Name jp2LDml0EP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmzKDMDmEkReDn_0
Workunit 235431984
Created 4 Oct 2025, 10:50:16 UTC
Sent 4 Oct 2025, 12:27:48 UTC
Report deadline 12 Oct 2025, 12:27:48 UTC
Received 4 Oct 2025, 13:23:07 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 10858854
Run time 4 min 30 sec
CPU time 23 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 54.65 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 455.98 MB
Peak swap size 1.55 GB
Peak disk usage 413.51 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:51:47 (605607): wrapper (7.7.26015): starting
05:51:47 (605607): wrapper: running run_atlas (--nthreads 12)
[2025-10-04 05:51:47] Arguments: --nthreads 12
[2025-10-04 05:51:47] Threads: 12
[2025-10-04 05:51:47] Checking for CVMFS
[2025-10-04 05:51:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-04 05:51:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-04 05:51:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-04 05:51:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-04 05:51:47] 2.11.5.0 2589 19998 152240 151328 3 271 36681352 45568000 19822 130560 0 176786097 99.813 101827508 18634 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-04 05:51:47] CVMFS is ok
[2025-10-04 05:51:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-04 05:51:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-04 05:51:47] Further information can be found at the LHC@home message board.
[2025-10-04 05:51:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-04 05:51:47] Checking for apptainer binary...
[2025-10-04 05:51:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-04 05:51:47] Running /usr/bin/apptainer --version
[2025-10-04 05:51:47] apptainer version 1.4.1-1.el9
[2025-10-04 05:51:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-04 05:51:48] wns0055.triumf.lcg
[2025-10-04 05:51:48] apptainer works
[2025-10-04 05:51:48] Set ATHENA_PROC_NUMBER=12
[2025-10-04 05:51:48] Set ATHENA_CORE_NUMBER=12
[2025-10-04 05:51:48] Starting ATLAS job with PandaID=6829515471
[2025-10-04 05:51:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-04 05:56:12]  *** The last 200 lines of the pilot log: ***
[2025-10-04 05:56:13] 2025-10-04 12:55:30,863 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-04 05:56:13] 2025-10-04 12:55:30,864 | WARNING  | found no stored workdir sizes
[2025-10-04 05:56:13] 2025-10-04 12:55:30,864 | INFO     | will not add max space = 0 B to job metrics
[2025-10-04 05:56:13] 2025-10-04 12:55:30,864 | WARNING  | wrong length of table data, x=[1759582379.0], y=[978.0] (must be same and length>=4)
[2025-10-04 05:56:13] 2025-10-04 12:55:30,864 | INFO     | could have reported an average CPU frequency of 2753 MHz (4 samples)
[2025-10-04 05:56:13] 2025-10-04 12:55:30,864 | INFO     | ..............................
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . Timing measurements:
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . get job = 0 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . initial setup = 3 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . payload setup = 10 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . stage-in = 0 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . payload execution = 29 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . stage-out = 0 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . log creation = 0 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | ..............................
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6829515471/pilotlog.txt
[2025-10-04 05:56:13] 2025-10-04 12:55:30,879 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-04 05:56:13] - Log from pilotlog.txt -
[2025-10-04 05:56:13] 2025-10-04 12:55:30,863 | INFO     | extracted standard memory fields from prmon json
[2025-10-04 05:56:13] 2025-10-04 12:55:30,863 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-04 05:56:13] 2025-10-04 12:55:30,863 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-04 05:56:13] 2025-10-04 12:55:30,863 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-04 05:56:13] 2025-10-04 12:55:30,864 | WARNING  | found no stored workdir sizes
[2025-10-04 05:56:13] 2025-10-04 12:55:30,864 | INFO     | will not add max space = 0 B to job metrics
[2025-10-04 05:56:13] 2025-10-04 12:55:30,864 | WARNING  | wrong length of table data, x=[1759582379.0], y=[978.0] (must be same and length>=4)
[2025-10-04 05:56:13] 2025-10-04 12:55:30,864 | INFO     | could have reported an average CPU frequency of 2753 MHz (4 samples)
[2025-10-04 05:56:13] 2025-10-04 12:55:30,864 | INFO     | ..............................
