Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:05:44 (31980): wrapper (7.7.26015): starting
05:05:44 (31980): wrapper: running run_atlas (--nthreads 8)
[2025-10-05 05:05:44] Arguments: --nthreads 8
[2025-10-05 05:05:44] Threads: 8
[2025-10-05 05:05:44] Checking for CVMFS
[2025-10-05 05:05:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-05 05:05:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-05 05:05:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-05 05:05:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-05 05:05:46] 2.11.2.0 4078 96733 108396 151348 3 60 24618529 25165824 4632 130560 0 33628490 99.924 14193853 2738 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-05 05:05:46] CVMFS is ok
[2025-10-05 05:05:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-05 05:05:46] Checking for apptainer binary...
[2025-10-05 05:05:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-05 05:05:46] Running /usr/bin/apptainer --version
[2025-10-05 05:05:46] apptainer version 1.3.2-1.el7
[2025-10-05 05:05:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-05 05:05:54] cg-vwn277.simple-grid.lan
[2025-10-05 05:05:54] apptainer works
[2025-10-05 05:05:54] Set ATHENA_PROC_NUMBER=8
[2025-10-05 05:05:54] Set ATHENA_CORE_NUMBER=8
[2025-10-05 05:05:54] Starting ATLAS job with PandaID=6827820805
[2025-10-05 05:05:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-05 08:47:04]  *** The last 200 lines of the pilot log: ***
[2025-10-05 08:47:04] 2025-10-05 06:46:27,328 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-05 08:47:04] 2025-10-05 06:46:27,329 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-10-05 08:47:04] 2025-10-05 06:46:27,331 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6827820805/memory_monitor_summary.json (trf name=prmon)
[2025-10-05 08:47:04] 2025-10-05 06:46:27,331 | INFO     | extracted standard info from prmon json
[2025-10-05 08:47:04] 2025-10-05 06:46:27,331 | INFO     | extracted standard memory fields from prmon json
[2025-10-05 08:47:04] 2025-10-05 06:46:27,332 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-05 08:47:04] 2025-10-05 06:46:27,332 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 08:47:04] 2025-10-05 06:46:27,332 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 08:47:04] 2025-10-05 06:46:27,336 | INFO     | fitting pss+swap vs Time
[2025-10-05 08:47:04] 2025-10-05 06:46:27,337 | INFO     | sum of square deviations: 2632440055.0
[2025-10-05 08:47:04] 2025-10-05 06:46:27,338 | INFO     | sum of deviations: 9442325389.500011
[2025-10-05 08:47:04] 2025-10-05 06:46:27,339 | INFO     | mean x: 1759640433.5
[2025-10-05 08:47:04] 2025-10-05 06:46:27,339 | INFO     | mean y: 2481291.7009803923
[2025-10-05 08:47:04] 2025-10-05 06:46:27,339 | INFO     | -- intersect: -6309190463.20546
[2025-10-05 08:47:04] 2025-10-05 06:46:27,339 | INFO     | intersect: -6309190463.20546
[2025-10-05 08:47:04] 2025-10-05 06:46:27,339 | INFO     | chi2: 5.49145451780151
[2025-10-05 08:47:04] 2025-10-05 06:46:27,340 | INFO     | sum of square deviations: 2443580700.0
[2025-10-05 08:47:04] 2025-10-05 06:46:27,345 | INFO     | sum of deviations: 23854966524.999992
