Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:35:26 (1680659): wrapper (7.7.26015): starting
05:35:26 (1680659): wrapper: running run_atlas (--nthreads 12)
[2025-10-04 05:35:26] Arguments: --nthreads 12
[2025-10-04 05:35:26] Threads: 12
[2025-10-04 05:35:26] Checking for CVMFS
[2025-10-04 05:35:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-04 05:35:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-04 05:35:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-04 05:35:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-04 05:35:27] 2.11.5.0 2471 19612 197952 151328 2 378 41935309 45568001 24081 130560 0 143609511 99.815 75907112 25632 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-04 05:35:27] CVMFS is ok
[2025-10-04 05:35:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-04 05:35:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-04 05:35:27] Further information can be found at the LHC@home message board.
[2025-10-04 05:35:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-04 05:35:27] Checking for apptainer binary...
[2025-10-04 05:35:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-04 05:35:27] Running /usr/bin/apptainer --version
[2025-10-04 05:35:27] apptainer version 1.4.1-1.el9
[2025-10-04 05:35:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-04 05:35:28] wns0035.triumf.lcg
[2025-10-04 05:35:28] apptainer works
[2025-10-04 05:35:28] Set ATHENA_PROC_NUMBER=12
[2025-10-04 05:35:28] Set ATHENA_CORE_NUMBER=12
[2025-10-04 05:35:28] Starting ATLAS job with PandaID=6829514032
[2025-10-04 05:35:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-04 05:41:30]  *** The last 200 lines of the pilot log: ***
[2025-10-04 05:41:30] 2025-10-04 12:40:55,759 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-04 05:41:30] 2025-10-04 12:40:55,780 | WARNING  | wrong length of table data, x=[1759581459.0], y=[2056.0] (must be same and length>=4)
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | could have reported an average CPU frequency of 2797 MHz (4 samples)
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | ..............................
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . Timing measurements:
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . get job = 0 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . initial setup = 4 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . payload setup = 33 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . stage-in = 0 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . payload execution = 54 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . stage-out = 1 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . log creation = 0 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | ..............................
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6829514032/pilotlog.txt
[2025-10-04 05:41:30] 2025-10-04 12:40:55,856 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-04 05:41:30] - Log from pilotlog.txt -
[2025-10-04 05:41:30] 2025-10-04 12:40:55,758 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6829514032/memory_monitor_summary.json (trf name=prmon)
[2025-10-04 05:41:30] 2025-10-04 12:40:55,759 | INFO     | extracted standard info from prmon json
[2025-10-04 05:41:30] 2025-10-04 12:40:55,759 | INFO     | extracted standard memory fields from prmon json
[2025-10-04 05:41:30] 2025-10-04 12:40:55,759 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-04 05:41:30] 2025-10-04 12:40:55,759 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-04 05:41:30] 2025-10-04 12:40:55,759 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-04 05:41:30] 2025-10-04 12:40:55,780 | WARNING  | wrong length of table data, x=[1759581459.0], y=[2056.0] (must be same and length>=4)
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | could have reported an average CPU frequency of 2797 MHz (4 samples)
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | ..............................
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . Timing measurements:
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . get job = 0 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . initial setup = 4 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . payload setup = 33 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . stage-in = 0 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . payload execution = 54 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . stage-out = 1 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . log creation = 0 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | ..............................
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6829514032/pilotlog.txt
[2025-10-04 05:41:30] 2025-10-04 12:40:55,856 | WARNING  | 
[2025-10-04 05:41:30] [begin log extracts]
[2025-10-04 05:41:30] - Log from pilotlog.txt -
[2025-10-04 05:41:30] 2025-10-04 12:40:55,758 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6829514032/memory_monitor_summary.json (trf name=prmon)
[2025-10-04 05:41:30] 2025-10-04 12:40:55,759 | INFO     | extracted standard info from prmon json
[2025-10-04 05:41:30] 2025-10-04 12:40:55,759 | INFO     | extracted standard memory fields from prmon json
[2025-10-04 05:41:30] 2025-10-04 12:40:55,759 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-04 05:41:30] 2025-10-04 12:40:55,759 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-04 05:41:30] 2025-10-04 12:40:55,759 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-04 05:41:30] 2025-10-04 12:40:55,780 | WARNING  | wrong length of table data, x=[1759581459.0], y=[2056.0] (must be same and length>=4)
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | could have reported an average CPU frequency of 2797 MHz (4 samples)
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | ..............................
