Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:15:30 (8027): wrapper (7.7.26015): starting
15:15:30 (8027): wrapper: running run_atlas (--nthreads 8)
[2025-10-05 15:15:30] Arguments: --nthreads 8
[2025-10-05 15:15:30] Threads: 8
[2025-10-05 15:15:30] Checking for CVMFS
[2025-10-05 15:15:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-05 15:15:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-05 15:15:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-05 15:15:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-05 15:15:34] 2.11.2.0 27084 210363 137328 151363 0 61 21983323 25165824 4632 130560 0 114684786 99.876 65590773 3261 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-05 15:15:34] CVMFS is ok
[2025-10-05 15:15:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-05 15:15:34] Checking for apptainer binary...
[2025-10-05 15:15:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-05 15:15:34] Running /usr/bin/apptainer --version
[2025-10-05 15:15:34] apptainer version 1.3.2-1.el7
[2025-10-05 15:15:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-05 15:15:40] cg-vwn405.simple-grid.lan
[2025-10-05 15:15:40] apptainer works
[2025-10-05 15:15:40] Set ATHENA_PROC_NUMBER=8
[2025-10-05 15:15:40] Set ATHENA_CORE_NUMBER=8
[2025-10-05 15:15:40] Starting ATLAS job with PandaID=6827821152
[2025-10-05 15:15:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-05 18:57:56]  *** The last 200 lines of the pilot log: ***
[2025-10-05 18:57:56] 2025-10-05 16:56:49,345 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 18:57:56] 2025-10-05 16:56:49,345 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 18:57:56] 2025-10-05 16:56:49,349 | INFO     | fitting pss+swap vs Time
[2025-10-05 18:57:56] 2025-10-05 16:56:49,350 | INFO     | sum of square deviations: 2671343110.0
[2025-10-05 18:57:56] 2025-10-05 16:56:49,351 | INFO     | sum of deviations: 44911789728.000015
[2025-10-05 18:57:56] 2025-10-05 16:56:49,351 | INFO     | mean x: 1759677065.0
[2025-10-05 18:57:56] 2025-10-05 16:56:49,352 | INFO     | mean y: 2438893.673170732
[2025-10-05 18:57:56] 2025-10-05 16:56:49,352 | INFO     | -- intersect: -29582022210.03889
[2025-10-05 18:57:56] 2025-10-05 16:56:49,352 | INFO     | intersect: -29582022210.03889
[2025-10-05 18:57:56] 2025-10-05 16:56:49,352 | INFO     | chi2: 6.082892100201371
[2025-10-05 18:57:56] 2025-10-05 16:56:49,353 | INFO     | sum of square deviations: 2480604650.0
[2025-10-05 18:57:56] 2025-10-05 16:56:49,354 | INFO     | sum of deviations: 57239512717.50003
[2025-10-05 18:57:56] 2025-10-05 16:56:49,354 | INFO     | mean x: 1759676912.5
[2025-10-05 18:57:56] 2025-10-05 16:56:49,354 | INFO     | mean y: 2448536.675
[2025-10-05 18:57:56] 2025-10-05 16:56:49,354 | INFO     | -- intersect: -40601784391.66968
[2025-10-05 18:57:56] 2025-10-05 16:56:49,354 | INFO     | intersect: -40601784391.66968
[2025-10-05 18:57:56] 2025-10-05 16:56:49,355 | INFO     | chi2: 5.372849655498385
[2025-10-05 18:57:56] 2025-10-05 16:56:49,355 | INFO     | current chi2=5.372849655498385 (change=11.672777241593362 %)
[2025-10-05 18:57:56] 2025-10-05 16:56:49,355 | INFO     | right removable region: 199
[2025-10-05 18:57:56] 2025-10-05 16:56:49,355 | INFO     | sum of square deviations: 2480604650.0
