Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:29:40 (3286857): wrapper (7.7.26015): starting
19:29:40 (3286857): wrapper: running run_atlas (--nthreads 12)
[2025-10-03 19:29:40] Arguments: --nthreads 12
[2025-10-03 19:29:40] Threads: 12
[2025-10-03 19:29:40] Checking for CVMFS
[2025-10-03 19:29:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-03 19:29:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-03 19:29:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-03 19:29:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-03 19:29:41] 2.11.5.0 2579 19376 132776 151312 0 423 29354484 45568001 16868 130560 0 146381715 99.825 72566949 20119 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-03 19:29:41] CVMFS is ok
[2025-10-03 19:29:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-03 19:29:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-03 19:29:41] Further information can be found at the LHC@home message board.
[2025-10-03 19:29:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-03 19:29:41] Checking for apptainer binary...
[2025-10-03 19:29:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-03 19:29:41] Running /usr/bin/apptainer --version
[2025-10-03 19:29:41] apptainer version 1.4.1-1.el9
[2025-10-03 19:29:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-03 19:29:41] wns0050.triumf.lcg
[2025-10-03 19:29:41] apptainer works
[2025-10-03 19:29:41] Set ATHENA_PROC_NUMBER=12
[2025-10-03 19:29:41] Set ATHENA_CORE_NUMBER=12
[2025-10-03 19:29:41] Starting ATLAS job with PandaID=6828827652
[2025-10-03 19:29:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-03 19:32:59]  *** The last 200 lines of the pilot log: ***
[2025-10-03 19:32:59] 2025-10-04 02:32:27,901 | WARNING  | found no stored workdir sizes
[2025-10-03 19:32:59] 2025-10-04 02:32:27,901 | INFO     | will not add max space = 0 B to job metrics
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | WARNING  | wrong length of table data, x=[1759545013.0], y=[1337.0] (must be same and length>=4)
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | could have reported an average CPU frequency of 2815 MHz (4 samples)
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | ..............................
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . Timing measurements:
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . get job = 0 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . initial setup = 2 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . payload setup = 4 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . stage-in = 0 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . payload execution = 14 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . stage-out = 0 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . log creation = 0 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | ..............................
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-03 19:32:59] 2025-10-04 02:32:27,903 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6828827652/pilotlog.txt
[2025-10-03 19:32:59] 2025-10-04 02:32:27,912 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-03 19:32:59] - Log from pilotlog.txt -
[2025-10-03 19:32:59] 2025-10-04 02:32:27,901 | INFO     | extracted standard memory fields from prmon json
[2025-10-03 19:32:59] 2025-10-04 02:32:27,901 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-03 19:32:59] 2025-10-04 02:32:27,901 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-03 19:32:59] 2025-10-04 02:32:27,901 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-03 19:32:59] 2025-10-04 02:32:27,901 | WARNING  | found no stored workdir sizes
[2025-10-03 19:32:59] 2025-10-04 02:32:27,901 | INFO     | will not add max space = 0 B to job metrics
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | WARNING  | wrong length of table data, x=[1759545013.0], y=[1337.0] (must be same and length>=4)
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | could have reported an average CPU frequency of 2815 MHz (4 samples)
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | ..............................
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . Timing measurements:
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . get job = 0 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . initial setup = 2 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . payload setup = 4 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . stage-in = 0 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . payload execution = 14 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . stage-out = 0 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . log creation = 0 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | ..............................
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-03 19:32:59] 2025-10-04 02:32:27,903 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6828827652/pilotlog.txt
[2025-10-03 19:32:59] 2025-10-04 02:32:27,913 | WARNING  | 
[2025-10-03 19:32:59] [begin log extracts]
[2025-10-03 19:32:59] - Log from pilotlog.txt -
[2025-10-03 19:32:59] 2025-10-04 02:32:27,901 | INFO     | extracted standard memory fields from prmon json
[2025-10-03 19:32:59] 2025-10-04 02:32:27,901 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-03 19:32:59] 2025-10-04 02:32:27,901 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-03 19:32:59] 2025-10-04 02:32:27,901 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-03 19:32:59] 2025-10-04 02:32:27,901 | WARNING  | found no stored workdir sizes
[2025-10-03 19:32:59] 2025-10-04 02:32:27,901 | INFO     | will not add max space = 0 B to job metrics
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | WARNING  | wrong length of table data, x=[1759545013.0], y=[1337.0] (must be same and length>=4)
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | could have reported an average CPU frequency of 2815 MHz (4 samples)
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | ..............................
