Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:10:19 (36053): wrapper (7.7.26015): starting
05:10:19 (36053): wrapper: running run_atlas (--nthreads 12)
[2025-10-03 05:10:19] Arguments: --nthreads 12
[2025-10-03 05:10:19] Threads: 12
[2025-10-03 05:10:19] Checking for CVMFS
[2025-10-03 05:10:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-03 05:10:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-03 05:10:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-03 05:10:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-03 05:10:20] 2.11.5.0 3039 18477 241864 151291 3 439 36312663 45568001 12341 130560 0 159200847 99.843 75252099 25645 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-03 05:10:20] CVMFS is ok
[2025-10-03 05:10:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-03 05:10:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-03 05:10:20] Further information can be found at the LHC@home message board.
[2025-10-03 05:10:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-03 05:10:20] Checking for apptainer binary...
[2025-10-03 05:10:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-03 05:10:20] Running /usr/bin/apptainer --version
[2025-10-03 05:10:20] apptainer version 1.4.1-1.el9
[2025-10-03 05:10:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-03 05:10:20] wns0064.triumf.lcg
[2025-10-03 05:10:20] apptainer works
[2025-10-03 05:10:20] Set ATHENA_PROC_NUMBER=12
[2025-10-03 05:10:20] Set ATHENA_CORE_NUMBER=12
[2025-10-03 05:10:20] Starting ATLAS job with PandaID=6828227031
[2025-10-03 05:10:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-03 05:13:38]  *** The last 200 lines of the pilot log: ***
[2025-10-03 05:13:38] 2025-10-03 12:13:05,805 | WARNING  | found no stored workdir sizes
[2025-10-03 05:13:38] 2025-10-03 12:13:05,805 | INFO     | will not add max space = 0 B to job metrics
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | WARNING  | wrong length of table data, x=[1759493450.0], y=[788.0] (must be same and length>=4)
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | could have reported an average CPU frequency of 2829 MHz (4 samples)
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | ..............................
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . Timing measurements:
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . get job = 0 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . initial setup = 2 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . payload setup = 4 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . stage-in = 0 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . payload execution = 13 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . stage-out = 0 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . log creation = 0 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | ..............................
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-03 05:13:38] 2025-10-03 12:13:05,807 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6828227031/pilotlog.txt
[2025-10-03 05:13:38] 2025-10-03 12:13:05,815 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-03 05:13:38] - Log from pilotlog.txt -
[2025-10-03 05:13:38] 2025-10-03 12:13:05,804 | INFO     | extracted standard memory fields from prmon json
[2025-10-03 05:13:38] 2025-10-03 12:13:05,804 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-03 05:13:38] 2025-10-03 12:13:05,805 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-03 05:13:38] 2025-10-03 12:13:05,805 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-03 05:13:38] 2025-10-03 12:13:05,805 | WARNING  | found no stored workdir sizes
[2025-10-03 05:13:38] 2025-10-03 12:13:05,805 | INFO     | will not add max space = 0 B to job metrics
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | WARNING  | wrong length of table data, x=[1759493450.0], y=[788.0] (must be same and length>=4)
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | could have reported an average CPU frequency of 2829 MHz (4 samples)
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | ..............................
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . Timing measurements:
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . get job = 0 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . initial setup = 2 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . payload setup = 4 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . stage-in = 0 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . payload execution = 13 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . stage-out = 0 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . log creation = 0 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | ..............................
