Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:44:47 (3531795): wrapper (7.7.26015): starting
01:44:47 (3531795): wrapper: running run_atlas (--nthreads 12)
[2025-10-03 01:44:47] Arguments: --nthreads 12
[2025-10-03 01:44:47] Threads: 12
[2025-10-03 01:44:47] Checking for CVMFS
[2025-10-03 01:44:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-03 01:44:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-03 01:44:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-03 01:44:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-03 01:44:48] 2.11.5.0 2096 16736 225716 151285 3 566 27660614 45568001 20872 130560 0 127246392 99.833 67543201 25047 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-10-03 01:44:48] CVMFS is ok
[2025-10-03 01:44:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-03 01:44:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-03 01:44:48] Further information can be found at the LHC@home message board.
[2025-10-03 01:44:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-03 01:44:48] Checking for apptainer binary...
[2025-10-03 01:44:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-03 01:44:48] Running /usr/bin/apptainer --version
[2025-10-03 01:44:48] apptainer version 1.4.1-1.el9
[2025-10-03 01:44:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-03 01:44:49] wns0053.triumf.lcg
[2025-10-03 01:44:49] apptainer works
[2025-10-03 01:44:49] Set ATHENA_PROC_NUMBER=12
[2025-10-03 01:44:49] Set ATHENA_CORE_NUMBER=12
[2025-10-03 01:44:49] Starting ATLAS job with PandaID=6827991217
[2025-10-03 01:44:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-03 01:49:25]  *** The last 200 lines of the pilot log: ***
[2025-10-03 01:49:25] 2025-10-03 08:48:49,886 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-03 01:49:25] 2025-10-03 08:48:49,932 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-03 01:49:25] 2025-10-03 08:48:49,932 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | WARNING  | wrong length of table data, x=[1759481173.0], y=[1776.0] (must be same and length>=4)
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | could have reported an average CPU frequency of 2793 MHz (4 samples)
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | ..............................
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | . Timing measurements:
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | . get job = 0 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | . initial setup = 4 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | . payload setup = 18 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | . stage-in = 0 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,934 | INFO     | . payload execution = 39 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,934 | INFO     | . stage-out = 1 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,934 | INFO     | . log creation = 0 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,934 | INFO     | ..............................
[2025-10-03 01:49:25] 2025-10-03 08:48:49,934 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-03 01:49:25] 2025-10-03 08:48:49,934 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6827991217/pilotlog.txt
[2025-10-03 01:49:25] 2025-10-03 08:48:50,010 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-03 01:49:25] - Log from pilotlog.txt -
[2025-10-03 01:49:25] 2025-10-03 08:48:49,885 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6827991217/memory_monitor_summary.json (trf name=prmon)
[2025-10-03 01:49:25] 2025-10-03 08:48:49,886 | INFO     | extracted standard info from prmon json
[2025-10-03 01:49:25] 2025-10-03 08:48:49,886 | INFO     | extracted standard memory fields from prmon json
[2025-10-03 01:49:25] 2025-10-03 08:48:49,886 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-03 01:49:25] 2025-10-03 08:48:49,932 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-03 01:49:25] 2025-10-03 08:48:49,932 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | WARNING  | wrong length of table data, x=[1759481173.0], y=[1776.0] (must be same and length>=4)
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | could have reported an average CPU frequency of 2793 MHz (4 samples)
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | ..............................
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | . Timing measurements:
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | . get job = 0 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | . initial setup = 4 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | . payload setup = 18 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | . stage-in = 0 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,934 | INFO     | . payload execution = 39 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,934 | INFO     | . stage-out = 1 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,934 | INFO     | . log creation = 0 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,934 | INFO     | ..............................
[2025-10-03 01:49:25] 2025-10-03 08:48:49,934 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-03 01:49:25] 2025-10-03 08:48:49,934 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6827991217/pilotlog.txt
[2025-10-03 01:49:25] 2025-10-03 08:48:50,011 | WARNING  | 
[2025-10-03 01:49:25] [begin log extracts]
[2025-10-03 01:49:25] - Log from pilotlog.txt -
[2025-10-03 01:49:25] 2025-10-03 08:48:49,885 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6827991217/memory_monitor_summary.json (trf name=prmon)
[2025-10-03 01:49:25] 2025-10-03 08:48:49,886 | INFO     | extracted standard info from prmon json
[2025-10-03 01:49:25] 2025-10-03 08:48:49,886 | INFO     | extracted standard memory fields from prmon json
[2025-10-03 01:49:25] 2025-10-03 08:48:49,886 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-03 01:49:25] 2025-10-03 08:48:49,932 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-03 01:49:25] 2025-10-03 08:48:49,932 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | WARNING  | wrong length of table data, x=[1759481173.0], y=[1776.0] (must be same and length>=4)
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | could have reported an average CPU frequency of 2793 MHz (4 samples)
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | ..............................
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | . Timing measurements:
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | . get job = 0 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | . initial setup = 4 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | . payload setup = 18 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,933 | INFO     | . stage-in = 0 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,934 | INFO     | . payload execution = 39 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,934 | INFO     | . stage-out = 1 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,934 | INFO     | . log creation = 0 s
[2025-10-03 01:49:25] 2025-10-03 08:48:49,934 | INFO     | ..............................
[2025-10-03 01:49:25] 2025-10-03 08:48:49,934 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-03 01:49:25] 2025-10-03 08:48:49,934 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6827991217/pilotlog.txt
[2025-10-03 01:49:25] [end log extracts]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,011 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-03 01:49:25] 2025-10-03 08:48:50,015 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-03 01:49:25] 2025-10-03 08:48:50,158 | INFO     | 
[2025-10-03 01:49:25] 2025-10-03 08:48:50,158 | INFO     | job summary report
[2025-10-03 01:49:25] 2025-10-03 08:48:50,158 | INFO     | --------------------------------------------------
[2025-10-03 01:49:25] 2025-10-03 08:48:50,158 | INFO     | PanDA job id: 6827991217
[2025-10-03 01:49:25] 2025-10-03 08:48:50,158 | INFO     | task id: 46376905
[2025-10-03 01:49:25] 2025-10-03 08:48:50,158 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-03 01:46:32,789 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-03 01:49:25] 2025-10-03 08:48:50,158 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-03 01:49:25] 2025-10-03 08:48:50,158 | INFO     | pilot state: failed 
[2025-10-03 01:49:25] 2025-10-03 08:48:50,159 | INFO     | transexitcode: 65
[2025-10-03 01:49:25] 2025-10-03 08:48:50,159 | INFO     | exeerrorcode: 65
[2025-10-03 01:49:25] 2025-10-03 08:48:50,159 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-03 01:49:25] 2025-10-03 08:48:50,159 | INFO     | exitcode: 65
[2025-10-03 01:49:25] 2025-10-03 08:48:50,159 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-03 01:49:25] 2025-10-03 08:48:50,159 | INFO     | cpuconsumptiontime: 17 s
[2025-10-03 01:49:25] 2025-10-03 08:48:50,159 | INFO     | nevents: 0
[2025-10-03 01:49:25] 2025-10-03 08:48:50,159 | INFO     | neventsw: 0
[2025-10-03 01:49:25] 2025-10-03 08:48:50,159 | INFO     | pid: 3542193
[2025-10-03 01:49:25] 2025-10-03 08:48:50,159 | INFO     | pgrp: 3542193
[2025-10-03 01:49:25] 2025-10-03 08:48:50,159 | INFO     | corecount: 12
[2025-10-03 01:49:25] 2025-10-03 08:48:50,159 | INFO     | event service: False
[2025-10-03 01:49:25] 2025-10-03 08:48:50,159 | INFO     | sizes: {0: 2348642, 1: 2348841, 10: 2349103, 12: 2349131, 61: 2372468, 62: 2372444, 63: 2376920, 190: 2377058}
[2025-10-03 01:49:25] 2025-10-03 08:48:50,159 | INFO     | --------------------------------------------------
[2025-10-03 01:49:25] 2025-10-03 08:48:50,159 | INFO     | 
[2025-10-03 01:49:25] 2025-10-03 08:48:50,159 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-03 01:49:25] 2025-10-03 08:48:50,178 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,184 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,184 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,184 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,184 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,184 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,184 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,184 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,185 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,185 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,185 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,185 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,185 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,185 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,185 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,185 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,185 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,185 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-03 01:49:25] 2025-10-03 08:48:50,185 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,185 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-03 01:49:25] 2025-10-03 08:48:50,185 | INFO     | job 6827991217 has completed (purged errors)
[2025-10-03 01:49:25] 2025-10-03 08:48:50,185 | INFO     | overall cleanup function is called
[2025-10-03 01:49:25] 2025-10-03 08:48:51,192 | INFO     | --- collectZombieJob: --- 10, [3542193]
[2025-10-03 01:49:25] 2025-10-03 08:48:51,192 | INFO     | zombie collector waiting for pid 3542193
[2025-10-03 01:49:25] 2025-10-03 08:48:51,192 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-03 01:49:25] 2025-10-03 08:48:51,192 | INFO     | collected zombie processes
[2025-10-03 01:49:25] 2025-10-03 08:48:51,192 | INFO     | will attempt to kill all subprocesses of pid=3542193
[2025-10-03 01:49:25] 2025-10-03 08:48:51,455 | INFO     | process IDs to be killed: [3542193] (in reverse order)
[2025-10-03 01:49:25] 2025-10-03 08:48:51,559 | WARNING  | found no corresponding commands to process id(s)
[2025-10-03 01:49:25] 2025-10-03 08:48:51,560 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-03 01:49:25] 2025-10-03 08:48:51,589 | INFO     | did not find any defunct processes belonging to 3542193
[2025-10-03 01:49:25] 2025-10-03 08:48:51,644 | INFO     | did not find any defunct processes belonging to 3542193
[2025-10-03 01:49:25] 2025-10-03 08:48:51,645 | INFO     | ready for new job
[2025-10-03 01:49:25] 2025-10-03 08:48:51,645 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-03 01:49:25] 2025-10-03 08:48:51,647 | INFO     | ***************************************
[2025-10-03 01:49:25] 2025-10-03 08:48:51,647 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-03 01:49:25] 2025-10-03 08:48:51,647 | INFO     | ***************************************
[2025-10-03 01:49:25] 2025-10-03 08:48:51,647 | INFO     | 
[2025-10-03 01:49:25] 2025-10-03 08:48:51,649 | INFO     | architecture information:
[2025-10-03 01:49:25] 2025-10-03 08:48:51,649 | INFO     | executing command: cat /etc/os-release
[2025-10-03 01:49:25] 2025-10-03 08:48:51,663 | INFO     | cat /etc/os-release:
[2025-10-03 01:49:25] NAME="CentOS Linux"
[2025-10-03 01:49:25] VERSION="7 (Core)"
[2025-10-03 01:49:25] ID="centos"
[2025-10-03 01:49:25] ID_LIKE="rhel fedora"
[2025-10-03 01:49:25] VERSION_ID="7"
[2025-10-03 01:49:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-03 01:49:25] ANSI_COLOR="0;31"
[2025-10-03 01:49:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-03 01:49:25] HOME_URL="https://www.centos.org/"
[2025-10-03 01:49:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-03 01:49:25] 
[2025-10-03 01:49:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-03 01:49:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-03 01:49:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-03 01:49:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-03 01:49:25] 
[2025-10-03 01:49:25] 2025-10-03 08:48:51,663 | INFO     | ***************************************
[2025-10-03 01:49:25] 2025-10-03 08:48:52,167 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-03 01:49:25] 2025-10-03 08:48:52,266 | INFO     | sufficient remaining disk space (2018870558720 B)
[2025-10-03 01:49:25] 2025-10-03 08:48:52,267 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-03 01:49:25] 2025-10-03 08:48:52,267 | INFO     | current server update state: UPDATING_FINAL
[2025-10-03 01:49:25] 2025-10-03 08:48:52,267 | INFO     | update_server=False
[2025-10-03 01:49:25] 2025-10-03 08:48:52,267 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-03 01:49:25] 2025-10-03 08:48:52,269 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-03 01:49:25] 2025-10-03 08:48:52,281 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-03 01:49:25] 2025-10-03 08:48:52,754 | INFO     | all data control threads have been joined
[2025-10-03 01:49:25] 2025-10-03 08:48:52,805 | INFO     | all payload control threads have been joined
[2025-10-03 01:49:25] 2025-10-03 08:48:52,905 | INFO     | all job control threads have been joined
[2025-10-03 01:49:25] 2025-10-03 08:48:53,187 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-03 01:49:25] 2025-10-03 08:48:53,187 | INFO     | aborting loop
[2025-10-03 01:49:25] 2025-10-03 08:48:53,272 | INFO     | [job] retrieve thread has finished
[2025-10-03 01:49:25] 2025-10-03 08:48:53,339 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-03 01:49:25] 2025-10-03 08:48:53,760 | INFO     | [data] control thread has finished
[2025-10-03 01:49:25] 2025-10-03 08:48:53,811 | INFO     | [payload] control thread has finished
[2025-10-03 01:49:25] 2025-10-03 08:48:53,811 | INFO     | [payload] execute_payloads thread has finished
[2025-10-03 01:49:25] 2025-10-03 08:48:53,817 | INFO     | [job] validate thread has finished
[2025-10-03 01:49:25] 2025-10-03 08:48:53,911 | INFO     | [job] control thread has finished
[2025-10-03 01:49:25] 2025-10-03 08:48:53,972 | INFO     | [data] copytool_in thread has finished
[2025-10-03 01:49:25] 2025-10-03 08:48:54,059 | INFO     | [job] create_data_payload thread has finished
[2025-10-03 01:49:25] 2025-10-03 08:48:54,059 | INFO     | [payload] validate_pre thread has finished
[2025-10-03 01:49:25] 2025-10-03 08:48:54,193 | INFO     | [job] job monitor thread has finished
[2025-10-03 01:49:25] 2025-10-03 08:48:54,293 | INFO     | [data] copytool_out thread has finished
[2025-10-03 01:49:25] 2025-10-03 08:48:54,600 | INFO     | [payload] validate_post thread has finished
[2025-10-03 01:49:25] 2025-10-03 08:48:54,640 | INFO     | [payload] failed_post thread has finished
[2025-10-03 01:49:25] 2025-10-03 08:48:55,175 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-03 01:49:25] 2025-10-03 08:48:56,186 | INFO     | [job] queue monitor thread has finished
[2025-10-03 01:49:25] 2025-10-03 08:48:56,279 | INFO     | [data] queue_monitor thread has finished
[2025-10-03 01:49:25] 2025-10-03 08:49:15,120 | INFO     | [monitor] cgroup control has ended
[2025-10-03 01:49:25] 2025-10-03 08:49:16,207 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140509206124352)>', '<ExcThread(monitor, started 140508814882560)>']
[2025-10-03 01:49:25] 2025-10-03 08:49:21,233 | INFO     | all workflow threads have been joined
[2025-10-03 01:49:25] 2025-10-03 08:49:21,233 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-03 01:49:25] 2025-10-03 08:49:21,233 | INFO     | traces error code: 0
[2025-10-03 01:49:25] 2025-10-03 08:49:21,234 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-03 01:49:25] 2025-10-03 08:49:23,486 | INFO     | PID=3535502 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-03 01:49:25] 2025-10-03 08:49:23,487 | INFO     | .. there are 35 such processes running
[2025-10-03 01:49:25] 2025-10-03 08:49:23,487 | INFO     | found 0 job(s) in 20 queues
[2025-10-03 01:49:25] 2025-10-03 08:49:23,487 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-03 01:49:25] 2025-10-03 08:49:23,487 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-03 01:49:25] 2025-10-03 08:49:23,487 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-03 01:49:25] 2025-10-03 08:49:23,488 | INFO     | [monitor] control thread has ended
[2025-10-03 01:49:25] 2025-10-03 08:49:24,135 [wrapper] ==== pilot stdout END ====
[2025-10-03 01:49:25] 2025-10-03 08:49:24,168 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-03 01:49:25] 2025-10-03 08:49:24,206 [wrapper] pilotpid: 3535502
[2025-10-03 01:49:25] 2025-10-03 08:49:24,262 [wrapper] Pilot exit status: 0
[2025-10-03 01:49:25] 2025-10-03 08:49:24,492 [wrapper] pandaids: 6827991217
[2025-10-03 01:49:25] 2025-10-03 08:49:25,056 [wrapper] cleanup supervisor_pilot 3535512 3535504
[2025-10-03 01:49:25] 2025-10-03 08:49:25,069 [wrapper] Test setup, not cleaning
[2025-10-03 01:49:25] 2025-10-03 08:49:25,076 [wrapper] apfmon messages muted
[2025-10-03 01:49:25] 2025-10-03 08:49:25,111 [wrapper] ==== wrapper stdout END ====
[2025-10-03 01:49:25] 2025-10-03 08:49:25,173 [wrapper] ==== wrapper stderr END ====
[2025-10-03 01:49:25]  *** Error codes and diagnostics ***
[2025-10-03 01:49:25]     "exeErrorCode": 65,
[2025-10-03 01:49:25]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-03 01:49:25]     "pilotErrorCode": 1305,
[2025-10-03 01:49:25]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-03 01:49:25]  *** Listing of results directory ***
[2025-10-03 01:49:25] total 215256
[2025-10-03 01:49:25] -rw-r--r--. 1 boinc boinc    552446 Oct  2 22:35 pilot3.tar.gz
[2025-10-03 01:49:25] -rw-r--r--. 1 boinc boinc      5112 Oct  2 22:57 queuedata.json
[2025-10-03 01:49:25] -rwx------. 1 boinc boinc     36292 Oct  2 22:58 runpilot2-wrapper.sh
[2025-10-03 01:49:25] -rw-r--r--. 1 boinc boinc       100 Oct  3 01:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-03 01:49:25] -rwxr-xr-x. 1 boinc boinc      7986 Oct  3 01:44 run_atlas
[2025-10-03 01:49:25] -rw-r--r--. 1 boinc boinc       105 Oct  3 01:44 job.xml
[2025-10-03 01:49:25] -rw-r--r--. 1 boinc boinc      6593 Oct  3 01:44 init_data.xml
[2025-10-03 01:49:25] -rw-r--r--. 2 boinc boinc 216313048 Oct  3 01:44 EVNT.46376901._001306.pool.root.1
[2025-10-03 01:49:25] -rw-r--r--. 2 boinc boinc     15120 Oct  3 01:44 start_atlas.sh
[2025-10-03 01:49:25] drwxrwx--x. 2 boinc boinc      4096 Oct  3 01:44 shared
[2025-10-03 01:49:25] -rw-r--r--. 2 boinc boinc    565602 Oct  3 01:44 input.tar.gz
[2025-10-03 01:49:25] -rw-r--r--. 1 boinc boinc         0 Oct  3 01:44 boinc_lockfile
[2025-10-03 01:49:25] -rw-r--r--. 1 boinc boinc      2519 Oct  3 01:44 pandaJob.out
[2025-10-03 01:49:25] -rw-------. 1 boinc boinc    975971 Oct  3 01:45 agis_schedconf.cvmfs.json
[2025-10-03 01:49:25] -rw-------. 1 boinc boinc   1560401 Oct  3 01:45 agis_ddmendpoints.agis.ALL.json
[2025-10-03 01:49:25] drwx------. 4 boinc boinc      4096 Oct  3 01:45 pilot3
[2025-10-03 01:49:25] -rw-------. 1 boinc boinc       987 Oct  3 01:46 memory_monitor_summary.json
[2025-10-03 01:49:25] -rw-------. 1 boinc boinc     21631 Oct  3 01:46 log.46376905._038493.job.log.tgz.1
[2025-10-03 01:49:25] -rw-------. 1 boinc boinc      8435 Oct  3 01:48 heartbeat.json
[2025-10-03 01:49:25] -rw-r--r--. 1 boinc boinc      8192 Oct  3 01:49 boinc_mmap_file
[2025-10-03 01:49:25] -rw-------. 1 boinc boinc       823 Oct  3 01:49 pilotlog.txt
[2025-10-03 01:49:25] -rw-------. 1 boinc boinc        95 Oct  3 01:49 pilot_heartbeat.json
[2025-10-03 01:49:25] -rw-r--r--. 1 boinc boinc        22 Oct  3 01:49 wrapper_checkpoint.txt
[2025-10-03 01:49:25] -rw-------. 1 boinc boinc     88556 Oct  3 01:49 log.46376905._038493.job.log.1
[2025-10-03 01:49:25] -rw-r--r--. 1 boinc boinc       524 Oct  3 01:49 boinc_task_state.xml
[2025-10-03 01:49:25] -rw-------. 1 boinc boinc       188 Oct  3 01:49 output.list
[2025-10-03 01:49:25] -rw-r--r--. 1 boinc boinc       620 Oct  3 01:49 runtime_log
[2025-10-03 01:49:25] -rw-------. 1 boinc boinc    133120 Oct  3 01:49 result.tar.gz
[2025-10-03 01:49:25] -rw-------. 1 boinc boinc       644 Oct  3 01:49 zg1KDmOznO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmo4GNDm2wkRAn.diag
[2025-10-03 01:49:25] -rw-r--r--. 1 boinc boinc      8528 Oct  3 01:49 runtime_log.err
[2025-10-03 01:49:25] -rw-r--r--. 1 boinc boinc     21789 Oct  3 01:49 stderr.txt
[2025-10-03 01:49:25] No HITS result produced
[2025-10-03 01:49:25]  *** Contents of shared directory: ***
[2025-10-03 01:49:25] total 211952
[2025-10-03 01:49:25] -rw-r--r--. 2 boinc boinc 216313048 Oct  3 01:44 ATLAS.root_0
[2025-10-03 01:49:25] -rw-r--r--. 2 boinc boinc     15120 Oct  3 01:44 start_atlas.sh
[2025-10-03 01:49:25] -rw-r--r--. 2 boinc boinc    565602 Oct  3 01:44 input.tar.gz
[2025-10-03 01:49:25] -rw-------. 1 boinc boinc    133120 Oct  3 01:49 result.tar.gz
01:49:26 (3531795): run_atlas exited; CPU time 25.503676
01:49:26 (3531795): called boinc_finish(0)

</stderr_txt>
]]>

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