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . Timing measurements:
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . get job = 0 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . initial setup = 3 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . payload setup = 10 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . stage-in = 0 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . payload execution = 29 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . stage-out = 0 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . log creation = 0 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | ..............................
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6829515471/pilotlog.txt
[2025-10-04 05:56:13] 2025-10-04 12:55:30,880 | WARNING  | 
[2025-10-04 05:56:13] [begin log extracts]
[2025-10-04 05:56:13] - Log from pilotlog.txt -
[2025-10-04 05:56:13] 2025-10-04 12:55:30,863 | INFO     | extracted standard memory fields from prmon json
[2025-10-04 05:56:13] 2025-10-04 12:55:30,863 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-04 05:56:13] 2025-10-04 12:55:30,863 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-04 05:56:13] 2025-10-04 12:55:30,863 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-04 05:56:13] 2025-10-04 12:55:30,864 | WARNING  | found no stored workdir sizes
[2025-10-04 05:56:13] 2025-10-04 12:55:30,864 | INFO     | will not add max space = 0 B to job metrics
[2025-10-04 05:56:13] 2025-10-04 12:55:30,864 | WARNING  | wrong length of table data, x=[1759582379.0], y=[978.0] (must be same and length>=4)
[2025-10-04 05:56:13] 2025-10-04 12:55:30,864 | INFO     | could have reported an average CPU frequency of 2753 MHz (4 samples)
[2025-10-04 05:56:13] 2025-10-04 12:55:30,864 | INFO     | ..............................
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . Timing measurements:
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . get job = 0 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . initial setup = 3 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . payload setup = 10 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . stage-in = 0 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . payload execution = 29 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . stage-out = 0 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | . log creation = 0 s
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | ..............................
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-04 05:56:13] 2025-10-04 12:55:30,865 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6829515471/pilotlog.txt
[2025-10-04 05:56:13] [end log extracts]
[2025-10-04 05:56:13] 2025-10-04 12:55:30,880 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-04 05:56:13] 2025-10-04 12:55:30,881 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-04 05:56:13] 2025-10-04 12:55:31,342 | INFO     | 
[2025-10-04 05:56:13] 2025-10-04 12:55:31,342 | INFO     | job summary report
[2025-10-04 05:56:13] 2025-10-04 12:55:31,342 | INFO     | --------------------------------------------------
[2025-10-04 05:56:13] 2025-10-04 12:55:31,342 | INFO     | PanDA job id: 6829515471
[2025-10-04 05:56:13] 2025-10-04 12:55:31,342 | INFO     | task id: 46376905
[2025-10-04 05:56:13] 2025-10-04 12:55:31,343 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-04 05:53:11,981 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-04 05:56:13] 2025-10-04 12:55:31,343 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-04 05:56:13] 2025-10-04 12:55:31,343 | INFO     | pilot state: failed 
[2025-10-04 05:56:13] 2025-10-04 12:55:31,343 | INFO     | transexitcode: 65
