Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:21:21 (486799): wrapper (7.7.26015): starting
12:21:21 (486799): wrapper: running run_atlas (--nthreads 4)
[2025-10-05 12:21:21] Arguments: --nthreads 4
[2025-10-05 12:21:21] Threads: 4
[2025-10-05 12:21:21] Checking for CVMFS
[2025-10-05 12:21:21] No cvmfs_config command found, will try listing directly
[2025-10-05 12:21:21] CVMFS is ok
[2025-10-05 12:21:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-05 12:21:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-05 12:21:21] Further information can be found at the LHC@home message board.
[2025-10-05 12:21:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-05 12:21:21] Checking for apptainer binary...
[2025-10-05 12:21:21] which: no apptainer in ((null))
[2025-10-05 12:21:21] apptainer is not installed, using version from CVMFS
[2025-10-05 12:21:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-05 12:21:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-10-05 12:21:21] apptainer works
[2025-10-05 12:21:21] Set ATHENA_PROC_NUMBER=4
[2025-10-05 12:21:21] Set ATHENA_CORE_NUMBER=4
[2025-10-05 12:21:21] Starting ATLAS job with PandaID=6826518358
[2025-10-05 12:21:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:02:45 (1455441): wrapper (7.7.26015): starting
16:02:45 (1455441): wrapper: running run_atlas (--nthreads 4)
[2025-10-05 16:02:45] Arguments: --nthreads 4
[2025-10-05 16:02:45] Threads: 4
[2025-10-05 16:02:45] This job has been restarted, cleaning up previous attempt
[2025-10-05 16:02:45] Checking for CVMFS
[2025-10-05 16:02:45] No cvmfs_config command found, will try listing directly
[2025-10-05 16:02:45] CVMFS is ok
[2025-10-05 16:02:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-05 16:02:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-05 16:02:45] Further information can be found at the LHC@home message board.
[2025-10-05 16:02:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-05 16:02:45] Checking for apptainer binary...
[2025-10-05 16:02:45] which: no apptainer in ((null))
[2025-10-05 16:02:45] apptainer is not installed, using version from CVMFS
[2025-10-05 16:02:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-05 16:02:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-10-05 16:02:45] apptainer works
[2025-10-05 16:02:45] Set ATHENA_PROC_NUMBER=4
[2025-10-05 16:02:45] Set ATHENA_CORE_NUMBER=4
[2025-10-05 16:02:45] Starting ATLAS job with PandaID=6826518358
[2025-10-05 16:02:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-05 19:44:33]  *** The last 200 lines of the pilot log: ***
[2025-10-05 19:44:33] 2025-10-05 17:13:52,703 | INFO     | right removable region: 181
[2025-10-05 19:44:33] 2025-10-05 17:13:52,703 | INFO     | sum of square deviations: 1869302025.5
[2025-10-05 19:44:33] 2025-10-05 17:13:52,704 | INFO     | sum of deviations: 2653876461.5
[2025-10-05 19:44:33] 2025-10-05 17:13:52,704 | INFO     | mean x: 1759678838.5
[2025-10-05 19:44:33] 2025-10-05 17:13:52,704 | INFO     | mean y: 2324438.532967033
[2025-10-05 19:44:33] 2025-10-05 17:13:52,704 | INFO     | -- intersect: -2495918320.309435
[2025-10-05 19:44:33] 2025-10-05 17:13:52,705 | INFO     | intersect: -2495918320.309435
[2025-10-05 19:44:33] 2025-10-05 17:13:52,705 | INFO     | chi2: 0.009075932116499435
[2025-10-05 19:44:33] 2025-10-05 17:13:52,705 | INFO     | current chi2=0.009075932116499435 (change=99.24872147026741 %)
[2025-10-05 19:44:33] 2025-10-05 17:13:52,705 | INFO     | sum of square deviations: 1719429448.0
[2025-10-05 19:44:33] 2025-10-05 17:13:52,706 | INFO     | sum of deviations: 3926251275.0
[2025-10-05 19:44:33] 2025-10-05 17:13:52,706 | INFO     | mean x: 1759678991.0
[2025-10-05 19:44:33] 2025-10-05 17:13:52,706 | INFO     | mean y: 2323136.1016949154
