Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-05 16:46:47 (51503): vboxwrapper version 26210
2025-10-05 16:46:47 (51503): BOINC client version: 8.2.5
2025-10-05 16:46:48 (51503): Detected: VirtualBox VboxManage Interface (Version: 7.2.0)
2025-10-05 16:46:48 (51503): Detected: Sandbox Configuration Enabled
2025-10-05 16:46:48 (51503): Successfully copied 'init_data.xml' to the shared directory.
2025-10-05 16:46:48 (51503): Create VM. (boinc_46513ad4e3c48874, slot#0)
2025-10-05 16:46:48 (51503): Setting Memory Size for VM. (4200MB)
2025-10-05 16:46:48 (51503): Setting CPU Count for VM. (2)
2025-10-05 16:46:48 (51503): Setting Chipset Options for VM.
2025-10-05 16:46:48 (51503): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-05 16:46:48 (51503): Setting Boot Options for VM.
2025-10-05 16:46:48 (51503): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-05 16:46:48 (51503): Enabling VM Network Access.
2025-10-05 16:46:48 (51503): Disabling USB Support for VM.
2025-10-05 16:46:48 (51503): Disabling COM Port Support for VM.
2025-10-05 16:46:49 (51503): Disabling Audio Support for VM.
2025-10-05 16:46:49 (51503): Disabling Clipboard Support for VM.
2025-10-05 16:46:49 (51503): Disabling Drag and Drop Support for VM.
2025-10-05 16:46:49 (51503): Adding storage controller(s) to VM.
2025-10-05 16:46:49 (51503): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-05 16:46:49 (51503): Adding VirtualBox Guest Additions to VM.
2025-10-05 16:46:49 (51503): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-05 16:46:49 (51503): forwarding host port 50488 to guest port 80
2025-10-05 16:46:49 (51503): Enabling remote desktop for VM.
2025-10-05 16:46:49 (51503): Required extension pack not installed, remote desktop not enabled.
2025-10-05 16:46:49 (51503): Enabling shared directory for VM.
2025-10-05 16:46:50 (51503): Starting VM using VBoxManage interface. (boinc_46513ad4e3c48874, slot#0)
2025-10-05 16:46:55 (51503): Successfully started VM. (PID = '51576')
2025-10-05 16:46:55 (51503): Reporting VM Process ID to BOINC.
2025-10-05 16:46:55 (51503): Guest Log: BIOS: VirtualBox 7.2.0
2025-10-05 16:46:55 (51503): Guest Log: CPUID EDX: 0x178bfbff
2025-10-05 16:46:55 (51503): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-05 16:46:55 (51503): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-05 16:46:55 (51503): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-05 16:46:55 (51503): Detected: Web Application Enabled (http://localhost:50488)
2025-10-05 16:46:55 (51503): Preference change detected
2025-10-05 16:46:55 (51503): Setting CPU throttle for VM. (100%)
2025-10-05 16:46:55 (51503): Setting network throttle for VM. (500KB)
2025-10-05 16:46:55 (51503): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-05 16:46:57 (51503): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-05 16:46:57 (51503): Guest Log: BIOS: Booting from Hard Disk...
2025-10-05 16:47:00 (51503): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-05 16:47:00 (51503): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-05 16:47:00 (51503): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-05 16:47:06 (51503): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-05 16:47:06 (51503): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-05 16:47:17 (51503): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-05 16:47:17 (51503): Guest Log: 00:00:00.000318 main     Log opened 2025-10-05T08:47:15.637151000Z
2025-10-05 16:47:17 (51503): Guest Log: 00:00:00.000439 main     OS Product: Linux
2025-10-05 16:47:17 (51503): Guest Log: 00:00:00.000480 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-05 16:47:17 (51503): Guest Log: 00:00:00.000515 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-05 16:47:17 (51503): Guest Log: 00:00:00.000552 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-05 16:47:17 (51503): Guest Log: 00:00:00.000553 main     Process ID: 1268
2025-10-05 16:47:17 (51503): Guest Log: 00:00:00.000553 main     Package type: LINUX_64BITS_GENERIC
2025-10-05 16:47:17 (51503): Guest Log: 00:00:00.002676 main     5.2.32 r132073 started. Verbose level = 0
2025-10-05 16:47:17 (51503): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-05 16:47:17 (51503): Guest Log: [INFO] Mounting shared directory
2025-10-05 16:47:17 (51503): Guest Log: [INFO] Checking for init_data.xml
2025-10-05 16:49:30 (51503): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-05 16:49:30 (51503): Guest Log: [INFO] Detected branch: prod
2025-10-05 16:49:32 (51503): VM state change detected. (old = 'running', new = 'paused')
2025-10-05 16:49:52 (51503): VM state change detected. (old = 'paused', new = 'running')
2025-10-05 16:49:55 (51503): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-05 16:49:55 (51503): Guest Log: Copying input files
2025-10-05 16:49:58 (51503): Guest Log: Copied input files into RunAtlas.