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-03 05:13:38] 2025-10-03 12:13:05,807 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6828227031/pilotlog.txt
[2025-10-03 05:13:38] 2025-10-03 12:13:05,816 | WARNING  | 
[2025-10-03 05:13:38] [begin log extracts]
[2025-10-03 05:13:38] - Log from pilotlog.txt -
[2025-10-03 05:13:38] 2025-10-03 12:13:05,804 | INFO     | extracted standard memory fields from prmon json
[2025-10-03 05:13:38] 2025-10-03 12:13:05,804 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-03 05:13:38] 2025-10-03 12:13:05,805 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-03 05:13:38] 2025-10-03 12:13:05,805 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-03 05:13:38] 2025-10-03 12:13:05,805 | WARNING  | found no stored workdir sizes
[2025-10-03 05:13:38] 2025-10-03 12:13:05,805 | INFO     | will not add max space = 0 B to job metrics
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | WARNING  | wrong length of table data, x=[1759493450.0], y=[788.0] (must be same and length>=4)
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | could have reported an average CPU frequency of 2829 MHz (4 samples)
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | ..............................
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . Timing measurements:
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . get job = 0 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . initial setup = 2 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . payload setup = 4 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . stage-in = 0 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . payload execution = 13 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . stage-out = 0 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | . log creation = 0 s
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | ..............................
[2025-10-03 05:13:38] 2025-10-03 12:13:05,806 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-03 05:13:38] 2025-10-03 12:13:05,807 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6828227031/pilotlog.txt
[2025-10-03 05:13:38] [end log extracts]
[2025-10-03 05:13:38] 2025-10-03 12:13:05,816 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-03 05:13:38] 2025-10-03 12:13:05,816 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-03 05:13:38] 2025-10-03 12:13:06,142 | INFO     | 
[2025-10-03 05:13:38] 2025-10-03 12:13:06,142 | INFO     | job summary report
[2025-10-03 05:13:38] 2025-10-03 12:13:06,142 | INFO     | --------------------------------------------------
[2025-10-03 05:13:38] 2025-10-03 12:13:06,142 | INFO     | PanDA job id: 6828227031
[2025-10-03 05:13:38] 2025-10-03 12:13:06,142 | INFO     | task id: 46376994
[2025-10-03 05:13:38] 2025-10-03 12:13:06,142 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-03 05:10:56,224 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-03 05:13:38] 2025-10-03 12:13:06,142 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-03 05:13:38] 2025-10-03 12:13:06,142 | INFO     | pilot state: failed 
[2025-10-03 05:13:38] 2025-10-03 12:13:06,142 | INFO     | transexitcode: 65
[2025-10-03 05:13:38] 2025-10-03 12:13:06,142 | INFO     | exeerrorcode: 65
[2025-10-03 05:13:38] 2025-10-03 12:13:06,142 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-03 05:13:38] 2025-10-03 12:13:06,142 | INFO     | exitcode: 65
[2025-10-03 05:13:38] 2025-10-03 12:13:06,142 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-03 05:13:38] 2025-10-03 12:13:06,143 | INFO     | cpuconsumptiontime: 18 s