[2025-10-05 19:44:33] 2025-10-05 17:13:52,707 | INFO     | -- intersect: -4015836428.421747
[2025-10-05 19:44:33] 2025-10-05 17:13:52,707 | INFO     | intersect: -4015836428.421747
[2025-10-05 19:44:33] 2025-10-05 17:13:52,707 | INFO     | chi2: 0.005453551237302617
[2025-10-05 19:44:33] 2025-10-05 17:13:52,707 | INFO     | current chi2=0.005453551237302617 (change=39.911943288024084 %)
[2025-10-05 19:44:33] 2025-10-05 17:13:52,707 | INFO     | sum of square deviations: 1577789583.0
[2025-10-05 19:44:33] 2025-10-05 17:13:52,708 | INFO     | sum of deviations: 4454748717.5
[2025-10-05 19:44:33] 2025-10-05 17:13:52,708 | INFO     | mean x: 1759679143.5
[2025-10-05 19:44:33] 2025-10-05 17:13:52,708 | INFO     | mean y: 2322593.63372093
[2025-10-05 19:44:33] 2025-10-05 17:13:52,708 | INFO     | -- intersect: -4965975138.953175
[2025-10-05 19:44:33] 2025-10-05 17:13:52,708 | INFO     | intersect: -4965975138.953175
[2025-10-05 19:44:33] 2025-10-05 17:13:52,709 | INFO     | chi2: 0.0002781957959298134
[2025-10-05 19:44:33] 2025-10-05 17:13:52,709 | INFO     | current chi2=0.0002781957959298134 (change=94.89881393197633 %)
[2025-10-05 19:44:33] 2025-10-05 17:13:52,709 | INFO     | sum of square deviations: 1444149868.0
[2025-10-05 19:44:33] 2025-10-05 17:13:52,710 | INFO     | sum of deviations: 3806234812.0000005
[2025-10-05 19:44:33] 2025-10-05 17:13:52,710 | INFO     | mean x: 1759679296.0
[2025-10-05 19:44:33] 2025-10-05 17:13:52,710 | INFO     | mean y: 2323332.2994011976
[2025-10-05 19:44:33] 2025-10-05 17:13:52,710 | INFO     | -- intersect: -4635528141.984605
[2025-10-05 19:44:33] 2025-10-05 17:13:52,710 | INFO     | intersect: -4635528141.984605
[2025-10-05 19:44:33] 2025-10-05 17:13:52,710 | INFO     | chi2: 0.00015410797086737852
[2025-10-05 19:44:33] 2025-10-05 17:13:52,711 | INFO     | current chi2=0.00015410797086737852 (change=44.60449326622508 %)
[2025-10-05 19:44:33] 2025-10-05 17:13:52,711 | INFO     | sum of square deviations: 1318277740.5
[2025-10-05 19:44:33] 2025-10-05 17:13:52,712 | INFO     | sum of deviations: 3377889365.5
[2025-10-05 19:44:33] 2025-10-05 17:13:52,712 | INFO     | mean x: 1759679448.5
[2025-10-05 19:44:33] 2025-10-05 17:13:52,712 | INFO     | mean y: 2323849.512345679
[2025-10-05 19:44:33] 2025-10-05 17:13:52,712 | INFO     | -- intersect: -4506591315.453269
[2025-10-05 19:44:33] 2025-10-05 17:13:52,712 | INFO     | intersect: -4506591315.453269
[2025-10-05 19:44:33] 2025-10-05 17:13:52,712 | INFO     | chi2: 0.00012747646451156307
[2025-10-05 19:44:33] 2025-10-05 17:13:52,712 | INFO     | current chi2=0.00012747646451156307 (change=17.28107002248045 %)
[2025-10-05 19:44:33] 2025-10-05 17:13:52,712 | INFO     | left removable region: 50
[2025-10-05 19:44:33] 2025-10-05 17:13:52,713 | INFO     | sum of square deviations: 697054930.0
[2025-10-05 19:44:33] 2025-10-05 17:13:52,713 | INFO     | sum of deviations: 1828878393.0
[2025-10-05 19:44:33] 2025-10-05 17:13:52,713 | INFO     | mean x: 1759680028.0
[2025-10-05 19:44:33] 2025-10-05 17:13:52,713 | INFO     | mean y: 2325402.3435114506
[2025-10-05 19:44:33] 2025-10-05 17:13:52,713 | INFO     | -- intersect: -4614585895.884929
[2025-10-05 19:44:33] 2025-10-05 17:13:52,714 | INFO     | intersect: -4614585895.884929
[2025-10-05 19:44:33] 2025-10-05 17:13:52,714 | INFO     | chi2: 0.00011892619580465059
[2025-10-05 19:44:33] 2025-10-05 17:13:52,714 | INFO     | -- intersect: -4614585895.884929
[2025-10-05 19:44:33] 2025-10-05 17:13:52,714 | INFO     | current memory leak: 2.62 B/s (using 131 data points, chi2=0.00)
[2025-10-05 19:44:33] 2025-10-05 17:13:52,715 | INFO     | could have reported an average CPU frequency of 2714 MHz (10 samples)
[2025-10-05 19:44:33] 2025-10-05 17:13:52,715 | INFO     | ..............................
