Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:09:02 (1555145): wrapper (7.7.26015): starting
10:09:02 (1555145): wrapper: running run_atlas (--nthreads 4)
[2025-10-04 10:09:02] Arguments: --nthreads 4
[2025-10-04 10:09:02] Threads: 4
[2025-10-04 10:09:02] Checking for CVMFS
[2025-10-04 10:09:02] No cvmfs_config command found, will try listing directly
[2025-10-04 10:09:02] CVMFS is ok
[2025-10-04 10:09:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-04 10:09:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-04 10:09:02] Further information can be found at the LHC@home message board.
[2025-10-04 10:09:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-04 10:09:02] Checking for apptainer binary...
[2025-10-04 10:09:02] which: no apptainer in ((null))
[2025-10-04 10:09:02] apptainer is not installed, using version from CVMFS
[2025-10-04 10:09:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-04 10:09:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-10-04 10:09:02] apptainer works
[2025-10-04 10:09:02] Set ATHENA_PROC_NUMBER=4
[2025-10-04 10:09:02] Set ATHENA_CORE_NUMBER=4
[2025-10-04 10:09:02] Starting ATLAS job with PandaID=6828640461
[2025-10-04 10:09:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-04 13:13:14]  *** The last 200 lines of the pilot log: ***
[2025-10-04 13:13:14] 2025-10-04 11:10:42,437 | INFO     | intersect: -2935639009.135796
[2025-10-04 13:13:14] 2025-10-04 11:10:42,437 | INFO     | chi2: 0.00048748056820792005
[2025-10-04 13:13:14] 2025-10-04 11:10:42,437 | INFO     | current chi2=0.00048748056820792005 (change=70.9951794560256 %)
[2025-10-04 13:13:14] 2025-10-04 11:10:42,437 | INFO     | sum of square deviations: 1342841922.0
[2025-10-04 13:13:14] 2025-10-04 11:10:42,438 | INFO     | sum of deviations: 1848929520.0
[2025-10-04 13:13:14] 2025-10-04 11:10:42,438 | INFO     | mean x: 1759571247.0
[2025-10-04 13:13:14] 2025-10-04 11:10:42,438 | INFO     | mean y: 2326191.2576687117
[2025-10-04 13:13:14] 2025-10-04 11:10:42,439 | INFO     | -- intersect: -2420388774.533749
[2025-10-04 13:13:14] 2025-10-04 11:10:42,439 | INFO     | intersect: -2420388774.533749
[2025-10-04 13:13:14] 2025-10-04 11:10:42,439 | INFO     | chi2: 0.0002118753300199705
[2025-10-04 13:13:14] 2025-10-04 11:10:42,439 | INFO     | current chi2=0.0002118753300199705 (change=56.53666138962866 %)
[2025-10-04 13:13:14] 2025-10-04 11:10:42,439 | INFO     | sum of square deviations: 1223016419.5
[2025-10-04 13:13:14] 2025-10-04 11:10:42,440 | INFO     | sum of deviations: 1459691600.4999998
[2025-10-04 13:13:14] 2025-10-04 11:10:42,441 | INFO     | mean x: 1759571399.5
[2025-10-04 13:13:14] 2025-10-04 11:10:42,441 | INFO     | mean y: 2326685.5379746836
[2025-10-04 13:13:14] 2025-10-04 11:10:42,441 | INFO     | -- intersect: -2097752717.6316242
[2025-10-04 13:13:14] 2025-10-04 11:10:42,441 | INFO     | intersect: -2097752717.6316242
[2025-10-04 13:13:14] 2025-10-04 11:10:42,441 | INFO     | chi2: 0.00012086290443695223
[2025-10-04 13:13:14] 2025-10-04 11:10:42,441 | INFO     | current chi2=0.00012086290443695223 (change=42.95565018090583 %)
[2025-10-04 13:13:14] 2025-10-04 11:10:42,442 | INFO     | sum of square deviations: 1110539892.0