[2025-10-05 08:47:04] 2025-10-05 06:46:27,346 | INFO     | mean x: 1759640281.0
[2025-10-05 08:47:04] 2025-10-05 06:46:27,346 | INFO     | mean y: 2492701.281407035
[2025-10-05 08:47:04] 2025-10-05 06:46:27,346 | INFO     | -- intersect: -17175642647.101637
[2025-10-05 08:47:04] 2025-10-05 06:46:27,346 | INFO     | intersect: -17175642647.101637
[2025-10-05 08:47:04] 2025-10-05 06:46:27,346 | INFO     | chi2: 4.672716707424534
[2025-10-05 08:47:04] 2025-10-05 06:46:27,347 | INFO     | current chi2=4.672716707424534 (change=14.90930695543219 %)
[2025-10-05 08:47:04] 2025-10-05 06:46:27,347 | INFO     | right removable region: 198
[2025-10-05 08:47:04] 2025-10-05 06:46:27,347 | INFO     | sum of square deviations: 2443580700.0
[2025-10-05 08:47:04] 2025-10-05 06:46:27,348 | INFO     | sum of deviations: -55841922594.0
[2025-10-05 08:47:04] 2025-10-05 06:46:27,349 | INFO     | mean x: 1759640586.0
[2025-10-05 08:47:04] 2025-10-05 06:46:27,349 | INFO     | mean y: 2533896.638190955
[2025-10-05 08:47:04] 2025-10-05 06:46:27,349 | INFO     | -- intersect: 40214716533.64822
[2025-10-05 08:47:04] 2025-10-05 06:46:27,349 | INFO     | intersect: 40214716533.64822
[2025-10-05 08:47:04] 2025-10-05 06:46:27,349 | INFO     | chi2: 1.460804012530711
[2025-10-05 08:47:04] 2025-10-05 06:46:27,349 | INFO     | current chi2=1.460804012530711 (change=73.3985958038028 %)
[2025-10-05 08:47:04] 2025-10-05 06:46:27,350 | INFO     | sum of square deviations: 2263977332.5
[2025-10-05 08:47:04] 2025-10-05 06:46:27,351 | INFO     | sum of deviations: -69936162304.0
[2025-10-05 08:47:04] 2025-10-05 06:46:27,351 | INFO     | mean x: 1759640738.5
[2025-10-05 08:47:04] 2025-10-05 06:46:27,351 | INFO     | mean y: 2545734.4226804124
[2025-10-05 08:47:04] 2025-10-05 06:46:27,351 | INFO     | -- intersect: 54359326837.25045
[2025-10-05 08:47:04] 2025-10-05 06:46:27,351 | INFO     | intersect: 54359326837.25045
[2025-10-05 08:47:04] 2025-10-05 06:46:27,352 | INFO     | chi2: 1.0973496297781455
[2025-10-05 08:47:04] 2025-10-05 06:46:27,352 | INFO     | current chi2=1.0973496297781455 (change=24.880434311164954 %)
[2025-10-05 08:47:04] 2025-10-05 06:46:27,352 | INFO     | left removable region: 20
[2025-10-05 08:47:04] 2025-10-05 06:46:27,352 | INFO     | sum of square deviations: 1748737904.5
[2025-10-05 08:47:04] 2025-10-05 06:46:27,354 | INFO     | sum of deviations: -46150071153.499985
[2025-10-05 08:47:04] 2025-10-05 06:46:27,354 | INFO     | mean x: 1759640860.5
[2025-10-05 08:47:04] 2025-10-05 06:46:27,354 | INFO     | mean y: 2552058.893258427
[2025-10-05 08:47:04] 2025-10-05 06:46:27,354 | INFO     | -- intersect: 46440357694.43808
[2025-10-05 08:47:04] 2025-10-05 06:46:27,354 | INFO     | intersect: 46440357694.43808
[2025-10-05 08:47:04] 2025-10-05 06:46:27,354 | INFO     | chi2: 0.1813412770039676
[2025-10-05 08:47:04] 2025-10-05 06:46:27,354 | INFO     | -- intersect: 46440357694.43808
[2025-10-05 08:47:04] 2025-10-05 06:46:27,355 | INFO     | current memory leak: -26.39 B/s (using 178 data points, chi2=0.18)
[2025-10-05 08:47:04] 2025-10-05 06:46:27,355 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-10-05 08:47:04] 2025-10-05 06:46:27,355 | INFO     | ..............................
