Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-09 23:52:05 (26332): vboxwrapper version 26210
2025-10-09 23:52:05 (26332): BOINC client version: 8.0.2
2025-10-09 23:52:06 (26332): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-10-09 23:52:06 (26332): Successfully copied 'init_data.xml' to the shared directory.
2025-10-09 23:52:06 (26332): Create VM. (boinc_46094c2f31ce1158, slot#5)
2025-10-09 23:52:07 (26332): Setting Memory Size for VM. (4800MB)
2025-10-09 23:52:07 (26332): Setting CPU Count for VM. (8)
2025-10-09 23:52:08 (26332): Setting Chipset Options for VM.
2025-10-09 23:52:08 (26332): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-09 23:52:08 (26332): Setting Boot Options for VM.
2025-10-09 23:52:09 (26332): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-09 23:52:09 (26332): Enabling VM Network Access.
2025-10-09 23:52:10 (26332): Disabling USB Support for VM.
2025-10-09 23:52:10 (26332): Disabling COM Port Support for VM.
2025-10-09 23:52:10 (26332): Disabling LPT Port Support for VM.
2025-10-09 23:52:11 (26332): Disabling Audio Support for VM.
2025-10-09 23:52:11 (26332): Disabling Clipboard Support for VM.
2025-10-09 23:52:11 (26332): Disabling Drag and Drop Support for VM.
2025-10-09 23:52:12 (26332): Adding storage controller(s) to VM.
2025-10-09 23:52:12 (26332): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-09 23:52:13 (26332): Adding VirtualBox Guest Additions to VM.
2025-10-09 23:52:13 (26332): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-09 23:52:13 (26332): forwarding host port 60490 to guest port 80
2025-10-09 23:52:13 (26332): Enabling remote desktop for VM.
2025-10-09 23:52:14 (26332): Required extension pack not installed, remote desktop not enabled.
2025-10-09 23:52:14 (26332): Enabling shared directory for VM.
2025-10-09 23:52:14 (26332): Starting VM using VBoxManage interface. (boinc_46094c2f31ce1158, slot#5)
2025-10-09 23:52:23 (26332): Successfully started VM. (PID = '25016')
2025-10-09 23:52:23 (26332): Reporting VM Process ID to BOINC.
2025-10-09 23:52:23 (26332): Guest Log: BIOS: VirtualBox 7.1.4
2025-10-09 23:52:23 (26332): Guest Log: CPUID EDX: 0x178bfbff
2025-10-09 23:52:23 (26332): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-09 23:52:23 (26332): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-09 23:52:23 (26332): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-09 23:52:23 (26332): Detected: Web Application Enabled (http://localhost:60490)
2025-10-09 23:52:23 (26332): Preference change detected
2025-10-09 23:52:23 (26332): Setting CPU throttle for VM. (100%)
2025-10-09 23:52:24 (26332): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-09 23:52:25 (26332): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-09 23:52:25 (26332): Guest Log: BIOS: Booting from Hard Disk...
2025-10-09 23:52:28 (26332): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-09 23:52:28 (26332): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-09 23:52:28 (26332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-09 23:52:37 (26332): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-09 23:52:37 (26332): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-09 23:52:48 (26332): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-09 23:52:48 (26332): Guest Log: 00:00:00.000520 main     Log opened 2025-10-09T23:52:47.188655000Z
2025-10-09 23:52:48 (26332): Guest Log: 00:00:00.000855 main     OS Product: Linux
2025-10-09 23:52:48 (26332): Guest Log: 00:00:00.000978 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-09 23:52:48 (26332): Guest Log: 00:00:00.001055 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-09 23:52:48 (26332): Guest Log: 00:00:00.001125 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-09 23:52:48 (26332): Guest Log: 00:00:00.001127 main     Process ID: 1379
2025-10-09 23:52:48 (26332): Guest Log: 00:00:00.001128 main     Package type: LINUX_64BITS_GENERIC
2025-10-09 23:52:48 (26332): Guest Log: 00:00:00.003404 main     5.2.32 r132073 started. Verbose level = 0
2025-10-09 23:52:49 (26332): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-09 23:52:49 (26332): Guest Log: [INFO] Mounting shared directory
2025-10-09 23:52:49 (26332): Guest Log: [INFO] Checking for init_data.xml
2025-10-09 23:52:55 (26332): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-09 23:52:55 (26332): Guest Log: [INFO] Detected branch: prod
2025-10-09 23:52:56 (26332): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-09 23:52:56 (26332): Guest Log: Copying input files
2025-10-09 23:52:58 (26332): Guest Log: 00:00:10.007510 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 537 619 000ns (GuestNow=1 760 046 778 657 447 000 ns GuestLast=1 760 053 967 195 066 000 ns fSetTimeLastLoop=true )
2025-10-09 23:52:59 (26332): Guest Log: Copied input files into RunAtlas.