[2025-10-04 05:56:13] 2025-10-04 12:55:31,343 | INFO     | exeerrorcode: 65
[2025-10-04 05:56:13] 2025-10-04 12:55:31,343 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-04 05:56:13] 2025-10-04 12:55:31,343 | INFO     | exitcode: 65
[2025-10-04 05:56:13] 2025-10-04 12:55:31,343 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-04 05:56:13] 2025-10-04 12:55:31,343 | INFO     | cpuconsumptiontime: 16 s
[2025-10-04 05:56:13] 2025-10-04 12:55:31,343 | INFO     | nevents: 0
[2025-10-04 05:56:13] 2025-10-04 12:55:31,343 | INFO     | neventsw: 0
[2025-10-04 05:56:13] 2025-10-04 12:55:31,343 | INFO     | pid: 615915
[2025-10-04 05:56:13] 2025-10-04 12:55:31,343 | INFO     | pgrp: 615915
[2025-10-04 05:56:13] 2025-10-04 12:55:31,343 | INFO     | corecount: 12
[2025-10-04 05:56:13] 2025-10-04 12:55:31,343 | INFO     | event service: False
[2025-10-04 05:56:13] 2025-10-04 12:55:31,343 | INFO     | sizes: {0: 2348586, 1: 2348841, 12: 2348841, 14: 2349131, 22: 2349159, 44: 2372511, 45: 2376803, 48: 2376831, 174: 2376997}
[2025-10-04 05:56:13] 2025-10-04 12:55:31,343 | INFO     | --------------------------------------------------
[2025-10-04 05:56:13] 2025-10-04 12:55:31,343 | INFO     | 
[2025-10-04 05:56:13] 2025-10-04 12:55:31,344 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-04 05:56:13] 2025-10-04 12:55:31,405 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-04 05:56:13] 2025-10-04 12:55:31,406 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-04 05:56:13] 2025-10-04 12:55:31,406 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-04 05:56:13] 2025-10-04 12:55:31,406 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-04 05:56:13] 2025-10-04 12:55:31,406 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-04 05:56:13] 2025-10-04 12:55:31,406 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-04 05:56:13] 2025-10-04 12:55:31,406 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-04 05:56:13] 2025-10-04 12:55:31,406 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-04 05:56:13] 2025-10-04 12:55:31,406 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-04 05:56:13] 2025-10-04 12:55:31,406 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-04 05:56:13] 2025-10-04 12:55:31,406 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-04 05:56:13] 2025-10-04 12:55:31,406 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-04 05:56:13] 2025-10-04 12:55:31,406 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-04 05:56:13] 2025-10-04 12:55:31,406 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-04 05:56:13] 2025-10-04 12:55:31,406 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-04 05:56:13] 2025-10-04 12:55:31,406 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-04 05:56:13] 2025-10-04 12:55:31,407 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-04 05:56:13] 2025-10-04 12:55:31,407 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-04 05:56:13] 2025-10-04 12:55:31,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-04 05:56:13] 2025-10-04 12:55:31,407 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-04 05:56:13] 2025-10-04 12:55:31,407 | INFO     | job 6829515471 has completed (purged errors)
[2025-10-04 05:56:13] 2025-10-04 12:55:31,407 | INFO     | overall cleanup function is called
[2025-10-04 05:56:13] 2025-10-04 12:55:32,413 | INFO     | --- collectZombieJob: --- 10, [615915]
[2025-10-04 05:56:13] 2025-10-04 12:55:32,413 | INFO     | zombie collector waiting for pid 615915
[2025-10-04 05:56:13] 2025-10-04 12:55:32,413 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-04 05:56:13] 2025-10-04 12:55:32,413 | INFO     | collected zombie processes
