Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:20:59 (4118006): wrapper (7.7.26015): starting
07:20:59 (4118006): wrapper: running run_atlas (--nthreads 8)
[2025-10-03 07:20:59] Arguments: --nthreads 8
[2025-10-03 07:20:59] Threads: 8
[2025-10-03 07:20:59] Checking for CVMFS
[2025-10-03 07:21:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-03 07:21:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-03 07:21:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-03 07:21:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-03 07:21:00] 2.11.3.0 1855 17073 139768 151295 2 167 37637574 45568001 19785 130560 0 96834872 99.815 52982668 14591 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-03 07:21:00] CVMFS is ok
[2025-10-03 07:21:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-03 07:21:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-03 07:21:00] Further information can be found at the LHC@home message board.
[2025-10-03 07:21:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-03 07:21:00] Checking for apptainer binary...
[2025-10-03 07:21:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-03 07:21:00] Running /usr/bin/apptainer --version
[2025-10-03 07:21:00] apptainer version 1.4.1-1.el9
[2025-10-03 07:21:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-03 07:21:01] wns0009.triumf.lcg
[2025-10-03 07:21:01] apptainer works
[2025-10-03 07:21:01] Set ATHENA_PROC_NUMBER=8
[2025-10-03 07:21:01] Set ATHENA_CORE_NUMBER=8
[2025-10-03 07:21:01] Starting ATLAS job with PandaID=6828324042
[2025-10-03 07:21:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-03 07:28:32]  *** The last 200 lines of the pilot log: ***
[2025-10-03 07:28:32] 2025-10-03 14:27:30,631 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-03 07:28:32] 2025-10-03 14:27:30,632 | WARNING  | wrong length of table data, x=[1759501443.0, 1759501504.0], y=[1468.0, 0.0] (must be same and length>=4)
[2025-10-03 07:28:32] 2025-10-03 14:27:30,632 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-03 07:28:32] 2025-10-03 14:27:30,632 | INFO     | ..............................
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . Timing measurements:
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . get job = 0 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . initial setup = 7 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . payload setup = 19 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . stage-in = 0 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . payload execution = 88 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . stage-out = 2 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . log creation = 0 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | ..............................
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6828324042/pilotlog.txt
[2025-10-03 07:28:32] 2025-10-03 14:27:30,645 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-03 07:28:32] - Log from pilotlog.txt -
[2025-10-03 07:28:32] 2025-10-03 14:27:30,630 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6828324042/memory_monitor_summary.json (trf name=prmon)
[2025-10-03 07:28:32] 2025-10-03 14:27:30,631 | INFO     | extracted standard info from prmon json
[2025-10-03 07:28:32] 2025-10-03 14:27:30,631 | INFO     | extracted standard memory fields from prmon json
[2025-10-03 07:28:32] 2025-10-03 14:27:30,631 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-03 07:28:32] 2025-10-03 14:27:30,631 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-03 07:28:32] 2025-10-03 14:27:30,631 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-03 07:28:32] 2025-10-03 14:27:30,632 | WARNING  | wrong length of table data, x=[1759501443.0, 1759501504.0], y=[1468.0, 0.0] (must be same and length>=4)
[2025-10-03 07:28:32] 2025-10-03 14:27:30,632 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-03 07:28:32] 2025-10-03 14:27:30,632 | INFO     | ..............................
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . Timing measurements:
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . get job = 0 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . initial setup = 7 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . payload setup = 19 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . stage-in = 0 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . payload execution = 88 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . stage-out = 2 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . log creation = 0 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | ..............................