2025-10-09 23:52:59 (26332): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-09 23:52:59 (26332): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-09 23:52:59 (26332): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-09 23:52:59 (26332): Guest Log: Further information can be found at the LHC@home message board.
2025-10-09 23:53:09 (26332): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-09 23:53:09 (26332): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-09 23:53:09 (26332): Guest Log: 2.6.3.0 1656 0 30184 151524 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-09 23:53:11 (26332): Guest Log: copied the webapp to /var/www
2025-10-09 23:53:11 (26332): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-09 23:53:11 (26332): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-09 23:53:11 (26332): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-09 23:53:11 (26332): Guest Log:  *** Starting ATLAS job. (PandaID=6827990350 taskID=46376905) ***
2025-10-10 01:32:31 (26332): Status Report: Elapsed Time: '6000.000000'
2025-10-10 01:32:31 (26332): Status Report: CPU Time: '41851.625000'
2025-10-10 03:12:39 (26332): Status Report: Elapsed Time: '12000.000000'
2025-10-10 03:12:39 (26332): Status Report: CPU Time: '89403.921875'
2025-10-10 03:23:53 (26332): Guest Log:  *** Job finished ***
2025-10-10 03:23:53 (26332): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:43,455 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:43,455 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:46,634 | INFO     | [monitor] cgroup control has ended
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:47,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139736151095104)>', '<ExcThread(monitor, started 139735410403072)>']
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:47,551 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:47,552 | INFO     | [monitor] control thread has ended
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:52,253 | INFO     | all workflow threads have been joined
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:52,254 | INFO     | end of generic workflow (traces error code: 0)
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:52,255 | INFO     | traces error code: 0
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:52,255 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:52,407 [wrapper] ==== pilot stdout END ====
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:52,420 [wrapper] ==== wrapper stdout RESUME ====
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:52,432 [wrapper] pilotpid: 6101
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:52,443 [wrapper] Pilot exit status: 0
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:52,530 [wrapper] pandaids: 6827990350
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:52,609 [wrapper] cleanup supervisor_pilot 10054 6102
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:52,627 [wrapper] Test setup, not cleaning
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:52,649 [wrapper] apfmon messages muted
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:52,665 [wrapper] ==== wrapper stdout END ====
2025-10-10 03:23:53 (26332): Guest Log: 2025-10-10 01:23:52,678 [wrapper] ==== wrapper stderr END ====
2025-10-10 03:23:53 (26332): Guest Log:  *** Error codes and diagnostics ***
2025-10-10 03:23:53 (26332): Guest Log:     "exeErrorCode": 0,
2025-10-10 03:23:53 (26332): Guest Log:     "exeErrorDiag": "",
2025-10-10 03:23:53 (26332): Guest Log:     "pilotErrorCode": 0,
2025-10-10 03:23:53 (26332): Guest Log:     "pilotErrorDiag": "",
2025-10-10 03:23:53 (26332): Guest Log:  *** Listing of results directory ***
2025-10-10 03:23:53 (26332): Guest Log: total 185768
2025-10-10 03:23:53 (26332): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  3 05:35 pilot3.tar.gz
2025-10-10 03:23:53 (26332): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  3 05:52 queuedata.json
2025-10-10 03:23:53 (26332): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  3 05:53 runpilot2-wrapper.sh
