Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:53:35 (1638): wrapper (7.7.26015): starting
13:53:35 (1638): wrapper: running run_atlas (--nthreads 8)
[2025-10-06 13:53:35] Arguments: --nthreads 8
[2025-10-06 13:53:35] Threads: 8
[2025-10-06 13:53:35] Checking for CVMFS
[2025-10-06 13:53:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 13:53:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 13:53:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 13:53:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 13:53:38] 2.11.2.0 11231 211852 139768 151397 1 61 23075447 25165825 4632 130560 0 113099986 99.882 61868387 4223 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-06 13:53:38] CVMFS is ok
[2025-10-06 13:53:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 13:53:38] Checking for apptainer binary...
[2025-10-06 13:53:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 13:53:38] Running /usr/bin/apptainer --version
[2025-10-06 13:53:38] apptainer version 1.3.2-1.el7
[2025-10-06 13:53:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 13:53:59] cg-vwn244.simple-grid.lan
[2025-10-06 13:53:59] apptainer works
[2025-10-06 13:53:59] Set ATHENA_PROC_NUMBER=8
[2025-10-06 13:53:59] Set ATHENA_CORE_NUMBER=8
[2025-10-06 13:53:59] Starting ATLAS job with PandaID=6829510528
[2025-10-06 13:53:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 18:01:06]  *** The last 200 lines of the pilot log: ***
[2025-10-06 18:01:06] 2025-10-06 16:00:32,404 | INFO     | fitting pss+swap vs Time
[2025-10-06 18:01:06] 2025-10-06 16:00:32,415 | INFO     | sum of square deviations: 3871990738.0
[2025-10-06 18:01:06] 2025-10-06 16:00:32,418 | INFO     | sum of deviations: 105404006116.5
[2025-10-06 18:01:06] 2025-10-06 16:00:32,418 | INFO     | mean x: 1759759274.5
[2025-10-06 18:01:06] 2025-10-06 16:00:32,418 | INFO     | mean y: 2412338.9267241377
[2025-10-06 18:01:06] 2025-10-06 16:00:32,418 | INFO     | -- intersect: -47902061066.08316
[2025-10-06 18:01:06] 2025-10-06 16:00:32,418 | INFO     | intersect: -47902061066.08316
[2025-10-06 18:01:06] 2025-10-06 16:00:32,419 | INFO     | chi2: 7.506084042832263
[2025-10-06 18:01:06] 2025-10-06 16:00:32,419 | INFO     | sum of square deviations: 3627000098.0
[2025-10-06 18:01:06] 2025-10-06 16:00:32,421 | INFO     | sum of deviations: 118295837829.99998
[2025-10-06 18:01:06] 2025-10-06 16:00:32,421 | INFO     | mean x: 1759759122.0
[2025-10-06 18:01:06] 2025-10-06 16:00:32,421 | INFO     | mean y: 2420197.4273127755
[2025-10-06 18:01:06] 2025-10-06 16:00:32,422 | INFO     | -- intersect: -57392720164.09774
[2025-10-06 18:01:06] 2025-10-06 16:00:32,422 | INFO     | intersect: -57392720164.09774
[2025-10-06 18:01:06] 2025-10-06 16:00:32,422 | INFO     | chi2: 6.795152564097833
[2025-10-06 18:01:06] 2025-10-06 16:00:32,422 | INFO     | current chi2=6.795152564097833 (change=9.471403126818368 %)
[2025-10-06 18:01:06] 2025-10-06 16:00:32,422 | INFO     | right removable region: 226
[2025-10-06 18:01:06] 2025-10-06 16:00:32,423 | INFO     | sum of square deviations: 3627000098.0
[2025-10-06 18:01:06] 2025-10-06 16:00:32,425 | INFO     | sum of deviations: 26974697638.000004