[2025-10-05 19:44:33] 2025-10-05 17:13:52,715 | INFO     | . Timing measurements:
[2025-10-05 19:44:33] 2025-10-05 17:13:52,715 | INFO     | . get job = 0 s
[2025-10-05 19:44:33] 2025-10-05 17:13:52,715 | INFO     | . initial setup = 1 s
[2025-10-05 19:44:33] 2025-10-05 17:13:52,715 | INFO     | . payload setup = 8 s
[2025-10-05 19:44:33] 2025-10-05 17:13:52,715 | INFO     | . stage-in = 0 s
[2025-10-05 19:44:33] 2025-10-05 17:13:52,715 | INFO     | . payload execution = 11412 s
[2025-10-05 19:44:33] 2025-10-05 17:13:52,715 | INFO     | . stage-out = 1 s
[2025-10-05 19:44:33] 2025-10-05 17:13:52,715 | INFO     | . log creation = 0 s
[2025-10-05 19:44:33] 2025-10-05 17:13:52,715 | INFO     | ..............................
[2025-10-05 19:44:33] 2025-10-05 17:13:52,852 | INFO     | time since job start (11453s) is within the limit (172800.0s)
[2025-10-05 19:44:33] 2025-10-05 17:13:53,041 | INFO     | 
[2025-10-05 19:44:33] 2025-10-05 17:13:53,041 | INFO     | job summary report
[2025-10-05 19:44:33] 2025-10-05 17:13:53,042 | INFO     | --------------------------------------------------
[2025-10-05 19:44:33] 2025-10-05 17:13:53,042 | INFO     | PanDA job id: 6826518358
[2025-10-05 19:44:33] 2025-10-05 17:13:53,042 | INFO     | task id: 46373048
[2025-10-05 19:44:33] 2025-10-05 17:13:53,042 | INFO     | errors: (none)
[2025-10-05 19:44:33] 2025-10-05 17:13:53,042 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-05 19:44:33] 2025-10-05 17:13:53,042 | INFO     | pilot state: finished 
[2025-10-05 19:44:33] 2025-10-05 17:13:53,042 | INFO     | transexitcode: 0
[2025-10-05 19:44:33] 2025-10-05 17:13:53,042 | INFO     | exeerrorcode: 0
[2025-10-05 19:44:33] 2025-10-05 17:13:53,042 | INFO     | exeerrordiag: 
[2025-10-05 19:44:33] 2025-10-05 17:13:53,042 | INFO     | exitcode: 0
[2025-10-05 19:44:33] 2025-10-05 17:13:53,042 | INFO     | exitmsg: OK
[2025-10-05 19:44:33] 2025-10-05 17:13:53,043 | INFO     | cpuconsumptiontime: 43699 s
[2025-10-05 19:44:33] 2025-10-05 17:13:53,043 | INFO     | nevents: 400
[2025-10-05 19:44:33] 2025-10-05 17:13:53,043 | INFO     | neventsw: 0
[2025-10-05 19:44:33] 2025-10-05 17:13:53,043 | INFO     | pid: 1473214
[2025-10-05 19:44:33] 2025-10-05 17:13:53,043 | INFO     | pgrp: 1473214
[2025-10-05 19:44:33] 2025-10-05 17:13:53,043 | INFO     | corecount: 4
[2025-10-05 19:44:33] 2025-10-05 17:13:53,043 | INFO     | event service: False
[2025-10-05 19:44:33] 2025-10-05 17:13:53,043 | INFO     | sizes: {0: 2348681, 1: 2348880, 7: 2349142, 12: 2349170, 11424: 2379116, 11425: 2379115, 11426: 2388319, 11427: 2388375, 11435: 2388569}
[2025-10-05 19:44:33] 2025-10-05 17:13:53,043 | INFO     | --------------------------------------------------
[2025-10-05 19:44:33] 2025-10-05 17:13:53,043 | INFO     | 
[2025-10-05 19:44:33] 2025-10-05 17:13:53,043 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2025-10-05 19:44:33] 2025-10-05 17:13:53,074 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-05 19:44:33] 2025-10-05 17:13:53,075 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-05 19:44:33] 2025-10-05 17:13:53,075 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-05 19:44:33] 2025-10-05 17:13:53,075 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-05 19:44:33] 2025-10-05 17:13:53,075 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-05 19:44:33] 2025-10-05 17:13:53,075 