[2025-10-05 08:47:04] 2025-10-05 06:46:27,355 | INFO     | . Timing measurements:
[2025-10-05 08:47:04] 2025-10-05 06:46:27,356 | INFO     | . get job = 0 s
[2025-10-05 08:47:04] 2025-10-05 06:46:27,356 | INFO     | . initial setup = 15 s
[2025-10-05 08:47:04] 2025-10-05 06:46:27,356 | INFO     | . payload setup = 132 s
[2025-10-05 08:47:04] 2025-10-05 06:46:27,356 | INFO     | . stage-in = 0 s
[2025-10-05 08:47:04] 2025-10-05 06:46:27,356 | INFO     | . payload execution = 12595 s
[2025-10-05 08:47:04] 2025-10-05 06:46:27,356 | INFO     | . stage-out = 3 s
[2025-10-05 08:47:04] 2025-10-05 06:46:27,356 | INFO     | . log creation = 1 s
[2025-10-05 08:47:04] 2025-10-05 06:46:27,356 | INFO     | ..............................
[2025-10-05 08:47:04] 2025-10-05 06:46:27,608 | INFO     | 
[2025-10-05 08:47:04] 2025-10-05 06:46:27,608 | INFO     | job summary report
[2025-10-05 08:47:04] 2025-10-05 06:46:27,608 | INFO     | --------------------------------------------------
[2025-10-05 08:47:04] 2025-10-05 06:46:27,609 | INFO     | PanDA job id: 6827820805
[2025-10-05 08:47:04] 2025-10-05 06:46:27,609 | INFO     | task id: 46376905
[2025-10-05 08:47:04] 2025-10-05 06:46:27,609 | INFO     | errors: (none)
[2025-10-05 08:47:04] 2025-10-05 06:46:27,609 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-05 08:47:04] 2025-10-05 06:46:27,609 | INFO     | pilot state: finished 
[2025-10-05 08:47:04] 2025-10-05 06:46:27,609 | INFO     | transexitcode: 0
[2025-10-05 08:47:04] 2025-10-05 06:46:27,609 | INFO     | exeerrorcode: 0
[2025-10-05 08:47:04] 2025-10-05 06:46:27,609 | INFO     | exeerrordiag: 
[2025-10-05 08:47:04] 2025-10-05 06:46:27,609 | INFO     | exitcode: 0
[2025-10-05 08:47:04] 2025-10-05 06:46:27,609 | INFO     | exitmsg: OK
[2025-10-05 08:47:04] 2025-10-05 06:46:27,610 | INFO     | cpuconsumptiontime: 47267 s
[2025-10-05 08:47:04] 2025-10-05 06:46:27,610 | INFO     | nevents: 400
[2025-10-05 08:47:04] 2025-10-05 06:46:27,610 | INFO     | neventsw: 0
[2025-10-05 08:47:04] 2025-10-05 06:46:27,610 | INFO     | pid: 9956
[2025-10-05 08:47:04] 2025-10-05 06:46:27,610 | INFO     | pgrp: 9956
[2025-10-05 08:47:04] 2025-10-05 06:46:27,610 | INFO     | corecount: 8
[2025-10-05 08:47:04] 2025-10-05 06:46:27,610 | INFO     | event service: False
[2025-10-05 08:47:04] 2025-10-05 06:46:27,610 | INFO     | sizes: {0: 2347988, 1: 2348673, 2: 2348872, 13: 2348872, 23: 2348928, 34: 2348956, 45: 2349112, 56: 2349140, 66: 2349168, 77: 2349196, 88: 2349252, 99: 2349822, 10
[2025-10-05 08:47:04] 2025-10-05 06:46:27,610 | INFO     | --------------------------------------------------
[2025-10-05 08:47:04] 2025-10-05 06:46:27,610 | INFO     | 
[2025-10-05 08:47:04] 2025-10-05 06:46:27,611 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-10-05 08:47:04] 2025-10-05 06:46:28,071 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-05 08:47:04] 2025-10-05 06:46:28,072 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-05 08:47:04] 2025-10-05 06:46:28,072 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-05 08:47:04] 2025-10-05 06:46:28,072 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-05 08:47:04] 2025-10-05 06:46:28,072 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-05 08:47:04] 2025-10-05 06:46:28,072 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-05 08:47:04] 2025-10-05 06:46:28,073 