[2025-10-04 13:13:14] 2025-10-04 11:10:42,442 | INFO     | sum of deviations: 1184427239.9999998
[2025-10-04 13:13:14] 2025-10-04 11:10:42,443 | INFO     | mean x: 1759571552.0
[2025-10-04 13:13:14] 2025-10-04 11:10:42,443 | INFO     | mean y: 2327058.1503267973
[2025-10-04 13:13:14] 2025-10-04 11:10:42,443 | INFO     | -- intersect: -1874313746.8590226
[2025-10-04 13:13:14] 2025-10-04 11:10:42,443 | INFO     | intersect: -1874313746.8590226
[2025-10-04 13:13:14] 2025-10-04 11:10:42,443 | INFO     | chi2: 8.30360646303446e-05
[2025-10-04 13:13:14] 2025-10-04 11:10:42,443 | INFO     | current chi2=8.30360646303446e-05 (change=31.297311596826543 %)
[2025-10-04 13:13:14] 2025-10-04 11:10:42,444 | INFO     | sum of square deviations: 1005179777.0
[2025-10-04 13:13:14] 2025-10-04 11:10:42,444 | INFO     | sum of deviations: 962284760.0
[2025-10-04 13:13:14] 2025-10-04 11:10:42,445 | INFO     | mean x: 1759571704.5
[2025-10-04 13:13:14] 2025-10-04 11:10:42,445 | INFO     | mean y: 2327379.608108108
[2025-10-04 13:13:14] 2025-10-04 11:10:42,445 | INFO     | -- intersect: -1682156405.3930435
[2025-10-04 13:13:14] 2025-10-04 11:10:42,445 | INFO     | intersect: -1682156405.3930435
[2025-10-04 13:13:14] 2025-10-04 11:10:42,445 | INFO     | chi2: 5.9484350803506125e-05
[2025-10-04 13:13:14] 2025-10-04 11:10:42,445 | INFO     | current chi2=5.9484350803506125e-05 (change=28.36323461580784 %)
[2025-10-04 13:13:14] 2025-10-04 11:10:42,446 | INFO     | sum of square deviations: 906703512.0
[2025-10-04 13:13:14] 2025-10-04 11:10:42,446 | INFO     | sum of deviations: 800864120.0
[2025-10-04 13:13:14] 2025-10-04 11:10:42,446 | INFO     | mean x: 1759571857.0
[2025-10-04 13:13:14] 2025-10-04 11:10:42,447 | INFO     | mean y: 2327629.4545454546
[2025-10-04 13:13:14] 2025-10-04 11:10:42,447 | INFO     | -- intersect: -1551849616.120159
[2025-10-04 13:13:14] 2025-10-04 11:10:42,447 | INFO     | intersect: -1551849616.120159
[2025-10-04 13:13:14] 2025-10-04 11:10:42,447 | INFO     | chi2: 4.9991232290473135e-05
[2025-10-04 13:13:14] 2025-10-04 11:10:42,447 | INFO     | current chi2=4.9991232290473135e-05 (change=15.959018438969746 %)
[2025-10-04 13:13:14] 2025-10-04 11:10:42,447 | INFO     | left removable region: 70
[2025-10-04 13:13:14] 2025-10-04 11:10:42,448 | INFO     | sum of square deviations: 329031285.5
[2025-10-04 13:13:14] 2025-10-04 11:10:42,448 | INFO     | sum of deviations: 329618105.5
[2025-10-04 13:13:14] 2025-10-04 11:10:42,448 | INFO     | mean x: 1759572741.5
[2025-10-04 13:13:14] 2025-10-04 11:10:42,448 | INFO     | mean y: 2328120.6764705884
[2025-10-04 13:13:14] 2025-10-04 11:10:42,449 | INFO     | -- intersect: -1760382779.781873
[2025-10-04 13:13:14] 2025-10-04 11:10:42,449 | INFO     | intersect: -1760382779.781873
[2025-10-04 13:13:14] 2025-10-04 11:10:42,449 | INFO     | chi2: 3.3102420516721294e-05
[2025-10-04 13:13:14] 2025-10-04 11:10:42,449 | INFO     | -- intersect: -1760382779.781873
[2025-10-04 13:13:14] 2025-10-04 11:10:42,449 | INFO     | current memory leak: 1.00 B/s (using 102 data points, chi2=0.00)
[2025-10-04 13:13:14] 2025-10-04 11:10:42,450 | INFO     | could have reported an average CPU frequency of 2689 MHz (10 samples)
[2025-10-04 13:13:14] 2025-10-04 11:10:42,450 | INFO     | ..............................