[2025-10-04 05:56:13] 2025-10-04 12:55:32,414 | INFO     | will attempt to kill all subprocesses of pid=615915
[2025-10-04 05:56:13] 2025-10-04 12:55:33,192 | INFO     | process IDs to be killed: [615915] (in reverse order)
[2025-10-04 05:56:13] 2025-10-04 12:55:33,260 | WARNING  | found no corresponding commands to process id(s)
[2025-10-04 05:56:13] 2025-10-04 12:55:33,260 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-04 05:56:13] 2025-10-04 12:55:33,299 | INFO     | did not find any defunct processes belonging to 615915
[2025-10-04 05:56:13] 2025-10-04 12:55:33,315 | INFO     | did not find any defunct processes belonging to 615915
[2025-10-04 05:56:13] 2025-10-04 12:55:33,315 | INFO     | ready for new job
[2025-10-04 05:56:13] 2025-10-04 12:55:33,316 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-04 05:56:13] 2025-10-04 12:55:33,317 | INFO     | ***************************************
[2025-10-04 05:56:13] 2025-10-04 12:55:33,317 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-04 05:56:13] 2025-10-04 12:55:33,317 | INFO     | ***************************************
[2025-10-04 05:56:13] 2025-10-04 12:55:33,317 | INFO     | 
[2025-10-04 05:56:13] 2025-10-04 12:55:33,319 | INFO     | architecture information:
[2025-10-04 05:56:13] 2025-10-04 12:55:33,323 | INFO     | executing command: cat /etc/os-release
[2025-10-04 05:56:13] 2025-10-04 12:55:33,468 | INFO     | cat /etc/os-release:
[2025-10-04 05:56:13] NAME="CentOS Linux"
[2025-10-04 05:56:13] VERSION="7 (Core)"
[2025-10-04 05:56:13] ID="centos"
[2025-10-04 05:56:13] ID_LIKE="rhel fedora"
[2025-10-04 05:56:13] VERSION_ID="7"
[2025-10-04 05:56:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-04 05:56:13] ANSI_COLOR="0;31"
[2025-10-04 05:56:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-04 05:56:13] HOME_URL="https://www.centos.org/"
[2025-10-04 05:56:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-04 05:56:13] 
[2025-10-04 05:56:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-04 05:56:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-04 05:56:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-04 05:56:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-04 05:56:13] 
[2025-10-04 05:56:13] 2025-10-04 12:55:33,469 | INFO     | ***************************************
[2025-10-04 05:56:13] 2025-10-04 12:55:33,971 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-04 05:56:13] 2025-10-04 12:55:34,060 | INFO     | sufficient remaining disk space (1783420157952 B)
[2025-10-04 05:56:13] 2025-10-04 12:55:34,061 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-04 05:56:13] 2025-10-04 12:55:34,061 | INFO     | current server update state: UPDATING_FINAL
[2025-10-04 05:56:13] 2025-10-04 12:55:34,061 | INFO     | update_server=False
[2025-10-04 05:56:13] 2025-10-04 12:55:34,061 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-04 05:56:13] 2025-10-04 12:55:34,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-04 05:56:13] 2025-10-04 12:55:34,850 | INFO     | all job control threads have been joined
[2025-10-04 05:56:13] 2025-10-04 12:55:34,964 | INFO     | all data control threads have been joined
[2025-10-04 05:56:13] 2025-10-04 12:55:34,993 | INFO     | all payload control threads have been joined
[2025-10-04 05:56:13] 2025-10-04 12:55:34,995 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-04 05:56:13] 2025-10-04 12:55:34,995 | INFO     | aborting loop
[2025-10-04 05:56:13] 2025-10-04 12:55:35,067 | INFO     | [job] retrieve thread has finished
[2025-10-04 05:56:13] 2025-10-04 12:55:35,453 | INFO     | [payload] validate_post thread has finished
[2025-10-04 05:56:13] 2025-10-04 12:55:35,855 | INFO     | [job] control thread has finished