[2025-10-06 18:01:06] 2025-10-06 16:00:32,425 | INFO     | mean x: 1759759427.0
[2025-10-06 18:01:06] 2025-10-06 16:00:32,425 | INFO     | mean y: 2461118.4449339206
[2025-10-06 18:01:06] 2025-10-06 16:00:32,425 | INFO     | -- intersect: -13085208353.943686
[2025-10-06 18:01:06] 2025-10-06 16:00:32,425 | INFO     | intersect: -13085208353.943686
[2025-10-06 18:01:06] 2025-10-06 16:00:32,426 | INFO     | chi2: 2.754644903248769
[2025-10-06 18:01:06] 2025-10-06 16:00:32,426 | INFO     | current chi2=2.754644903248769 (change=63.30117158920909 %)
[2025-10-06 18:01:06] 2025-10-06 16:00:32,436 | INFO     | sum of square deviations: 3392567795.5
[2025-10-06 18:01:06] 2025-10-06 16:00:32,438 | INFO     | sum of deviations: -21382882355.0
[2025-10-06 18:01:06] 2025-10-06 16:00:32,438 | INFO     | mean x: 1759759579.5
[2025-10-06 18:01:06] 2025-10-06 16:00:32,439 | INFO     | mean y: 2492444.7837837837
[2025-10-06 18:01:06] 2025-10-06 16:00:32,439 | INFO     | -- intersect: 11094012004.523932
[2025-10-06 18:01:06] 2025-10-06 16:00:32,439 | INFO     | intersect: 11094012004.523932
[2025-10-06 18:01:06] 2025-10-06 16:00:32,439 | INFO     | chi2: 0.8759006192700568
[2025-10-06 18:01:06] 2025-10-06 16:00:32,439 | INFO     | current chi2=0.8759006192700568 (change=68.20277567402468 %)
[2025-10-06 18:01:06] 2025-10-06 16:00:32,440 | INFO     | sum of square deviations: 3168461268.0
[2025-10-06 18:01:06] 2025-10-06 16:00:32,441 | INFO     | sum of deviations: -28711452062.0
[2025-10-06 18:01:06] 2025-10-06 16:00:32,441 | INFO     | mean x: 1759759732.0
[2025-10-06 18:01:06] 2025-10-06 16:00:32,442 | INFO     | mean y: 2497389.9216589862
[2025-10-06 18:01:06] 2025-10-06 16:00:32,442 | INFO     | -- intersect: 15948804733.564392
[2025-10-06 18:01:06] 2025-10-06 16:00:32,442 | INFO     | intersect: 15948804733.564392
[2025-10-06 18:01:06] 2025-10-06 16:00:32,442 | INFO     | chi2: 0.8053004372625991
[2025-10-06 18:01:06] 2025-10-06 16:00:32,442 | INFO     | current chi2=0.8053004372625991 (change=8.060295934748082 %)
[2025-10-06 18:01:06] 2025-10-06 16:00:32,442 | INFO     | left removable region: 30
[2025-10-06 18:01:06] 2025-10-06 16:00:32,443 | INFO     | sum of square deviations: 2334722845.0
[2025-10-06 18:01:06] 2025-10-06 16:00:32,444 | INFO     | sum of deviations: -11806300479.499996
[2025-10-06 18:01:06] 2025-10-06 16:00:32,445 | INFO     | mean x: 1759760006.5
[2025-10-06 18:01:06] 2025-10-06 16:00:32,445 | INFO     | mean y: 2506278.3316326533
[2025-10-06 18:01:06] 2025-10-06 16:00:32,445 | INFO     | -- intersect: 8901316453.183828
[2025-10-06 18:01:06] 2025-10-06 16:00:32,445 | INFO     | intersect: 8901316453.183828
[2025-10-06 18:01:06] 2025-10-06 16:00:32,445 | INFO     | chi2: 0.014366994030693758
[2025-10-06 18:01:06] 2025-10-06 16:00:32,445 | INFO     | -- intersect: 8901316453.183828
[2025-10-06 18:01:06] 2025-10-06 16:00:32,446 | INFO     | current memory leak: -5.06 B/s (using 196 data points, chi2=0.01)
[2025-10-06 18:01:06] 2025-10-06 16:00:32,446 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-06 18:01:06] 2025-10-06 16:00:32,446 | INFO     | ..............................