[2025-10-03 05:13:38] 2025-10-03 12:13:06,143 | INFO     | nevents: 0
[2025-10-03 05:13:38] 2025-10-03 12:13:06,143 | INFO     | neventsw: 0
[2025-10-03 05:13:38] 2025-10-03 12:13:06,143 | INFO     | pid: 46423
[2025-10-03 05:13:38] 2025-10-03 12:13:06,143 | INFO     | pgrp: 46423
[2025-10-03 05:13:38] 2025-10-03 12:13:06,143 | INFO     | corecount: 12
[2025-10-03 05:13:38] 2025-10-03 12:13:06,143 | INFO     | event service: False
[2025-10-03 05:13:38] 2025-10-03 12:13:06,143 | INFO     | sizes: {0: 2348645, 1: 2348844, 4: 2349106, 11: 2349134, 21: 2372363, 22: 2376655, 24: 2376811, 144: 2376977}
[2025-10-03 05:13:38] 2025-10-03 12:13:06,143 | INFO     | --------------------------------------------------
[2025-10-03 05:13:38] 2025-10-03 12:13:06,143 | INFO     | 
[2025-10-03 05:13:38] 2025-10-03 12:13:06,143 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-03 05:13:38] 2025-10-03 12:13:06,156 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-03 05:13:38] 2025-10-03 12:13:06,157 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-03 05:13:38] 2025-10-03 12:13:06,157 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-03 05:13:38] 2025-10-03 12:13:06,157 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-03 05:13:38] 2025-10-03 12:13:06,157 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-03 05:13:38] 2025-10-03 12:13:06,157 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-03 05:13:38] 2025-10-03 12:13:06,157 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-03 05:13:38] 2025-10-03 12:13:06,157 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-03 05:13:38] 2025-10-03 12:13:06,157 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-03 05:13:38] 2025-10-03 12:13:06,157 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-03 05:13:38] 2025-10-03 12:13:06,157 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-03 05:13:38] 2025-10-03 12:13:06,157 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-03 05:13:38] 2025-10-03 12:13:06,157 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-03 05:13:38] 2025-10-03 12:13:06,157 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-03 05:13:38] 2025-10-03 12:13:06,157 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-03 05:13:38] 2025-10-03 12:13:06,157 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-03 05:13:38] 2025-10-03 12:13:06,157 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-03 05:13:38] 2025-10-03 12:13:06,157 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-03 05:13:38] 2025-10-03 12:13:06,158 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-03 05:13:38] 2025-10-03 12:13:06,158 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-03 05:13:38] 2025-10-03 12:13:06,158 | INFO     | job 6828227031 has completed (purged errors)
[2025-10-03 05:13:38] 2025-10-03 12:13:06,158 | INFO     | overall cleanup function is called
[2025-10-03 05:13:38] 2025-10-03 12:13:07,164 | INFO     | --- collectZombieJob: --- 10, [46423]
[2025-10-03 05:13:38] 2025-10-03 12:13:07,164 | INFO     | zombie collector waiting for pid 46423
[2025-10-03 05:13:38] 2025-10-03 12:13:07,164 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-03 05:13:38] 2025-10-03 12:13:07,164 | INFO     | collected zombie processes
[2025-10-03 05:13:38] 2025-10-03 12:13:07,164 | INFO     | will attempt to kill all subprocesses of pid=46423
[2025-10-03 05:13:38] 2025-10-03 12:13:07,311 | INFO     | process IDs to be killed: [46423] (in reverse order)
[2025-10-03 05:13:38] 2025-10-03 12:13:07,367 | WARNING  | found no corresponding commands to process id(s)