[2025-10-05 18:57:56] 2025-10-05 16:56:49,357 | INFO     | sum of deviations: -22967360893.000004
[2025-10-05 18:57:56] 2025-10-05 16:56:49,357 | INFO     | mean x: 1759677217.5
[2025-10-05 18:57:56] 2025-10-05 16:56:49,357 | INFO     | mean y: 2493098.53
[2025-10-05 18:57:56] 2025-10-05 16:56:49,357 | INFO     | -- intersect: 16294948935.663322
[2025-10-05 18:57:56] 2025-10-05 16:56:49,357 | INFO     | intersect: 16294948935.663322
[2025-10-05 18:57:56] 2025-10-05 16:56:49,358 | INFO     | chi2: 1.6534166402028396
[2025-10-05 18:57:56] 2025-10-05 16:56:49,358 | INFO     | current chi2=1.6534166402028396 (change=72.81857687154924 %)
[2025-10-05 18:57:56] 2025-10-05 16:56:49,358 | INFO     | sum of square deviations: 2299168690.0
[2025-10-05 18:57:56] 2025-10-05 16:56:49,360 | INFO     | sum of deviations: -44385490390.00001
[2025-10-05 18:57:56] 2025-10-05 16:56:49,360 | INFO     | mean x: 1759677370.0
[2025-10-05 18:57:56] 2025-10-05 16:56:49,360 | INFO     | mean y: 2510911.6205128203
[2025-10-05 18:57:56] 2025-10-05 16:56:49,360 | INFO     | -- intersect: 33973112257.812077
[2025-10-05 18:57:56] 2025-10-05 16:56:49,360 | INFO     | intersect: 33973112257.812077
[2025-10-05 18:57:56] 2025-10-05 16:56:49,360 | INFO     | chi2: 0.963670021881484
[2025-10-05 18:57:56] 2025-10-05 16:56:49,361 | INFO     | current chi2=0.963670021881484 (change=41.716443487392155 %)
[2025-10-05 18:57:56] 2025-10-05 16:56:49,361 | INFO     | sum of square deviations: 2126802667.5
[2025-10-05 18:57:56] 2025-10-05 16:56:49,362 | INFO     | sum of deviations: -38862976932.5
[2025-10-05 18:57:56] 2025-10-05 16:56:49,362 | INFO     | mean x: 1759677522.5
[2025-10-05 18:57:56] 2025-10-05 16:56:49,363 | INFO     | mean y: 2506016.668421053
[2025-10-05 18:57:56] 2025-10-05 16:56:49,363 | INFO     | -- intersect: 32157020401.372734
[2025-10-05 18:57:56] 2025-10-05 16:56:49,363 | INFO     | intersect: 32157020401.372734
[2025-10-05 18:57:56] 2025-10-05 16:56:49,363 | INFO     | chi2: 0.9566768233181212
[2025-10-05 18:57:56] 2025-10-05 16:56:49,363 | INFO     | current chi2=0.9566768233181212 (change=0.7256839379219405 %)
[2025-10-05 18:57:56] 2025-10-05 16:56:49,363 | INFO     | left removable region: 30
[2025-10-05 18:57:56] 2025-10-05 16:56:49,364 | INFO     | sum of square deviations: 1496660620.0
[2025-10-05 18:57:56] 2025-10-05 16:56:49,365 | INFO     | sum of deviations: -5928745672.000003
[2025-10-05 18:57:56] 2025-10-05 16:56:49,365 | INFO     | mean x: 1759677797.0
[2025-10-05 18:57:56] 2025-10-05 16:56:49,365 | INFO     | mean y: 2497871.6153846155
[2025-10-05 18:57:56] 2025-10-05 16:56:49,365 | INFO     | -- intersect: 6973137697.147943
[2025-10-05 18:57:56] 2025-10-05 16:56:49,365 | INFO     | intersect: 6973137697.147943
[2025-10-05 18:57:56] 2025-10-05 16:56:49,366 | INFO     | chi2: 0.08092609789329915
[2025-10-05 18:57:56] 2025-10-05 16:56:49,366 | INFO     | -- intersect: 6973137697.147943
[2025-10-05 18:57:56] 2025-10-05 16:56:49,366 | INFO     | current memory leak: -3.96 B/s (using 169 data points, chi2=0.08)
[2025-10-05 18:57:56] 2025-10-05 16:56:49,367 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-10-05 18:57:56] 2025-10-05 16:56:49,367 | INFO     | ..............................