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-05 08:47:04] 2025-10-05 06:46:28,073 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-05 08:47:04] 2025-10-05 06:46:28,073 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-05 08:47:04] 2025-10-05 06:46:28,073 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-05 08:47:04] 2025-10-05 06:46:28,073 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-05 08:47:04] 2025-10-05 06:46:28,073 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-05 08:47:04] 2025-10-05 06:46:28,073 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-05 08:47:04] 2025-10-05 06:46:28,073 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-05 08:47:04] 2025-10-05 06:46:28,073 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-05 08:47:04] 2025-10-05 06:46:28,074 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-05 08:47:04] 2025-10-05 06:46:28,074 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-05 08:47:04] 2025-10-05 06:46:28,074 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-05 08:47:04] 2025-10-05 06:46:28,074 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-05 08:47:04] 2025-10-05 06:46:28,074 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-05 08:47:04] 2025-10-05 06:46:28,074 | INFO     | job 6827820805 has completed (purged errors)
[2025-10-05 08:47:04] 2025-10-05 06:46:28,074 | INFO     | overall cleanup function is called
[2025-10-05 08:47:04] 2025-10-05 06:46:29,083 | INFO     | --- collectZombieJob: --- 10, [9956]
[2025-10-05 08:47:04] 2025-10-05 06:46:29,083 | INFO     | zombie collector waiting for pid 9956
[2025-10-05 08:47:04] 2025-10-05 06:46:29,084 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-05 08:47:04] 2025-10-05 06:46:29,084 | INFO     | collected zombie processes
[2025-10-05 08:47:04] 2025-10-05 06:46:29,084 | INFO     | will attempt to kill all subprocesses of pid=9956
[2025-10-05 08:47:04] 2025-10-05 06:46:29,201 | INFO     | process IDs to be killed: [9956] (in reverse order)
[2025-10-05 08:47:04] 2025-10-05 06:46:29,812 | WARNING  | found no corresponding commands to process id(s)
[2025-10-05 08:47:04] 2025-10-05 06:46:29,812 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-05 08:47:04] 2025-10-05 06:46:29,816 | INFO     | did not find any defunct processes belonging to 9956
[2025-10-05 08:47:04] 2025-10-05 06:46:29,819 | INFO     | did not find any defunct processes belonging to 9956
[2025-10-05 08:47:04] 2025-10-05 06:46:29,819 | INFO     | ready for new job
[2025-10-05 08:47:04] 2025-10-05 06:46:29,819 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-05 08:47:04] 2025-10-05 06:46:29,821 | INFO     | ***************************************
[2025-10-05 08:47:04] 2025-10-05 06:46:29,821 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-05 08:47:04] 2025-10-05 06:46:29,821 | INFO     | ***************************************
[2025-10-05 08:47:04] 2025-10-05 06:46:29,821 | INFO     | 
[2025-10-05 08:47:04] 2025-10-05 06:46:29,830 | INFO     | pilot is running in a VM
[2025-10-05 08:47:04] 2025-10-05 06:46:29,831 | INFO     | architecture information:
[2025-10-05 08:47:04] 2025-10-05 06:46:29,849 | INFO     | executing command: cat /etc/os-release
[2025-10-05 08:47:04] 2025-10-05 06:46:30,302 | INFO     | cat /etc/os-release:
[2025-10-05 08:47:04] NAME="CentOS Linux"
[2025-10-05 08:47:04] VERSION="7 (Core)"