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6828324042/pilotlog.txt
[2025-10-03 07:28:32] 2025-10-03 14:27:30,646 | WARNING  | 
[2025-10-03 07:28:32] [begin log extracts]
[2025-10-03 07:28:32] - Log from pilotlog.txt -
[2025-10-03 07:28:32] 2025-10-03 14:27:30,630 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6828324042/memory_monitor_summary.json (trf name=prmon)
[2025-10-03 07:28:32] 2025-10-03 14:27:30,631 | INFO     | extracted standard info from prmon json
[2025-10-03 07:28:32] 2025-10-03 14:27:30,631 | INFO     | extracted standard memory fields from prmon json
[2025-10-03 07:28:32] 2025-10-03 14:27:30,631 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-03 07:28:32] 2025-10-03 14:27:30,631 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-03 07:28:32] 2025-10-03 14:27:30,631 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-03 07:28:32] 2025-10-03 14:27:30,632 | WARNING  | wrong length of table data, x=[1759501443.0, 1759501504.0], y=[1468.0, 0.0] (must be same and length>=4)
[2025-10-03 07:28:32] 2025-10-03 14:27:30,632 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-03 07:28:32] 2025-10-03 14:27:30,632 | INFO     | ..............................
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . Timing measurements:
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . get job = 0 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . initial setup = 7 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . payload setup = 19 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . stage-in = 0 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . payload execution = 88 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . stage-out = 2 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | . log creation = 0 s
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | ..............................
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-03 07:28:32] 2025-10-03 14:27:30,633 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6828324042/pilotlog.txt
[2025-10-03 07:28:32] [end log extracts]
[2025-10-03 07:28:32] 2025-10-03 14:27:30,646 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-03 07:28:32] 2025-10-03 14:27:30,647 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-03 07:28:32] 2025-10-03 14:27:30,690 | INFO     | PID=4121943 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-03 07:28:32] 2025-10-03 14:27:30,691 | INFO     | .. there are 33 such processes running
[2025-10-03 07:28:32] 2025-10-03 14:27:31,128 | INFO     | 
[2025-10-03 07:28:32] 2025-10-03 14:27:31,128 | INFO     | job summary report
[2025-10-03 07:28:32] 2025-10-03 14:27:31,128 | INFO     | --------------------------------------------------
[2025-10-03 07:28:32] 2025-10-03 14:27:31,129 | INFO     | PanDA job id: 6828324042
[2025-10-03 07:28:32] 2025-10-03 14:27:31,129 | INFO     | task id: 46376905
[2025-10-03 07:28:32] 2025-10-03 14:27:31,129 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-03 07:24:50,691 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-03 07:28:32] 2025-10-03 14:27:31,129 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-03 07:28:32] 2025-10-03 14:27:31,129 | INFO     | pilot state: failed 
[2025-10-03 07:28:32] 2025-10-03 14:27:31,129 | INFO     | transexitcode: 65
[2025-10-03 07:28:32] 2025-10-03 14:27:31,129 | INFO     | exeerrorcode: 65
[2025-10-03 07:28:32] 2025-10-03 14:27:31,129 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-03 07:28:32] 2025-10-03 14:27:31,129 | INFO     | exitcode: 65
[2025-10-03 07:28:32] 2025-10-03 14:27:31,129 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-03 07:28:32] 2025-10-03 14:27:31,129 | INFO     | cpuconsumptiontime: 19 s