[2025-10-05 18:57:56] 2025-10-05 16:56:49,367 | INFO     | . Timing measurements:
[2025-10-05 18:57:56] 2025-10-05 16:56:49,367 | INFO     | . get job = 0 s
[2025-10-05 18:57:56] 2025-10-05 16:56:49,367 | INFO     | . initial setup = 6 s
[2025-10-05 18:57:56] 2025-10-05 16:56:49,367 | INFO     | . payload setup = 133 s
[2025-10-05 18:57:56] 2025-10-05 16:56:49,367 | INFO     | . stage-in = 0 s
[2025-10-05 18:57:56] 2025-10-05 16:56:49,367 | INFO     | . payload execution = 12623 s
[2025-10-05 18:57:56] 2025-10-05 16:56:49,368 | INFO     | . stage-out = 7 s
[2025-10-05 18:57:56] 2025-10-05 16:56:49,368 | INFO     | . log creation = 0 s
[2025-10-05 18:57:56] 2025-10-05 16:56:49,368 | INFO     | ..............................
[2025-10-05 18:57:56] 2025-10-05 16:56:49,507 | INFO     | 
[2025-10-05 18:57:56] 2025-10-05 16:56:49,508 | INFO     | job summary report
[2025-10-05 18:57:56] 2025-10-05 16:56:49,508 | INFO     | --------------------------------------------------
[2025-10-05 18:57:56] 2025-10-05 16:56:49,508 | INFO     | PanDA job id: 6827821152
[2025-10-05 18:57:56] 2025-10-05 16:56:49,508 | INFO     | task id: 46376905
[2025-10-05 18:57:56] 2025-10-05 16:56:49,508 | INFO     | errors: (none)
[2025-10-05 18:57:56] 2025-10-05 16:56:49,508 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-05 18:57:56] 2025-10-05 16:56:49,508 | INFO     | pilot state: finished 
[2025-10-05 18:57:56] 2025-10-05 16:56:49,508 | INFO     | transexitcode: 0
[2025-10-05 18:57:56] 2025-10-05 16:56:49,508 | INFO     | exeerrorcode: 0
[2025-10-05 18:57:56] 2025-10-05 16:56:49,508 | INFO     | exeerrordiag: 
[2025-10-05 18:57:56] 2025-10-05 16:56:49,509 | INFO     | exitcode: 0
[2025-10-05 18:57:56] 2025-10-05 16:56:49,509 | INFO     | exitmsg: OK
[2025-10-05 18:57:56] 2025-10-05 16:56:49,509 | INFO     | cpuconsumptiontime: 46358 s
[2025-10-05 18:57:56] 2025-10-05 16:56:49,509 | INFO     | nevents: 400
[2025-10-05 18:57:56] 2025-10-05 16:56:49,509 | INFO     | neventsw: 0
[2025-10-05 18:57:56] 2025-10-05 16:56:49,509 | INFO     | pid: 18383
[2025-10-05 18:57:56] 2025-10-05 16:56:49,509 | INFO     | pgrp: 18383
[2025-10-05 18:57:56] 2025-10-05 16:56:49,509 | INFO     | corecount: 8
[2025-10-05 18:57:56] 2025-10-05 16:56:49,509 | INFO     | event service: False
[2025-10-05 18:57:56] 2025-10-05 16:56:49,509 | INFO     | sizes: {0: 2348645, 1: 2348844, 12: 2348844, 23: 2348872, 33: 2348900, 44: 2348956, 55: 2349112, 66: 2349140, 76: 2349168, 87: 2349224, 95: 2349514, 98: 2349822, 1
[2025-10-05 18:57:56] 2025-10-05 16:56:49,509 | INFO     | --------------------------------------------------
[2025-10-05 18:57:56] 2025-10-05 16:56:49,509 | INFO     | 
[2025-10-05 18:57:56] 2025-10-05 16:56:49,510 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-10-05 18:57:56] 2025-10-05 16:56:49,953 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-05 18:57:56] 2025-10-05 16:56:49,953 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-05 18:57:56] 2025-10-05 16:56:49,953 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-05 18:57:56] 2025-10-05 16:56:49,953 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-05 18:57:56] 2025-10-05 16:56:49,954 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-05 18:57:56] 2025-10-05 16:56:49,954 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-05 18:57:56] 