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . Timing measurements:
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . get job = 0 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . initial setup = 2 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . payload setup = 4 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . stage-in = 0 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . payload execution = 14 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . stage-out = 0 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | . log creation = 0 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | ..............................
[2025-10-03 19:32:59] 2025-10-04 02:32:27,902 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-03 19:32:59] 2025-10-04 02:32:27,903 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6828827652/pilotlog.txt
[2025-10-03 19:32:59] [end log extracts]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,913 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-03 19:32:59] 2025-10-04 02:32:27,914 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-03 19:32:59] 2025-10-04 02:32:27,972 | INFO     | 
[2025-10-03 19:32:59] 2025-10-04 02:32:27,972 | INFO     | job summary report
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | --------------------------------------------------
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | PanDA job id: 6828827652
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | task id: 46376905
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-03 19:30:19,648 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | pilot state: failed 
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | transexitcode: 65
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | exeerrorcode: 65
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | exitcode: 65
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | cpuconsumptiontime: 17 s
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | nevents: 0
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | neventsw: 0
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | pid: 3310938
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | pgrp: 3310938
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | corecount: 12
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | event service: False
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | sizes: {0: 2348813, 4: 2349075, 11: 2349103, 23: 2376524, 24: 2376524, 144: 2376690}
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | --------------------------------------------------
[2025-10-03 19:32:59] 2025-10-04 02:32:27,973 | INFO     | 
[2025-10-03 19:32:59] 2025-10-04 02:32:27,974 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-03 19:32:59] 2025-10-04 02:32:27,988 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,989 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,989 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,989 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,989 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,989 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,990 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,990 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,990 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-03 19:32:59] 2025-10-04 02:32:27,990 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,990 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-03 19:32:59] 2025-10-04 02:32:27,990 | INFO     | job 6828827652 has completed (purged errors)
[2025-10-03 19:32:59] 2025-10-04 02:32:27,990 | INFO     | overall cleanup function is called
[2025-10-03 19:32:59] 2025-10-04 02:32:28,996 | INFO     | --- collectZombieJob: --- 10, [3310938]
[2025-10-03 19:32:59] 2025-10-04 02:32:28,997 | INFO     | zombie collector waiting for pid 3310938