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . Timing measurements:
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . get job = 0 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . initial setup = 4 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . payload setup = 33 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . stage-in = 0 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . payload execution = 54 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . stage-out = 1 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | . log creation = 0 s
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | ..............................
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-04 05:41:30] 2025-10-04 12:40:55,781 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6829514032/pilotlog.txt
[2025-10-04 05:41:30] [end log extracts]
[2025-10-04 05:41:30] 2025-10-04 12:40:55,856 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-04 05:41:30] 2025-10-04 12:40:55,857 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-04 05:41:30] 2025-10-04 12:40:56,484 | INFO     | 
[2025-10-04 05:41:30] 2025-10-04 12:40:56,484 | INFO     | job summary report
[2025-10-04 05:41:30] 2025-10-04 12:40:56,484 | INFO     | --------------------------------------------------
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | PanDA job id: 6829514032
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | task id: 46376905
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-04 05:38:13,978 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | pilot state: failed 
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | transexitcode: 65
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | exeerrorcode: 65
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | exitcode: 65
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | cpuconsumptiontime: 18 s
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | nevents: 0
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | neventsw: 0
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | pid: 1698586
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | pgrp: 1698586
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | corecount: 12
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | event service: False
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | sizes: {0: 2348586, 1: 2348841, 12: 2348841, 18: 2349131, 23: 2349159, 92: 2372448, 93: 2372552, 95: 2376900, 246: 2377038}
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | --------------------------------------------------
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | 
[2025-10-04 05:41:30] 2025-10-04 12:40:56,485 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-04 05:41:30] 2025-10-04 12:40:56,543 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-04 05:41:30] 2025-10-04 12:40:56,544 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-04 05:41:30] 2025-10-04 12:40:56,544 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-04 05:41:30] 2025-10-04 12:40:56,544 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-04 05:41:30] 2025-10-04 12:40:56,544 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-04 05:41:30] 2025-10-04 12:40:56,544 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-04 05:41:30] 2025-10-04 12:40:56,544 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-04 05:41:30] 2025-10-04 12:40:56,544 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-04 05:41:30] 2025-10-04 12:40:56,544 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-04 05:41:30] 2025-10-04 12:40:56,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-04 05:41:30] 2025-10-04 12:40:56,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-04 05:41:30] 2025-10-04 12:40:56,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-04 05:41:30] 2025-10-04 12:40:56,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-04 05:41:30] 2025-10-04 12:40:56,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-04 05:41:30] 2025-10-04 12:40:56,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-04 05:41:30] 2025-10-04 12:40:56,545 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-04 05:41:30] 2025-10-04 12:40:56,545 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-04 05:41:30] 2025-10-04 12:40:56,545 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-04 05:41:30] 2025-10-04 12:40:56,545 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-04 05:41:30] 2025-10-04 12:40:56,545 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-04 05:41:30] 2025-10-04 12:40:56,545 | INFO     | job 6829514032 has completed (purged errors)