2025-10-10 03:23:53 (26332): Guest Log: -rwxr-xr-x. 1 atlas atlas      9697 Oct  9 21:52 init_data.xml
2025-10-10 03:23:53 (26332): Guest Log: -rwxr-xr-x. 1 atlas atlas    565604 Oct  9 21:52 input.tar.gz
2025-10-10 03:23:53 (26332): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct  9 21:52 start_atlas.sh
2025-10-10 03:23:53 (26332): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  9 21:52 EVNT.46376901._001297.pool.root.1 -> /data/./ATLAS.root_0
2025-10-10 03:23:53 (26332): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Oct  9 21:53 pandaJob.out
2025-10-10 03:23:53 (26332): Guest Log: -rw-------. 1 atlas atlas    975454 Oct  9 21:54 agis_schedconf.cvmfs.json
2025-10-10 03:23:53 (26332): Guest Log: drwx------. 4 atlas atlas      4096 Oct  9 21:54 pilot3
2025-10-10 03:23:53 (26332): Guest Log: -rw-------. 1 atlas atlas 182310614 Oct 10 01:22 HITS.46376905._038266.pool.root.1
2025-10-10 03:23:53 (26332): Guest Log: -rw-------. 1 atlas atlas      1023 Oct 10 01:22 memory_monitor_summary.json
2025-10-10 03:23:53 (26332): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 10 01:22 agis_ddmendpoints.agis.ALL.json
2025-10-10 03:23:53 (26332): Guest Log: -rw-------. 1 atlas atlas    433256 Oct 10 01:22 log.46376905._038266.job.log.tgz.1
2025-10-10 03:23:53 (26332): Guest Log: -rw-------. 1 atlas atlas      7764 Oct 10 01:23 heartbeat.json
2025-10-10 03:23:53 (26332): Guest Log: -rw-------. 1 atlas atlas        95 Oct 10 01:23 pilot_heartbeat.json
2025-10-10 03:23:53 (26332): Guest Log: -rw-------. 1 atlas atlas      4877 Oct 10 01:23 pilotlog.txt
2025-10-10 03:23:53 (26332): Guest Log: -rw-------. 1 atlas atlas   1611862 Oct 10 01:23 log.46376905._038266.job.log.1
2025-10-10 03:23:53 (26332): Guest Log: -rw-------. 1 atlas atlas       357 Oct 10 01:23 output.list
2025-10-10 03:23:53 (26332): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 10 01:23 runtime_log
2025-10-10 03:23:53 (26332): Guest Log: -rw-------. 1 atlas atlas   2068480 Oct 10 01:23 result.tar.gz
2025-10-10 03:23:53 (26332): Guest Log: -rw-r--r--. 1 atlas atlas      8639 Oct 10 01:23 runtime_log.err
2025-10-10 03:23:53 (26332): Guest Log: -rw-------. 1 atlas atlas       661 Oct 10 01:23 PAWNDmiunO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmn2GNDmAQ9nXo.diag
2025-10-10 03:23:53 (26332): Guest Log: Looking for outputfile HITS.46376905._038266.pool.root.1
2025-10-10 03:23:54 (26332): Guest Log: HITS file was successfully produced
2025-10-10 03:23:54 (26332): Guest Log: -rw-------. 1 atlas atlas 182310614 Oct 10 01:22 /home/atlas/RunAtlas/HITS.46376905._038266.pool.root.1
2025-10-10 03:23:56 (26332): Guest Log: Successfully finished the ATLAS job!
2025-10-10 03:23:56 (26332): Guest Log: Copying the results back to the shared directory!
2025-10-10 03:23:56 (26332): Guest Log:  *** Contents of shared directory: ***
2025-10-10 03:23:56 (26332): Guest Log: total 390596
2025-10-10 03:23:56 (26332): Guest Log: -rwxrwxrwx. 1 root root 214990793 Oct  9 21:52 ATLAS.root_0
2025-10-10 03:23:56 (26332): Guest Log: -rwxrwxrwx. 1 root root 182310614 Oct 10 01:23 HITS.pool.root.1
2025-10-10 03:23:56 (26332): Guest Log: -rwxrwxrwx. 1 root root      9697 Oct  9 21:52 init_data.xml
2025-10-10 03:23:56 (26332): Guest Log: -rwxrwxrwx. 1 root root    565604 Oct  3 15:33 input.tar.gz
2025-10-10 03:23:56 (26332): Guest Log: -rwxrwxrwx. 1 root root   2068480 Oct 10 01:23 result.tar.gz
2025-10-10 03:23:56 (26332): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  3 15:33 start_atlas.sh
2025-10-10 03:23:56 (26332): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-10 03:23:56 (26332): VM Completion File Detected.
2025-10-10 03:23:56 (26332): Powering off VM.
2025-10-10 03:23:57 (26332): Successfully stopped VM.
2025-10-10 03:23:57 (26332): Deregistering VM. (boinc_46094c2f31ce1158, slot#5)
2025-10-10 03:23:57 (26332): Removing network bandwidth throttle group from VM.
2025-10-10 03:23:58 (26332): Removing VM from VirtualBox.
2025-10-10 03:24:03 (26332): called boinc_finish(0)

</stderr_txt>
]]>

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