[2025-10-03 07:28:32] 2025-10-03 14:27:31,129 | INFO     | nevents: 0
[2025-10-03 07:28:32] 2025-10-03 14:27:31,129 | INFO     | neventsw: 0
[2025-10-03 07:28:32] 2025-10-03 14:27:31,129 | INFO     | pid: 4128796
[2025-10-03 07:28:32] 2025-10-03 14:27:31,130 | INFO     | pgrp: 4128796
[2025-10-03 07:28:32] 2025-10-03 14:27:31,130 | INFO     | corecount: 8
[2025-10-03 07:28:32] 2025-10-03 14:27:31,130 | INFO     | event service: False
[2025-10-03 07:28:32] 2025-10-03 14:27:31,130 | INFO     | sizes: {0: 2347988, 1: 2348586, 2: 2348698, 3: 2348897, 14: 2348897, 25: 2348925, 32: 2349343, 36: 2349371, 113: 2372644, 114: 2372620, 118: 2377276, 255: 2377414}
[2025-10-03 07:28:32] 2025-10-03 14:27:31,130 | INFO     | --------------------------------------------------
[2025-10-03 07:28:32] 2025-10-03 14:27:31,130 | INFO     | 
[2025-10-03 07:28:32] 2025-10-03 14:27:31,130 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-03 07:28:32] 2025-10-03 14:27:31,218 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-03 07:28:32] 2025-10-03 14:27:31,218 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-03 07:28:32] 2025-10-03 14:27:31,218 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-03 07:28:32] 2025-10-03 14:27:31,218 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-03 07:28:32] 2025-10-03 14:27:31,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-03 07:28:32] 2025-10-03 14:27:31,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-03 07:28:32] 2025-10-03 14:27:31,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-03 07:28:32] 2025-10-03 14:27:31,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-03 07:28:32] 2025-10-03 14:27:31,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-03 07:28:32] 2025-10-03 14:27:31,219 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-03 07:28:32] 2025-10-03 14:27:31,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-03 07:28:32] 2025-10-03 14:27:31,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-03 07:28:32] 2025-10-03 14:27:31,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-03 07:28:32] 2025-10-03 14:27:31,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-03 07:28:32] 2025-10-03 14:27:31,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-03 07:28:32] 2025-10-03 14:27:31,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-03 07:28:32] 2025-10-03 14:27:31,219 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-03 07:28:32] 2025-10-03 14:27:31,219 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-03 07:28:32] 2025-10-03 14:27:31,219 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-03 07:28:32] 2025-10-03 14:27:31,219 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-03 07:28:32] 2025-10-03 14:27:31,219 | INFO     | job 6828324042 has completed (purged errors)
[2025-10-03 07:28:32] 2025-10-03 14:27:31,220 | INFO     | overall cleanup function is called
[2025-10-03 07:28:32] 2025-10-03 14:27:32,226 | INFO     | --- collectZombieJob: --- 10, [4128796]
[2025-10-03 07:28:32] 2025-10-03 14:27:32,226 | INFO     | zombie collector waiting for pid 4128796
[2025-10-03 07:28:32] 2025-10-03 14:27:32,226 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-03 07:28:32] 2025-10-03 14:27:32,227 | INFO     | collected zombie processes
[2025-10-03 07:28:32] 2025-10-03 14:27:32,227 | INFO     | will attempt to kill all subprocesses of pid=4128796
[2025-10-03 07:28:32] 2025-10-03 14:27:32,918 | INFO     | process IDs to be killed: [4128796] (in reverse order)
