Name | LV3LDmuHEP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmFFDMDm8n488n_1 |
Workunit | 235430833 |
Created | 4 Oct 2025, 12:38:33 UTC |
Sent | 4 Oct 2025, 14:51:48 UTC |
Report deadline | 12 Oct 2025, 14:51:48 UTC |
Received | 4 Oct 2025, 17:19:21 UTC |
Server state | Over |
Outcome | Validate error |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 10696216 |
Run time | 16 min 46 sec |
CPU time | 55 min 28 sec |
Validate state | Invalid |
Credit | 0.00 |
Device peak FLOPS | 4.00 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 2.76 GB |
Peak swap size | 10.36 GB |
Peak disk usage | 629.00 MB |
<core_client_version>8.2.2</core_client_version> <![CDATA[ <stderr_txt> 17:51:28 (2176477): wrapper (7.7.26015): starting 17:51:28 (2176477): wrapper: running run_atlas (--nthreads 12) [2025-10-04 17:51:28] Arguments: --nthreads 12 [2025-10-04 17:51:28] Threads: 12 [2025-10-04 17:51:28] Checking for CVMFS [2025-10-04 17:51:29] Probing /cvmfs/atlas.cern.ch... OK [2025-10-04 17:51:29] Probing /cvmfs/atlas-condb.cern.ch... OK [2025-10-04 17:51:29] Running cvmfs_config stat atlas.cern.ch [2025-10-04 17:51:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2025-10-04 17:51:29] 2.9.2.0 2154081 36 48612 151333 3 188 22871351 36864001 0 130560 0 59740 99.973 2797 743 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1 [2025-10-04 17:51:29] CVMFS is ok [2025-10-04 17:51:29] Efficiency of ATLAS tasks can be improved by the following measure(s): [2025-10-04 17:51:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2025-10-04 17:51:29] Further information can be found at the LHC@home message board. [2025-10-04 17:51:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2025-10-04 17:51:29] Checking for apptainer binary... [2025-10-04 17:51:29] Using apptainer found in PATH at /usr/bin/apptainer [2025-10-04 17:51:29] Running /usr/bin/apptainer --version [2025-10-04 17:51:29] apptainer version 1.4.1-1.1 [2025-10-04 17:51:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2025-10-04 17:51:29] atlasA215b [2025-10-04 17:51:29] apptainer works [2025-10-04 17:51:29] Set ATHENA_PROC_NUMBER=12 [2025-10-04 17:51:29] Set ATHENA_CORE_NUMBER=12 [2025-10-04 17:51:29] Starting ATLAS job with PandaID=6829512847 [2025-10-04 17:51:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh 18:15:02 (2193789): wrapper (7.7.26015): starting 18:15:02 (2193789): wrapper: running run_atlas (--nthreads 12) [2025-10-04 18:15:02] Arguments: --nthreads 12 [2025-10-04 18:15:02] Threads: 12 [2025-10-04 18:15:02] This job has been restarted, cleaning up previous attempt [2025-10-04 18:15:02] Checking for CVMFS [2025-10-04 18:15:03] Probing /cvmfs/atlas.cern.ch... OK [2025-10-04 18:15:04] Probing /cvmfs/atlas-condb.cern.ch... OK [2025-10-04 18:15:04] Running cvmfs_config stat atlas.cern.ch [2025-10-04 18:15:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2025-10-04 18:15:04] 2.9.2.0 2193913 0 30036 151334 3 1 22876436 36864001 0 130560 0 0 0.000 1291 1970 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1 [2025-10-04 18:15:04] CVMFS is ok [2025-10-04 18:15:04] Efficiency of ATLAS tasks can be improved by the following measure(s): [2025-10-04 18:15:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2025-10-04 18:15:04] Further information can be found at the LHC@home message