[2025-10-03 19:32:59] 2025-10-04 02:32:28,997 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-03 19:32:59] 2025-10-04 02:32:28,997 | INFO     | collected zombie processes
[2025-10-03 19:32:59] 2025-10-04 02:32:28,997 | INFO     | will attempt to kill all subprocesses of pid=3310938
[2025-10-03 19:32:59] 2025-10-04 02:32:29,174 | INFO     | process IDs to be killed: [3310938] (in reverse order)
[2025-10-03 19:32:59] 2025-10-04 02:32:29,243 | WARNING  | found no corresponding commands to process id(s)
[2025-10-03 19:32:59] 2025-10-04 02:32:29,243 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-03 19:32:59] 2025-10-04 02:32:29,251 | INFO     | did not find any defunct processes belonging to 3310938
[2025-10-03 19:32:59] 2025-10-04 02:32:29,258 | INFO     | did not find any defunct processes belonging to 3310938
[2025-10-03 19:32:59] 2025-10-04 02:32:29,258 | INFO     | ready for new job
[2025-10-03 19:32:59] 2025-10-04 02:32:29,258 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-03 19:32:59] 2025-10-04 02:32:29,260 | INFO     | ***************************************
[2025-10-03 19:32:59] 2025-10-04 02:32:29,260 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-03 19:32:59] 2025-10-04 02:32:29,260 | INFO     | ***************************************
[2025-10-03 19:32:59] 2025-10-04 02:32:29,260 | INFO     | 
[2025-10-03 19:32:59] 2025-10-04 02:32:29,262 | INFO     | architecture information:
[2025-10-03 19:32:59] 2025-10-04 02:32:29,262 | INFO     | executing command: cat /etc/os-release
[2025-10-03 19:32:59] 2025-10-04 02:32:29,272 | INFO     | cat /etc/os-release:
[2025-10-03 19:32:59] NAME="CentOS Linux"
[2025-10-03 19:32:59] VERSION="7 (Core)"
[2025-10-03 19:32:59] ID="centos"
[2025-10-03 19:32:59] ID_LIKE="rhel fedora"
[2025-10-03 19:32:59] VERSION_ID="7"
[2025-10-03 19:32:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-03 19:32:59] ANSI_COLOR="0;31"
[2025-10-03 19:32:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-03 19:32:59] HOME_URL="https://www.centos.org/"
[2025-10-03 19:32:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-03 19:32:59] 
[2025-10-03 19:32:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-03 19:32:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-03 19:32:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-03 19:32:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-03 19:32:59] 
[2025-10-03 19:32:59] 2025-10-04 02:32:29,273 | INFO     | ***************************************
[2025-10-03 19:32:59] 2025-10-04 02:32:29,775 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-03 19:32:59] 2025-10-04 02:32:29,787 | INFO     | sufficient remaining disk space (1623387537408 B)
[2025-10-03 19:32:59] 2025-10-04 02:32:29,787 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-03 19:32:59] 2025-10-04 02:32:29,787 | INFO     | current server update state: UPDATING_FINAL
[2025-10-03 19:32:59] 2025-10-04 02:32:29,788 | INFO     | update_server=False
[2025-10-03 19:32:59] 2025-10-04 02:32:29,788 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-03 19:32:59] 2025-10-04 02:32:29,788 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-03 19:32:59] 2025-10-04 02:32:29,851 | INFO     | all job control threads have been joined
[2025-10-03 19:32:59] 2025-10-04 02:32:30,136 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-03 19:32:59] 2025-10-04 02:32:30,136 | INFO     | aborting loop
[2025-10-03 19:32:59] 2025-10-04 02:32:30,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-03 19:32:59] 2025-10-04 02:32:30,503 | INFO     | all payload control threads have been joined
[2025-10-03 19:32:59] 2025-10-04 02:32:30,611 | INFO     | all data control threads have been joined
[2025-10-03 19:32:59] 2025-10-04 02:32:30,791 | INFO     | [job] retrieve thread has finished