[2025-10-06 18:01:06] 2025-10-06 16:00:32,447 | INFO     | . Timing measurements:
[2025-10-06 18:01:06] 2025-10-06 16:00:32,447 | INFO     | . get job = 0 s
[2025-10-06 18:01:06] 2025-10-06 16:00:32,447 | INFO     | . initial setup = 8 s
[2025-10-06 18:01:06] 2025-10-06 16:00:32,447 | INFO     | . payload setup = 99 s
[2025-10-06 18:01:06] 2025-10-06 16:00:32,447 | INFO     | . stage-in = 0 s
[2025-10-06 18:01:06] 2025-10-06 16:00:32,457 | INFO     | . payload execution = 14261 s
[2025-10-06 18:01:06] 2025-10-06 16:00:32,457 | INFO     | . stage-out = 2 s
[2025-10-06 18:01:06] 2025-10-06 16:00:32,458 | INFO     | . log creation = 0 s
[2025-10-06 18:01:06] 2025-10-06 16:00:32,458 | INFO     | ..............................
[2025-10-06 18:01:06] 2025-10-06 16:00:32,621 | INFO     | 
[2025-10-06 18:01:06] 2025-10-06 16:00:32,621 | INFO     | job summary report
[2025-10-06 18:01:06] 2025-10-06 16:00:32,621 | INFO     | --------------------------------------------------
[2025-10-06 18:01:06] 2025-10-06 16:00:32,621 | INFO     | PanDA job id: 6829510528
[2025-10-06 18:01:06] 2025-10-06 16:00:32,621 | INFO     | task id: 46376905
[2025-10-06 18:01:06] 2025-10-06 16:00:32,621 | INFO     | errors: (none)
[2025-10-06 18:01:06] 2025-10-06 16:00:32,621 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 18:01:06] 2025-10-06 16:00:32,622 | INFO     | pilot state: finished 
[2025-10-06 18:01:06] 2025-10-06 16:00:32,624 | INFO     | transexitcode: 0
[2025-10-06 18:01:06] 2025-10-06 16:00:32,624 | INFO     | exeerrorcode: 0
[2025-10-06 18:01:06] 2025-10-06 16:00:32,624 | INFO     | exeerrordiag: 
[2025-10-06 18:01:06] 2025-10-06 16:00:32,625 | INFO     | exitcode: 0
[2025-10-06 18:01:06] 2025-10-06 16:00:32,625 | INFO     | exitmsg: OK
[2025-10-06 18:01:06] 2025-10-06 16:00:32,625 | INFO     | cpuconsumptiontime: 48867 s
[2025-10-06 18:01:06] 2025-10-06 16:00:32,625 | INFO     | nevents: 400
[2025-10-06 18:01:06] 2025-10-06 16:00:32,625 | INFO     | neventsw: 0
[2025-10-06 18:01:06] 2025-10-06 16:00:32,625 | INFO     | pid: 12023
[2025-10-06 18:01:06] 2025-10-06 16:00:32,625 | INFO     | pgrp: 12023
[2025-10-06 18:01:06] 2025-10-06 16:00:32,625 | INFO     | corecount: 8
[2025-10-06 18:01:06] 2025-10-06 16:00:32,625 | INFO     | event service: False
[2025-10-06 18:01:06] 2025-10-06 16:00:32,625 | INFO     | sizes: {0: 2348590, 1: 2348845, 12: 2348845, 23: 2348873, 33: 2348901, 44: 2348957, 55: 2349113, 66: 2349431, 76: 2349431, 14364: 2379591, 14367: 2388591, 14370: 2
[2025-10-06 18:01:06] 2025-10-06 16:00:32,626 | INFO     | --------------------------------------------------
[2025-10-06 18:01:06] 2025-10-06 16:00:32,626 | INFO     | 
[2025-10-06 18:01:06] 2025-10-06 16:00:32,626 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-10-06 18:01:06] 2025-10-06 16:00:32,819 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 18:01:06] 2025-10-06 16:00:32,819 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 18:01:06] 2025-10-06 16:00:32,819 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 18:01:06] 2025-10-06 16:00:32,819 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 18:01:06] 2025-10-06 16:00:32,819 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 18:01:06] 2025-10-06 16:00:32,819 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 18:01:06] 2025-10-06 