2025-10-05 16:49:58 (51503): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-05 16:49:58 (51503): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-05 16:49:58 (51503): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-05 16:49:58 (51503): Guest Log: Further information can be found at the LHC@home message board.
2025-10-05 16:51:34 (51503): VM state change detected. (old = 'running', new = 'paused')
2025-10-05 16:51:54 (51503): VM state change detected. (old = 'paused', new = 'running')
2025-10-05 16:52:28 (51503): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-05 16:52:35 (51503): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-05 16:52:35 (51503): Guest Log: 2.6.3.0 1578 3 30148 151356 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-05 16:52:36 (51503): Guest Log: copied the webapp to /var/www
2025-10-05 16:52:36 (51503): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-05 16:52:36 (51503): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-05 16:52:42 (51503): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-05 16:52:42 (51503): Guest Log:  *** Starting ATLAS job. (PandaID=6829511260 taskID=46376905) ***
2025-10-05 17:49:36 (51503): VM state change detected. (old = 'running', new = 'paused')
2025-10-05 22:01:22 (51503): Preference change detected
2025-10-05 22:01:22 (51503): Setting CPU throttle for VM. (100%)
2025-10-05 22:01:22 (51503): Setting network throttle for VM. (500KB)
2025-10-05 22:01:22 (51503): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-05 22:01:23 (51503): VM state change detected. (old = 'paused', new = 'running')
2025-10-05 22:01:32 (51503): Guest Log: 01:01:43.506544 timesync vgsvcTimeSyncWorker: Radical host time change: 15 107 289 000 000ns (HostNow=1 759 672 850 020 000 000 ns HostLast=1 759 657 742 731 000 000 ns)
2025-10-05 22:01:42 (51503): Guest Log: 01:01:53.523071 timesync vgsvcTimeSyncWorker: Radical guest time change: 15 120 904 809 000ns (GuestNow=1 759 672 860 042 187 000 ns GuestLast=1 759 657 739 137 378 000 ns fSetTimeLastLoop=true )
2025-10-05 22:38:58 (51503): Status Report: Elapsed Time: '6000.000000'
2025-10-05 22:38:58 (51503): Status Report: CPU Time: '8781.270000'
2025-10-05 23:55:59 (51503): Guest Log:  *** Job finished ***
2025-10-05 23:55:59 (51503): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:54:51,774 | INFO     | all workflow threads have been joined
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:54:51,774 | INFO     | end of generic workflow (traces error code: 0)
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:54:51,775 | INFO     | traces error code: 0
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:54:51,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:55:06,612 | INFO     | PID=6085 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:55:06,613 | INFO     | found 0 job(s) in 20 queues
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:55:06,613 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:55:06,614 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:55:06,614 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:55:06,614 | INFO     | [monitor] control thread has ended
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:55:06,682 [wrapper] ==== pilot stdout END ====
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:55:06,688 [wrapper] ==== wrapper stdout RESUME ====
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:55:06,693 [wrapper] pilotpid: 6085
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:55:06,698 [wrapper] Pilot exit status: 0
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:55:07,028 [wrapper] pandaids: 6829511260
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:55:07,065 [wrapper] cleanup supervisor_pilot  7947 6086
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:55:07,071 [wrapper] Test setup, not cleaning
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:55:07,077 [wrapper] apfmon messages muted
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:55:07,083 [wrapper] ==== wrapper stdout END ====
2025-10-05 23:55:59 (51503): Guest Log: 2025-10-05 15:55:07,089 [wrapper] ==== wrapper stderr END ====
2025-10-05 23:55:59 (51503): Guest Log:  *** Error codes and diagnostics ***
2025-10-05 23:55:59 (51503): Guest Log:     "exeErrorCode": 0,
2025-10-05 23:55:59 (51503): Guest Log:     "exeErrorDiag": "",
2025-10-05 23:55:59 (51503): Guest Log:     "pilotErrorCode": 0,