[2025-10-03 19:32:59] 2025-10-04 02:32:30,793 | INFO     | [job] queue monitor thread has finished
[2025-10-03 19:32:59] 2025-10-04 02:32:30,856 | INFO     | [job] control thread has finished
[2025-10-03 19:32:59] 2025-10-04 02:32:30,926 | INFO     | [payload] execute_payloads thread has finished
[2025-10-03 19:32:59] 2025-10-04 02:32:31,073 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-03 19:32:59] 2025-10-04 02:32:31,141 | INFO     | [job] job monitor thread has finished
[2025-10-03 19:32:59] 2025-10-04 02:32:31,160 | INFO     | [data] copytool_in thread has finished
[2025-10-03 19:32:59] 2025-10-04 02:32:31,271 | INFO     | [payload] failed_post thread has finished
[2025-10-03 19:32:59] 2025-10-04 02:32:31,509 | INFO     | [payload] control thread has finished
[2025-10-03 19:32:59] 2025-10-04 02:32:31,613 | INFO     | [data] control thread has finished
[2025-10-03 19:32:59] 2025-10-04 02:32:31,847 | INFO     | [job] validate thread has finished
[2025-10-03 19:32:59] 2025-10-04 02:32:31,982 | INFO     | [job] create_data_payload thread has finished
[2025-10-03 19:32:59] 2025-10-04 02:32:32,107 | INFO     | [payload] validate_pre thread has finished
[2025-10-03 19:32:59] 2025-10-04 02:32:32,160 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-03 19:32:59] 2025-10-04 02:32:32,214 | INFO     | [data] copytool_out thread has finished
[2025-10-03 19:32:59] 2025-10-04 02:32:32,293 | INFO     | [payload] validate_post thread has finished
[2025-10-03 19:32:59] 2025-10-04 02:32:35,079 | INFO     | [data] queue_monitor thread has finished
[2025-10-03 19:32:59] 2025-10-04 02:32:49,712 | INFO     | [monitor] cgroup control has ended
[2025-10-03 19:32:59] 2025-10-04 02:32:51,337 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140544521004864)>', '<ExcThread(monitor, started 140543996712704)>']
[2025-10-03 19:32:59] 2025-10-04 02:32:56,352 | INFO     | all workflow threads have been joined
[2025-10-03 19:32:59] 2025-10-04 02:32:56,353 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-03 19:32:59] 2025-10-04 02:32:56,353 | INFO     | traces error code: 0
[2025-10-03 19:32:59] 2025-10-04 02:32:56,353 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-03 19:32:59] 2025-10-04 02:32:59,682 | INFO     | PID=3292415 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-03 19:32:59] 2025-10-04 02:32:59,683 | INFO     | .. there are 28 such processes running
[2025-10-03 19:32:59] 2025-10-04 02:32:59,683 | INFO     | found 0 job(s) in 20 queues
[2025-10-03 19:32:59] 2025-10-04 02:32:59,683 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-03 19:32:59] 2025-10-04 02:32:59,684 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-03 19:32:59] 2025-10-04 02:32:59,684 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-03 19:32:59] 2025-10-04 02:32:59,684 | CRITICAL | thread 'MainThread' is not alive
[2025-10-03 19:32:59] 2025-10-04 02:32:59,684 | INFO     | [monitor] control thread has ended
[2025-10-03 19:32:59] 2025-10-04 02:32:59,833 [wrapper] ==== pilot stdout END ====
[2025-10-03 19:32:59] 2025-10-04 02:32:59,835 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-03 19:32:59] 2025-10-04 02:32:59,837 [wrapper] pilotpid: 3292415
[2025-10-03 19:32:59] 2025-10-04 02:32:59,839 [wrapper] Pilot exit status: 0
[2025-10-03 19:32:59] 2025-10-04 02:32:59,846 [wrapper] pandaids: 6828827652
[2025-10-03 19:32:59] 2025-10-04 02:32:59,888 [wrapper] cleanup supervisor_pilot 3292425 3292416
[2025-10-03 19:32:59] 2025-10-04 02:32:59,889 [wrapper] Test setup, not cleaning
[2025-10-03 19:32:59] 2025-10-04 02:32:59,891 [wrapper] apfmon messages muted
[2025-10-03 19:32:59] 2025-10-04 02:32:59,893 [wrapper] ==== wrapper stdout END ====
[2025-10-03 19:32:59] 2025-10-04 02:32:59,895 [wrapper] ==== wrapper stderr END ====
[2025-10-03 19:32:59]  *** Error codes and diagnostics ***