2025-10-05 16:56:49,954 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-05 18:57:56] 2025-10-05 16:56:49,954 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-05 18:57:56] 2025-10-05 16:56:49,954 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-05 18:57:56] 2025-10-05 16:56:49,954 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-05 18:57:56] 2025-10-05 16:56:49,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-05 18:57:56] 2025-10-05 16:56:49,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-05 18:57:56] 2025-10-05 16:56:49,955 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-05 18:57:56] 2025-10-05 16:56:49,955 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-05 18:57:56] 2025-10-05 16:56:49,955 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-05 18:57:56] 2025-10-05 16:56:49,955 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-05 18:57:56] 2025-10-05 16:56:49,955 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-05 18:57:56] 2025-10-05 16:56:49,955 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-05 18:57:56] 2025-10-05 16:56:49,955 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-05 18:57:56] 2025-10-05 16:56:49,955 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-05 18:57:56] 2025-10-05 16:56:49,956 | INFO     | job 6827821152 has completed (purged errors)
[2025-10-05 18:57:56] 2025-10-05 16:56:49,956 | INFO     | overall cleanup function is called
[2025-10-05 18:57:56] 2025-10-05 16:56:50,964 | INFO     | --- collectZombieJob: --- 10, [18383]
[2025-10-05 18:57:56] 2025-10-05 16:56:50,965 | INFO     | zombie collector waiting for pid 18383
[2025-10-05 18:57:56] 2025-10-05 16:56:50,965 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-05 18:57:56] 2025-10-05 16:56:50,965 | INFO     | collected zombie processes
[2025-10-05 18:57:56] 2025-10-05 16:56:50,965 | INFO     | will attempt to kill all subprocesses of pid=18383
[2025-10-05 18:57:56] 2025-10-05 16:56:51,076 | INFO     | process IDs to be killed: [18383] (in reverse order)
[2025-10-05 18:57:56] 2025-10-05 16:56:51,605 | WARNING  | found no corresponding commands to process id(s)
[2025-10-05 18:57:56] 2025-10-05 16:56:51,605 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-05 18:57:56] 2025-10-05 16:56:51,608 | INFO     | did not find any defunct processes belonging to 18383
[2025-10-05 18:57:56] 2025-10-05 16:56:51,617 | INFO     | did not find any defunct processes belonging to 18383
[2025-10-05 18:57:56] 2025-10-05 16:56:51,617 | INFO     | ready for new job
[2025-10-05 18:57:56] 2025-10-05 16:56:51,617 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-05 18:57:56] 2025-10-05 16:56:51,619 | INFO     | ***************************************
[2025-10-05 18:57:56] 2025-10-05 16:56:51,620 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-05 18:57:56] 2025-10-05 16:56:51,620 | INFO     | ***************************************
[2025-10-05 18:57:56] 2025-10-05 16:56:51,620 | INFO     | 
[2025-10-05 18:57:56] 2025-10-05 16:56:51,620 | INFO     | pilot is running in a VM
[2025-10-05 18:57:56] 2025-10-05 16:56:51,620 | INFO     | architecture information:
[2025-10-05 18:57:56] 2025-10-05 16:56:51,632 | INFO     | executing command: cat /etc/os-release
[2025-10-05 18:57:56] 2025-10-05 16:56:51,915 | INFO     | cat /etc/os-release:
[2025-10-05 18:57:56] NAME="CentOS Linux"
[2025-10-05 18:57:56] VERSION="7 (Core)"
[2025-10-05 18:57:56] ID="centos"
[2025-10-05 18:57:56] ID_LIKE="rhel fedora"
[2025-10-05 18:57:56] VERSION_ID="7"
[2025-10-05 18:57:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-05 18:57:56] ANSI_COLOR="0;31"
[2025-10-05 18:57:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-05 18:57:56] HOME_URL="https://www.centos.org/"
[2025-10-05 18:57:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-05 18:57:56] 
[2025-10-05 18:57:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-05 18:57:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-05 18:57:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-05 18:57:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-05 18:57:56] 
[2025-10-05 18:57:56] 2025-10-05 16:56:51,915 | INFO     | ***************************************
[2025-10-05 18:57:56] 2025-10-05 16:56:52,419 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-10-05 18:57:56] 2025-10-05 16:56:52,597 | INFO     | sufficient remaining disk space (494924726272 B)
[2025-10-05 18:57:56] 2025-10-05 16:56:52,598 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-05 18:57:56] 2025-10-05 16:56:52,598 | INFO     | current server update state: UPDATING_FINAL
[2025-10-05 18:57:56] 2025-10-05 16:56:52,598 | INFO     | update_server=False
[2025-10-05 18:57:56] 2025-10-05 16:56:52,598 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-05 18:57:56] 2025-10-05 16:56:52,598 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-05 18:57:56] 2025-10-05 16:56:52,598 | INFO     | aborting loop
[2025-10-05 18:57:56] 2025-10-05 16:56:53,077 | INFO     | all data control threads have been joined
[2025-10-05 18:57:56] 2025-10-05 16:56:53,106 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-05 18:57:56] 2025-10-05 16:56:53,603 | INFO     | [job] retrieve thread has finished
[2025-10-05 18:57:56] 2025-10-05 16:56:53,604 | INFO     | [job] job monitor thread has finished
[2025-10-05 18:57:56] 2025-10-05 16:56:53,615 | INFO     | all payload control threads have been joined
[2025-10-05 18:57:56] 2025-10-05 16:56:53,661 | INFO     | all job control threads have been joined
[2025-10-05 18:57:56] 2025-10-05 16:56:53,840 | INFO     | [data] copytool_in thread has finished
[2025-10-05 18:57:56] 2025-10-05 16:56:53,991 | INFO     | [payload] execute_payloads thread has finished
[2025-10-05 18:57:56] 2025-10-05 16:56:54,083 | INFO     | [data] control thread has finished
[2025-10-05 18:57:56] 2025-10-05 16:56:54,403 | INFO     | [payload] validate_post thread has finished
[2025-10-05 18:57:56] 2025-10-05 16:56:54,521 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-05 18:57:56] 2025-10-05 16:56:54,574 | INFO     | [job] create_data_payload thread has finished
[2025-10-05 18:57:56] 2025-10-05 16:56:54,621 | INFO     | [payload] control thread has finished
[2025-10-05 18:57:56] 2025-10-05 16:56:54,666 | INFO     | [job] control thread has finished
[2025-10-05 18:57:56] 2025-10-05 16:56:54,845 | INFO     | [payload] failed_post thread has finished
[2025-10-05 18:57:56] 2025-10-05 16:56:54,915 | INFO     | [job] validate thread has finished
[2025-10-05 18:57:56] 2025-10-05 16:56:54,937 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-05 18:57:56] 2025-10-05 16:56:55,027 | INFO     | [payload] validate_pre thread has finished