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-05 19:44:33] 2025-10-05 17:13:53,075 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-05 19:44:33] 2025-10-05 17:13:53,075 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-05 19:44:33] 2025-10-05 17:13:53,075 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-05 19:44:33] 2025-10-05 17:13:53,075 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-05 19:44:33] 2025-10-05 17:13:53,075 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-05 19:44:33] 2025-10-05 17:13:53,075 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-05 19:44:33] 2025-10-05 17:13:53,075 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-05 19:44:33] 2025-10-05 17:13:53,076 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-05 19:44:33] 2025-10-05 17:13:53,076 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-05 19:44:33] 2025-10-05 17:13:53,076 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-05 19:44:33] 2025-10-05 17:13:53,076 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-05 19:44:33] 2025-10-05 17:13:53,076 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-05 19:44:33] 2025-10-05 17:13:53,076 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-05 19:44:33] 2025-10-05 17:13:53,076 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-05 19:44:33] 2025-10-05 17:13:53,076 | INFO     | job 6826518358 has completed (purged errors)
[2025-10-05 19:44:33] 2025-10-05 17:13:53,076 | INFO     | overall cleanup function is called
[2025-10-05 19:44:33] 2025-10-05 17:13:54,085 | INFO     | --- collectZombieJob: --- 10, [1473214]
[2025-10-05 19:44:33] 2025-10-05 17:13:54,085 | INFO     | zombie collector waiting for pid 1473214
[2025-10-05 19:44:33] 2025-10-05 17:13:54,086 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-05 19:44:33] 2025-10-05 17:13:54,086 | INFO     | collected zombie processes
[2025-10-05 19:44:33] 2025-10-05 17:13:54,086 | INFO     | will attempt to kill all subprocesses of pid=1473214
[2025-10-05 19:44:33] 2025-10-05 17:13:54,896 | INFO     | process IDs to be killed: [1473214] (in reverse order)
[2025-10-05 19:44:33] 2025-10-05 17:13:55,159 | WARNING  | found no corresponding commands to process id(s)
[2025-10-05 19:44:33] 2025-10-05 17:13:55,159 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-05 19:44:33] 2025-10-05 17:13:55,190 | INFO     | did not find any defunct processes belonging to 1473214
[2025-10-05 19:44:33] 2025-10-05 17:13:55,219 | INFO     | did not find any defunct processes belonging to 1473214
[2025-10-05 19:44:33] 2025-10-05 17:13:55,220 | INFO     | ready for new job
[2025-10-05 19:44:33] 2025-10-05 17:13:55,220 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-05 19:44:33] 2025-10-05 17:13:55,222 | INFO     | ***************************************
[2025-10-05 19:44:33] 2025-10-05 17:13:55,223 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-05 19:44:33] 2025-10-05 17:13:55,223 | INFO     | ***************************************
[2025-10-05 19:44:33] 2025-10-05 17:13:55,223 | INFO     | 
[2025-10-05 19:44:33] 2025-10-05 17:13:55,231 | INFO     | architecture information:
[2025-10-05 19:44:33] 2025-10-05 17:13:55,232 | INFO     | executing command: cat /etc/os-release
[2025-10-05 19:44:33] 2025-10-05 17:13:55,257 | INFO     | cat /etc/os-release:
[2025-10-05 19:44:33] NAME="CentOS Linux"
[2025-10-05 19:44:33] VERSION="7 (Core)"