board. [2025-10-04 18:15:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2025-10-04 18:15:04] Checking for apptainer binary... [2025-10-04 18:15:04] Using apptainer found in PATH at /usr/bin/apptainer [2025-10-04 18:15:04] Running /usr/bin/apptainer --version [2025-10-04 18:15:04] apptainer version 1.4.1-1.1 [2025-10-04 18:15:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2025-10-04 18:15:04] atlasA215b [2025-10-04 18:15:04] apptainer works [2025-10-04 18:15:04] Set ATHENA_PROC_NUMBER=12 [2025-10-04 18:15:04] Set ATHENA_CORE_NUMBER=12 [2025-10-04 18:15:04] Starting ATLAS job with PandaID=6829512847 [2025-10-04 18:15:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2025-10-04 18:24:20] *** The last 200 lines of the pilot log: *** [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | WARNING | format EVNTtoHITS has no such key: dbTime [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | WARNING | wrong length of table data, x=[1759594537.0, 1759594598.0, 1759594659.0, 1759594720.0, 1759594781.0, 1759594842.0], y=[2298.0, 1291428.0, 1448512.0, 2376186.0, 260 [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | INFO | could have reported an average CPU frequency of 3539 MHz (4 samples) [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | INFO | .............................. [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | INFO | . Timing measurements: [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | INFO | . get job = 0 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | INFO | . initial setup = 0 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | INFO | . payload setup = 4 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | . stage-in = 0 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | . payload execution = 354 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | . stage-out = 0 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | . log creation = 0 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | .............................. [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | building log extracts (sent to the server as 'pilotLog') [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-6829512847/pilotlog.txt [2025-10-04 18:24:20] 2025-10-04 16:23:34,955 | WARNING | detected the following tail of warning/fatal messages in the pilot log: [2025-10-04 18:24:20] - Log from pilotlog.txt - [2025-10-04 18:24:20] 2025-10-04 16:23:34,939 | INFO | using path: /local/data/boinc/slots/0/PanDA_Pilot-6829512847/memory_monitor_summary.json (trf name=prmon) [2025-10-04 18:24:20] 2025-10-04 16:23:34,939 | INFO | extracted standard info from prmon json [2025-10-04 18:24:20] 2025-10-04 16:23:34,939 | INFO | extracted standard memory fields from prmon json [2025-10-04 18:24:20] 2025-10-04 16:23:34,939 | WARNING | GPU info not found in prmon json: 'gpu' [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | WARNING | format EVNTtoHITS has no such key: dbData [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | WARNING | format EVNTtoHITS has no such key: dbTime [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | WARNING | wrong length of table data, x=[1759594537.0, 1759594598.0, 1759594659.0, 1759594720.0, 1759594781.0, 1759594842.0], y=[2298.0, 1291428.0, 1448512.0, 2376186.0, 260 [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | INFO | could have reported an average CPU frequency of 3539 MHz (4 samples) [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | INFO | .............................. [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | INFO | . Timing measurements: [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | INFO | . get job = 0 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | INFO | . initial setup = 0 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | INFO | . payload setup = 4 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | . stage-in = 0 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | . payload execution = 354 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | . stage-out = 0 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | . log creation = 0 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | .............................. [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | building log extracts (sent to the server as 'pilotLog') [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-6829512847/pilotlog.txt [2025-10-04 18:24:20] 2025-10-04 16:23:34,955 | WARNING | [2025-10-04 18:24:20] [begin log extracts] [2025-10-04 18:24:20] - Log from pilotlog.txt - [2025-10-04 18:24:20] 2025-10-04 16:23:34,939 | INFO | using path: /local/data/boinc/slots/0/PanDA_Pilot-6829512847/memory_monitor_summary.json (trf name=prmon) [2025-10-04 18:24:20] 2025-10-04 16:23:34,939 | INFO | extracted standard info from prmon json [2025-10-04 18:24:20] 2025-10-04 16:23:34,939 | INFO | extracted standard memory fields from prmon json [2025-10-04 18:24:20] 2025-10-04 16:23:34,939 | WARNING | GPU info not found in prmon json: 'gpu' [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | WARNING | format EVNTtoHITS has no such key: dbData [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | WARNING | format EVNTtoHITS has no such key: dbTime [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | WARNING | wrong length of table data, x=[1759594537.0, 1759594598.0, 1759594659.0, 1759594720.0, 1759594781.0, 1759594842.0], y=[2298.0, 1291428.0, 1448512.0, 2376186.0, 260 [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | INFO | could have reported an average CPU frequency of 3539 MHz (4 samples) [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | INFO | .............................. [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | INFO | . Timing measurements: [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | INFO | . get job = 0 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | INFO | . initial setup = 0 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,940 | INFO | . payload setup = 4 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | . stage-in = 0 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | . payload execution = 354 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | . stage-out = 0 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | . log creation = 0 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | .............................. [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | building log extracts (sent to the server as 'pilotLog') [2025-10-04 18:24:20] 2025-10-04 16:23:34,941 | INFO | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-6829512847/pilotlog.txt [2025-10-04 18:24:20] [end log extracts] [2025-10-04 18:24:20] 2025-10-04 16:23:34,956 | WARNING | pilotErrorCodes = [1305, 1328] (will report primary/first error code) [2025-10-04 18:24:20] 2025-10-04 16:23:34,956 | WARNING | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a [2025-10-04 18:24:20] 2025-10-04 16:23:34,999 | INFO | [2025-10-04 18:24:20] 2025-10-04 16:23:34,999 | INFO | job summary report [2025-10-04 18:24:20] 2025-10-04 16:23:34,999 | INFO | -------------------------------------------------- [2025-10-04 18:24:20] 2025-10-04 16:23:34,999 | INFO | PanDA job id: 6829512847 [2025-10-04 18:24:20] 2025-10-04 16:23:34,999 | INFO | task id: 46376905 [2025-10-04 18:24:20] 2025-10-04 16:23:34,999 | INFO | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-04 16:21:23,480 CRITICAL Transform executor raised TransformValidationExceptio [2025-10-04 18:24:20] 2025-10-04 16:23:34,999 | INFO | error 2/2: 1328: Invalid memory reference or a segmentation fault in payload: EVNTtoHITS got a SIGSEGV signal (exit code 139); Logfile error in log.EVNTtoHITS: "Co [2025-10-04 18:24:20] 2025-10-04 16:23:34,999 | INFO | pilot error code: 1328 [2025-10-04 18:24:20] 2025-10-04 16:23:34,999 | INFO | pilot error diag: Invalid memory reference or a segmentation fault in payload: EVNTtoHITS got a SIGSEGV signal (exit code 139); Logfile error in log.EVNTtoHITS: "C [2025-10-04 18:24:20] 2025-10-04 16:23:34,999 | INFO | status: LOG_TRANSFER = DONE [2025-10-04 18:24:20] 2025-10-04 16:23:34,999 | INFO | pilot state: failed [2025-10-04 18:24:20] 2025-10-04 16:23:34,999 | INFO | transexitcode: 65 [2025-10-04 18:24:20] 2025-10-04 16:23:34,999 | INFO | exeerrorcode: 0 [2025-10-04 18:24:20] 2025-10-04 16:23:34,999 | INFO | exeerrordiag: [2025-10-04 18:24:20] 2025-10-04 16:23:34,999 | INFO | exitcode: 65 [2025-10-04 18:24:20] 2025-10-04 16:23:34,999 | INFO | exitmsg: EVNTtoHITS got a SIGSEGV signal (exit code 139); Logfile error in log.EVNTtoHITS: "CoreDumpSvc FATAL Caught fatal signal. Printing details to stdout."; [2025-10-04 18:24:20] 2025-10-04 16:23:34,999 | INFO | cpuconsumptiontime: 555 s [2025-10-04 18:24:20] 2025-10-04 16:23:34,999 | INFO | nevents: 0 [2025-10-04 18:24:20] 2025-10-04 16:23:34,999 | INFO | neventsw: 0 [2025-10-04 18:24:20] 2025-10-04 16:23:35,000 | INFO | pid: 2204646 [2025-10-04 18:24:20] 2025-10-04 16:23:35,000 | INFO | pgrp: 2204646 [2025-10-04 18:24:20] 2025-10-04 16:23:35,000 | INFO | corecount: 12 [2025-10-04 18:24:20] 2025-10-04 16:23:35,000 | INFO | event service: False [2025-10-04 18:24:20] 2025-10-04 16:23:35,000 | INFO | sizes: {0: 2348819, 4: 2349081, 11: 2349109, 362: 2376115, 363: 2380413, 366: 2380469, 487: 2380791} [2025-10-04 18:24:20] 2025-10-04 16:23:35,000 | INFO | -------------------------------------------------- [2025-10-04 18:24:20] 2025-10-04 16:23:35,000 | INFO | [2025-10-04 18:24:20] 2025-10-04 16:23:35,000 | INFO | executing command: ls -lF /local/data/boinc/slots/0 [2025-10-04 18:24:20] 2025-10-04 16:23:35,019 | INFO | queue jobs had 0 job(s) [purged] [2025-10-04 18:24:20] 2025-10-04 16:23:35,019 | INFO | queue payloads had 0 job(s) [purged] [2025-10-04 18:24:20] 2025-10-04 16:23:35,019 | INFO | queue data_in had 0 job(s) [purged] [2025-10-04 18:24:20] 2025-10-04 16:23:35,019 | INFO | queue data_out had 0 job(s) [purged] [2025-10-04 