[2025-10-03 07:28:32] 2025-10-03 14:27:33,620 | WARNING  | found no corresponding commands to process id(s)
[2025-10-03 07:28:32] 2025-10-03 14:27:33,621 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-03 07:28:32] 2025-10-03 14:27:33,686 | INFO     | did not find any defunct processes belonging to 4128796
[2025-10-03 07:28:32] 2025-10-03 14:27:33,700 | INFO     | did not find any defunct processes belonging to 4128796
[2025-10-03 07:28:32] 2025-10-03 14:27:33,700 | INFO     | ready for new job
[2025-10-03 07:28:32] 2025-10-03 14:27:33,700 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-03 07:28:32] 2025-10-03 14:27:33,701 | INFO     | ***************************************
[2025-10-03 07:28:32] 2025-10-03 14:27:33,702 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-03 07:28:32] 2025-10-03 14:27:33,702 | INFO     | ***************************************
[2025-10-03 07:28:32] 2025-10-03 14:27:33,702 | INFO     | 
[2025-10-03 07:28:32] 2025-10-03 14:27:33,709 | INFO     | architecture information:
[2025-10-03 07:28:32] 2025-10-03 14:27:33,713 | INFO     | executing command: cat /etc/os-release
[2025-10-03 07:28:32] 2025-10-03 14:27:33,791 | INFO     | cat /etc/os-release:
[2025-10-03 07:28:32] NAME="CentOS Linux"
[2025-10-03 07:28:32] VERSION="7 (Core)"
[2025-10-03 07:28:32] ID="centos"
[2025-10-03 07:28:32] ID_LIKE="rhel fedora"
[2025-10-03 07:28:32] VERSION_ID="7"
[2025-10-03 07:28:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-03 07:28:32] ANSI_COLOR="0;31"
[2025-10-03 07:28:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-03 07:28:32] HOME_URL="https://www.centos.org/"
[2025-10-03 07:28:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-03 07:28:32] 
[2025-10-03 07:28:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-03 07:28:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-03 07:28:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-03 07:28:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-03 07:28:32] 
[2025-10-03 07:28:32] 2025-10-03 14:27:33,791 | INFO     | ***************************************
[2025-10-03 07:28:32] 2025-10-03 14:27:34,295 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-03 07:28:32] 2025-10-03 14:27:34,348 | INFO     | sufficient remaining disk space (1303959830528 B)
[2025-10-03 07:28:32] 2025-10-03 14:27:34,349 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-03 07:28:32] 2025-10-03 14:27:34,349 | INFO     | current server update state: UPDATING_FINAL
[2025-10-03 07:28:32] 2025-10-03 14:27:34,349 | INFO     | update_server=False
[2025-10-03 07:28:32] 2025-10-03 14:27:34,349 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-03 07:28:32] 2025-10-03 14:27:34,350 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-03 07:28:32] 2025-10-03 14:27:34,350 | INFO     | aborting loop
[2025-10-03 07:28:32] 2025-10-03 14:27:34,711 | INFO     | all job control threads have been joined
[2025-10-03 07:28:32] 2025-10-03 14:27:35,318 | INFO     | all data control threads have been joined
[2025-10-03 07:28:32] 2025-10-03 14:27:35,355 | INFO     | [job] retrieve thread has finished
[2025-10-03 07:28:32] 2025-10-03 14:27:35,356 | INFO     | [job] job monitor thread has finished
[2025-10-03 07:28:32] 2025-10-03 14:27:35,571 | INFO     | all payload control threads have been joined
[2025-10-03 07:28:32] 2025-10-03 14:27:35,611 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-03 07:28:32] 2025-10-03 14:27:35,717 | INFO     | [job] control thread has finished
[2025-10-03 07:28:32] 2025-10-03 14:27:35,833 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-03 07:28:32] 2025-10-03 14:27:35,898 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-03 07:28:32] 2025-10-03 14:27:35,904 | INFO     | [data] copytool_in thread has finished