[2025-10-04 05:41:30] 2025-10-04 12:40:56,545 | INFO     | overall cleanup function is called
[2025-10-04 05:41:30] 2025-10-04 12:40:57,551 | INFO     | --- collectZombieJob: --- 10, [1698586]
[2025-10-04 05:41:30] 2025-10-04 12:40:57,551 | INFO     | zombie collector waiting for pid 1698586
[2025-10-04 05:41:30] 2025-10-04 12:40:57,552 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-04 05:41:30] 2025-10-04 12:40:57,552 | INFO     | collected zombie processes
[2025-10-04 05:41:30] 2025-10-04 12:40:57,552 | INFO     | will attempt to kill all subprocesses of pid=1698586
[2025-10-04 05:41:30] 2025-10-04 12:40:58,038 | INFO     | process IDs to be killed: [1698586] (in reverse order)
[2025-10-04 05:41:30] 2025-10-04 12:40:58,226 | WARNING  | found no corresponding commands to process id(s)
[2025-10-04 05:41:30] 2025-10-04 12:40:58,226 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-04 05:41:30] 2025-10-04 12:40:58,284 | INFO     | did not find any defunct processes belonging to 1698586
[2025-10-04 05:41:30] 2025-10-04 12:40:58,362 | INFO     | did not find any defunct processes belonging to 1698586
[2025-10-04 05:41:30] 2025-10-04 12:40:58,362 | INFO     | ready for new job
[2025-10-04 05:41:30] 2025-10-04 12:40:58,362 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-04 05:41:30] 2025-10-04 12:40:58,377 | INFO     | ***************************************
[2025-10-04 05:41:30] 2025-10-04 12:40:58,378 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-04 05:41:30] 2025-10-04 12:40:58,378 | INFO     | ***************************************
[2025-10-04 05:41:30] 2025-10-04 12:40:58,378 | INFO     | 
[2025-10-04 05:41:30] 2025-10-04 12:40:58,385 | INFO     | architecture information:
[2025-10-04 05:41:30] 2025-10-04 12:40:58,417 | INFO     | executing command: cat /etc/os-release
[2025-10-04 05:41:30] 2025-10-04 12:40:58,463 | INFO     | cat /etc/os-release:
[2025-10-04 05:41:30] NAME="CentOS Linux"
[2025-10-04 05:41:30] VERSION="7 (Core)"
[2025-10-04 05:41:30] ID="centos"
[2025-10-04 05:41:30] ID_LIKE="rhel fedora"
[2025-10-04 05:41:30] VERSION_ID="7"
[2025-10-04 05:41:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-04 05:41:30] ANSI_COLOR="0;31"
[2025-10-04 05:41:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-04 05:41:30] HOME_URL="https://www.centos.org/"
[2025-10-04 05:41:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-04 05:41:30] 
[2025-10-04 05:41:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-04 05:41:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-04 05:41:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-04 05:41:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-04 05:41:30] 
[2025-10-04 05:41:30] 2025-10-04 12:40:58,464 | INFO     | ***************************************
[2025-10-04 05:41:30] 2025-10-04 12:40:58,967 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-04 05:41:30] 2025-10-04 12:40:59,093 | INFO     | sufficient remaining disk space (1982400036864 B)
[2025-10-04 05:41:30] 2025-10-04 12:40:59,094 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-04 05:41:30] 2025-10-04 12:40:59,094 | INFO     | current server update state: UPDATING_FINAL
[2025-10-04 05:41:30] 2025-10-04 12:40:59,094 | INFO     | update_server=False
[2025-10-04 05:41:30] 2025-10-04 12:40:59,094 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-04 05:41:30] 2025-10-04 12:40:59,101 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-04 05:41:30] 2025-10-04 12:40:59,264 | INFO     | all data control threads have been joined