[2025-10-05 08:47:04] ID="centos"
[2025-10-05 08:47:04] ID_LIKE="rhel fedora"
[2025-10-05 08:47:04] VERSION_ID="7"
[2025-10-05 08:47:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-05 08:47:04] ANSI_COLOR="0;31"
[2025-10-05 08:47:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-05 08:47:04] HOME_URL="https://www.centos.org/"
[2025-10-05 08:47:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-05 08:47:04] 
[2025-10-05 08:47:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-05 08:47:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-05 08:47:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-05 08:47:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-05 08:47:04] 
[2025-10-05 08:47:04] 2025-10-05 06:46:30,302 | INFO     | ***************************************
[2025-10-05 08:47:04] 2025-10-05 06:46:30,805 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-10-05 08:47:04] 2025-10-05 06:46:31,046 | INFO     | sufficient remaining disk space (494861811712 B)
[2025-10-05 08:47:04] 2025-10-05 06:46:31,046 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-05 08:47:04] 2025-10-05 06:46:31,047 | INFO     | current server update state: UPDATING_FINAL
[2025-10-05 08:47:04] 2025-10-05 06:46:31,047 | INFO     | update_server=False
[2025-10-05 08:47:04] 2025-10-05 06:46:31,047 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-05 08:47:04] 2025-10-05 06:46:31,048 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-05 08:47:04] 2025-10-05 06:46:31,048 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-05 08:47:04] 2025-10-05 06:46:31,492 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-05 08:47:04] 2025-10-05 06:46:31,492 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-05 08:47:04] 2025-10-05 06:46:31,492 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-05 08:47:04] 2025-10-05 06:46:31,493 | INFO     | will abort loop
[2025-10-05 08:47:04] 2025-10-05 06:46:31,822 | INFO     | all data control threads have been joined
[2025-10-05 08:47:04] 2025-10-05 06:46:31,960 | INFO     | all payload control threads have been joined
[2025-10-05 08:47:04] 2025-10-05 06:46:32,053 | INFO     | [job] retrieve thread has finished
[2025-10-05 08:47:04] 2025-10-05 06:46:32,061 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-05 08:47:04] 2025-10-05 06:46:32,497 | INFO     | [job] job monitor thread has finished
[2025-10-05 08:47:04] 2025-10-05 06:46:32,503 | INFO     | [job] validate thread has finished
[2025-10-05 08:47:04] 2025-10-05 06:46:32,507 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-05 08:47:04] 2025-10-05 06:46:32,553 | INFO     | [payload] validate_post thread has finished
[2025-10-05 08:47:04] 2025-10-05 06:46:32,763 | INFO     | all job control threads have been joined
[2025-10-05 08:47:04] 2025-10-05 06:46:32,784 | INFO     | [job] create_data_payload thread has finished
[2025-10-05 08:47:04] 2025-10-05 06:46:32,828 | INFO     | [data] control thread has finished
[2025-10-05 08:47:04] 2025-10-05 06:46:32,966 | INFO     | [payload] control thread has finished
[2025-10-05 08:47:04] 2025-10-05 06:46:33,056 | INFO     | [data] copytool_out thread has finished
[2025-10-05 08:47:04] 2025-10-05 06:46:33,187 | INFO     | [payload] execute_payloads thread has finished
[2025-10-05 08:47:04] 2025-10-05 06:46:33,239 | INFO     | [payload] validate_pre thread has finished
