Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-05 08:12:06 (1497688): vboxwrapper version 26210
2025-10-05 08:12:06 (1497688): BOINC client version: 8.2.4
2025-10-05 08:12:06 (1497688): Detected: VirtualBox VboxManage Interface (Version: 7.0.24)
2025-10-05 08:12:06 (1497688): Successfully copied 'init_data.xml' to the shared directory.
2025-10-05 08:12:06 (1497688): Create VM. (boinc_5e1c3ded9e745011, slot#0)
2025-10-05 08:12:07 (1497688): Setting Memory Size for VM. (4600MB)
2025-10-05 08:12:07 (1497688): Setting CPU Count for VM. (6)
2025-10-05 08:12:07 (1497688): Setting Chipset Options for VM.
2025-10-05 08:12:07 (1497688): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-05 08:12:07 (1497688): Setting Boot Options for VM.
2025-10-05 08:12:08 (1497688): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-05 08:12:08 (1497688): Enabling VM Network Access.
2025-10-05 08:12:08 (1497688): Disabling USB Support for VM.
2025-10-05 08:12:08 (1497688): Disabling COM Port Support for VM.
2025-10-05 08:12:08 (1497688): Disabling LPT Port Support for VM.
2025-10-05 08:12:09 (1497688): Disabling Audio Support for VM.
2025-10-05 08:12:09 (1497688): Disabling Clipboard Support for VM.
2025-10-05 08:12:09 (1497688): Disabling Drag and Drop Support for VM.
2025-10-05 08:12:09 (1497688): Adding storage controller(s) to VM.
2025-10-05 08:12:09 (1497688): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-05 08:12:11 (1497688): Adding VirtualBox Guest Additions to VM.
2025-10-05 08:12:11 (1497688): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-05 08:12:11 (1497688): forwarding host port 52467 to guest port 80
2025-10-05 08:12:11 (1497688): Enabling remote desktop for VM.
2025-10-05 08:12:12 (1497688): Enabling shared directory for VM.
2025-10-05 08:12:12 (1497688): Starting VM using VBoxManage interface. (boinc_5e1c3ded9e745011, slot#0)
2025-10-05 08:12:14 (1497688): Successfully started VM. (PID = '1498397')
2025-10-05 08:12:14 (1497688): Reporting VM Process ID to BOINC.
2025-10-05 08:12:14 (1497688): Guest Log: BIOS: VirtualBox 7.0.24
2025-10-05 08:12:14 (1497688): Guest Log: CPUID EDX: 0x178bfbff
2025-10-05 08:12:14 (1497688): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-05 08:12:14 (1497688): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-05 08:12:14 (1497688): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-05 08:12:14 (1497688): Detected: Web Application Enabled (http://localhost:52467)
2025-10-05 08:12:14 (1497688): Detected: Remote Desktop Enabled (localhost:37071)
2025-10-05 08:12:14 (1497688): Preference change detected
2025-10-05 08:12:14 (1497688): Setting CPU throttle for VM. (50%)
2025-10-05 08:12:14 (1497688): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-05 08:12:15 (1497688): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-05 08:12:15 (1497688): Guest Log: BIOS: Booting from Hard Disk...
2025-10-05 08:12:20 (1497688): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-05 08:12:20 (1497688): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-05 08:12:20 (1497688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-05 08:12:39 (1497688): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-05 08:12:39 (1497688): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-05 08:13:21 (1497688): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-05 08:13:21 (1497688): Guest Log: 00:00:00.000575 main     Log opened 2025-10-05T13:13:19.113616000Z
2025-10-05 08:13:21 (1497688): Guest Log: 00:00:00.000881 main     OS Product: Linux
2025-10-05 08:13:21 (1497688): Guest Log: 00:00:00.000970 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-05 08:13:21 (1497688): Guest Log: 00:00:00.001036 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-05 08:13:21 (1497688): Guest Log: 00:00:00.001102 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-05 08:13:21 (1497688): Guest Log: 00:00:00.001104 main     Process ID: 1361
2025-10-05 08:13:21 (1497688): Guest Log: 00:00:00.001106 main     Package type: LINUX_64BITS_GENERIC
2025-10-05 08:13:21 (1497688): Guest Log: 00:00:00.004579 main     5.2.32 r132073 started. Verbose level = 0
2025-10-05 08:13:21 (1497688): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-05 08:13:21 (1497688): Guest Log: [INFO] Mounting shared directory
2025-10-05 08:13:22 (1497688): Guest Log: [INFO] Checking for init_data.xml
2025-10-05 08:13:29 (1497688): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-05 08:13:29 (1497688): Guest Log: [INFO] Detected branch: prod
2025-10-05 08:13:29 (1497688): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-05 08:13:29 (1497688): Guest Log: Copying input files
2025-10-05 08:13:36 (1497688): Guest Log: Copied input files into RunAtlas.
