Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:26:36 (5375): wrapper (7.7.26015): starting
03:26:36 (5375): wrapper: running run_atlas (--nthreads 8)
[2025-10-06 03:26:36] Arguments: --nthreads 8
[2025-10-06 03:26:36] Threads: 8
[2025-10-06 03:26:36] Checking for CVMFS
[2025-10-06 03:26:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 03:26:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 03:26:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 03:26:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 03:26:38] 2.11.2.0 28349 148365 135700 151381 1 60 19802355 25165825 4632 130560 0 82830299 99.900 32790562 3525 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-06 03:26:38] CVMFS is ok
[2025-10-06 03:26:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 03:26:38] Checking for apptainer binary...
[2025-10-06 03:26:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 03:26:38] Running /usr/bin/apptainer --version
[2025-10-06 03:26:38] apptainer version 1.3.2-1.el7
[2025-10-06 03:26:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 03:27:20] cg-vwn487.simple-grid.lan
[2025-10-06 03:27:20] apptainer works
[2025-10-06 03:27:20] Set ATHENA_PROC_NUMBER=8
[2025-10-06 03:27:20] Set ATHENA_CORE_NUMBER=8
[2025-10-06 03:27:20] Starting ATLAS job with PandaID=6827428883
[2025-10-06 03:27:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 07:13:34]  *** The last 200 lines of the pilot log: ***
[2025-10-06 07:13:34] 2025-10-06 05:12:46,933 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 07:13:34] 2025-10-06 05:12:46,933 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 07:13:34] 2025-10-06 05:12:46,937 | INFO     | fitting pss+swap vs Time
[2025-10-06 07:13:34] 2025-10-06 05:12:46,938 | INFO     | sum of square deviations: 2871616632.5
[2025-10-06 07:13:34] 2025-10-06 05:12:46,939 | INFO     | sum of deviations: 85473038685.50003
[2025-10-06 07:13:34] 2025-10-06 05:12:46,940 | INFO     | mean x: 1759721051.5
[2025-10-06 07:13:34] 2025-10-06 05:12:46,940 | INFO     | mean y: 2404181.080952381
[2025-10-06 07:13:34] 2025-10-06 05:12:46,940 | INFO     | -- intersect: -52375306620.65793
[2025-10-06 07:13:34] 2025-10-06 05:12:46,940 | INFO     | intersect: -52375306620.65793
[2025-10-06 07:13:34] 2025-10-06 05:12:46,940 | INFO     | chi2: 7.652999427537462
[2025-10-06 07:13:34] 2025-10-06 05:12:46,941 | INFO     | sum of square deviations: 2671343110.0
[2025-10-06 07:13:34] 2025-10-06 05:12:46,948 | INFO     | sum of deviations: 97777950359.0
[2025-10-06 07:13:34] 2025-10-06 05:12:46,949 | INFO     | mean x: 1759720899.0
[2025-10-06 07:13:34] 2025-10-06 05:12:46,949 | INFO     | mean y: 2413334.5902439025
[2025-10-06 07:13:34] 2025-10-06 05:12:46,949 | INFO     | -- intersect: -64407846082.85946
[2025-10-06 07:13:34] 2025-10-06 05:12:46,949 | INFO     | intersect: -64407846082.85946
[2025-10-06 07:13:34] 2025-10-06 05:12:46,950 | INFO     | chi2: 6.8670173789063504
[2025-10-06 07:13:34] 2025-10-06 05:12:46,950 | INFO     | current chi2=6.8670173789063504 (change=10.27024836566622 %)
[2025-10-06 07:13:34] 2025-10-06 05:12:46,950 | INFO     | right removable region: 204
[2025-10-06 07:13:34] 2025-10-06 05:12:46,950 | INFO     | sum of square deviations: 2671343110.0
[2025-10-06 07:13:34] 2025-10-06 05:12:46,952 | INFO     | sum of deviations: 14504204239.999996
[2025-10-06 07:13:34] 2025-10-06 05:12:46,952 | INFO     | mean x: 1759721204.0
[2025-10-06 07:13:34] 2025-10-06 05:12:46,952 | INFO     | mean y: 2458175.4487804878
[2025-10-06 07:13:34] 2025-10-06 05:12:46,952 | INFO     | -- intersect: -9552044820.714336
[2025-10-06 07:13:34] 2025-10-06 05:12:46,952 | INFO     | intersect: -9552044820.714336
[2025-10-06 07:13:34] 2025-10-06 05:12:46,953 | INFO     | chi2: 2.8066773614668974
[2025-10-06 07:13:34] 2025-10-06 05:12:46,953 | INFO     | current chi2=2.8066773614668974 (change=63.325786339827104 %)
[2025-10-06 07:13:34] 2025-10-06 05:12:46,953 | INFO     | sum of square deviations: 2480604650.0
[2025-10-06 07:13:34] 2025-10-06 05:12:46,955 | INFO     | sum of deviations: -26958478409.0
[2025-10-06 07:13:34] 2025-10-06 05:12:46,955 | INFO     | mean x: 1759721356.5
[2025-10-06 07:13:34] 2025-10-06 05:12:46,955 | INFO     | mean y: 2491149.86
[2025-10-06 07:13:34] 2025-10-06 05:12:46,955 | INFO     | -- intersect: 19126622919.532143
[2025-10-06 07:13:34] 2025-10-06 05:12:46,955 | INFO     | intersect: 19126622919.532143
[2025-10-06 07:13:34] 2025-10-06 05:12:46,956 | INFO     | chi2: 1.0360157838908242
[2025-10-06 07:13:34] 2025-10-06 05:12:46,956 | INFO     | current chi2=1.0360157838908242 (change=63.08746426951778 %)
[2025-10-06 07:13:34] 2025-10-06 05:12:46,956 | INFO     | sum of square deviations: 2299168690.0
[2025-10-06 07:13:34] 2025-10-06 05:12:46,958 | INFO     | sum of deviations: -25479319238.0
[2025-10-06 07:13:34] 2025-10-06 05:12:46,958 | INFO     | mean x: 1759721509.0
[2025-10-06 07:13:34] 2025-10-06 05:12:46,958 | INFO     | mean y: 2489842.1897435896
[2025-10-06 07:13:34] 2025-10-06 05:12:46,958 | INFO     | -- intersect: 19503671418.295013
[2025-10-06 07:13:34] 2025-10-06 05:12:46,958 | INFO     | intersect: 19503671418.295013
[2025-10-06 07:13:34] 2025-10-06 05:12:46,975 | INFO     | chi2: 1.0072015044722873
[2025-10-06 07:13:34] 2025-10-06 05:12:46,975 | INFO     | current chi2=1.0072015044722873 (change=2.7812587285420483 %)
[2025-10-06 07:13:34] 2025-10-06 05:12:46,975 | INFO     | left removable region: 30
[2025-10-06 07:13:34] 2025-10-06 05:12:46,975 | INFO     | sum of square deviations: 1633472487.5
[2025-10-06 07:13:34] 2025-10-06 05:12:46,977 | INFO     | sum of deviations: 4865311962.500002
[2025-10-06 07:13:34] 2025-10-06 05:12:46,977 | INFO     | mean x: 1759721783.5
[2025-10-06 07:13:34] 2025-10-06 05:12:46,977 | INFO     | mean y: 2485989.6264367816
[2025-10-06 07:13:34] 2025-10-06 05:12:46,977 | INFO     | -- intersect: -5238860595.303043
[2025-10-06 07:13:34] 2025-10-06 05:12:46,977 | INFO     | intersect: -5238860595.303043
[2025-10-06 07:13:34] 2025-10-06 05:12:46,977 | INFO     | chi2: 0.0002910731978123856
[2025-10-06 07:13:34] 2025-10-06 05:12:46,978 | INFO     | -- intersect: -5238860595.303043
[2025-10-06 07:13:34] 2025-10-06 05:12:46,978 | INFO     | current memory leak: 2.98 B/s (using 174 data points, chi2=0.00)
[2025-10-06 07:13:34] 2025-10-06 05:12:46,978 | INFO     | could have reported an average CPU frequency of 2249 MHz (10 samples)
[2025-10-06 07:13:34] 2025-10-06 05:12:46,979 | INFO     | ..............................
[2025-10-06 07:13:34] 2025-10-06 05:12:46,979 | INFO     | . Timing measurements:
[2025-10-06 07:13:34] 2025-10-06 05:12:46,979 | INFO     | . get job = 0 s
[2025-10-06 07:13:34] 2025-10-06 05:12:46,979 | INFO     | . initial setup = 7 s
[2025-10-06 07:13:34] 2025-10-06 05:12:46,979 | INFO     | . payload setup = 107 s
[2025-10-06 07:13:34] 2025-10-06 05:12:46,979 | INFO     | . stage-in = 0 s
[2025-10-06 07:13:34] 2025-10-06 05:12:46,979 | INFO     | . payload execution = 12949 s
[2025-10-06 07:13:34] 2025-10-06 05:12:46,979 | INFO     | . stage-out = 2 s
[2025-10-06 07:13:34] 2025-10-06 05:12:46,979 | INFO     | . log creation = 1 s
[2025-10-06 07:13:34] 2025-10-06 05:12:46,979 | INFO     | ..............................
[2025-10-06 07:13:34] 2025-10-06 05:12:47,156 | INFO     | 
[2025-10-06 07:13:34] 2025-10-06 05:12:47,157 | INFO     | job summary report
[2025-10-06 07:13:34] 2025-10-06 05:12:47,157 | INFO     | --------------------------------------------------
[2025-10-06 07:13:34] 2025-10-06 05:12:47,157 | INFO     | PanDA job id: 6827428883
[2025-10-06 07:13:34] 2025-10-06 05:12:47,157 | INFO     | task id: 46376905
[2025-10-06 07:13:34] 2025-10-06 05:12:47,157 | INFO     | errors: (none)
[2025-10-06 07:13:34] 2025-10-06 05:12:47,157 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 07:13:34] 2025-10-06 05:12:47,157 | INFO     | pilot state: finished 
[2025-10-06 07:13:34] 2025-10-06 05:12:47,157 | INFO     | transexitcode: 0
[2025-10-06 07:13:34] 2025-10-06 05:12:47,157 | INFO     | exeerrorcode: 0
[2025-10-06 07:13:34] 2025-10-06 05:12:47,158 | INFO     | exeerrordiag: 
[2025-10-06 07:13:34] 2025-10-06 05:12:47,158 | INFO     | exitcode: 0
[2025-10-06 07:13:34] 2025-10-06 05:12:47,158 | INFO     | exitmsg: OK
[2025-10-06 07:13:34] 2025-10-06 05:12:47,158 | INFO     | cpuconsumptiontime: 43569 s
[2025-10-06 07:13:34] 2025-10-06 05:12:47,158 | INFO     | nevents: 400
[2025-10-06 07:13:34] 2025-10-06 05:12:47,158 | INFO     | neventsw: 0
[2025-10-06 07:13:34] 2025-10-06 05:12:47,158 | INFO     | pid: 15714
[2025-10-06 07:13:34] 2025-10-06 05:12:47,158 | INFO     | pgrp: 15714
[2025-10-06 07:13:34] 2025-10-06 05:12:47,158 | INFO     | corecount: 8
[2025-10-06 07:13:34] 2025-10-06 05:12:47,158 | INFO     | event service: False
[2025-10-06 07:13:34] 2025-10-06 05:12:47,158 | INFO     | sizes: {0: 2348587, 1: 2348842, 12: 2348842, 23: 2348870, 34: 2348898, 44: 2348926, 55: 2349082, 66: 2349110, 72: 2349400, 77: 2349428, 13061: 2379298, 13064: 2388
[2025-10-06 07:13:34] 2025-10-06 05:12:47,158 | INFO     | --------------------------------------------------
[2025-10-06 07:13:34] 2025-10-06 05:12:47,158 | INFO     | 
[2025-10-06 07:13:34] 2025-10-06 05:12:47,159 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-10-06 07:13:34] 2025-10-06 05:12:47,627 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 07:13:34] 2025-10-06 05:12:47,627 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 07:13:34] 2025-10-06 05:12:47,627 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 07:13:34] 2025-10-06 05:12:47,628 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 07:13:34] 2025-10-06 05:12:47,628 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 07:13:34] 2025-10-06 05:12:47,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 07:13:34] 2025-10-06 05:12:47,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 07:13:34] 2025-10-06 05:12:47,628 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 07:13:34] 2025-10-06 05:12:47,628 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 07:13:34] 2025-10-06 05:12:47,628 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 07:13:34] 2025-10-06 05:12:47,628 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 07:13:34] 2025-10-06 05:12:47,628 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 07:13:34] 2025-10-06 05:12:47,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 07:13:34] 2025-10-06 05:12:47,629 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 07:13:34] 2025-10-06 05:12:47,629 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 07:13:34] 2025-10-06 05:12:47,629 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 07:13:34] 2025-10-06 05:12:47,629 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 07:13:34] 2025-10-06 05:12:47,629 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 07:13:34] 2025-10-06 05:12:47,629 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 07:13:34] 2025-10-06 05:12:47,629 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 07:13:34] 2025-10-06 05:12:47,629 | INFO     | job 6827428883 has completed (purged errors)
[2025-10-06 07:13:34] 2025-10-06 05:12:47,630 | INFO     | overall cleanup function is called
[2025-10-06 07:13:34] 2025-10-06 05:12:48,646 | INFO     | --- collectZombieJob: --- 10, [15714]
[2025-10-06 07:13:34] 2025-10-06 05:12:48,647 | INFO     | zombie collector waiting for pid 15714
[2025-10-06 07:13:34] 2025-10-06 05:12:48,647 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 07:13:34] 2025-10-06 05:12:48,647 | INFO     | collected zombie processes
[2025-10-06 07:13:34] 2025-10-06 05:12:48,647 | INFO     | will attempt to kill all subprocesses of pid=15714
[2025-10-06 07:13:34] 2025-10-06 05:12:48,783 | INFO     | process IDs to be killed: [15714] (in reverse order)
[2025-10-06 07:13:34] 2025-10-06 05:12:49,030 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 07:13:34] 2025-10-06 05:12:49,030 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 07:13:34] 2025-10-06 05:12:49,033 | INFO     | did not find any defunct processes belonging to 15714
[2025-10-06 07:13:34] 2025-10-06 05:12:49,036 | INFO     | did not find any defunct processes belonging to 15714
[2025-10-06 07:13:34] 2025-10-06 05:12:49,041 | INFO     | ready for new job
[2025-10-06 07:13:34] 2025-10-06 05:12:49,041 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 07:13:34] 2025-10-06 05:12:49,043 | INFO     | ***************************************
[2025-10-06 07:13:34] 2025-10-06 05:12:49,043 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 07:13:34] 2025-10-06 05:12:49,043 | INFO     | ***************************************
[2025-10-06 07:13:34] 2025-10-06 05:12:49,043 | INFO     | 
[2025-10-06 07:13:34] 2025-10-06 05:12:49,044 | INFO     | pilot is running in a VM
[2025-10-06 07:13:34] 2025-10-06 05:12:49,044 | INFO     | architecture information:
[2025-10-06 07:13:34] 2025-10-06 05:12:49,053 | INFO     | executing command: cat /etc/os-release
[2025-10-06 07:13:34] 2025-10-06 05:12:49,170 | INFO     | cat /etc/os-release:
[2025-10-06 07:13:34] NAME="CentOS Linux"
[2025-10-06 07:13:34] VERSION="7 (Core)"
[2025-10-06 07:13:34] ID="centos"
[2025-10-06 07:13:34] ID_LIKE="rhel fedora"
[2025-10-06 07:13:34] VERSION_ID="7"
[2025-10-06 07:13:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 07:13:34] ANSI_COLOR="0;31"
[2025-10-06 07:13:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 07:13:34] HOME_URL="https://www.centos.org/"
[2025-10-06 07:13:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 07:13:34] 
[2025-10-06 07:13:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 07:13:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 07:13:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 07:13:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 07:13:34] 
[2025-10-06 07:13:34] 2025-10-06 05:12:49,170 | INFO     | ***************************************
[2025-10-06 07:13:34] 2025-10-06 05:12:49,674 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-10-06 07:13:34] 2025-10-06 05:12:49,875 | INFO     | sufficient remaining disk space (492226740224 B)
[2025-10-06 07:13:34] 2025-10-06 05:12:49,875 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 07:13:34] 2025-10-06 05:12:49,875 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 07:13:34] 2025-10-06 05:12:49,876 | INFO     | update_server=False
[2025-10-06 07:13:34] 2025-10-06 05:12:49,876 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 07:13:34] 2025-10-06 05:12:49,876 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 07:13:34] 2025-10-06 05:12:49,905 | INFO     | all payload control threads have been joined
[2025-10-06 07:13:34] 2025-10-06 05:12:50,113 | INFO     | all data control threads have been joined
[2025-10-06 07:13:34] 2025-10-06 05:12:50,210 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 07:13:34] 2025-10-06 05:12:50,211 | INFO     | aborting loop
[2025-10-06 07:13:34] 2025-10-06 05:12:50,747 | INFO     | all job control threads have been joined
[2025-10-06 07:13:34] 2025-10-06 05:12:50,881 | INFO     | [job] retrieve thread has finished
[2025-10-06 07:13:34] 2025-10-06 05:12:50,901 | INFO     | [data] copytool_in thread has finished
[2025-10-06 07:13:34] 2025-10-06 05:12:50,911 | INFO     | [payload] control thread has finished
[2025-10-06 07:13:34] 2025-10-06 05:12:51,096 | INFO     | [job] validate thread has finished
[2025-10-06 07:13:34] 2025-10-06 05:12:51,120 | INFO     | [data] control thread has finished
[2025-10-06 07:13:34] 2025-10-06 05:12:51,217 | INFO     | [job] job monitor thread has finished
[2025-10-06 07:13:34] 2025-10-06 05:12:51,301 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 07:13:34] 2025-10-06 05:12:51,522 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 07:13:34] 2025-10-06 05:12:51,754 | INFO     | [job] control thread has finished
[2025-10-06 07:13:34] 2025-10-06 05:12:51,775 | INFO     | [payload] failed_post thread has finished
[2025-10-06 07:13:34] 2025-10-06 05:12:51,881 | INFO     | [data] copytool_out thread has finished
[2025-10-06 07:13:34] 2025-10-06 05:12:52,000 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 07:13:34] 2025-10-06 05:12:52,165 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 07:13:34] 2025-10-06 05:12:52,247 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 07:13:34] 2025-10-06 05:12:52,313 | INFO     | [payload] validate_post thread has finished
[2025-10-06 07:13:34] 2025-10-06 05:12:53,170 | INFO     | [job] queue monitor thread has finished
[2025-10-06 07:13:34] 2025-10-06 05:12:53,333 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 07:13:34] 2025-10-06 05:12:57,340 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 07:13:34] 2025-10-06 05:13:19,812 | INFO     | PID=9182 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-06 07:13:34] 2025-10-06 05:13:19,813 | INFO     | .. there are 9 such processes running
[2025-10-06 07:13:34] 2025-10-06 05:13:19,814 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 07:13:34] 2025-10-06 05:13:19,814 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 07:13:34] 2025-10-06 05:13:19,814 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 07:13:34] 2025-10-06 05:13:25,992 | INFO     | [monitor] cgroup control has ended
[2025-10-06 07:13:34] 2025-10-06 05:13:26,680 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139775213303616)>', '<ExcThread(monitor, started 139774912345856)>']
[2025-10-06 07:13:34] 2025-10-06 05:13:26,855 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 07:13:34] 2025-10-06 05:13:26,856 | INFO     | [monitor] control thread has ended
[2025-10-06 07:13:34] 2025-10-06 05:13:31,709 | INFO     | all workflow threads have been joined
[2025-10-06 07:13:34] 2025-10-06 05:13:31,710 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 07:13:34] 2025-10-06 05:13:31,710 | INFO     | traces error code: 0
[2025-10-06 07:13:34] 2025-10-06 05:13:31,710 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 07:13:34] 2025-10-06 05:13:32,212 [wrapper] ==== pilot stdout END ====
[2025-10-06 07:13:34] 2025-10-06 05:13:32,306 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 07:13:34] 2025-10-06 05:13:32,368 [wrapper] pilotpid: 9182
[2025-10-06 07:13:34] 2025-10-06 05:13:32,407 [wrapper] Pilot exit status: 0
[2025-10-06 07:13:34] 2025-10-06 05:13:32,616 [wrapper] pandaids: 6827428883
[2025-10-06 07:13:34] 2025-10-06 05:13:33,240 [wrapper] cleanup supervisor_pilot  7313 9183
[2025-10-06 07:13:34] 2025-10-06 05:13:33,265 [wrapper] Test setup, not cleaning
[2025-10-06 07:13:34] 2025-10-06 05:13:33,275 [wrapper] apfmon messages muted
[2025-10-06 07:13:34] 2025-10-06 05:13:33,286 [wrapper] ==== wrapper stdout END ====
[2025-10-06 07:13:34] 2025-10-06 05:13:33,304 [wrapper] ==== wrapper stderr END ====
[2025-10-06 07:13:34]  *** Error codes and diagnostics ***
[2025-10-06 07:13:34]     "exeErrorCode": 0,
[2025-10-06 07:13:34]     "exeErrorDiag": "",
[2025-10-06 07:13:34]     "pilotErrorCode": 0,
[2025-10-06 07:13:34]     "pilotErrorDiag": "",
[2025-10-06 07:13:34]  *** Listing of results directory ***
[2025-10-06 07:13:34] total 387084
[2025-10-06 07:13:34] -rw-r--r--. 1 boinc boinc    552446 Oct  2 22:39 pilot3.tar.gz
[2025-10-06 07:13:34] -rw-r--r--. 1 boinc boinc      5112 Oct  2 23:22 queuedata.json
[2025-10-06 07:13:34] -rwx------. 1 boinc boinc     36292 Oct  2 23:23 runpilot2-wrapper.sh
[2025-10-06 07:13:34] -rw-r--r--. 1 boinc boinc       100 Oct  6 03:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 07:13:34] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 03:26 run_atlas
[2025-10-06 07:13:34] -rw-r--r--. 1 boinc boinc       105 Oct  6 03:26 job.xml
[2025-10-06 07:13:34] -rw-r--r--. 1 boinc boinc      6389 Oct  6 03:26 init_data.xml
[2025-10-06 07:13:34] -rw-r--r--. 2 boinc boinc 215778708 Oct  6 03:26 EVNT.46376901._000969.pool.root.1
[2025-10-06 07:13:34] -rw-r--r--. 2 boinc boinc     15120 Oct  6 03:26 start_atlas.sh
[2025-10-06 07:13:34] drwxrwx--x. 2 boinc boinc        68 Oct  6 03:26 shared
[2025-10-06 07:13:34] -rw-r--r--. 2 boinc boinc    565600 Oct  6 03:26 input.tar.gz
[2025-10-06 07:13:34] -rw-r--r--. 1 boinc boinc         0 Oct  6 03:26 boinc_lockfile
[2025-10-06 07:13:34] -rw-r--r--. 1 boinc boinc      2518 Oct  6 03:27 pandaJob.out
[2025-10-06 07:13:34] -rw-------. 1 boinc boinc    974160 Oct  6 03:30 agis_schedconf.cvmfs.json
[2025-10-06 07:13:34] drwx------. 4 boinc boinc      4096 Oct  6 03:31 pilot3
[2025-10-06 07:13:34] -rw-------. 1 boinc boinc 172258571 Oct  6 07:10 HITS.46376905._030075.pool.root.1
[2025-10-06 07:13:34] -rw-r--r--. 1 boinc boinc       531 Oct  6 07:10 boinc_task_state.xml
[2025-10-06 07:13:34] -rw-------. 1 boinc boinc      1015 Oct  6 07:11 memory_monitor_summary.json
[2025-10-06 07:13:34] -rw-------. 1 boinc boinc   1560401 Oct  6 07:11 agis_ddmendpoints.agis.ALL.json
[2025-10-06 07:13:34] -rw-------. 1 boinc boinc    455021 Oct  6 07:11 log.46376905._030075.job.log.tgz.1
[2025-10-06 07:13:34] -rw-------. 1 boinc boinc      7781 Oct  6 07:12 heartbeat.json
[2025-10-06 07:13:34] -rw-r--r--. 1 boinc boinc      8192 Oct  6 07:13 boinc_mmap_file
[2025-10-06 07:13:34] -rw-r--r--. 1 boinc boinc        28 Oct  6 07:13 wrapper_checkpoint.txt
[2025-10-06 07:13:34] -rw-------. 1 boinc boinc        95 Oct  6 07:13 pilot_heartbeat.json
[2025-10-06 07:13:34] -rw-------. 1 boinc boinc      4883 Oct  6 07:13 pilotlog.txt
[2025-10-06 07:13:34] -rw-------. 1 boinc boinc   1777146 Oct  6 07:13 log.46376905._030075.job.log.1
[2025-10-06 07:13:34] -rw-------. 1 boinc boinc       357 Oct  6 07:13 output.list
[2025-10-06 07:13:34] -rw-r--r--. 1 boinc boinc       620 Oct  6 07:13 runtime_log
[2025-10-06 07:13:34] -rw-------. 1 boinc boinc   2252800 Oct  6 07:13 result.tar.gz
[2025-10-06 07:13:34] -rw-r--r--. 1 boinc boinc      8703 Oct  6 07:13 runtime_log.err
[2025-10-06 07:13:34] -rw-------. 1 boinc boinc       656 Oct  6 07:13 3zpNDmPxfO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZfFNDmD1kscn.diag
[2025-10-06 07:13:34] -rw-r--r--. 1 boinc boinc     20601 Oct  6 07:13 stderr.txt
[2025-10-06 07:13:34] HITS file was successfully produced:
[2025-10-06 07:13:34] -rw-------. 1 boinc boinc 172258571 Oct  6 07:10 shared/HITS.pool.root.1
[2025-10-06 07:13:34]  *** Contents of shared directory: ***
[2025-10-06 07:13:34] total 381720
[2025-10-06 07:13:34] -rw-r--r--. 2 boinc boinc 215778708 Oct  6 03:26 ATLAS.root_0
[2025-10-06 07:13:34] -rw-r--r--. 2 boinc boinc     15120 Oct  6 03:26 start_atlas.sh
[2025-10-06 07:13:34] -rw-r--r--. 2 boinc boinc    565600 Oct  6 03:26 input.tar.gz
[2025-10-06 07:13:34] -rw-------. 1 boinc boinc 172258571 Oct  6 07:10 HITS.pool.root.1
[2025-10-06 07:13:34] -rw-------. 1 boinc boinc   2252800 Oct  6 07:13 result.tar.gz
07:13:35 (5375): run_atlas exited; CPU time 43742.240327
07:13:35 (5375): called boinc_finish(0)

</stderr_txt>
]]>

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