[2025-10-05 19:44:33] ID="centos"
[2025-10-05 19:44:33] ID_LIKE="rhel fedora"
[2025-10-05 19:44:33] VERSION_ID="7"
[2025-10-05 19:44:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-05 19:44:33] ANSI_COLOR="0;31"
[2025-10-05 19:44:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-05 19:44:33] HOME_URL="https://www.centos.org/"
[2025-10-05 19:44:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-05 19:44:33] 
[2025-10-05 19:44:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-05 19:44:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-05 19:44:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-05 19:44:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-05 19:44:33] 
[2025-10-05 19:44:33] 2025-10-05 17:13:55,257 | INFO     | ***************************************
[2025-10-05 19:44:33] 2025-10-05 17:13:55,762 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2025-10-05 19:44:33] 2025-10-05 17:13:55,786 | INFO     | sufficient remaining disk space (3324771303424 B)
[2025-10-05 19:44:33] 2025-10-05 17:13:55,786 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-05 19:44:33] 2025-10-05 17:13:55,787 | INFO     | current server update state: UPDATING_FINAL
[2025-10-05 19:44:33] 2025-10-05 17:13:55,787 | INFO     | update_server=False
[2025-10-05 19:44:33] 2025-10-05 17:13:55,787 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-05 19:44:33] 2025-10-05 17:13:55,787 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-05 19:44:33] 2025-10-05 17:13:56,013 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-05 19:44:33] 2025-10-05 17:13:56,014 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-05 19:44:33] 2025-10-05 17:13:56,014 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-05 19:44:33] 2025-10-05 17:13:56,014 | INFO     | will abort loop
[2025-10-05 19:44:33] 2025-10-05 17:13:56,257 | INFO     | all payload control threads have been joined
[2025-10-05 19:44:33] 2025-10-05 17:13:56,597 | INFO     | all data control threads have been joined
[2025-10-05 19:44:33] 2025-10-05 17:13:56,792 | INFO     | [job] retrieve thread has finished
[2025-10-05 19:44:33] 2025-10-05 17:13:56,930 | INFO     | [job] validate thread has finished
[2025-10-05 19:44:33] 2025-10-05 17:13:56,961 | INFO     | all job control threads have been joined
[2025-10-05 19:44:33] 2025-10-05 17:13:57,018 | INFO     | [job] job monitor thread has finished
[2025-10-05 19:44:33] 2025-10-05 17:13:57,057 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-05 19:44:33] 2025-10-05 17:13:57,263 | INFO     | [payload] control thread has finished
[2025-10-05 19:44:33] 2025-10-05 17:13:57,271 | INFO     | [job] create_data_payload thread has finished
[2025-10-05 19:44:33] 2025-10-05 17:13:57,577 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-05 19:44:33] 2025-10-05 17:13:57,600 | INFO     | [data] control thread has finished
[2025-10-05 19:44:33] 2025-10-05 17:13:57,685 | INFO     | [payload] failed_post thread has finished
[2025-10-05 19:44:33] 2025-10-05 17:13:57,766 | INFO     | [data] copytool_in thread has finished
[2025-10-05 19:44:33] 2025-10-05 17:13:57,820 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-05 19:44:33] 2025-10-05 17:13:57,966 | INFO     | [job] control thread has finished
[2025-10-05 19:44:33] 2025-10-05 17:13:57,985 | INFO     | [payload] validate_pre thread has finished