[2025-10-03 05:13:38] 2025-10-03 12:13:07,368 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-03 05:13:38] 2025-10-03 12:13:07,374 | INFO     | did not find any defunct processes belonging to 46423
[2025-10-03 05:13:38] 2025-10-03 12:13:07,379 | INFO     | did not find any defunct processes belonging to 46423
[2025-10-03 05:13:38] 2025-10-03 12:13:07,379 | INFO     | ready for new job
[2025-10-03 05:13:38] 2025-10-03 12:13:07,379 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-03 05:13:38] 2025-10-03 12:13:07,381 | INFO     | ***************************************
[2025-10-03 05:13:38] 2025-10-03 12:13:07,381 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-03 05:13:38] 2025-10-03 12:13:07,381 | INFO     | ***************************************
[2025-10-03 05:13:38] 2025-10-03 12:13:07,381 | INFO     | 
[2025-10-03 05:13:38] 2025-10-03 12:13:07,382 | INFO     | architecture information:
[2025-10-03 05:13:38] 2025-10-03 12:13:07,383 | INFO     | executing command: cat /etc/os-release
[2025-10-03 05:13:38] 2025-10-03 12:13:07,393 | INFO     | cat /etc/os-release:
[2025-10-03 05:13:38] NAME="CentOS Linux"
[2025-10-03 05:13:38] VERSION="7 (Core)"
[2025-10-03 05:13:38] ID="centos"
[2025-10-03 05:13:38] ID_LIKE="rhel fedora"
[2025-10-03 05:13:38] VERSION_ID="7"
[2025-10-03 05:13:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-03 05:13:38] ANSI_COLOR="0;31"
[2025-10-03 05:13:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-03 05:13:38] HOME_URL="https://www.centos.org/"
[2025-10-03 05:13:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-03 05:13:38] 
[2025-10-03 05:13:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-03 05:13:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-03 05:13:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-03 05:13:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-03 05:13:38] 
[2025-10-03 05:13:38] 2025-10-03 12:13:07,393 | INFO     | ***************************************
[2025-10-03 05:13:38] 2025-10-03 12:13:07,894 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-03 05:13:38] 2025-10-03 12:13:07,905 | INFO     | sufficient remaining disk space (2064780361728 B)
[2025-10-03 05:13:38] 2025-10-03 12:13:07,906 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-03 05:13:38] 2025-10-03 12:13:07,906 | INFO     | current server update state: UPDATING_FINAL
[2025-10-03 05:13:38] 2025-10-03 12:13:07,906 | INFO     | update_server=False
[2025-10-03 05:13:38] 2025-10-03 12:13:07,906 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-03 05:13:38] 2025-10-03 12:13:07,906 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-03 05:13:38] 2025-10-03 12:13:07,940 | INFO     | all data control threads have been joined
[2025-10-03 05:13:38] 2025-10-03 12:13:08,241 | INFO     | all job control threads have been joined
[2025-10-03 05:13:38] 2025-10-03 12:13:08,628 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-03 05:13:38] 2025-10-03 12:13:08,629 | INFO     | aborting loop
[2025-10-03 05:13:38] 2025-10-03 12:13:08,907 | INFO     | [job] retrieve thread has finished
[2025-10-03 05:13:38] 2025-10-03 12:13:08,921 | INFO     | all payload control threads have been joined
[2025-10-03 05:13:38] 2025-10-03 12:13:08,926 | INFO     | [payload] validate_pre thread has finished
[2025-10-03 05:13:38] 2025-10-03 12:13:08,945 | INFO     | [data] control thread has finished
[2025-10-03 05:13:38] 2025-10-03 12:13:08,980 | INFO     | [payload] failed_post thread has finished
[2025-10-03 05:13:38] 2025-10-03 12:13:09,011 | INFO     | [data] copytool_in thread has finished
[2025-10-03 05:13:38] 2025-10-03 12:13:09,048 | INFO     | [payload] validate_post thread has finished