18:24:20] 2025-10-04 16:23:35,019 | INFO | queue current_data_in had 0 job(s) [purged] [2025-10-04 18:24:20] 2025-10-04 16:23:35,019 | INFO | queue validated_jobs had 0 job(s) [purged] [2025-10-04 18:24:20] 2025-10-04 16:23:35,019 | INFO | queue validated_payloads had 0 job(s) [purged] [2025-10-04 18:24:20] 2025-10-04 16:23:35,019 | INFO | queue monitored_payloads had 0 job(s) [purged] [2025-10-04 18:24:20] 2025-10-04 16:23:35,019 | INFO | queue finished_jobs had 0 job(s) [purged] [2025-10-04 18:24:20] 2025-10-04 16:23:35,019 | INFO | queue finished_payloads had 0 job(s) [purged] [2025-10-04 18:24:20] 2025-10-04 16:23:35,019 | INFO | queue finished_data_in had 1 job(s) [purged] [2025-10-04 18:24:20] 2025-10-04 16:23:35,019 | INFO | queue finished_data_out had 0 job(s) [purged] [2025-10-04 18:24:20] 2025-10-04 16:23:35,019 | INFO | queue failed_jobs had 0 job(s) [purged] [2025-10-04 18:24:20] 2025-10-04 16:23:35,019 | INFO | queue failed_payloads had 0 job(s) [purged] [2025-10-04 18:24:20] 2025-10-04 16:23:35,019 | INFO | queue failed_data_in had 0 job(s) [purged] [2025-10-04 18:24:20] 2025-10-04 16:23:35,020 | INFO | queue failed_data_out had 0 job(s) [purged] [2025-10-04 18:24:20] 2025-10-04 16:23:35,020 | INFO | queue completed_jobs had 0 job(s) [purged] [2025-10-04 18:24:20] 2025-10-04 16:23:35,020 | INFO | queue completed_jobids has 1 job(s) [2025-10-04 18:24:20] 2025-10-04 16:23:35,020 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2025-10-04 18:24:20] 2025-10-04 16:23:35,020 | INFO | queue messages had 0 job(s) [purged] [2025-10-04 18:24:20] 2025-10-04 16:23:35,020 | INFO | job 6829512847 has completed (purged errors) [2025-10-04 18:24:20] 2025-10-04 16:23:35,020 | INFO | overall cleanup function is called [2025-10-04 18:24:20] 2025-10-04 16:23:36,027 | INFO | --- collectZombieJob: --- 10, [2204646] [2025-10-04 18:24:20] 2025-10-04 16:23:36,027 | INFO | zombie collector waiting for pid 2204646 [2025-10-04 18:24:20] 2025-10-04 16:23:36,028 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2025-10-04 18:24:20] 2025-10-04 16:23:36,028 | INFO | collected zombie processes [2025-10-04 18:24:20] 2025-10-04 16:23:36,028 | INFO | will attempt to kill all subprocesses of pid=2204646 [2025-10-04 18:24:20] 2025-10-04 16:23:36,116 | INFO | process IDs to be killed: [2204646] (in reverse order) [2025-10-04 18:24:20] 2025-10-04 16:23:36,163 | WARNING | found no corresponding commands to process id(s) [2025-10-04 18:24:20] 2025-10-04 16:23:36,163 | INFO | Do not look for orphan processes in BOINC jobs [2025-10-04 18:24:20] 2025-10-04 16:23:36,167 | INFO | did not find any defunct processes belonging to 2204646 [2025-10-04 18:24:20] 2025-10-04 16:23:36,170 | INFO | did not find any defunct processes belonging to 2204646 [2025-10-04 18:24:20] 2025-10-04 16:23:36,170 | INFO | ready for new job [2025-10-04 18:24:20] 2025-10-04 16:23:36,170 | INFO | pilot has finished with previous job - re-establishing logging [2025-10-04 18:24:20] 2025-10-04 16:23:36,170 | INFO | *************************************** [2025-10-04 18:24:20] 2025-10-04 16:23:36,170 | INFO | *** PanDA Pilot version 3.10.5.57 *** [2025-10-04 18:24:20] 2025-10-04 16:23:36,170 | INFO | *************************************** [2025-10-04 18:24:20] 2025-10-04 16:23:36,170 | INFO | [2025-10-04 