[2025-10-05 19:44:33] 2025-10-05 17:13:58,127 | INFO     | [payload] validate_post thread has finished
[2025-10-05 19:44:33] 2025-10-05 17:13:58,190 | INFO     | [payload] execute_payloads thread has finished
[2025-10-05 19:44:33] 2025-10-05 17:13:58,825 | INFO     | [job] queue monitor thread has finished
[2025-10-05 19:44:33] 2025-10-05 17:13:59,063 | INFO     | [data] copytool_out thread has finished
[2025-10-05 19:44:33] 2025-10-05 17:13:59,793 | INFO     | [data] queue_monitor thread has finished
[2025-10-05 19:44:33] 2025-10-05 17:14:16,997 | INFO     | [monitor] cgroup control has ended
[2025-10-05 19:44:33] 2025-10-05 17:14:17,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23043242972992)>', '<ExcThread(monitor, started 23043002824448)>']
[2025-10-05 19:44:33] 2025-10-05 17:14:23,022 | INFO     | all workflow threads have been joined
[2025-10-05 19:44:33] 2025-10-05 17:14:23,022 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-05 19:44:33] 2025-10-05 17:14:23,023 | INFO     | traces error code: 0
[2025-10-05 19:44:33] 2025-10-05 17:14:23,023 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-05 19:44:33] 2025-10-05 17:14:26,826 | INFO     | PID=1459466 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-05 19:44:33] 2025-10-05 17:14:26,827 | INFO     | .. there are 16 such processes running
[2025-10-05 19:44:33] 2025-10-05 17:14:26,828 | INFO     | found 0 job(s) in 20 queues
[2025-10-05 19:44:33] 2025-10-05 17:14:26,828 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-05 19:44:33] 2025-10-05 17:14:26,828 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-05 19:44:33] 2025-10-05 17:14:26,828 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-05 19:44:33] 2025-10-05 17:14:26,828 | INFO     | [monitor] control thread has ended
[2025-10-05 19:44:33] 2025-10-05 17:14:26,966 [wrapper] ==== pilot stdout END ====
[2025-10-05 19:44:33] 2025-10-05 17:14:26,970 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-05 19:44:33] 2025-10-05 17:14:26,973 [wrapper] pilotpid: 1459466
[2025-10-05 19:44:33] 2025-10-05 17:14:26,975 [wrapper] Pilot exit status: 0
[2025-10-05 19:44:33] 2025-10-05 17:14:26,988 [wrapper] pandaids: 6826518358 6826518358
[2025-10-05 19:44:33] 2025-10-05 17:14:27,149 [wrapper] cleanup supervisor_pilot 2352216 1459467
[2025-10-05 19:44:33] 2025-10-05 17:14:27,153 [wrapper] Test setup, not cleaning
[2025-10-05 19:44:33] 2025-10-05 17:14:27,156 [wrapper] apfmon messages muted
[2025-10-05 19:44:33] 2025-10-05 17:14:27,159 [wrapper] ==== wrapper stdout END ====
[2025-10-05 19:44:33] 2025-10-05 17:14:27,162 [wrapper] ==== wrapper stderr END ====
[2025-10-05 19:44:33]  *** Error codes and diagnostics ***
[2025-10-05 19:44:33]     "exeErrorCode": 0,
[2025-10-05 19:44:33]     "exeErrorDiag": "",
[2025-10-05 19:44:33]     "pilotErrorCode": 0,
[2025-10-05 19:44:33]     "pilotErrorDiag": "",
[2025-10-05 19:44:33]  *** Listing of results directory ***
[2025-10-05 19:44:33] total 625640
[2025-10-05 19:44:33] drwx------ 4 boinc boinc      4096 Jul 31 15:00 pilot3
[2025-10-05 19:44:33] -rw-r--r-- 1 boinc boinc    552446 Oct  1 20:51 pilot3.tar.gz
[2025-10-05 19:44:33] -rwx------ 1 boinc boinc     36292 Oct  1 21:12 runpilot2-wrapper.sh
[2025-10-05 19:44:33] -rw-r--r-- 1 boinc boinc      5112 Oct  1 21:12 queuedata.json
[2025-10-05 19:44:33] -rw-r--r-- 1 boinc boinc       100 Oct  5 12:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-05 19:44:33] -rwxr-xr-x 1 boinc boinc      7986 Oct  5 12:21 run_atlas