[2025-10-04 13:13:14] 2025-10-04 11:10:42,450 | INFO     | . Timing measurements:
[2025-10-04 13:13:14] 2025-10-04 11:10:42,450 | INFO     | . get job = 0 s
[2025-10-04 13:13:14] 2025-10-04 11:10:42,450 | INFO     | . initial setup = 1 s
[2025-10-04 13:13:14] 2025-10-04 11:10:42,451 | INFO     | . payload setup = 8 s
[2025-10-04 13:13:14] 2025-10-04 11:10:42,451 | INFO     | . stage-in = 0 s
[2025-10-04 13:13:14] 2025-10-04 11:10:42,451 | INFO     | . payload execution = 10837 s
[2025-10-04 13:13:14] 2025-10-04 11:10:42,451 | INFO     | . stage-out = 1 s
[2025-10-04 13:13:14] 2025-10-04 11:10:42,451 | INFO     | . log creation = 0 s
[2025-10-04 13:13:14] 2025-10-04 11:10:42,451 | INFO     | ..............................
[2025-10-04 13:13:14] 2025-10-04 11:10:42,543 | INFO     | 
[2025-10-04 13:13:14] 2025-10-04 11:10:42,544 | INFO     | job summary report
[2025-10-04 13:13:14] 2025-10-04 11:10:42,544 | INFO     | --------------------------------------------------
[2025-10-04 13:13:14] 2025-10-04 11:10:42,544 | INFO     | PanDA job id: 6828640461
[2025-10-04 13:13:14] 2025-10-04 11:10:42,544 | INFO     | task id: 46376994
[2025-10-04 13:13:14] 2025-10-04 11:10:42,544 | INFO     | errors: (none)
[2025-10-04 13:13:14] 2025-10-04 11:10:42,544 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-04 13:13:14] 2025-10-04 11:10:42,544 | INFO     | pilot state: finished 
[2025-10-04 13:13:14] 2025-10-04 11:10:42,544 | INFO     | transexitcode: 0
[2025-10-04 13:13:14] 2025-10-04 11:10:42,544 | INFO     | exeerrorcode: 0
[2025-10-04 13:13:14] 2025-10-04 11:10:42,544 | INFO     | exeerrordiag: 
[2025-10-04 13:13:14] 2025-10-04 11:10:42,544 | INFO     | exitcode: 0
[2025-10-04 13:13:14] 2025-10-04 11:10:42,545 | INFO     | exitmsg: OK
[2025-10-04 13:13:14] 2025-10-04 11:10:42,545 | INFO     | cpuconsumptiontime: 41539 s
[2025-10-04 13:13:14] 2025-10-04 11:10:42,545 | INFO     | nevents: 400
[2025-10-04 13:13:14] 2025-10-04 11:10:42,545 | INFO     | neventsw: 0
[2025-10-04 13:13:14] 2025-10-04 11:10:42,545 | INFO     | pid: 1566414
[2025-10-04 13:13:14] 2025-10-04 11:10:42,545 | INFO     | pgrp: 1566414
[2025-10-04 13:13:14] 2025-10-04 11:10:42,545 | INFO     | corecount: 4
[2025-10-04 13:13:14] 2025-10-04 11:10:42,545 | INFO     | event service: False
[2025-10-04 13:13:14] 2025-10-04 11:10:42,545 | INFO     | sizes: {0: 2348881, 7: 2349143, 11: 2349171, 10856: 2378588, 10857: 2378845, 10859: 2387921, 10860: 2388105, 10868: 2388129}
[2025-10-04 13:13:14] 2025-10-04 11:10:42,545 | INFO     | --------------------------------------------------
[2025-10-04 13:13:14] 2025-10-04 11:10:42,545 | INFO     | 
[2025-10-04 13:13:14] 2025-10-04 11:10:42,545 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2025-10-04 13:13:14] 2025-10-04 11:10:42,556 | INFO     | time since job start (10885s) is within the limit (172800.0s)