[2025-10-05 18:57:56] 2025-10-05 16:56:55,104 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-05 18:57:56] 2025-10-05 16:56:55,115 | INFO     | [data] copytool_out thread has finished
[2025-10-05 18:57:56] 2025-10-05 16:56:55,527 | INFO     | [job] queue monitor thread has finished
[2025-10-05 18:57:56] 2025-10-05 16:56:59,113 | INFO     | [data] queue_monitor thread has finished
[2025-10-05 18:57:56] 2025-10-05 16:57:21,476 | INFO     | PID=11812 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-05 18:57:56] 2025-10-05 16:57:21,476 | INFO     | .. there are 9 such processes running
[2025-10-05 18:57:56] 2025-10-05 16:57:21,477 | INFO     | found 0 job(s) in 20 queues
[2025-10-05 18:57:56] 2025-10-05 16:57:21,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-05 18:57:56] 2025-10-05 16:57:21,477 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-05 18:57:56] 2025-10-05 16:57:48,437 | INFO     | [monitor] cgroup control has ended
[2025-10-05 18:57:56] 2025-10-05 16:57:49,031 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140688378656576)>', '<ExcThread(monitor, started 140687945225984)>']
[2025-10-05 18:57:56] 2025-10-05 16:57:49,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-05 18:57:56] 2025-10-05 16:57:49,648 | INFO     | [monitor] control thread has ended
[2025-10-05 18:57:56] 2025-10-05 16:57:54,056 | INFO     | all workflow threads have been joined
[2025-10-05 18:57:56] 2025-10-05 16:57:54,057 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-05 18:57:56] 2025-10-05 16:57:54,057 | INFO     | traces error code: 0
[2025-10-05 18:57:56] 2025-10-05 16:57:54,057 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-05 18:57:56] 2025-10-05 16:57:54,499 [wrapper] ==== pilot stdout END ====
[2025-10-05 18:57:56] 2025-10-05 16:57:54,597 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-05 18:57:56] 2025-10-05 16:57:54,688 [wrapper] pilotpid: 11812
[2025-10-05 18:57:56] 2025-10-05 16:57:54,731 [wrapper] Pilot exit status: 0
[2025-10-05 18:57:56] 2025-10-05 16:57:55,024 [wrapper] pandaids: 6827821152
[2025-10-05 18:57:56] 2025-10-05 16:57:55,438 [wrapper] cleanup supervisor_pilot  9851 11813
[2025-10-05 18:57:56] 2025-10-05 16:57:55,470 [wrapper] Test setup, not cleaning
[2025-10-05 18:57:56] 2025-10-05 16:57:55,544 [wrapper] apfmon messages muted
[2025-10-05 18:57:56] 2025-10-05 16:57:55,569 [wrapper] ==== wrapper stdout END ====
[2025-10-05 18:57:56] 2025-10-05 16:57:55,653 [wrapper] ==== wrapper stderr END ====
[2025-10-05 18:57:56]  *** Error codes and diagnostics ***
[2025-10-05 18:57:56]     "exeErrorCode": 0,
[2025-10-05 18:57:56]     "exeErrorDiag": "",
[2025-10-05 18:57:56]     "pilotErrorCode": 0,
[2025-10-05 18:57:56]     "pilotErrorDiag": "",
[2025-10-05 18:57:56]  *** Listing of results directory ***
[2025-10-05 18:57:56] total 386472
[2025-10-05 18:57:56] -rw-r--r--. 1 boinc boinc    552446 Oct  3 05:15 pilot3.tar.gz
[2025-10-05 18:57:56] -rw-r--r--. 1 boinc boinc      5112 Oct  3 05:27 queuedata.json
[2025-10-05 18:57:56] -rwx------. 1 boinc boinc     36292 Oct  3 05:29 runpilot2-wrapper.sh
[2025-10-05 18:57:56] -rw-r--r--. 1 boinc boinc       100 Oct  5 15:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-05 18:57:56] -rwxr-xr-x. 1 boinc boinc      7986 Oct  5 15:15 run_atlas