16:00:32,819 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 18:01:06] 2025-10-06 16:00:32,819 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 18:01:06] 2025-10-06 16:00:32,820 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 18:01:06] 2025-10-06 16:00:32,820 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 18:01:06] 2025-10-06 16:00:32,820 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 18:01:06] 2025-10-06 16:00:32,820 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 18:01:06] 2025-10-06 16:00:32,820 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 18:01:06] 2025-10-06 16:00:32,820 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 18:01:06] 2025-10-06 16:00:32,820 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 18:01:06] 2025-10-06 16:00:32,820 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 18:01:06] 2025-10-06 16:00:32,820 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 18:01:06] 2025-10-06 16:00:32,820 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 18:01:06] 2025-10-06 16:00:32,820 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 18:01:06] 2025-10-06 16:00:32,820 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 18:01:06] 2025-10-06 16:00:32,821 | INFO     | job 6829510528 has completed (purged errors)
[2025-10-06 18:01:06] 2025-10-06 16:00:32,821 | INFO     | overall cleanup function is called
[2025-10-06 18:01:06] 2025-10-06 16:00:33,828 | INFO     | --- collectZombieJob: --- 10, [12023]
[2025-10-06 18:01:06] 2025-10-06 16:00:33,828 | INFO     | zombie collector waiting for pid 12023
[2025-10-06 18:01:06] 2025-10-06 16:00:33,829 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 18:01:06] 2025-10-06 16:00:33,829 | INFO     | collected zombie processes
[2025-10-06 18:01:06] 2025-10-06 16:00:33,829 | INFO     | will attempt to kill all subprocesses of pid=12023
[2025-10-06 18:01:06] 2025-10-06 16:00:33,946 | INFO     | process IDs to be killed: [12023] (in reverse order)
[2025-10-06 18:01:06] 2025-10-06 16:00:34,655 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 18:01:06] 2025-10-06 16:00:34,655 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 18:01:06] 2025-10-06 16:00:34,659 | INFO     | did not find any defunct processes belonging to 12023
[2025-10-06 18:01:06] 2025-10-06 16:00:34,661 | INFO     | did not find any defunct processes belonging to 12023
[2025-10-06 18:01:06] 2025-10-06 16:00:34,661 | INFO     | ready for new job
[2025-10-06 18:01:06] 2025-10-06 16:00:34,662 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 18:01:06] 2025-10-06 16:00:34,664 | INFO     | ***************************************
[2025-10-06 18:01:06] 2025-10-06 16:00:34,664 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 18:01:06] 2025-10-06 16:00:34,664 | INFO     | ***************************************
[2025-10-06 18:01:06] 2025-10-06 16:00:34,664 | INFO     | 
[2025-10-06 18:01:06] 2025-10-06 16:00:34,665 | INFO     | pilot is running in a VM
[2025-10-06 18:01:06] 2025-10-06 16:00:34,665 | INFO     | architecture information:
[2025-10-06 18:01:06] 2025-10-06 16:00:34,674 | INFO     | executing command: cat /etc/os-release
[2025-10-06 18:01:06] 2025-10-06 16:00:34,874 | INFO     | cat /etc/os-release:
[2025-10-06 18:01:06] NAME="CentOS Linux"
[2025-10-06 18:01:06] VERSION="7 (Core)"