[2025-10-04 05:41:30] 2025-10-04 12:40:59,359 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-04 05:41:30] 2025-10-04 12:40:59,359 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-04 05:41:30] 2025-10-04 12:40:59,360 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-04 05:41:30] 2025-10-04 12:40:59,360 | INFO     | will abort loop
[2025-10-04 05:41:30] 2025-10-04 12:41:00,100 | INFO     | [job] retrieve thread has finished
[2025-10-04 05:41:30] 2025-10-04 12:41:00,105 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-04 05:41:30] 2025-10-04 12:41:00,147 | INFO     | all job control threads have been joined
[2025-10-04 05:41:30] 2025-10-04 12:41:00,248 | INFO     | all payload control threads have been joined
[2025-10-04 05:41:30] 2025-10-04 12:41:00,271 | INFO     | [data] control thread has finished
[2025-10-04 05:41:30] 2025-10-04 12:41:00,363 | INFO     | [job] create_data_payload thread has finished
[2025-10-04 05:41:30] 2025-10-04 12:41:00,365 | INFO     | [job] job monitor thread has finished
[2025-10-04 05:41:30] 2025-10-04 12:41:00,418 | INFO     | [payload] validate_post thread has finished
[2025-10-04 05:41:30] 2025-10-04 12:41:00,508 | INFO     | [job] validate thread has finished
[2025-10-04 05:41:30] 2025-10-04 12:41:00,509 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-04 05:41:30] 2025-10-04 12:41:00,869 | INFO     | [payload] validate_pre thread has finished
[2025-10-04 05:41:30] 2025-10-04 12:41:01,119 | INFO     | [data] copytool_out thread has finished
[2025-10-04 05:41:30] 2025-10-04 12:41:01,153 | INFO     | [job] control thread has finished
[2025-10-04 05:41:30] 2025-10-04 12:41:01,175 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-04 05:41:30] 2025-10-04 12:41:01,253 | INFO     | [payload] control thread has finished
[2025-10-04 05:41:30] 2025-10-04 12:41:01,455 | INFO     | [payload] failed_post thread has finished
[2025-10-04 05:41:30] 2025-10-04 12:41:01,520 | INFO     | [payload] execute_payloads thread has finished
[2025-10-04 05:41:30] 2025-10-04 12:41:01,530 | INFO     | [data] copytool_in thread has finished
[2025-10-04 05:41:30] 2025-10-04 12:41:02,181 | INFO     | [job] queue monitor thread has finished
[2025-10-04 05:41:30] 2025-10-04 12:41:04,124 | INFO     | [data] queue_monitor thread has finished
[2025-10-04 05:41:30] 2025-10-04 12:41:06,148 | INFO     | [monitor] cgroup control has ended
[2025-10-04 05:41:30] 2025-10-04 12:41:08,092 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140207305967424)>', '<ExcThread(monitor, started 140206749492992)>']
[2025-10-04 05:41:30] 2025-10-04 12:41:13,119 | INFO     | all workflow threads have been joined
[2025-10-04 05:41:30] 2025-10-04 12:41:13,119 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-04 05:41:30] 2025-10-04 12:41:13,120 | INFO     | traces error code: 0
[2025-10-04 05:41:30] 2025-10-04 12:41:13,120 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-04 05:41:30] 2025-10-04 12:41:28,681 | INFO     | PID=1684487 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-04 05:41:30] 2025-10-04 12:41:28,681 | INFO     | .. there are 42 such processes running
[2025-10-04 05:41:30] 2025-10-04 12:41:28,682 | INFO     | found 0 job(s) in 20 queues
[2025-10-04 05:41:30] 2025-10-04 12:41:28,682 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-04 05:41:30] 2025-10-04 12:41:28,682 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-04 05:41:30] 2025-10-04 12:41:28,682 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-04 05:41:30] 2025-10-04 12:41:28,682 | INFO     | [monitor] control thread has ended
[2025-10-04 05:41:30] 2025-10-04 12:41:29,193 [wrapper] ==== pilot stdout END ====
[2025-10-04 05:41:30] 2025-10-04 12:41:29,238 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-04 05:41:30] 2025-10-04 12:41:29,261 [wrapper] pilotpid: 1684487
[2025-10-04 05:41:30] 2025-10-04 12:41:29,286 [wrapper] Pilot exit status: 0
[2025-10-04 05:41:30] 2025-10-04 12:41:29,428 [wrapper] pandaids: 6829514032
[2025-10-04 05:41:30] 2025-10-04 12:41:29,625 [wrapper] cleanup supervisor_pilot 1684493 1684488
[2025-10-04 05:41:30] 2025-10-04 12:41:29,644 [wrapper] Test setup, not cleaning