[2025-10-05 08:47:04] 2025-10-05 06:46:33,488 | INFO     | [data] copytool_in thread has finished
[2025-10-05 08:47:04] 2025-10-05 06:46:33,513 | INFO     | [job] queue monitor thread has finished
[2025-10-05 08:47:04] 2025-10-05 06:46:33,639 | INFO     | [payload] failed_post thread has finished
[2025-10-05 08:47:04] 2025-10-05 06:46:33,769 | INFO     | [job] control thread has finished
[2025-10-05 08:47:04] 2025-10-05 06:46:35,059 | INFO     | [data] queue_monitor thread has finished
[2025-10-05 08:47:04] 2025-10-05 06:46:38,164 | INFO     | [monitor] cgroup control has ended
[2025-10-05 08:47:04] 2025-10-05 06:46:38,465 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140530355418944)>', '<ExcThread(monitor, started 140529778026240)>']
[2025-10-05 08:47:04] 2025-10-05 06:46:43,491 | INFO     | all workflow threads have been joined
[2025-10-05 08:47:04] 2025-10-05 06:46:43,491 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-05 08:47:04] 2025-10-05 06:46:43,492 | INFO     | traces error code: 0
[2025-10-05 08:47:04] 2025-10-05 06:46:43,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-05 08:47:04] 2025-10-05 06:47:00,348 | INFO     | PID=3388 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-05 08:47:04] 2025-10-05 06:47:00,349 | INFO     | .. there are 9 such processes running
[2025-10-05 08:47:04] 2025-10-05 06:47:00,349 | INFO     | found 0 job(s) in 20 queues
[2025-10-05 08:47:04] 2025-10-05 06:47:00,349 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-05 08:47:04] 2025-10-05 06:47:00,349 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-05 08:47:04] 2025-10-05 06:47:00,349 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-05 08:47:04] 2025-10-05 06:47:00,350 | INFO     | [monitor] control thread has ended
[2025-10-05 08:47:04] 2025-10-05 06:47:00,609 [wrapper] ==== pilot stdout END ====
[2025-10-05 08:47:04] 2025-10-05 06:47:00,637 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-05 08:47:04] 2025-10-05 06:47:00,697 [wrapper] pilotpid: 3388
[2025-10-05 08:47:04] 2025-10-05 06:47:00,742 [wrapper] Pilot exit status: 0
[2025-10-05 08:47:04] 2025-10-05 06:47:01,166 [wrapper] pandaids: 6827820805
[2025-10-05 08:47:04] 2025-10-05 06:47:01,907 [wrapper] cleanup supervisor_pilot  1392 3389
[2025-10-05 08:47:04] 2025-10-05 06:47:02,008 [wrapper] Test setup, not cleaning
[2025-10-05 08:47:04] 2025-10-05 06:47:02,108 [wrapper] apfmon messages muted
[2025-10-05 08:47:04] 2025-10-05 06:47:02,203 [wrapper] ==== wrapper stdout END ====
[2025-10-05 08:47:04] 2025-10-05 06:47:02,298 [wrapper] ==== wrapper stderr END ====
[2025-10-05 08:47:04]  *** Error codes and diagnostics ***
[2025-10-05 08:47:04]     "exeErrorCode": 0,
[2025-10-05 08:47:04]     "exeErrorDiag": "",
[2025-10-05 08:47:04]     "pilotErrorCode": 0,
[2025-10-05 08:47:04]     "pilotErrorDiag": "",
[2025-10-05 08:47:05]  *** Listing of results directory ***
[2025-10-05 08:47:05] total 380156
[2025-10-05 08:47:05] -rw-r--r--. 1 boinc boinc    552446 Oct  3 05:15 pilot3.tar.gz
[2025-10-05 08:47:05] -rwx------. 1 boinc boinc     36292 Oct  3 05:21 runpilot2-wrapper.sh
[2025-10-05 08:47:05] -rw-r--r--. 1 boinc boinc      5112 Oct  3 05:21 queuedata.json
[2025-10-05 08:47:05] -rw-r--r--. 1 boinc boinc       100 Oct  5 05:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-05 08:47:05] -rwxr-xr-x. 1 boinc boinc      7986 Oct  5 05:05 run_atlas