[2025-10-04 13:13:14] 2025-10-04 11:10:42,582 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-04 13:13:14] 2025-10-04 11:10:42,582 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-04 13:13:14] 2025-10-04 11:10:42,582 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-04 13:13:14] 2025-10-04 11:10:42,582 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-04 13:13:14] 2025-10-04 11:10:42,583 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-04 13:13:14] 2025-10-04 11:10:42,583 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-04 13:13:14] 2025-10-04 11:10:42,583 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-04 13:13:14] 2025-10-04 11:10:42,583 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-04 13:13:14] 2025-10-04 11:10:42,583 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-04 13:13:14] 2025-10-04 11:10:42,583 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-04 13:13:14] 2025-10-04 11:10:42,583 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-04 13:13:14] 2025-10-04 11:10:42,583 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-04 13:13:14] 2025-10-04 11:10:42,583 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-04 13:13:14] 2025-10-04 11:10:42,583 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-04 13:13:14] 2025-10-04 11:10:42,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-04 13:13:14] 2025-10-04 11:10:42,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-04 13:13:14] 2025-10-04 11:10:42,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-04 13:13:14] 2025-10-04 11:10:42,584 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-04 13:13:14] 2025-10-04 11:10:42,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-04 13:13:14] 2025-10-04 11:10:42,584 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-04 13:13:14] 2025-10-04 11:10:42,584 | INFO     | job 6828640461 has completed (purged errors)
[2025-10-04 13:13:14] 2025-10-04 11:10:42,585 | INFO     | overall cleanup function is called
[2025-10-04 13:13:14] 2025-10-04 11:10:43,594 | INFO     | --- collectZombieJob: --- 10, [1566414]
[2025-10-04 13:13:14] 2025-10-04 11:10:43,594 | INFO     | zombie collector waiting for pid 1566414
[2025-10-04 13:13:14] 2025-10-04 11:10:43,594 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-04 13:13:14] 2025-10-04 11:10:43,594 | INFO     | collected zombie processes
[2025-10-04 13:13:14] 2025-10-04 11:10:43,595 | INFO     | will attempt to kill all subprocesses of pid=1566414
[2025-10-04 13:13:14] 2025-10-04 11:10:44,370 | INFO     | process IDs to be killed: [1566414] (in reverse order)
[2025-10-04 13:13:14] 2025-10-04 11:10:44,668 | WARNING  | found no corresponding commands to process id(s)
[2025-10-04 13:13:14] 2025-10-04 11:10:44,668 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-04 13:13:14] 2025-10-04 11:10:44,704 | INFO     | did not find any defunct processes belonging to 1566414
[2025-10-04 13:13:14] 2025-10-04 11:10:44,735 | INFO     | did not find any defunct processes belonging to 1566414
[2025-10-04 13:13:14] 2025-10-04 11:10:44,735 | INFO     | ready for new job
[2025-10-04 13:13:14] 2025-10-04 11:10:44,736 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-04 13:13:14] 2025-10-04 11:10:44,738 | INFO     | ***************************************
[2025-10-04 13:13:14] 2025-10-04 11:10:44,738 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-04 13:13:14] 2025-10-04 11:10:44,739 | INFO     | ***************************************
[2025-10-04 13:13:14] 2025-10-04 11:10:44,739 | INFO     | 
[2025-10-04 13:13:14] 2025-10-04 11:10:44,748 | INFO     | architecture information:
[2025-10-04 13:13:14] 2025-10-04 11:10:44,748 | INFO     | executing command: cat /etc/os-release
[2025-10-04 13:13:14] 2025-10-04 11:10:44,773 | INFO     | cat /etc/os-release:
[2025-10-04 13:13:14] NAME="CentOS Linux"
[2025-10-04 13:13:14] VERSION="7 (Core)"
[2025-10-04 13:13:14] ID="centos"
[2025-10-04 13:13:14] ID_LIKE="rhel fedora"
[2025-10-04 13:13:14] VERSION_ID="7"
[2025-10-04 13:13:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-04 13:13:14] ANSI_COLOR="0;31"
[2025-10-04 13:13:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-04 13:13:14] HOME_URL="https://www.centos.org/"
[2025-10-04 13:13:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-04 13:13:14] 
[2025-10-04 13:13:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-04 13:13:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-04 13:13:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-04 13:13:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-04 13:13:14] 
[2025-10-04 13:13:14] 2025-10-04 11:10:44,773 | INFO     | ***************************************
[2025-10-04 13:13:14] 2025-10-04 11:10:45,277 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2025-10-04 13:13:14] 2025-10-04 11:10:45,301 | INFO     | sufficient remaining disk space (3340169641984 B)
[2025-10-04 13:13:14] 2025-10-04 11:10:45,302 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-04 13:13:14] 2025-10-04 11:10:45,302 | INFO     | current server update state: UPDATING_FINAL
[2025-10-04 13:13:14] 2025-10-04 11:10:45,302 | INFO     | update_server=False
[2025-10-04 13:13:14] 2025-10-04 11:10:45,302 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-04 13:13:14] 2025-10-04 11:10:45,303 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-04 13:13:14] 2025-10-04 11:10:45,303 | INFO     | aborting loop
[2025-10-04 13:13:14] 2025-10-04 11:10:45,466 | INFO     | all data control threads have been joined
[2025-10-04 13:13:14] 2025-10-04 11:10:45,624 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-04 13:13:14] 2025-10-04 11:10:46,307 | INFO     | [job] retrieve thread has finished
[2025-10-04 13:13:14] 2025-10-04 11:10:46,308 | INFO     | [job] job monitor thread has finished
[2025-10-04 13:13:14] 2025-10-04 11:10:46,313 | INFO     | all payload control threads have been joined
[2025-10-04 13:13:14] 2025-10-04 11:10:46,470 | INFO     | [data] control thread has finished
[2025-10-04 13:13:14] 2025-10-04 11:10:46,477 | INFO     | [payload] validate_pre thread has finished
[2025-10-04 13:13:14] 2025-10-04 11:10:46,634 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-04 13:13:14] 2025-10-04 11:10:46,682 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-04 13:13:14] 2025-10-04 11:10:46,971 | INFO     | all job control threads have been joined
[2025-10-04 13:13:14] 2025-10-04 11:10:47,071 | INFO     | [data] copytool_in thread has finished
[2025-10-04 13:13:14] 2025-10-04 11:10:47,148 | INFO     | [payload] execute_payloads thread has finished
[2025-10-04 13:13:14] 2025-10-04 11:10:47,179 | INFO     | [job] validate thread has finished
[2025-10-04 13:13:14] 2025-10-04 11:10:47,215 | INFO     | [payload] validate_post thread has finished
[2025-10-04 13:13:14] 2025-10-04 11:10:47,290 | INFO     | [job] create_data_payload thread has finished
[2025-10-04 13:13:14] 2025-10-04 11:10:47,318 | INFO     | [payload] control thread has finished
[2025-10-04 13:13:14] 2025-10-04 11:10:47,418 | INFO     | [payload] failed_post thread has finished