[2025-10-03 07:28:32] 2025-10-03 14:27:35,914 | INFO     | [job] validate thread has finished
[2025-10-03 07:28:32] 2025-10-03 14:27:35,995 | INFO     | [payload] execute_payloads thread has finished
[2025-10-03 07:28:32] 2025-10-03 14:27:36,070 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-03 07:28:32] 2025-10-03 14:27:36,173 | INFO     | [payload] failed_post thread has finished
[2025-10-03 07:28:32] 2025-10-03 14:27:36,306 | INFO     | [payload] validate_post thread has finished
[2025-10-03 07:28:32] 2025-10-03 14:27:36,325 | INFO     | [data] control thread has finished
[2025-10-03 07:28:32] 2025-10-03 14:27:36,460 | INFO     | [payload] validate_pre thread has finished
[2025-10-03 07:28:32] 2025-10-03 14:27:36,572 | INFO     | [job] create_data_payload thread has finished
[2025-10-03 07:28:32] 2025-10-03 14:27:36,577 | INFO     | [payload] control thread has finished
[2025-10-03 07:28:32] 2025-10-03 14:27:36,839 | INFO     | [job] queue monitor thread has finished
[2025-10-03 07:28:32] 2025-10-03 14:27:37,618 | INFO     | [data] copytool_out thread has finished
[2025-10-03 07:28:32] 2025-10-03 14:27:40,084 | INFO     | [data] queue_monitor thread has finished
[2025-10-03 07:28:32] 2025-10-03 14:28:04,337 | INFO     | PID=4121943 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-03 07:28:32] 2025-10-03 14:28:04,337 | INFO     | .. there are 33 such processes running
[2025-10-03 07:28:32] 2025-10-03 14:28:04,337 | INFO     | found 0 job(s) in 20 queues
[2025-10-03 07:28:32] 2025-10-03 14:28:04,337 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-03 07:28:32] 2025-10-03 14:28:04,337 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-03 07:28:32] 2025-10-03 14:28:23,937 | INFO     | [monitor] cgroup control has ended
[2025-10-03 07:28:32] 2025-10-03 14:28:25,948 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139986525701952)>', '<ExcThread(monitor, started 139985843898112)>']
[2025-10-03 07:28:32] 2025-10-03 14:28:26,469 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-03 07:28:32] 2025-10-03 14:28:26,469 | INFO     | [monitor] control thread has ended
[2025-10-03 07:28:32] 2025-10-03 14:28:30,974 | INFO     | all workflow threads have been joined
[2025-10-03 07:28:32] 2025-10-03 14:28:30,974 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-03 07:28:32] 2025-10-03 14:28:30,975 | INFO     | traces error code: 0
[2025-10-03 07:28:32] 2025-10-03 14:28:30,975 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-03 07:28:32] 2025-10-03 14:28:31,776 [wrapper] ==== pilot stdout END ====
[2025-10-03 07:28:32] 2025-10-03 14:28:31,816 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-03 07:28:32] 2025-10-03 14:28:31,860 [wrapper] pilotpid: 4121943
[2025-10-03 07:28:32] 2025-10-03 14:28:31,883 [wrapper] Pilot exit status: 0
[2025-10-03 07:28:32] 2025-10-03 14:28:32,041 [wrapper] pandaids: 6828324042
[2025-10-03 07:28:32] 2025-10-03 14:28:32,279 [wrapper] cleanup supervisor_pilot 4121949 4121944
[2025-10-03 07:28:32] 2025-10-03 14:28:32,303 [wrapper] Test setup, not cleaning
[2025-10-03 07:28:32] 2025-10-03 14:28:32,336 [wrapper] apfmon messages muted
[2025-10-03 07:28:32] 2025-10-03 14:28:32,379 [wrapper] ==== wrapper stdout END ====
[2025-10-03 07:28:32] 2025-10-03 14:28:32,410 [wrapper] ==== wrapper stderr END ====
[2025-10-03 07:28:32]  *** Error codes and diagnostics ***
[2025-10-03 07:28:32]     "exeErrorCode": 65,
[2025-10-03 07:28:32]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-03 07:28:32]     "pilotErrorCode": 1305,