[2025-10-05 19:44:33] -rw-r--r-- 1 boinc boinc       105 Oct  5 12:21 job.xml
[2025-10-05 19:44:33] -rw-r--r-- 3 boinc boinc 222154428 Oct  5 12:21 EVNT.46373045._002912.pool.root.1
[2025-10-05 19:44:33] -rw-r--r-- 3 boinc boinc 222154428 Oct  5 12:21 ATLAS.root_0
[2025-10-05 19:44:33] -rw-r--r-- 2 boinc boinc     15120 Oct  5 12:21 start_atlas.sh
[2025-10-05 19:44:33] drwxrwx--x 2 boinc boinc      4096 Oct  5 12:21 shared
[2025-10-05 19:44:33] -rw-r--r-- 2 boinc boinc    565607 Oct  5 12:21 input.tar.gz
[2025-10-05 19:44:33] -rw-r--r-- 1 boinc boinc         0 Oct  5 12:21 boinc_lockfile
[2025-10-05 19:44:33] -rw-r--r-- 1 boinc boinc      2538 Oct  5 16:02 pandaJob.out
[2025-10-05 19:44:33] -rw------- 1 boinc boinc    973982 Oct  5 16:02 agis_schedconf.cvmfs.json
[2025-10-05 19:44:33] -rw-r--r-- 1 boinc boinc      6691 Oct  5 18:22 init_data.xml
[2025-10-05 19:44:33] -rw-r--r-- 1 boinc boinc       528 Oct  5 19:13 boinc_task_state.xml
[2025-10-05 19:44:33] -rw------- 1 boinc boinc 188523096 Oct  5 19:13 HITS.46373048._086364.pool.root.1
[2025-10-05 19:44:33] -rw------- 1 boinc boinc      1028 Oct  5 19:13 memory_monitor_summary.json
[2025-10-05 19:44:33] -rw------- 1 boinc boinc   1560401 Oct  5 19:13 agis_ddmendpoints.agis.ALL.json
[2025-10-05 19:44:33] -rw------- 1 boinc boinc    368462 Oct  5 19:13 log.46373048._086364.job.log.tgz.1
[2025-10-05 19:44:33] -rw------- 1 boinc boinc      7785 Oct  5 19:13 heartbeat.json
[2025-10-05 19:44:33] -rw------- 1 boinc boinc        97 Oct  5 19:14 pilot_heartbeat.json
[2025-10-05 19:44:33] -rw------- 1 boinc boinc       823 Oct  5 19:14 pilotlog.txt
[2025-10-05 19:44:33] -rw------- 1 boinc boinc   1602577 Oct  5 19:14 log.46373048._086364.job.log.1
[2025-10-05 19:44:33] -rw------- 1 boinc boinc       357 Oct  5 19:14 output.list
[2025-10-05 19:44:33] -rw-r--r-- 1 boinc boinc       620 Oct  5 19:14 runtime_log
[2025-10-05 19:44:33] -rw------- 1 boinc boinc   1986560 Oct  5 19:14 result.tar.gz
[2025-10-05 19:44:33] -rw-r--r-- 1 boinc boinc      9147 Oct  5 19:14 runtime_log.err
[2025-10-05 19:44:33] -rw------- 1 boinc boinc       792 Oct  5 19:14 VB2KDmbQHO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8gCNDmCg4WXo.diag
[2025-10-05 19:44:33] -rw-r--r-- 1 boinc boinc        26 Oct  5 19:44 wrapper_checkpoint.txt
[2025-10-05 19:44:33] -rw-r--r-- 1 boinc boinc      8192 Oct  5 19:44 boinc_mmap_file
[2025-10-05 19:44:33] -rw-r--r-- 1 boinc boinc     22709 Oct  5 19:44 stderr.txt
[2025-10-05 19:44:33] HITS file was successfully produced:
[2025-10-05 19:44:33] -rw------- 1 boinc boinc 188523096 Oct  5 19:13 shared/HITS.pool.root.1
[2025-10-05 19:44:33]  *** Contents of shared directory: ***
[2025-10-05 19:44:33] total 403576
[2025-10-05 19:44:33] -rw-r--r-- 3 boinc boinc 222154428 Oct  5 12:21 ATLAS.root_0
[2025-10-05 19:44:33] -rw-r--r-- 2 boinc boinc     15120 Oct  5 12:21 start_atlas.sh
[2025-10-05 19:44:33] -rw-r--r-- 2 boinc boinc    565607 Oct  5 12:21 input.tar.gz
[2025-10-05 19:44:33] -rw------- 1 boinc boinc 188523096 Oct  5 19:13 HITS.pool.root.1
[2025-10-05 19:44:33] -rw------- 1 boinc boinc   1986560 Oct  5 19:14 result.tar.gz
19:44:34 (1455441): run_atlas exited; CPU time 44403.548466
19:44:34 (1455441): called boinc_finish(0)

</stderr_txt>
]]>

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