2025-10-05 08:13:36 (1497688): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-05 08:13:36 (1497688): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-05 08:13:36 (1497688): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-05 08:13:36 (1497688): Guest Log: Further information can be found at the LHC@home message board.
2025-10-05 08:14:37 (1497688): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-05 08:14:38 (1497688): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-05 08:14:38 (1497688): Guest Log: 2.6.3.0 1640 1 30328 151364 4 1 3120538 4096000 0 65024 0 0 n/a 1291 857 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-05 08:14:40 (1497688): Guest Log: copied the webapp to /var/www
2025-10-05 08:14:41 (1497688): Guest Log: ATHENA_PROC_NUMBER=6
2025-10-05 08:14:41 (1497688): Guest Log: ATHENA_CORE_NUMBER=6
2025-10-05 08:14:41 (1497688): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-05 08:14:41 (1497688): Guest Log:  *** Starting ATLAS job. (PandaID=6827819663 taskID=46376905) ***
2025-10-05 09:51:14 (1497688): Status Report: Elapsed Time: '6000.000000'
2025-10-05 09:51:14 (1497688): Status Report: CPU Time: '10523.820000'
2025-10-05 10:03:36 (1497688): VM state change detected. (old = 'running', new = 'paused')
2025-10-05 14:16:49 (1497688): VM state change detected. (old = 'paused', new = 'running')
2025-10-05 14:16:54 (1497688): Guest Log: 01:50:21.049608 timesync vgsvcTimeSyncWorker: Radical host time change: 15 203 009 000 000ns (HostNow=1 759 691 812 982 000 000 ns HostLast=1 759 676 609 973 000 000 ns)
2025-10-05 14:16:55 (1497688): VM state change detected. (old = 'running', new = 'paused')
2025-10-05 14:17:15 (1497688): VM state change detected. (old = 'paused', new = 'running')
2025-10-05 14:17:24 (1497688): Guest Log: 01:50:31.053974 timesync vgsvcTimeSyncWorker: Radical guest time change: 15 203 199 503 000ns (GuestNow=1 759 691 823 172 443 000 ns GuestLast=1 759 676 619 972 940 000 ns fSetTimeLastLoop=true )
2025-10-05 15:43:51 (1497688): Status Report: Elapsed Time: '12000.000000'
2025-10-05 15:43:51 (1497688): Status Report: CPU Time: '27827.120000'
2025-10-05 17:22:52 (1497688): Status Report: Elapsed Time: '18000.000000'
2025-10-05 17:22:52 (1497688): Status Report: CPU Time: '45139.330000'
2025-10-05 18:27:01 (1497688): VM state change detected. (old = 'running', new = 'paused')
2025-10-07 13:30:31 (1497688): VM state change detected. (old = 'paused', new = 'running')
2025-10-07 13:30:36 (1497688): VM state change detected. (old = 'running', new = 'paused')
2025-10-07 13:30:56 (1497688): VM state change detected. (old = 'paused', new = 'running')
2025-10-07 13:31:01 (1497688): Guest Log: 06:00:25.242210 timesync vgsvcTimeSyncWorker: Radical host time change: 155 039 739 000 000ns (HostNow=1 759 861 860 480 000 000 ns HostLast=1 759 706 820 741 000 000 ns)
2025-10-07 13:31:11 (1497688): Guest Log: 06:00:35.242786 timesync vgsvcTimeSyncWorker: Radical guest time change: 155 053 118 365 000ns (GuestNow=1 759 861 870 480 948 000 ns GuestLast=1 759 706 817 362 583 000 ns fSetTimeLastLoop=true )
2025-10-07 13:31:35 (1497688): Guest Log:  *** Job finished ***
2025-10-07 13:31:35 (1497688): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:25,256 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 139683608622912)>', '<ExcThread(queue_monitor, started 139682637657856)>']