[2025-10-04 13:13:14] 2025-10-04 11:10:47,554 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-04 13:13:14] 2025-10-04 11:10:47,977 | INFO     | [job] control thread has finished
[2025-10-04 13:13:14] 2025-10-04 11:10:48,559 | INFO     | [job] queue monitor thread has finished
[2025-10-04 13:13:14] 2025-10-04 11:10:48,687 | INFO     | [data] copytool_out thread has finished
[2025-10-04 13:13:14] 2025-10-04 11:10:49,630 | INFO     | [data] queue_monitor thread has finished
[2025-10-04 13:13:14] 2025-10-04 11:11:16,386 | INFO     | PID=1559141 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-04 13:13:14] 2025-10-04 11:11:16,386 | INFO     | .. there are 21 such processes running
[2025-10-04 13:13:14] 2025-10-04 11:11:16,387 | INFO     | found 0 job(s) in 20 queues
[2025-10-04 13:13:14] 2025-10-04 11:11:16,387 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-04 13:13:14] 2025-10-04 11:11:16,387 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-04 13:13:14] 2025-10-04 11:11:34,714 | INFO     | [monitor] cgroup control has ended
[2025-10-04 13:13:14] 2025-10-04 11:11:35,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22602203895616)>', '<ExcThread(monitor, started 22601965467392)>']
[2025-10-04 13:13:14] 2025-10-04 11:11:36,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-04 13:13:14] 2025-10-04 11:11:36,494 | INFO     | [monitor] control thread has ended
[2025-10-04 13:13:14] 2025-10-04 11:11:40,619 | INFO     | all workflow threads have been joined
[2025-10-04 13:13:14] 2025-10-04 11:11:40,619 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-04 13:13:14] 2025-10-04 11:11:40,619 | INFO     | traces error code: 0
[2025-10-04 13:13:14] 2025-10-04 11:11:40,619 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-04 13:13:14] 2025-10-04 11:11:40,765 [wrapper] ==== pilot stdout END ====
[2025-10-04 13:13:14] 2025-10-04 11:11:40,769 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-04 13:13:14] 2025-10-04 11:11:40,774 [wrapper] pilotpid: 1559141
[2025-10-04 13:13:14] 2025-10-04 11:11:40,777 [wrapper] Pilot exit status: 0
[2025-10-04 13:13:14] 2025-10-04 11:11:40,794 [wrapper] pandaids: 6828640461
[2025-10-04 13:13:14] 2025-10-04 11:11:40,952 [wrapper] cleanup supervisor_pilot 2288265 1559142
[2025-10-04 13:13:14] 2025-10-04 11:11:40,957 [wrapper] Test setup, not cleaning
[2025-10-04 13:13:14] 2025-10-04 11:11:40,961 [wrapper] apfmon messages muted
[2025-10-04 13:13:14] 2025-10-04 11:11:40,966 [wrapper] ==== wrapper stdout END ====
[2025-10-04 13:13:14] 2025-10-04 11:11:40,970 [wrapper] ==== wrapper stderr END ====
[2025-10-04 13:13:14]  *** Error codes and diagnostics ***
[2025-10-04 13:13:14]     "exeErrorCode": 0,
[2025-10-04 13:13:14]     "exeErrorDiag": "",
[2025-10-04 13:13:14]     "pilotErrorCode": 0,
[2025-10-04 13:13:14]     "pilotErrorDiag": "",
[2025-10-04 13:13:14]  *** Listing of results directory ***
[2025-10-04 13:13:14] total 422228
[2025-10-04 13:13:14] -rw-r--r-- 1 boinc boinc    552446 Oct  3 20:46 pilot3.tar.gz
[2025-10-04 13:13:14] -rw-r--r-- 1 boinc boinc      5112 Oct  3 21:03 queuedata.json
[2025-10-04 13:13:14] -rwx------ 1 boinc boinc     36292 Oct  3 21:03 runpilot2-wrapper.sh
[2025-10-04 13:13:14] -rw-r--r-- 1 boinc boinc       100 Oct  4 10:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-04 13:13:14] -rwxr-xr-x 1 boinc boinc      7986 Oct  4 10:08 run_atlas