[2025-10-04 05:56:13] 2025-10-04 12:55:35,938 | INFO     | [payload] failed_post thread has finished
[2025-10-04 05:56:13] 2025-10-04 12:55:35,950 | INFO     | [payload] execute_payloads thread has finished
[2025-10-04 05:56:13] 2025-10-04 12:55:35,970 | INFO     | [data] control thread has finished
[2025-10-04 05:56:13] 2025-10-04 12:55:35,999 | INFO     | [payload] control thread has finished
[2025-10-04 05:56:13] 2025-10-04 12:55:36,001 | INFO     | [job] job monitor thread has finished
[2025-10-04 05:56:13] 2025-10-04 12:55:36,042 | INFO     | [job] validate thread has finished
[2025-10-04 05:56:13] 2025-10-04 12:55:36,068 | INFO     | [data] copytool_out thread has finished
[2025-10-04 05:56:13] 2025-10-04 12:55:36,214 | INFO     | [job] create_data_payload thread has finished
[2025-10-04 05:56:13] 2025-10-04 12:55:36,245 | INFO     | [payload] validate_pre thread has finished
[2025-10-04 05:56:13] 2025-10-04 12:55:36,246 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-04 05:56:13] 2025-10-04 12:55:36,346 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-04 05:56:13] 2025-10-04 12:55:36,489 | INFO     | [data] copytool_in thread has finished
[2025-10-04 05:56:13] 2025-10-04 12:55:37,086 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-04 05:56:13] 2025-10-04 12:55:37,352 | INFO     | [job] queue monitor thread has finished
[2025-10-04 05:56:13] 2025-10-04 12:55:41,094 | INFO     | [data] queue_monitor thread has finished
[2025-10-04 05:56:13] 2025-10-04 12:56:03,250 | INFO     | PID=609270 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-04 05:56:13] 2025-10-04 12:56:03,250 | INFO     | .. there are 28 such processes running
[2025-10-04 05:56:13] 2025-10-04 12:56:03,250 | INFO     | found 0 job(s) in 20 queues
[2025-10-04 05:56:13] 2025-10-04 12:56:03,250 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-04 05:56:13] 2025-10-04 12:56:03,250 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-04 05:56:13] 2025-10-04 12:56:05,253 | INFO     | [monitor] cgroup control has ended
[2025-10-04 05:56:13] 2025-10-04 12:56:07,109 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140074026948416)>', '<ExcThread(monitor, started 140073597114112)>']
[2025-10-04 05:56:13] 2025-10-04 12:56:07,274 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-04 05:56:13] 2025-10-04 12:56:07,274 | INFO     | [monitor] control thread has ended
[2025-10-04 05:56:13] 2025-10-04 12:56:12,135 | INFO     | all workflow threads have been joined
[2025-10-04 05:56:13] 2025-10-04 12:56:12,136 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-04 05:56:13] 2025-10-04 12:56:12,136 | INFO     | traces error code: 0
[2025-10-04 05:56:13] 2025-10-04 12:56:12,136 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-04 05:56:13] 2025-10-04 12:56:12,378 [wrapper] ==== pilot stdout END ====
[2025-10-04 05:56:13] 2025-10-04 12:56:12,409 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-04 05:56:13] 2025-10-04 12:56:12,440 [wrapper] pilotpid: 609270
[2025-10-04 05:56:13] 2025-10-04 12:56:12,462 [wrapper] Pilot exit status: 0
[2025-10-04 05:56:13] 2025-10-04 12:56:12,560 [wrapper] pandaids: 6829515471
[2025-10-04 05:56:13] 2025-10-04 12:56:12,803 [wrapper] cleanup supervisor_pilot  609276 609271
[2025-10-04 05:56:13] 2025-10-04 12:56:12,813 [wrapper] Test setup, not cleaning
[2025-10-04 05:56:13] 2025-10-04 12:56:12,824 [wrapper] apfmon messages muted
[2025-10-04 05:56:13] 2025-10-04 12:56:12,855 [wrapper] ==== wrapper stdout END ====
[2025-10-04 05:56:13] 2025-10-04 12:56:12,885 [wrapper] ==== wrapper stderr END ====
[2025-10-04 05:56:13]  *** Error codes and diagnostics ***
[2025-10-04 05:56:13]     "exeErrorCode": 65,