[2025-10-05 08:47:05] -rw-r--r--. 1 boinc boinc       105 Oct  5 05:05 job.xml
[2025-10-05 08:47:05] -rw-r--r--. 2 boinc boinc 211199736 Oct  5 05:05 EVNT.46376901._001197.pool.root.1
[2025-10-05 08:47:05] -rw-r--r--. 1 boinc boinc      6368 Oct  5 05:05 init_data.xml
[2025-10-05 08:47:05] -rw-r--r--. 2 boinc boinc     15120 Oct  5 05:05 start_atlas.sh
[2025-10-05 08:47:05] drwxrwx--x. 2 boinc boinc        68 Oct  5 05:05 shared
[2025-10-05 08:47:05] -rw-r--r--. 2 boinc boinc    565603 Oct  5 05:05 input.tar.gz
[2025-10-05 08:47:05] -rw-r--r--. 1 boinc boinc         0 Oct  5 05:05 boinc_lockfile
[2025-10-05 08:47:05] -rw-r--r--. 1 boinc boinc      2519 Oct  5 05:05 pandaJob.out
[2025-10-05 08:47:05] -rw-------. 1 boinc boinc    973982 Oct  5 05:09 agis_schedconf.cvmfs.json
[2025-10-05 08:47:05] drwx------. 4 boinc boinc      4096 Oct  5 05:09 pilot3
[2025-10-05 08:47:05] -rw-------. 1 boinc boinc 169868032 Oct  5 08:43 HITS.46376905._035770.pool.root.1
[2025-10-05 08:47:05] -rw-r--r--. 1 boinc boinc       530 Oct  5 08:44 boinc_task_state.xml
[2025-10-05 08:47:05] -rw-------. 1 boinc boinc      1013 Oct  5 08:44 memory_monitor_summary.json
[2025-10-05 08:47:05] -rw-------. 1 boinc boinc   1560401 Oct  5 08:44 agis_ddmendpoints.agis.ALL.json
[2025-10-05 08:47:05] -rw-------. 1 boinc boinc    444097 Oct  5 08:44 log.46376905._035770.job.log.tgz.1
[2025-10-05 08:47:05] -rw-------. 1 boinc boinc        95 Oct  5 08:46 pilot_heartbeat.json
[2025-10-05 08:47:05] -rw-------. 1 boinc boinc      7787 Oct  5 08:46 heartbeat.json
[2025-10-05 08:47:05] -rw-r--r--. 1 boinc boinc      8192 Oct  5 08:46 boinc_mmap_file
[2025-10-05 08:47:05] -rw-r--r--. 1 boinc boinc        28 Oct  5 08:46 wrapper_checkpoint.txt
[2025-10-05 08:47:05] -rw-------. 1 boinc boinc       819 Oct  5 08:47 pilotlog.txt
[2025-10-05 08:47:05] -rw-------. 1 boinc boinc   1730959 Oct  5 08:47 log.46376905._035770.job.log.1
[2025-10-05 08:47:05] -rw-------. 1 boinc boinc       357 Oct  5 08:47 output.list
[2025-10-05 08:47:05] -rw-r--r--. 1 boinc boinc       620 Oct  5 08:47 runtime_log
[2025-10-05 08:47:05] -rw-------. 1 boinc boinc   2191360 Oct  5 08:47 result.tar.gz
[2025-10-05 08:47:05] -rw-r--r--. 1 boinc boinc      8703 Oct  5 08:47 runtime_log.err
[2025-10-05 08:47:05] -rw-------. 1 boinc boinc       657 Oct  5 08:47 dU2KDmTXlO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqbGNDmyxRwpn.diag
[2025-10-05 08:47:05] -rw-r--r--. 1 boinc boinc     20763 Oct  5 08:47 stderr.txt
[2025-10-05 08:47:05] HITS file was successfully produced:
[2025-10-05 08:47:05] -rw-------. 1 boinc boinc 169868032 Oct  5 08:43 shared/HITS.pool.root.1
[2025-10-05 08:47:05]  *** Contents of shared directory: ***
[2025-10-05 08:47:05] total 374852
[2025-10-05 08:47:05] -rw-r--r--. 2 boinc boinc 211199736 Oct  5 05:05 ATLAS.root_0
[2025-10-05 08:47:05] -rw-r--r--. 2 boinc boinc     15120 Oct  5 05:05 start_atlas.sh
[2025-10-05 08:47:05] -rw-r--r--. 2 boinc boinc    565603 Oct  5 05:05 input.tar.gz
[2025-10-05 08:47:05] -rw-------. 1 boinc boinc 169868032 Oct  5 08:43 HITS.pool.root.1
[2025-10-05 08:47:05] -rw-------. 1 boinc boinc   2191360 Oct  5 08:47 result.tar.gz
08:47:06 (31980): run_atlas exited; CPU time 47442.643751
08:47:06 (31980): called boinc_finish(0)

</stderr_txt>
]]>

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