[2025-10-04 13:13:14] -rw-r--r-- 1 boinc boinc       105 Oct  4 10:08 job.xml
[2025-10-04 13:13:14] -rw-r--r-- 1 boinc boinc      6683 Oct  4 10:09 init_data.xml
[2025-10-04 13:13:14] -rw-r--r-- 2 boinc boinc 223774387 Oct  4 10:09 EVNT.46376992._000498.pool.root.1
[2025-10-04 13:13:14] -rw-r--r-- 2 boinc boinc     15120 Oct  4 10:09 start_atlas.sh
[2025-10-04 13:13:14] drwxrwx--x 2 boinc boinc      4096 Oct  4 10:09 shared
[2025-10-04 13:13:14] -rw-r--r-- 2 boinc boinc    565611 Oct  4 10:09 input.tar.gz
[2025-10-04 13:13:14] -rw-r--r-- 1 boinc boinc         0 Oct  4 10:09 boinc_lockfile
[2025-10-04 13:13:14] -rw-r--r-- 1 boinc boinc      2560 Oct  4 10:09 pandaJob.out
[2025-10-04 13:13:14] -rw------- 1 boinc boinc    976032 Oct  4 10:09 agis_schedconf.cvmfs.json
[2025-10-04 13:13:14] drwx------ 4 boinc boinc      4096 Oct  4 10:09 pilot3
[2025-10-04 13:13:14] -rw-r--r-- 1 boinc boinc       529 Oct  4 13:09 boinc_task_state.xml
[2025-10-04 13:13:14] -rw------- 1 boinc boinc 200922384 Oct  4 13:09 HITS.46376994._018110.pool.root.1
[2025-10-04 13:13:14] -rw------- 1 boinc boinc      1025 Oct  4 13:10 memory_monitor_summary.json
[2025-10-04 13:13:14] -rw------- 1 boinc boinc   1560401 Oct  4 13:10 agis_ddmendpoints.agis.ALL.json
[2025-10-04 13:13:14] -rw------- 1 boinc boinc    357925 Oct  4 13:10 log.46376994._018110.job.log.tgz.1
[2025-10-04 13:13:14] -rw------- 1 boinc boinc      7780 Oct  4 13:10 heartbeat.json
[2025-10-04 13:13:14] -rw------- 1 boinc boinc        95 Oct  4 13:11 pilot_heartbeat.json
[2025-10-04 13:13:14] -rw------- 1 boinc boinc      4835 Oct  4 13:11 pilotlog.txt
[2025-10-04 13:13:14] -rw------- 1 boinc boinc   1531133 Oct  4 13:11 log.46376994._018110.job.log.1
[2025-10-04 13:13:14] -rw------- 1 boinc boinc       357 Oct  4 13:11 output.list
[2025-10-04 13:13:14] -rw-r--r-- 1 boinc boinc       620 Oct  4 13:11 runtime_log
[2025-10-04 13:13:14] -rw------- 1 boinc boinc   1904640 Oct  4 13:11 result.tar.gz
[2025-10-04 13:13:14] -rw-r--r-- 1 boinc boinc      9070 Oct  4 13:11 runtime_log.err
[2025-10-04 13:13:14] -rw------- 1 boinc boinc       665 Oct  4 13:11 Ze4NDmGF0O8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGjINDm6hi3Ho.diag
[2025-10-04 13:13:14] -rw-r--r-- 1 boinc boinc        27 Oct  4 13:12 wrapper_checkpoint.txt
[2025-10-04 13:13:14] -rw-r--r-- 1 boinc boinc      8192 Oct  4 13:13 boinc_mmap_file
[2025-10-04 13:13:14] -rw-r--r-- 1 boinc boinc     20782 Oct  4 13:13 stderr.txt
[2025-10-04 13:13:14] HITS file was successfully produced:
[2025-10-04 13:13:14] -rw------- 1 boinc boinc 200922384 Oct  4 13:09 shared/HITS.pool.root.1
[2025-10-04 13:13:14]  *** Contents of shared directory: ***
[2025-10-04 13:13:14] total 417188
[2025-10-04 13:13:14] -rw-r--r-- 2 boinc boinc 223774387 Oct  4 10:09 ATLAS.root_0
[2025-10-04 13:13:14] -rw-r--r-- 2 boinc boinc     15120 Oct  4 10:09 start_atlas.sh
[2025-10-04 13:13:14] -rw-r--r-- 2 boinc boinc    565611 Oct  4 10:09 input.tar.gz
[2025-10-04 13:13:14] -rw------- 1 boinc boinc 200922384 Oct  4 13:09 HITS.pool.root.1
[2025-10-04 13:13:14] -rw------- 1 boinc boinc   1904640 Oct  4 13:11 result.tar.gz
13:13:15 (1555145): run_atlas exited; CPU time 42204.824645
13:13:15 (1555145): called boinc_finish(0)

</stderr_txt>
]]>

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