[2025-10-03 05:13:38] 2025-10-03 12:13:09,245 | INFO     | [job] control thread has finished
[2025-10-03 05:13:38] 2025-10-03 12:13:09,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-03 05:13:38] 2025-10-03 12:13:09,482 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-03 05:13:38] 2025-10-03 12:13:09,634 | INFO     | [job] job monitor thread has finished
[2025-10-03 05:13:38] 2025-10-03 12:13:09,909 | INFO     | [data] copytool_out thread has finished
[2025-10-03 05:13:38] 2025-10-03 12:13:09,926 | INFO     | [payload] control thread has finished
[2025-10-03 05:13:38] 2025-10-03 12:13:10,114 | INFO     | [payload] execute_payloads thread has finished
[2025-10-03 05:13:38] 2025-10-03 12:13:10,200 | INFO     | [job] validate thread has finished
[2025-10-03 05:13:38] 2025-10-03 12:13:10,339 | INFO     | [job] create_data_payload thread has finished
[2025-10-03 05:13:38] 2025-10-03 12:13:10,902 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-03 05:13:38] 2025-10-03 12:13:11,907 | INFO     | [job] queue monitor thread has finished
[2025-10-03 05:13:38] 2025-10-03 12:13:13,418 | INFO     | [data] queue_monitor thread has finished
[2025-10-03 05:13:38] 2025-10-03 12:13:28,021 | INFO     | [monitor] cgroup control has ended
[2025-10-03 05:13:38] 2025-10-03 12:13:29,686 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140691033925440)>', '<ExcThread(monitor, started 140690352752384)>']
[2025-10-03 05:13:38] 2025-10-03 12:13:34,710 | INFO     | all workflow threads have been joined
[2025-10-03 05:13:38] 2025-10-03 12:13:34,710 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-03 05:13:38] 2025-10-03 12:13:34,710 | INFO     | traces error code: 0
[2025-10-03 05:13:38] 2025-10-03 12:13:34,711 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-03 05:13:38] 2025-10-03 12:13:37,782 | INFO     | PID=39796 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-03 05:13:38] 2025-10-03 12:13:37,782 | INFO     | .. there are 21 such processes running
[2025-10-03 05:13:38] 2025-10-03 12:13:37,783 | INFO     | found 0 job(s) in 20 queues
[2025-10-03 05:13:38] 2025-10-03 12:13:37,783 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-03 05:13:38] 2025-10-03 12:13:37,783 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-03 05:13:38] 2025-10-03 12:13:37,783 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-03 05:13:38] 2025-10-03 12:13:37,783 | CRITICAL | thread 'MainThread' is not alive
[2025-10-03 05:13:38] 2025-10-03 12:13:37,783 | INFO     | [monitor] control thread has ended
[2025-10-03 05:13:38] 2025-10-03 12:13:37,919 [wrapper] ==== pilot stdout END ====
[2025-10-03 05:13:38] 2025-10-03 12:13:37,920 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-03 05:13:38] 2025-10-03 12:13:37,922 [wrapper] pilotpid: 39796
[2025-10-03 05:13:38] 2025-10-03 12:13:37,924 [wrapper] Pilot exit status: 0
[2025-10-03 05:13:38] 2025-10-03 12:13:37,930 [wrapper] pandaids: 6828227031
[2025-10-03 05:13:38] 2025-10-03 12:13:37,968 [wrapper] cleanup supervisor_pilot   39802 39797
[2025-10-03 05:13:38] 2025-10-03 12:13:37,970 [wrapper] Test setup, not cleaning
[2025-10-03 05:13:38] 2025-10-03 12:13:37,972 [wrapper] apfmon messages muted
[2025-10-03 05:13:38] 2025-10-03 12:13:37,973 [wrapper] ==== wrapper stdout END ====
[2025-10-03 05:13:38] 2025-10-03 12:13:37,975 [wrapper] ==== wrapper stderr END ====
[2025-10-03 05:13:38]  *** Error codes and diagnostics ***
[2025-10-03 05:13:38]     "exeErrorCode": 65,
[2025-10-03 05:13:38]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-03 05:13:38]     "pilotErrorCode": 1305,