[2025-10-06 18:01:06] ID="centos"
[2025-10-06 18:01:06] ID_LIKE="rhel fedora"
[2025-10-06 18:01:06] VERSION_ID="7"
[2025-10-06 18:01:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 18:01:06] ANSI_COLOR="0;31"
[2025-10-06 18:01:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 18:01:06] HOME_URL="https://www.centos.org/"
[2025-10-06 18:01:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 18:01:06] 
[2025-10-06 18:01:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 18:01:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 18:01:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 18:01:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 18:01:06] 
[2025-10-06 18:01:06] 2025-10-06 16:00:34,874 | INFO     | ***************************************
[2025-10-06 18:01:06] 2025-10-06 16:00:35,378 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-10-06 18:01:06] 2025-10-06 16:00:35,566 | INFO     | sufficient remaining disk space (495620980736 B)
[2025-10-06 18:01:06] 2025-10-06 16:00:35,566 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 18:01:06] 2025-10-06 16:00:35,566 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 18:01:06] 2025-10-06 16:00:35,567 | INFO     | update_server=False
[2025-10-06 18:01:06] 2025-10-06 16:00:35,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 18:01:06] 2025-10-06 16:00:35,782 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 18:01:06] 2025-10-06 16:00:35,783 | INFO     | aborting loop
[2025-10-06 18:01:06] 2025-10-06 16:00:35,919 | INFO     | all data control threads have been joined
[2025-10-06 18:01:06] 2025-10-06 16:00:35,926 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 18:01:06] 2025-10-06 16:00:36,031 | INFO     | all payload control threads have been joined
[2025-10-06 18:01:06] 2025-10-06 16:00:36,556 | INFO     | all job control threads have been joined
[2025-10-06 18:01:06] 2025-10-06 16:00:36,572 | INFO     | [job] retrieve thread has finished
[2025-10-06 18:01:06] 2025-10-06 16:00:36,650 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 18:01:06] 2025-10-06 16:00:36,682 | INFO     | [data] copytool_in thread has finished
[2025-10-06 18:01:06] 2025-10-06 16:00:36,745 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 18:01:06] 2025-10-06 16:00:36,787 | INFO     | [job] job monitor thread has finished
[2025-10-06 18:01:06] 2025-10-06 16:00:36,925 | INFO     | [data] control thread has finished
[2025-10-06 18:01:06] 2025-10-06 16:00:37,036 | INFO     | [payload] control thread has finished
[2025-10-06 18:01:06] 2025-10-06 16:00:37,274 | INFO     | [payload] validate_post thread has finished
[2025-10-06 18:01:06] 2025-10-06 16:00:37,301 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 18:01:06] 2025-10-06 16:00:37,560 | INFO     | [job] validate thread has finished
[2025-10-06 18:01:06] 2025-10-06 16:00:37,562 | INFO     | [job] control thread has finished
[2025-10-06 18:01:06] 2025-10-06 16:00:37,630 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 18:01:06] 2025-10-06 16:00:37,682 | INFO     | [payload] failed_post thread has finished
[2025-10-06 18:01:06] 2025-10-06 16:00:37,733 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 18:01:06] 2025-10-06 16:00:37,937 | INFO     | [data] copytool_out thread has finished