[2025-10-05 18:57:56] -rw-r--r--. 1 boinc boinc       105 Oct  5 15:15 job.xml
[2025-10-05 18:57:56] -rw-r--r--. 2 boinc boinc 212832978 Oct  5 15:15 EVNT.46376901._001201.pool.root.1
[2025-10-05 18:57:56] -rw-r--r--. 2 boinc boinc     15120 Oct  5 15:15 start_atlas.sh
[2025-10-05 18:57:56] drwxrwx--x. 2 boinc boinc        68 Oct  5 15:15 shared
[2025-10-05 18:57:56] -rw-r--r--. 2 boinc boinc    565603 Oct  5 15:15 input.tar.gz
[2025-10-05 18:57:56] -rw-r--r--. 1 boinc boinc         0 Oct  5 15:15 boinc_lockfile
[2025-10-05 18:57:56] -rw-r--r--. 1 boinc boinc      2519 Oct  5 15:15 pandaJob.out
[2025-10-05 18:57:56] -rw-------. 1 boinc boinc    973982 Oct  5 15:19 agis_schedconf.cvmfs.json
[2025-10-05 18:57:56] drwx------. 4 boinc boinc      4096 Oct  5 15:19 pilot3
[2025-10-05 18:57:56] -rw-r--r--. 1 boinc boinc      6397 Oct  5 16:18 init_data.xml
[2025-10-05 18:57:56] -rw-------. 1 boinc boinc 174677629 Oct  5 18:53 HITS.46376905._035869.pool.root.1
[2025-10-05 18:57:56] -rw-r--r--. 1 boinc boinc       531 Oct  5 18:54 boinc_task_state.xml
[2025-10-05 18:57:56] -rw-------. 1 boinc boinc      1014 Oct  5 18:55 memory_monitor_summary.json
[2025-10-05 18:57:56] -rw-------. 1 boinc boinc   1560401 Oct  5 18:55 agis_ddmendpoints.agis.ALL.json
[2025-10-05 18:57:56] -rw-------. 1 boinc boinc    444089 Oct  5 18:55 log.46376905._035869.job.log.tgz.1
[2025-10-05 18:57:56] -rw-------. 1 boinc boinc        95 Oct  5 18:56 pilot_heartbeat.json
[2025-10-05 18:57:56] -rw-------. 1 boinc boinc      7777 Oct  5 18:56 heartbeat.json
[2025-10-05 18:57:56] -rw-r--r--. 1 boinc boinc      8192 Oct  5 18:57 boinc_mmap_file
[2025-10-05 18:57:56] -rw-r--r--. 1 boinc boinc        28 Oct  5 18:57 wrapper_checkpoint.txt
[2025-10-05 18:57:56] -rw-------. 1 boinc boinc      4884 Oct  5 18:57 pilotlog.txt
[2025-10-05 18:57:56] -rw-------. 1 boinc boinc   1738111 Oct  5 18:57 log.46376905._035869.job.log.1
[2025-10-05 18:57:56] -rw-------. 1 boinc boinc       357 Oct  5 18:57 output.list
[2025-10-05 18:57:56] -rw-r--r--. 1 boinc boinc       620 Oct  5 18:57 runtime_log
[2025-10-05 18:57:56] -rw-------. 1 boinc boinc   2201600 Oct  5 18:57 result.tar.gz
[2025-10-05 18:57:56] -rw-r--r--. 1 boinc boinc      8703 Oct  5 18:57 runtime_log.err
[2025-10-05 18:57:56] -rw-------. 1 boinc boinc       657 Oct  5 18:57 8nbNDmGflO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0dGNDmmGFnGn.diag
[2025-10-05 18:57:56] -rw-r--r--. 1 boinc boinc     20600 Oct  5 18:57 stderr.txt
[2025-10-05 18:57:57] HITS file was successfully produced:
[2025-10-05 18:57:57] -rw-------. 1 boinc boinc 174677629 Oct  5 18:53 shared/HITS.pool.root.1
[2025-10-05 18:57:57]  *** Contents of shared directory: ***
[2025-10-05 18:57:57] total 381156
[2025-10-05 18:57:57] -rw-r--r--. 2 boinc boinc 212832978 Oct  5 15:15 ATLAS.root_0
[2025-10-05 18:57:57] -rw-r--r--. 2 boinc boinc     15120 Oct  5 15:15 start_atlas.sh
[2025-10-05 18:57:57] -rw-r--r--. 2 boinc boinc    565603 Oct  5 15:15 input.tar.gz
[2025-10-05 18:57:57] -rw-------. 1 boinc boinc 174677629 Oct  5 18:53 HITS.pool.root.1
[2025-10-05 18:57:57] -rw-------. 1 boinc boinc   2201600 Oct  5 18:57 result.tar.gz
18:57:58 (8027): run_atlas exited; CPU time 46534.544233
18:57:58 (8027): called boinc_finish(0)

</stderr_txt>
]]>

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