[2025-10-03 05:13:38]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-03 05:13:38]  *** Listing of results directory ***
[2025-10-03 05:13:38] total 222752
[2025-10-03 05:13:38] -rw-r--r--. 1 boinc boinc    552446 Oct  3 02:22 pilot3.tar.gz
[2025-10-03 05:13:38] -rw-r--r--. 1 boinc boinc      5112 Oct  3 02:38 queuedata.json
[2025-10-03 05:13:38] -rwx------. 1 boinc boinc     36292 Oct  3 02:39 runpilot2-wrapper.sh
[2025-10-03 05:13:38] -rw-r--r--. 1 boinc boinc       100 Oct  3 05:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-03 05:13:38] -rwxr-xr-x. 1 boinc boinc      7986 Oct  3 05:10 run_atlas
[2025-10-03 05:13:38] -rw-r--r--. 1 boinc boinc       105 Oct  3 05:10 job.xml
[2025-10-03 05:13:38] -rw-r--r--. 1 boinc boinc      6594 Oct  3 05:10 init_data.xml
[2025-10-03 05:13:38] -rw-r--r--. 2 boinc boinc 224007067 Oct  3 05:10 EVNT.46376992._000582.pool.root.1
[2025-10-03 05:13:38] -rw-r--r--. 2 boinc boinc     15120 Oct  3 05:10 start_atlas.sh
[2025-10-03 05:13:38] drwxrwx--x. 2 boinc boinc      4096 Oct  3 05:10 shared
[2025-10-03 05:13:38] -rw-r--r--. 2 boinc boinc    565609 Oct  3 05:10 input.tar.gz
[2025-10-03 05:13:38] -rw-r--r--. 1 boinc boinc         0 Oct  3 05:10 boinc_lockfile
[2025-10-03 05:13:38] -rw-r--r--. 1 boinc boinc      2559 Oct  3 05:10 pandaJob.out
[2025-10-03 05:13:38] -rw-------. 1 boinc boinc    975963 Oct  3 05:10 agis_schedconf.cvmfs.json
[2025-10-03 05:13:38] -rw-------. 1 boinc boinc   1560401 Oct  3 05:10 agis_ddmendpoints.agis.ALL.json
[2025-10-03 05:13:38] drwx------. 4 boinc boinc      4096 Oct  3 05:10 pilot3
[2025-10-03 05:13:38] -rw-------. 1 boinc boinc       968 Oct  3 05:10 memory_monitor_summary.json
[2025-10-03 05:13:38] -rw-r--r--. 1 boinc boinc       522 Oct  3 05:11 boinc_task_state.xml
[2025-10-03 05:13:38] -rw-------. 1 boinc boinc     21260 Oct  3 05:11 log.46376994._016209.job.log.tgz.1
[2025-10-03 05:13:38] -rw-------. 1 boinc boinc      8405 Oct  3 05:13 heartbeat.json
[2025-10-03 05:13:38] -rw-r--r--. 1 boinc boinc      8192 Oct  3 05:13 boinc_mmap_file
[2025-10-03 05:13:38] -rw-------. 1 boinc boinc       891 Oct  3 05:13 pilotlog.txt
[2025-10-03 05:13:38] -rw-------. 1 boinc boinc        95 Oct  3 05:13 pilot_heartbeat.json
[2025-10-03 05:13:38] -rw-r--r--. 1 boinc boinc        22 Oct  3 05:13 wrapper_checkpoint.txt
[2025-10-03 05:13:38] -rw-------. 1 boinc boinc     82736 Oct  3 05:13 log.46376994._016209.job.log.1
[2025-10-03 05:13:38] -rw-------. 1 boinc boinc       188 Oct  3 05:13 output.list
[2025-10-03 05:13:38] -rw-r--r--. 1 boinc boinc       620 Oct  3 05:13 runtime_log
[2025-10-03 05:13:38] -rw-------. 1 boinc boinc    122880 Oct  3 05:13 result.tar.gz
[2025-10-03 05:13:38] -rw-r--r--. 1 boinc boinc      8528 Oct  3 05:13 runtime_log.err
[2025-10-03 05:13:38] -rw-------. 1 boinc boinc       645 Oct  3 05:13 OPRMDmURrO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpWHNDmMWUzWo.diag
[2025-10-03 05:13:38] -rw-r--r--. 1 boinc boinc     21609 Oct  3 05:13 stderr.txt
[2025-10-03 05:13:38] No HITS result produced
[2025-10-03 05:13:38]  *** Contents of shared directory: ***
[2025-10-03 05:13:38] total 219452
[2025-10-03 05:13:38] -rw-r--r--. 2 boinc boinc 224007067 Oct  3 05:10 ATLAS.root_0
[2025-10-03 05:13:38] -rw-r--r--. 2 boinc boinc     15120 Oct  3 05:10 start_atlas.sh
[2025-10-03 05:13:38] -rw-r--r--. 2 boinc boinc    565609 Oct  3 05:10 input.tar.gz
[2025-10-03 05:13:38] -rw-------. 1 boinc boinc    122880 Oct  3 05:13 result.tar.gz
05:13:39 (36053): run_atlas exited; CPU time 19.538750
05:13:39 (36053): called boinc_finish(0)

</stderr_txt>
]]>

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