[2025-10-06 18:01:06] 2025-10-06 16:00:38,635 | INFO     | [job] queue monitor thread has finished
[2025-10-06 18:01:06] 2025-10-06 16:00:39,414 | INFO     | [monitor] cgroup control has ended
[2025-10-06 18:01:06] 2025-10-06 16:00:41,744 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 18:01:06] 2025-10-06 16:00:45,631 | INFO     | job.realtimelogging is not enabled
[2025-10-06 18:01:06] 2025-10-06 16:00:46,636 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 18:01:06] 2025-10-06 16:00:48,183 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140034903848768)>', '<ExcThread(monitor, started 140034606864128)>']
[2025-10-06 18:01:06] 2025-10-06 16:00:53,210 | INFO     | all workflow threads have been joined
[2025-10-06 18:01:06] 2025-10-06 16:00:53,210 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 18:01:06] 2025-10-06 16:00:53,211 | INFO     | traces error code: 0
[2025-10-06 18:01:06] 2025-10-06 16:00:53,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 18:01:06] 2025-10-06 16:01:04,504 | INFO     | PID=5433 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-06 18:01:06] 2025-10-06 16:01:04,504 | INFO     | .. there are 9 such processes running
[2025-10-06 18:01:06] 2025-10-06 16:01:04,506 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 18:01:06] 2025-10-06 16:01:04,506 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 18:01:06] 2025-10-06 16:01:04,506 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 18:01:06] 2025-10-06 16:01:04,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 18:01:06] 2025-10-06 16:01:04,506 | CRITICAL | thread 'MainThread' is not alive
[2025-10-06 18:01:06] 2025-10-06 16:01:04,506 | INFO     | [monitor] control thread has ended
[2025-10-06 18:01:06] 2025-10-06 16:01:04,840 [wrapper] ==== pilot stdout END ====
[2025-10-06 18:01:06] 2025-10-06 16:01:04,866 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 18:01:06] 2025-10-06 16:01:04,895 [wrapper] pilotpid: 5433
[2025-10-06 18:01:06] 2025-10-06 16:01:04,925 [wrapper] Pilot exit status: 0
[2025-10-06 18:01:06] 2025-10-06 16:01:05,033 [wrapper] pandaids: 6829510528
[2025-10-06 18:01:06] 2025-10-06 16:01:05,277 [wrapper] cleanup supervisor_pilot 19452 5434
[2025-10-06 18:01:06] 2025-10-06 16:01:05,318 [wrapper] Test setup, not cleaning
[2025-10-06 18:01:06] 2025-10-06 16:01:05,339 [wrapper] apfmon messages muted
[2025-10-06 18:01:06] 2025-10-06 16:01:05,365 [wrapper] ==== wrapper stdout END ====
[2025-10-06 18:01:06] 2025-10-06 16:01:05,398 [wrapper] ==== wrapper stderr END ====
[2025-10-06 18:01:06]  *** Error codes and diagnostics ***
[2025-10-06 18:01:06]     "exeErrorCode": 0,
[2025-10-06 18:01:06]     "exeErrorDiag": "",
[2025-10-06 18:01:06]     "pilotErrorCode": 0,
[2025-10-06 18:01:06]     "pilotErrorDiag": "",
[2025-10-06 18:01:06]  *** Listing of results directory ***
[2025-10-06 18:01:06] total 392156
[2025-10-06 18:01:06] -rw-r--r--. 1 boinc boinc    552446 Oct  4 10:30 pilot3.tar.gz
[2025-10-06 18:01:06] -rw-r--r--. 1 boinc boinc      5112 Oct  4 10:56 queuedata.json
[2025-10-06 18:01:06] -rwx------. 1 boinc boinc     36292 Oct  4 10:57 runpilot2-wrapper.sh
[2025-10-06 18:01:06] -rw-r--r--. 1 boinc boinc       100 Oct  6 13:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 18:01:06] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 13:53 run_atlas
[2025-10-06 18:01:06] -rw-r--r--. 1 boinc boinc       105 Oct  6 13:53 job.xml
[2025-10-06 18:01:06] -rw-r--r--. 2 boinc boinc 214437207 Oct  6 13:53 EVNT.46376901._002000.pool.root.1
[2025-10-06 18:01:06] -rw-r--r--. 2 boinc boinc     15120 Oct  6 13:53 start_atlas.sh
[2025-10-06 18:01:06] drwxrwx--x. 2 boinc boinc        68 Oct  6 13:53 shared
[2025-10-06 18:01:06] -rw-r--r--. 2 boinc boinc    565599 Oct  6 13:53 input.tar.gz
[2025-10-06 18:01:06] -rw-r--r--. 1 boinc boinc         0 Oct  6 13:53 boinc_lockfile
[2025-10-06 18:01:06] -rw-r--r--. 1 boinc boinc      6390 Oct  6 13:53 init_data.xml
[2025-10-06 18:01:06] -rw-r--r--. 1 boinc boinc      2519 Oct  6 13:53 pandaJob.out
[2025-10-06 18:01:06] -rw-------. 1 boinc boinc    975011 Oct  6 13:57 agis_schedconf.cvmfs.json
[2025-10-06 18:01:06] drwx------. 4 boinc boinc      4096 Oct  6 13:57 pilot3
[2025-10-06 18:01:06] -rw-------. 1 boinc boinc 178408765 Oct  6 17:57 HITS.46376905._055998.pool.root.1
[2025-10-06 18:01:06] -rw-r--r--. 1 boinc boinc       530 Oct  6 17:58 boinc_task_state.xml
[2025-10-06 18:01:06] -rw-------. 1 boinc boinc      1019 Oct  6 17:59 memory_monitor_summary.json
[2025-10-06 18:01:06] -rw-------. 1 boinc boinc   1560401 Oct  6 17:59 agis_ddmendpoints.agis.ALL.json
[2025-10-06 18:01:06] -rw-------. 1 boinc boinc    471400 Oct  6 17:59 log.46376905._055998.job.log.tgz.1
[2025-10-06 18:01:06] -rw-------. 1 boinc boinc      7786 Oct  6 18:00 heartbeat.json
[2025-10-06 18:01:06] -rw-r--r--. 1 boinc boinc        28 Oct  6 18:00 wrapper_checkpoint.txt
[2025-10-06 18:01:06] -rw-r--r--. 1 boinc boinc      8192 Oct  6 18:00 boinc_mmap_file
[2025-10-06 18:01:06] -rw-------. 1 boinc boinc        95 Oct  6 18:01 pilot_heartbeat.json
[2025-10-06 18:01:06] -rw-------. 1 boinc boinc       889 Oct  6 18:01 pilotlog.txt
[2025-10-06 18:01:06] -rw-------. 1 boinc boinc   1952423 Oct  6 18:01 log.46376905._055998.job.log.1
[2025-10-06 18:01:06] -rw-------. 1 boinc boinc       357 Oct  6 18:01 output.list
[2025-10-06 18:01:06] -rw-r--r--. 1 boinc boinc       620 Oct  6 18:01 runtime_log
[2025-10-06 18:01:06] -rw-------. 1 boinc boinc   2447360 Oct  6 18:01 result.tar.gz
[2025-10-06 18:01:06] -rw-r--r--. 1 boinc boinc      8717 Oct  6 18:01 runtime_log.err
[2025-10-06 18:01:06] -rw-------. 1 boinc boinc       657 Oct  6 18:01 0tfMDmcGDP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0mKNDm75yfHn.diag
[2025-10-06 18:01:06] -rw-r--r--. 1 boinc boinc     20594 Oct  6 18:01 stderr.txt
[2025-10-06 18:01:06] HITS file was successfully produced:
[2025-10-06 18:01:06] -rw-------. 1 boinc boinc 178408765 Oct  6 17:57 shared/HITS.pool.root.1
[2025-10-06 18:01:06]  *** Contents of shared directory: ***
[2025-10-06 18:01:06] total 386604
[2025-10-06 18:01:06] -rw-r--r--. 2 boinc boinc 214437207 Oct  6 13:53 ATLAS.root_0
[2025-10-06 18:01:06] -rw-r--r--. 2 boinc boinc     15120 Oct  6 13:53 start_atlas.sh
[2025-10-06 18:01:06] -rw-r--r--. 2 boinc boinc    565599 Oct  6 13:53 input.tar.gz
[2025-10-06 18:01:06] -rw-------. 1 boinc boinc 178408765 Oct  6 17:57 HITS.pool.root.1
[2025-10-06 18:01:06] -rw-------. 1 boinc boinc   2447360 Oct  6 18:01 result.tar.gz
18:01:07 (1638): run_atlas exited; CPU time 49069.811121
18:01:07 (1638): called boinc_finish(0)

</stderr_txt>
]]>

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