[2025-10-03 19:32:59]     "exeErrorCode": 65,
[2025-10-03 19:32:59]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-03 19:32:59]     "pilotErrorCode": 1305,
[2025-10-03 19:32:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-03 19:32:59]  *** Listing of results directory ***
[2025-10-03 19:32:59] total 212880
[2025-10-03 19:32:59] -rw-r--r--. 1 boinc boinc    552446 Oct  3 14:08 pilot3.tar.gz
[2025-10-03 19:32:59] -rw-r--r--. 1 boinc boinc      5112 Oct  3 14:12 queuedata.json
[2025-10-03 19:32:59] -rwx------. 1 boinc boinc     36292 Oct  3 14:13 runpilot2-wrapper.sh
[2025-10-03 19:32:59] -rw-r--r--. 1 boinc boinc       100 Oct  3 19:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-03 19:32:59] -rwxr-xr-x. 1 boinc boinc      7986 Oct  3 19:29 run_atlas
[2025-10-03 19:32:59] -rw-r--r--. 1 boinc boinc       105 Oct  3 19:29 job.xml
[2025-10-03 19:32:59] -rw-r--r--. 1 boinc boinc      6593 Oct  3 19:29 init_data.xml
[2025-10-03 19:32:59] -rw-r--r--. 2 boinc boinc 213895825 Oct  3 19:29 EVNT.46376901._001624.pool.root.1
[2025-10-03 19:32:59] -rw-r--r--. 2 boinc boinc     15120 Oct  3 19:29 start_atlas.sh
[2025-10-03 19:32:59] drwxrwx--x. 2 boinc boinc      4096 Oct  3 19:29 shared
[2025-10-03 19:32:59] -rw-r--r--. 2 boinc boinc    565602 Oct  3 19:29 input.tar.gz
[2025-10-03 19:32:59] -rw-r--r--. 1 boinc boinc         0 Oct  3 19:29 boinc_lockfile
[2025-10-03 19:32:59] -rw-r--r--. 1 boinc boinc      2519 Oct  3 19:29 pandaJob.out
[2025-10-03 19:32:59] -rw-------. 1 boinc boinc    976004 Oct  3 19:29 agis_schedconf.cvmfs.json
[2025-10-03 19:32:59] -rw-------. 1 boinc boinc   1560401 Oct  3 19:29 agis_ddmendpoints.agis.ALL.json
[2025-10-03 19:32:59] drwx------. 4 boinc boinc      4096 Oct  3 19:29 pilot3
[2025-10-03 19:32:59] -rw-r--r--. 1 boinc boinc       522 Oct  3 19:30 boinc_task_state.xml
[2025-10-03 19:32:59] -rw-------. 1 boinc boinc       973 Oct  3 19:30 memory_monitor_summary.json
[2025-10-03 19:32:59] -rw-------. 1 boinc boinc     20895 Oct  3 19:30 log.46376905._046446.job.log.tgz.1
[2025-10-03 19:32:59] -rw-------. 1 boinc boinc      8408 Oct  3 19:32 heartbeat.json
[2025-10-03 19:32:59] -rw-r--r--. 1 boinc boinc      8192 Oct  3 19:32 boinc_mmap_file
[2025-10-03 19:32:59] -rw-r--r--. 1 boinc boinc        22 Oct  3 19:32 wrapper_checkpoint.txt
[2025-10-03 19:32:59] -rw-------. 1 boinc boinc        95 Oct  3 19:32 pilot_heartbeat.json
[2025-10-03 19:32:59] -rw-------. 1 boinc boinc       893 Oct  3 19:32 pilotlog.txt
[2025-10-03 19:32:59] -rw-------. 1 boinc boinc     82060 Oct  3 19:32 log.46376905._046446.job.log.1
[2025-10-03 19:32:59] -rw-------. 1 boinc boinc       188 Oct  3 19:32 output.list
[2025-10-03 19:32:59] -rw-r--r--. 1 boinc boinc       620 Oct  3 19:32 runtime_log
[2025-10-03 19:32:59] -rw-------. 1 boinc boinc    122880 Oct  3 19:32 result.tar.gz
[2025-10-03 19:32:59] -rw-r--r--. 1 boinc boinc      8528 Oct  3 19:32 runtime_log.err
[2025-10-03 19:32:59] -rw-------. 1 boinc boinc       644 Oct  3 19:32 PyuNDmQG2O8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmF7INDmXm4VZn.diag
[2025-10-03 19:32:59] -rw-r--r--. 1 boinc boinc     21611 Oct  3 19:32 stderr.txt
[2025-10-03 19:32:59] No HITS result produced
[2025-10-03 19:32:59]  *** Contents of shared directory: ***
[2025-10-03 19:32:59] total 209580
[2025-10-03 19:32:59] -rw-r--r--. 2 boinc boinc 213895825 Oct  3 19:29 ATLAS.root_0
[2025-10-03 19:32:59] -rw-r--r--. 2 boinc boinc     15120 Oct  3 19:29 start_atlas.sh
[2025-10-03 19:32:59] -rw-r--r--. 2 boinc boinc    565602 Oct  3 19:29 input.tar.gz
[2025-10-03 19:32:59] -rw-------. 1 boinc boinc    122880 Oct  3 19:32 result.tar.gz
19:33:01 (3286857): run_atlas exited; CPU time 20.683862
19:33:01 (3286857): called boinc_finish(0)

</stderr_txt>
]]>

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