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:25,257 | INFO     | [job] queue monitor thread has finished
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:27,216 | INFO     | caller=run is remaining thread - safe to abort (names=['<_MainThread(MainThread, started 139683608622912)>'])
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:32,226 | INFO     | all workflow threads have been joined
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:32,227 | INFO     | end of generic workflow (traces error code: 1213)
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:32,228 | INFO     | traces error code: 1213
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:32,229 | INFO     | an exit code was already set: 1213 (will be converted to a standard shell code)
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:32,229 | INFO     | pilot has finished (exit code=1213, shell exit code=81)
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:32,805 [wrapper] ==== pilot stdout END ====
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:32,836 [wrapper] ==== wrapper stdout RESUME ====
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:32,863 [wrapper] pilotpid: 6067
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:32,890 [wrapper] Pilot exit status: 81
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:33,046 [wrapper] pandaids: 6827819663
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:33,074 [wrapper] WARNING: pilot exitcode non-zero: 81
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:33,102 [wrapper] WARNING: pilot exitcode non-zero: 81
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:33,317 [wrapper] cleanup supervisor_pilot 19829 6068
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:33,343 [wrapper] Test setup, not cleaning
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:33,368 [wrapper] apfmon messages muted
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:33,393 [wrapper] ==== wrapper stdout END ====
2025-10-07 13:31:35 (1497688): Guest Log: 2025-10-07 18:31:33,419 [wrapper] ==== wrapper stderr END ====
2025-10-07 13:31:35 (1497688): Guest Log:  *** Error codes and diagnostics ***
2025-10-07 13:31:35 (1497688): Guest Log:     "exeErrorCode": 0,
2025-10-07 13:31:35 (1497688): Guest Log:     "exeErrorDiag": "",
2025-10-07 13:31:35 (1497688): Guest Log:     "pilotErrorCode": 1213,
2025-10-07 13:31:35 (1497688): Guest Log:     "pilotErrorDiag": "the max batch system time limit has been reached",
2025-10-07 13:31:35 (1497688): Guest Log:  *** Listing of results directory ***
2025-10-07 13:31:35 (1497688): Guest Log: total 10364
2025-10-07 13:31:35 (1497688): Guest Log: -rw-r--r--. 1 atlas atlas  552446 Oct  3 02:45 pilot3.tar.gz
2025-10-07 13:31:35 (1497688): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Oct  3 03:00 queuedata.json
2025-10-07 13:31:35 (1497688): Guest Log: -rwx------. 1 atlas atlas   36292 Oct  3 03:00 runpilot2-wrapper.sh
2025-10-07 13:31:35 (1497688): Guest Log: -rw-r--r--. 1 atlas atlas  565597 Oct  5 13:13 input.tar.gz
2025-10-07 13:31:35 (1497688): Guest Log: -rw-r--r--. 1 atlas atlas   15120 Oct  5 13:13 start_atlas.sh
2025-10-07 13:31:35 (1497688): Guest Log: -rw-r--r--. 1 atlas atlas    5962 Oct  5 13:13 init_data.xml