[2025-10-04 05:41:30] 2025-10-04 12:41:29,663 [wrapper] apfmon messages muted
[2025-10-04 05:41:30] 2025-10-04 12:41:29,669 [wrapper] ==== wrapper stdout END ====
[2025-10-04 05:41:30] 2025-10-04 12:41:29,682 [wrapper] ==== wrapper stderr END ====
[2025-10-04 05:41:30]  *** Error codes and diagnostics ***
[2025-10-04 05:41:30]     "exeErrorCode": 65,
[2025-10-04 05:41:30]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-04 05:41:30]     "pilotErrorCode": 1305,
[2025-10-04 05:41:30]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-04 05:41:30]  *** Listing of results directory ***
[2025-10-04 05:41:30] total 213168
[2025-10-04 05:41:30] -rw-r--r--. 1 boinc boinc    552446 Oct  4 03:03 pilot3.tar.gz
[2025-10-04 05:41:30] -rw-r--r--. 1 boinc boinc      5112 Oct  4 03:19 queuedata.json
[2025-10-04 05:41:30] -rwx------. 1 boinc boinc     36292 Oct  4 03:20 runpilot2-wrapper.sh
[2025-10-04 05:41:30] -rw-r--r--. 1 boinc boinc       100 Oct  4 05:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-04 05:41:30] -rwxr-xr-x. 1 boinc boinc      7986 Oct  4 05:35 run_atlas
[2025-10-04 05:41:30] -rw-r--r--. 1 boinc boinc       105 Oct  4 05:35 job.xml
[2025-10-04 05:41:30] -rw-r--r--. 1 boinc boinc      6594 Oct  4 05:35 init_data.xml
[2025-10-04 05:41:30] -rw-r--r--. 2 boinc boinc 214158115 Oct  4 05:35 EVNT.46376901._002049.pool.root.1
[2025-10-04 05:41:30] -rw-r--r--. 2 boinc boinc     15120 Oct  4 05:35 start_atlas.sh
[2025-10-04 05:41:30] drwxrwx--x. 2 boinc boinc      4096 Oct  4 05:35 shared
[2025-10-04 05:41:30] -rw-r--r--. 2 boinc boinc    565602 Oct  4 05:35 input.tar.gz
[2025-10-04 05:41:30] -rw-r--r--. 1 boinc boinc         0 Oct  4 05:35 boinc_lockfile
[2025-10-04 05:41:30] -rw-r--r--. 1 boinc boinc      2519 Oct  4 05:35 pandaJob.out
[2025-10-04 05:41:30] -rw-------. 1 boinc boinc    976024 Oct  4 05:36 agis_schedconf.cvmfs.json
[2025-10-04 05:41:30] -rw-------. 1 boinc boinc   1560401 Oct  4 05:36 agis_ddmendpoints.agis.ALL.json
[2025-10-04 05:41:30] drwx------. 4 boinc boinc      4096 Oct  4 05:36 pilot3
[2025-10-04 05:41:30] -rw-------. 1 boinc boinc       949 Oct  4 05:38 memory_monitor_summary.json
[2025-10-04 05:41:30] -rw-------. 1 boinc boinc     21932 Oct  4 05:38 log.46376905._057215.job.log.tgz.1
[2025-10-04 05:41:30] -rw-------. 1 boinc boinc      8391 Oct  4 05:40 heartbeat.json
[2025-10-04 05:41:30] -rw-r--r--. 1 boinc boinc       523 Oct  4 05:41 boinc_task_state.xml
[2025-10-04 05:41:30] -rw-------. 1 boinc boinc        95 Oct  4 05:41 pilot_heartbeat.json
[2025-10-04 05:41:30] -rw-------. 1 boinc boinc       823 Oct  4 05:41 pilotlog.txt
[2025-10-04 05:41:30] -rw-------. 1 boinc boinc     96931 Oct  4 05:41 log.46376905._057215.job.log.1
[2025-10-04 05:41:30] -rw-r--r--. 1 boinc boinc        22 Oct  4 05:41 wrapper_checkpoint.txt
[2025-10-04 05:41:30] -rw-r--r--. 1 boinc boinc      8192 Oct  4 05:41 boinc_mmap_file
[2025-10-04 05:41:30] -rw-------. 1 boinc boinc       188 Oct  4 05:41 output.list
[2025-10-04 05:41:30] -rw-r--r--. 1 boinc boinc       620 Oct  4 05:41 runtime_log
[2025-10-04 05:41:30] -rw-------. 1 boinc boinc    143360 Oct  4 05:41 result.tar.gz
[2025-10-04 05:41:30] -rw-------. 1 boinc boinc       645 Oct  4 05:41 XpBMDmpYEP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmuGDMDmp7pZPm.diag
[2025-10-04 05:41:30] -rw-r--r--. 1 boinc boinc      8528 Oct  4 05:41 runtime_log.err
[2025-10-04 05:41:30] -rw-r--r--. 1 boinc boinc     21832 Oct  4 05:41 stderr.txt
[2025-10-04 05:41:30] No HITS result produced
[2025-10-04 05:41:30]  *** Contents of shared directory: ***
[2025-10-04 05:41:30] total 209856
[2025-10-04 05:41:30] -rw-r--r--. 2 boinc boinc 214158115 Oct  4 05:35 ATLAS.root_0
[2025-10-04 05:41:30] -rw-r--r--. 2 boinc boinc     15120 Oct  4 05:35 start_atlas.sh
[2025-10-04 05:41:30] -rw-r--r--. 2 boinc boinc    565602 Oct  4 05:35 input.tar.gz
[2025-10-04 05:41:30] -rw-------. 1 boinc boinc    143360 Oct  4 05:41 result.tar.gz
05:41:31 (1680659): run_atlas exited; CPU time 29.932682
05:41:31 (1680659): called boinc_finish(0)

</stderr_txt>
]]>

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