[2025-10-03 07:28:32]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-03 07:28:32]  *** Listing of results directory ***
[2025-10-03 07:28:32] total 215556
[2025-10-03 07:28:32] -rw-r--r--. 1 boinc boinc    552446 Oct  3 04:28 pilot3.tar.gz
[2025-10-03 07:28:32] -rwx------. 1 boinc boinc     36292 Oct  3 04:52 runpilot2-wrapper.sh
[2025-10-03 07:28:32] -rw-r--r--. 1 boinc boinc      5112 Oct  3 04:52 queuedata.json
[2025-10-03 07:28:32] -rw-r--r--. 1 boinc boinc       100 Oct  3 07:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-03 07:28:32] -rwxr-xr-x. 1 boinc boinc      7986 Oct  3 07:20 run_atlas
[2025-10-03 07:28:32] -rw-r--r--. 1 boinc boinc       105 Oct  3 07:20 job.xml
[2025-10-03 07:28:32] -rw-r--r--. 1 boinc boinc      6443 Oct  3 07:20 init_data.xml
[2025-10-03 07:28:32] -rw-r--r--. 2 boinc boinc 216598959 Oct  3 07:20 EVNT.46376901._001393.pool.root.1
[2025-10-03 07:28:32] -rw-r--r--. 2 boinc boinc     15120 Oct  3 07:20 start_atlas.sh
[2025-10-03 07:28:32] drwxrwx--x. 2 boinc boinc      4096 Oct  3 07:20 shared
[2025-10-03 07:28:32] -rw-r--r--. 2 boinc boinc    565597 Oct  3 07:20 input.tar.gz
[2025-10-03 07:28:32] -rw-r--r--. 1 boinc boinc         0 Oct  3 07:20 boinc_lockfile
[2025-10-03 07:28:32] -rw-r--r--. 1 boinc boinc      2519 Oct  3 07:21 pandaJob.out
[2025-10-03 07:28:32] -rw-------. 1 boinc boinc    976010 Oct  3 07:22 agis_schedconf.cvmfs.json
[2025-10-03 07:28:32] -rw-------. 1 boinc boinc   1560401 Oct  3 07:22 agis_ddmendpoints.agis.ALL.json
[2025-10-03 07:28:32] drwx------. 4 boinc boinc      4096 Oct  3 07:22 pilot3
[2025-10-03 07:28:32] -rw-r--r--. 1 boinc boinc       524 Oct  3 07:24 boinc_task_state.xml
[2025-10-03 07:28:32] -rw-------. 1 boinc boinc       966 Oct  3 07:25 memory_monitor_summary.json
[2025-10-03 07:28:32] -rw-------. 1 boinc boinc     22434 Oct  3 07:25 log.46376905._040671.job.log.tgz.1
[2025-10-03 07:28:32] -rw-------. 1 boinc boinc        95 Oct  3 07:27 pilot_heartbeat.json
[2025-10-03 07:28:32] -rw-------. 1 boinc boinc      8387 Oct  3 07:27 heartbeat.json
[2025-10-03 07:28:32] -rw-------. 1 boinc boinc      4823 Oct  3 07:28 pilotlog.txt
[2025-10-03 07:28:32] -rw-r--r--. 1 boinc boinc      8192 Oct  3 07:28 boinc_mmap_file
[2025-10-03 07:28:32] -rw-r--r--. 1 boinc boinc        23 Oct  3 07:28 wrapper_checkpoint.txt
[2025-10-03 07:28:32] -rw-------. 1 boinc boinc     96369 Oct  3 07:28 log.46376905._040671.job.log.1
[2025-10-03 07:28:32] -rw-------. 1 boinc boinc       188 Oct  3 07:28 output.list
[2025-10-03 07:28:32] -rw-r--r--. 1 boinc boinc       620 Oct  3 07:28 runtime_log
[2025-10-03 07:28:32] -rw-------. 1 boinc boinc    143360 Oct  3 07:28 result.tar.gz
[2025-10-03 07:28:32] -rw-r--r--. 1 boinc boinc      8526 Oct  3 07:28 runtime_log.err
[2025-10-03 07:28:32] -rw-------. 1 boinc boinc       647 Oct  3 07:28 42VMDmaVtO8n9Rq4apOajLDm4fhM0noT9bVof3QYDmGRBMDm1rzLhn.diag
[2025-10-03 07:28:32] -rw-r--r--. 1 boinc boinc     22013 Oct  3 07:28 stderr.txt
[2025-10-03 07:28:33] No HITS result produced
[2025-10-03 07:28:33]  *** Contents of shared directory: ***
[2025-10-03 07:28:33] total 212240
[2025-10-03 07:28:33] -rw-r--r--. 2 boinc boinc 216598959 Oct  3 07:20 ATLAS.root_0
[2025-10-03 07:28:33] -rw-r--r--. 2 boinc boinc     15120 Oct  3 07:20 start_atlas.sh
[2025-10-03 07:28:33] -rw-r--r--. 2 boinc boinc    565597 Oct  3 07:20 input.tar.gz
[2025-10-03 07:28:33] -rw-------. 1 boinc boinc    143360 Oct  3 07:28 result.tar.gz
07:28:34 (4118006): run_atlas exited; CPU time 33.938251
07:28:34 (4118006): called boinc_finish(0)

</stderr_txt>
]]>

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