18:24:20] 2025-10-04 16:23:36,171 | INFO | architecture information: [2025-10-04 18:24:20] 2025-10-04 16:23:36,171 | INFO | executing command: cat /etc/os-release [2025-10-04 18:24:20] 2025-10-04 16:23:36,186 | INFO | cat /etc/os-release: [2025-10-04 18:24:20] NAME="CentOS Linux" [2025-10-04 18:24:20] VERSION="7 (Core)" [2025-10-04 18:24:20] ID="centos" [2025-10-04 18:24:20] ID_LIKE="rhel fedora" [2025-10-04 18:24:20] VERSION_ID="7" [2025-10-04 18:24:20] PRETTY_NAME="CentOS Linux 7 (Core)" [2025-10-04 18:24:20] ANSI_COLOR="0;31" [2025-10-04 18:24:20] CPE_NAME="cpe:/o:centos:centos:7" [2025-10-04 18:24:20] HOME_URL="https://www.centos.org/" [2025-10-04 18:24:20] BUG_REPORT_URL="https://bugs.centos.org/" [2025-10-04 18:24:20] [2025-10-04 18:24:20] CENTOS_MANTISBT_PROJECT="CentOS-7" [2025-10-04 18:24:20] CENTOS_MANTISBT_PROJECT_VERSION="7" [2025-10-04 18:24:20] REDHAT_SUPPORT_PRODUCT="centos" [2025-10-04 18:24:20] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2025-10-04 18:24:20] [2025-10-04 18:24:20] 2025-10-04 16:23:36,186 | INFO | *************************************** [2025-10-04 18:24:20] 2025-10-04 16:23:36,690 | INFO | executing command: df -mP /local/data/boinc/slots/0 [2025-10-04 18:24:20] 2025-10-04 16:23:36,708 | INFO | sufficient remaining disk space (338432098304 B) [2025-10-04 18:24:20] 2025-10-04 16:23:36,708 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2025-10-04 18:24:20] 2025-10-04 16:23:36,709 | INFO | current server update state: UPDATING_FINAL [2025-10-04 18:24:20] 2025-10-04 16:23:36,709 | INFO | update_server=False [2025-10-04 18:24:20] 2025-10-04 16:23:36,709 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2025-10-04 18:24:20] 2025-10-04 16:23:36,709 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2025-10-04 18:24:20] 2025-10-04 16:23:36,709 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2025-10-04 18:24:20] 2025-10-04 16:23:36,709 | INFO | aborting loop [2025-10-04 18:24:20] 2025-10-04 16:23:36,709 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2025-10-04 18:24:20] 2025-10-04 16:23:36,861 | INFO | all payload control threads have been joined [2025-10-04 18:24:20] 2025-10-04 16:23:37,245 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2025-10-04 18:24:20] 2025-10-04 16:23:37,456 | INFO | all data control threads have been joined [2025-10-04 18:24:20] 2025-10-04 16:23:37,465 | INFO | all job control threads have been joined [2025-10-04 18:24:20] 2025-10-04 16:23:37,714 | INFO | [job] retrieve thread has finished [2025-10-04 18:24:20] 2025-10-04 16:23:37,715 | INFO | [job] job monitor thread has finished [2025-10-04 18:24:20] 2025-10-04 16:23:37,715 | INFO | [job] queue monitor thread has finished [2025-10-04 18:24:20] 2025-10-04 16:23:37,744 | INFO | [data] copytool_in thread has finished [2025-10-04 18:24:20] 2025-10-04 16:23:37,770 | INFO | [payload] execute_payloads thread has finished [2025-10-04 18:24:20] 2025-10-04 16:23:37,821 | INFO | [payload] validate_post thread has finished [2025-10-04 18:24:20] 2025-10-04 16:23:37,867 | INFO | [payload] control thread has finished [2025-10-04 18:24:20] 2025-10-04 16:23:38,364 | INFO | [payload] failed_post thread has finished [2025-10-04 18:24:20] 2025-10-04 16:23:38,425 | INFO | [job] validate thread has finished [2025-10-04 18:24:20] 2025-10-04 16:23:38,461 | INFO | [data] control thread has finished [2025-10-04 18:24:20] 2025-10-04 16:23:38,470 | INFO | [job] control thread has finished [2025-10-04 18:24:20] 2025-10-04 16:23:38,529 | INFO | [job] create_data_payload thread has finished [2025-10-04 18:24:20] 2025-10-04 16:23:38,621 | INFO | [payload] validate_pre thread has finished [2025-10-04 18:24:20] 2025-10-04 16:23:38,715 | INFO | [data] copytool_out thread has finished [2025-10-04 18:24:20] 2025-10-04 16:23:38,910 | INFO | [payload] run_realtimelog thread has finished [2025-10-04 18:24:20] 2025-10-04 16:23:41,252 | INFO | [data] queue_monitor thread has finished [2025-10-04 18:24:20] 2025-10-04 16:24:07,708 | INFO | PID=2198047 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P [2025-10-04 18:24:20] 2025-10-04 16:24:07,708 | INFO | found 0 job(s) in 20 queues [2025-10-04 18:24:20] 2025-10-04 16:24:07,708 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2025-10-04 18:24:20] 2025-10-04 16:24:07,708 | WARNING | will wait for a maximum of 300 s for threads to finish [2025-10-04 18:24:20] 2025-10-04 16:24:14,047 | INFO | [monitor] cgroup control has ended [2025-10-04 18:24:20] 2025-10-04 16:24:14,940 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140133417363264)>', '<ExcThread(monitor, started 140132451587840)>'] [2025-10-04 18:24:20] 2025-10-04 16:24:15,750 | WARNING | job_aborted has been set - aborting pilot monitoring [2025-10-04 18:24:20] 2025-10-04 16:24:15,750 | INFO | [monitor] control thread has ended [2025-10-04 18:24:20] 2025-10-04 16:24:19,965 | INFO | all workflow threads have been joined [2025-10-04 18:24:20] 2025-10-04 16:24:19,966 | INFO | end of generic workflow (traces error code: 0) [2025-10-04 18:24:20] 2025-10-04 16:24:19,966 | INFO | traces error code: 0 [2025-10-04 18:24:20] 2025-10-04 16:24:19,966 | INFO | pilot has finished (exit code=0, shell exit code=0) [2025-10-04 18:24:20] 2025-10-04 16:24:20,046 [wrapper] ==== pilot stdout END ==== [2025-10-04 18:24:20] 2025-10-04 16:24:20,050 [wrapper] ==== wrapper stdout RESUME ==== [2025-10-04 18:24:20] 2025-10-04 16:24:20,054 [wrapper] pilotpid: 2198047 [2025-10-04 18:24:20] 2025-10-04 16:24:20,058 [wrapper] Pilot exit status: 0 [2025-10-04 18:24:20] 2025-10-04 16:24:20,070 [wrapper] pandaids: 6829512847 6829512847 [2025-10-04 18:24:20] 2025-10-04 16:24:20,101 [wrapper] cleanup supervisor_pilot 2198053 2198048 [2025-10-04 18:24:20] 2025-10-04 16:24:20,105 [wrapper] Test setup, not cleaning [2025-10-04 18:24:20] 2025-10-04 16:24:20,109 [wrapper] apfmon messages muted [2025-10-04 18:24:20] 2025-10-04 16:24:20,113 [wrapper] ==== wrapper stdout END ==== [2025-10-04 18:24:20] 2025-10-04 16:24:20,117 [wrapper] ==== wrapper stderr END ==== [2025-10-04 18:24:20] *** Error codes and diagnostics *** [2025-10-04 18:24:20] "exeErrorCode": 0, [2025-10-04 18:24:20] "exeErrorDiag": "", [2025-10-04 18:24:20] "pilotErrorCode": 1305, [2025-10-04 18:24:20] "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGSEGV signal (exit code 139); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc FATAL Caught fatal signal. Printing details to stdout.