 2 boinc boinc    565600 Oct  6 12:45 input.tar.gz
[2025-10-06 16:49:09] -rw-------. 1 boinc boinc 181278035 Oct  6 16:45 HITS.pool.root.1
[2025-10-06 16:49:09] -rw-------. 1 boinc boinc   2396160 Oct  6 16:49 result.tar.gz
16:49:11 (8457): run_atlas exited; CPU time 49996.081855
16:49:11 (8457): called boinc_finish(0)

</stderr_txt>
]]>

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