2025-10-07 13:31:35 (1497688): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Oct  5 13:13 EVNT.46376901._001183.pool.root.1 -> /data/./ATLAS.root_0
2025-10-07 13:31:35 (1497688): Guest Log: -rw-r--r--. 1 atlas atlas    2518 Oct  5 13:14 pandaJob.out
2025-10-07 13:31:35 (1497688): Guest Log: -rw-------. 1 atlas atlas  973982 Oct  5 13:16 agis_schedconf.cvmfs.json
2025-10-07 13:31:35 (1497688): Guest Log: -rw-------. 1 atlas atlas 1560401 Oct  5 13:16 agis_ddmendpoints.agis.ALL.json
2025-10-07 13:31:35 (1497688): Guest Log: drwx------. 4 atlas atlas    4096 Oct  5 13:16 pilot3
2025-10-07 13:31:35 (1497688): Guest Log: -rw-------. 1 atlas atlas      98 Oct  5 23:26 pilot_heartbeat.json
2025-10-07 13:31:35 (1497688): Guest Log: drwxrwx---. 2 atlas atlas    4096 Oct  7 18:31 PanDA_Pilot-6827819663
2025-10-07 13:31:35 (1497688): Guest Log: -rw-------. 1 atlas atlas    1022 Oct  7 18:31 memory_monitor_summary.json
2025-10-07 13:31:35 (1497688): Guest Log: -rw-------. 1 atlas atlas    2439 Oct  7 18:31 heartbeat.json
2025-10-07 13:31:35 (1497688): Guest Log: -rw-------. 1 atlas atlas 2265551 Oct  7 18:31 pilotlog.txt
2025-10-07 13:31:35 (1497688): Guest Log: -rw-------. 1 atlas atlas 2278827 Oct  7 18:31 log.46376905._035409.job.log.1
2025-10-07 13:31:35 (1497688): Guest Log: -rw-r--r--. 1 atlas atlas     571 Oct  7 18:31 runtime_log
2025-10-07 13:31:35 (1497688): Guest Log: -rw-------. 1 atlas atlas 2293760 Oct  7 18:31 result.tar.gz
2025-10-07 13:31:35 (1497688): Guest Log: -rw-r--r--. 1 atlas atlas    7963 Oct  7 18:31 runtime_log.err
2025-10-07 13:31:35 (1497688): Guest Log: -rw-------. 1 atlas atlas     652 Oct  7 18:31 99lLDmZDlO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXXGNDmmgs4Sm.diag
2025-10-07 13:31:35 (1497688): Guest Log: Looking for outputfile HITS.46376905._035409.pool.root.1
2025-10-07 13:31:35 (1497688): Guest Log: No HITS file was produced
2025-10-07 13:31:35 (1497688): Guest Log: Successfully finished the ATLAS job!
2025-10-07 13:31:35 (1497688): Guest Log: Copying the results back to the shared directory!
2025-10-07 13:31:36 (1497688): Guest Log:  *** Contents of shared directory: ***
2025-10-07 13:31:36 (1497688): Guest Log: total 211684
2025-10-07 13:31:36 (1497688): Guest Log: -rw-r--r--. 1 root root 213868621 Oct  5 13:12 ATLAS.root_0
2025-10-07 13:31:36 (1497688): Guest Log: -rw-r--r--. 1 root root      5962 Oct  5 13:12 init_data.xml
2025-10-07 13:31:36 (1497688): Guest Log: -rw-r--r--. 1 root root    565597 Oct  5 13:12 input.tar.gz
2025-10-07 13:31:36 (1497688): Guest Log: -rw-r--r--. 1 root root   2293760 Oct  7 18:31 result.tar.gz
2025-10-07 13:31:36 (1497688): Guest Log: -rw-r--r--. 1 root root     15120 Oct  5 13:12 start_atlas.sh
2025-10-07 13:31:36 (1497688): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-07 13:31:36 (1497688): VM Completion File Detected.
2025-10-07 13:31:36 (1497688): Powering off VM.
2025-10-07 13:31:36 (1497688): Successfully stopped VM.
2025-10-07 13:31:36 (1497688): Deregistering VM. (boinc_5e1c3ded9e745011, slot#0)
2025-10-07 13:31:36 (1497688): Removing network bandwidth throttle group from VM.
2025-10-07 13:31:37 (1497688): Removing VM from VirtualBox.
2025-10-07 13:31:42 (1497688): called boinc_finish(0)

</stderr_txt>
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