\"; Possi", [2025-10-04 18:24:20] *** Listing of results directory *** [2025-10-04 18:24:20] total 425276 [2025-10-04 18:24:20] drwx------ 4 boinc boinc 4096 Jul 31 15:00 pilot3 [2025-10-04 18:24:20] -rwx------ 1 boinc boinc 36292 Oct 4 12:03 runpilot2-wrapper.sh [2025-10-04 18:24:20] -rw-r--r-- 1 boinc boinc 5112 Oct 4 12:03 queuedata.json [2025-10-04 18:24:20] -rw-r--r-- 1 boinc boinc 552446 Oct 4 12:03 pilot3.tar.gz [2025-10-04 18:24:20] -rw-r--r-- 1 boinc boinc 100 Oct 4 17:51 wrapper_26015_x86_64-pc-linux-gnu [2025-10-04 18:24:20] -rwxr-xr-x 1 boinc boinc 7986 Oct 4 17:51 run_atlas [2025-10-04 18:24:20] -rw-r--r-- 1 boinc boinc 105 Oct 4 17:51 job.xml [2025-10-04 18:24:20] -rw-r--r-- 3 boinc boinc 215352205 Oct 4 17:51 EVNT.46376901._002033.pool.root.1 [2025-10-04 18:24:20] -rw-r--r-- 3 boinc boinc 215352205 Oct 4 17:51 ATLAS.root_0 [2025-10-04 18:24:20] -rw-r--r-- 2 boinc boinc 565590 Oct 4 17:51 input.tar.gz [2025-10-04 18:24:20] -rw-r--r-- 2 boinc boinc 15120 Oct 4 17:51 start_atlas.sh [2025-10-04 18:24:20] drwxrwx--x 2 boinc boinc 4096 Oct 4 17:51 shared [2025-10-04 18:24:20] -rw-r--r-- 1 boinc boinc 0 Oct 4 17:51 boinc_setup_complete [2025-10-04 18:24:20] -rw-r--r-- 1 boinc boinc 0 Oct 4 17:51 boinc_lockfile [2025-10-04 18:24:20] -rw------- 1 boinc boinc 1560401 Oct 4 17:51 agis_ddmendpoints.agis.ALL.json [2025-10-04 18:24:20] -rw-r--r-- 1 boinc boinc 6380 Oct 4 18:15 init_data.xml [2025-10-04 18:24:20] -rw-r--r-- 1 boinc boinc 2519 Oct 4 18:15 pandaJob.out [2025-10-04 18:24:20] -rw------- 1 boinc boinc 975886 Oct 4 18:15 agis_schedconf.cvmfs.json [2025-10-04 18:24:20] -rw------- 1 boinc boinc 1014 Oct 4 18:21 memory_monitor_summary.json [2025-10-04 18:24:20] -rw------- 1 boinc boinc 315230 Oct 4 18:21 log.46376905._056823.job.log.tgz.1 [2025-10-04 18:24:20] -rw-r--r-- 1 boinc boinc 528 Oct 4 18:21 boinc_task_state.xml [2025-10-04 18:24:20] -rw------- 1 boinc boinc 96 Oct 4 18:23 pilot_heartbeat.json [2025-10-04 18:24:20] -rw------- 1 boinc boinc 9708 Oct 4 18:23 heartbeat.json [2025-10-04 18:24:20] -rw-r--r-- 1 boinc boinc 8192 Oct 4 18:24 boinc_mmap_file [2025-10-04 18:24:20] -rw-r--r-- 1 boinc boinc 26 Oct 4 18:24 wrapper_checkpoint.txt [2025-10-04 18:24:20] -rw------- 1 boinc boinc 4752 Oct 4 18:24 pilotlog.txt [2025-10-04 18:24:20] -rw------- 1 boinc boinc 126519 Oct 4 18:24 log.46376905._056823.job.log.1 [2025-10-04 18:24:20] -rw------- 1 boinc boinc 188 Oct 4 18:24 output.list [2025-10-04 18:24:20] -rw-r--r-- 1 boinc boinc 620 Oct 4 18:24 runtime_log [2025-10-04 18:24:20] -rw------- 1 boinc boinc 460800 Oct 4 18:24 result.tar.gz [2025-10-04 18:24:20] -rw-r--r-- 1 boinc boinc 8731 Oct 4 18:24 runtime_log.err [2025-10-04 18:24:20] -rw------- 1 boinc boinc 781 Oct 4 18:24 LV3LDmuHEP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmFFDMDm8n488n.diag [2025-10-04 18:24:20] -rw-r--r-- 1 boinc boinc 24549 Oct 4 18:24 stderr.txt [2025-10-04 18:24:20] No HITS result produced [2025-10-04 18:24:20] *** Contents of shared directory: *** [2025-10-04 18:24:20] total 211336 [2025-10-04 18:24:20] -rw-r--r-- 3 boinc boinc 215352205 Oct 4 17:51 ATLAS.root_0 [2025-10-04 18:24:20] -rw-r--r-- 2 boinc boinc 565590 Oct 4 17:51 input.tar.gz [2025-10-04 18:24:20] -rw-r--r-- 2 boinc boinc 15120 Oct 4 17:51 start_atlas.sh [2025-10-04 18:24:20] -rw------- 1 boinc boinc 460800 Oct 4 18:24 result.tar.gz 18:24:21 (2193789): run_atlas exited; CPU time 539.275772 18:24:21 (2193789): called boinc_finish(0) </stderr_txt> ]]>
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