[2025-10-04 05:56:13]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-04 05:56:13]     "pilotErrorCode": 1305,
[2025-10-04 05:56:13]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-04 05:56:13]  *** Listing of results directory ***
[2025-10-04 05:56:13] total 211832
[2025-10-04 05:56:13] -rw-r--r--. 1 boinc boinc    552446 Oct  4 03:28 pilot3.tar.gz
[2025-10-04 05:56:13] -rwx------. 1 boinc boinc     36292 Oct  4 03:49 runpilot2-wrapper.sh
[2025-10-04 05:56:13] -rw-r--r--. 1 boinc boinc      5112 Oct  4 03:49 queuedata.json
[2025-10-04 05:56:13] -rw-r--r--. 1 boinc boinc       100 Oct  4 05:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-04 05:56:13] -rwxr-xr-x. 1 boinc boinc      7986 Oct  4 05:51 run_atlas
[2025-10-04 05:56:13] -rw-r--r--. 1 boinc boinc       105 Oct  4 05:51 job.xml
[2025-10-04 05:56:13] -rw-r--r--. 1 boinc boinc      6593 Oct  4 05:51 init_data.xml
[2025-10-04 05:56:13] -rw-r--r--. 2 boinc boinc 212818890 Oct  4 05:51 EVNT.46376901._002069.pool.root.1
[2025-10-04 05:56:13] -rw-r--r--. 2 boinc boinc     15120 Oct  4 05:51 start_atlas.sh
[2025-10-04 05:56:13] drwxrwx--x. 2 boinc boinc      4096 Oct  4 05:51 shared
[2025-10-04 05:56:13] -rw-r--r--. 2 boinc boinc    565593 Oct  4 05:51 input.tar.gz
[2025-10-04 05:56:13] -rw-r--r--. 1 boinc boinc         0 Oct  4 05:51 boinc_lockfile
[2025-10-04 05:56:13] -rw-r--r--. 1 boinc boinc      2519 Oct  4 05:51 pandaJob.out
[2025-10-04 05:56:13] -rw-------. 1 boinc boinc    976024 Oct  4 05:52 agis_schedconf.cvmfs.json
[2025-10-04 05:56:13] -rw-------. 1 boinc boinc   1560401 Oct  4 05:52 agis_ddmendpoints.agis.ALL.json
[2025-10-04 05:56:13] drwx------. 4 boinc boinc      4096 Oct  4 05:52 pilot3
[2025-10-04 05:56:13] -rw-r--r--. 1 boinc boinc       522 Oct  4 05:53 boinc_task_state.xml
[2025-10-04 05:56:13] -rw-------. 1 boinc boinc       977 Oct  4 05:53 memory_monitor_summary.json
[2025-10-04 05:56:13] -rw-------. 1 boinc boinc     20831 Oct  4 05:53 log.46376905._057726.job.log.tgz.1
[2025-10-04 05:56:13] -rw-------. 1 boinc boinc        95 Oct  4 05:55 pilot_heartbeat.json
[2025-10-04 05:56:13] -rw-------. 1 boinc boinc      8404 Oct  4 05:55 heartbeat.json
[2025-10-04 05:56:13] -rw-r--r--. 1 boinc boinc      8192 Oct  4 05:56 boinc_mmap_file
[2025-10-04 05:56:13] -rw-r--r--. 1 boinc boinc        22 Oct  4 05:56 wrapper_checkpoint.txt
[2025-10-04 05:56:13] -rw-------. 1 boinc boinc      4822 Oct  4 05:56 pilotlog.txt
[2025-10-04 05:56:13] -rw-------. 1 boinc boinc     86445 Oct  4 05:56 log.46376905._057726.job.log.1
[2025-10-04 05:56:13] -rw-------. 1 boinc boinc       188 Oct  4 05:56 output.list
[2025-10-04 05:56:13] -rw-r--r--. 1 boinc boinc       620 Oct  4 05:56 runtime_log
[2025-10-04 05:56:13] -rw-------. 1 boinc boinc    122880 Oct  4 05:56 result.tar.gz
[2025-10-04 05:56:13] -rw-r--r--. 1 boinc boinc      8528 Oct  4 05:56 runtime_log.err
[2025-10-04 05:56:13] -rw-------. 1 boinc boinc       643 Oct  4 05:56 jp2LDml0EP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmzKDMDmEkReDn.diag
[2025-10-04 05:56:13] -rw-r--r--. 1 boinc boinc     21133 Oct  4 05:56 stderr.txt
[2025-10-04 05:56:13] No HITS result produced
[2025-10-04 05:56:13]  *** Contents of shared directory: ***
[2025-10-04 05:56:13] total 208524
[2025-10-04 05:56:13] -rw-r--r--. 2 boinc boinc 212818890 Oct  4 05:51 ATLAS.root_0
[2025-10-04 05:56:13] -rw-r--r--. 2 boinc boinc     15120 Oct  4 05:51 start_atlas.sh
[2025-10-04 05:56:13] -rw-r--r--. 2 boinc boinc    565593 Oct  4 05:51 input.tar.gz
[2025-10-04 05:56:13] -rw-------. 1 boinc boinc    122880 Oct  4 05:56 result.tar.gz
05:56:15 (605607): run_atlas exited; CPU time 23.705023
05:56:15 (605607): called boinc_finish(0)

</stderr_txt>
]]>


©2025 CERN