2025-10-05 23:55:59 (51503): Guest Log:     "pilotErrorDiag": "",
2025-10-05 23:55:59 (51503): Guest Log:  *** Listing of results directory ***
2025-10-05 23:55:59 (51503): Guest Log: total 180756
2025-10-05 23:55:59 (51503): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  4 09:01 pilot3.tar.gz
2025-10-05 23:55:59 (51503): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  4 09:01 queuedata.json
2025-10-05 23:55:59 (51503): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  4 09:02 runpilot2-wrapper.sh
2025-10-05 23:55:59 (51503): Guest Log: -rw-r-----. 1 atlas atlas     15120 Oct  5 08:49 start_atlas.sh
2025-10-05 23:55:59 (51503): Guest Log: -rw-r-----. 1 atlas atlas    565597 Oct  5 08:49 input.tar.gz
2025-10-05 23:55:59 (51503): Guest Log: -rw-r--r--. 1 atlas atlas      7494 Oct  5 08:49 init_data.xml
2025-10-05 23:55:59 (51503): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  5 08:49 EVNT.46376901._002005.pool.root.1 -> /data/./ATLAS.root_0
2025-10-05 23:55:59 (51503): Guest Log: -rw-r--r--. 1 atlas atlas      2518 Oct  5 08:52 pandaJob.out
2025-10-05 23:55:59 (51503): Guest Log: -rw-------. 1 atlas atlas    973982 Oct  5 08:59 agis_schedconf.cvmfs.json
2025-10-05 23:55:59 (51503): Guest Log: drwx------. 4 atlas atlas      4096 Oct  5 08:59 pilot3
2025-10-05 23:55:59 (51503): Guest Log: -rw-------. 1 atlas atlas 178136391 Oct  5 15:52 HITS.46376905._056124.pool.root.1
2025-10-05 23:55:59 (51503): Guest Log: -rw-------. 1 atlas atlas      1031 Oct  5 15:52 memory_monitor_summary.json
2025-10-05 23:55:59 (51503): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  5 15:52 agis_ddmendpoints.agis.ALL.json
2025-10-05 23:55:59 (51503): Guest Log: -rw-------. 1 atlas atlas    309572 Oct  5 15:53 log.46376905._056124.job.log.tgz.1
2025-10-05 23:55:59 (51503): Guest Log: -rw-------. 1 atlas atlas      7834 Oct  5 15:54 heartbeat.json
2025-10-05 23:55:59 (51503): Guest Log: -rw-------. 1 atlas atlas        98 Oct  5 15:55 pilot_heartbeat.json
2025-10-05 23:55:59 (51503): Guest Log: -rw-------. 1 atlas atlas       744 Oct  5 15:55 pilotlog.txt
2025-10-05 23:55:59 (51503): Guest Log: -rw-------. 1 atlas atlas   1264026 Oct  5 15:55 log.46376905._056124.job.log.1
2025-10-05 23:55:59 (51503): Guest Log: -rw-------. 1 atlas atlas       357 Oct  5 15:55 output.list
2025-10-05 23:55:59 (51503): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  5 15:55 runtime_log
2025-10-05 23:55:59 (51503): Guest Log: -rw-------. 1 atlas atlas   1597440 Oct  5 15:55 result.tar.gz
2025-10-05 23:55:59 (51503): Guest Log: -rw-r--r--. 1 atlas atlas      8718 Oct  5 15:55 runtime_log.err
2025-10-05 23:55:59 (51503): Guest Log: -rw-------. 1 atlas atlas       682 Oct  5 15:55 CMeKDmmKDP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmynKNDm5yEgDo.diag
2025-10-05 23:55:59 (51503): Guest Log: Looking for outputfile HITS.46376905._056124.pool.root.1
2025-10-05 23:55:59 (51503): Guest Log: HITS file was successfully produced
2025-10-05 23:55:59 (51503): Guest Log: -rw-------. 1 atlas atlas 178136391 Oct  5 15:52 /home/atlas/RunAtlas/HITS.46376905._056124.pool.root.1
2025-10-05 23:55:59 (51503): Guest Log: Successfully finished the ATLAS job!
2025-10-05 23:55:59 (51503): Guest Log: Copying the results back to the shared directory!
2025-10-05 23:55:59 (51503): Guest Log:  *** Contents of shared directory: ***
2025-10-05 23:55:59 (51503): Guest Log: total 213012
2025-10-05 23:55:59 (51503): Guest Log: -rw-rw----. 1 root root 215930743 Oct  5 08:46 ATLAS.root_0
2025-10-05 23:55:59 (51503): Guest Log: -rw-rw-r--. 1 root root      7494 Oct  5 08:46 init_data.xml
2025-10-05 23:55:59 (51503): Guest Log: -rw-rw----. 1 root root    565597 Oct  5 08:46 input.tar.gz
2025-10-05 23:55:59 (51503): Guest Log: -rw-r--r--. 1 root root   1597440 Oct  5  2025 result.tar.gz
2025-10-05 23:55:59 (51503): Guest Log: -rw-rw----. 1 root root     15120 Oct  5 08:46 start_atlas.sh
2025-10-05 23:55:59 (51503): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-05 23:55:59 (51503): VM Completion File Detected.
2025-10-05 23:55:59 (51503): Powering off VM.
2025-10-05 23:55:59 (51503): Successfully stopped VM.
2025-10-05 23:55:59 (51503): Deregistering VM. (boinc_46513ad4e3c48874, slot#0)
2025-10-05 23:55:59 (51503): Removing network bandwidth throttle group from VM.
2025-10-05 23:55:59 (51503): Removing VM from VirtualBox.
2025-10-05 23:56:04 (51503): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN