Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-07 09:59:27 (2708): vboxwrapper version 26210
2025-10-07 09:59:27 (2708): BOINC client version: 8.2.4
2025-10-07 09:59:28 (2708): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-10-07 09:59:28 (2708): Successfully copied 'init_data.xml' to the shared directory.
2025-10-07 09:59:28 (2708): Create VM. (boinc_34e67ef295df4f92, slot#0)
2025-10-07 09:59:29 (2708): Setting Memory Size for VM. (4200MB)
2025-10-07 09:59:33 (2708): Setting CPU Count for VM. (2)
2025-10-07 09:59:35 (2708): Setting Chipset Options for VM.
2025-10-07 09:59:35 (2708): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-07 09:59:36 (2708): Setting Boot Options for VM.
2025-10-07 09:59:37 (2708): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-07 09:59:37 (2708): Enabling VM Network Access.
2025-10-07 09:59:37 (2708): Disabling USB Support for VM.
2025-10-07 09:59:38 (2708): Disabling COM Port Support for VM.
2025-10-07 09:59:38 (2708): Disabling LPT Port Support for VM.
2025-10-07 09:59:40 (2708): Disabling Audio Support for VM.
2025-10-07 09:59:40 (2708): Disabling Clipboard Support for VM.
2025-10-07 09:59:40 (2708): Disabling Drag and Drop Support for VM.
2025-10-07 09:59:40 (2708): Adding storage controller(s) to VM.
2025-10-07 09:59:41 (2708): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-07 09:59:43 (2708): Adding VirtualBox Guest Additions to VM.
2025-10-07 09:59:43 (2708): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-07 09:59:43 (2708): forwarding host port 55209 to guest port 80
2025-10-07 09:59:44 (2708): Enabling remote desktop for VM.
2025-10-07 09:59:44 (2708): Enabling shared directory for VM.
2025-10-07 09:59:45 (2708): Starting VM using VBoxManage interface. (boinc_34e67ef295df4f92, slot#0)
2025-10-07 09:59:52 (2708): Successfully started VM. (PID = '1988')
2025-10-07 09:59:52 (2708): Reporting VM Process ID to BOINC.
2025-10-07 09:59:52 (2708): Guest Log: BIOS: VirtualBox 7.1.6
2025-10-07 09:59:52 (2708): Guest Log: CPUID EDX: 0x178bfbff
2025-10-07 09:59:52 (2708): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-07 09:59:52 (2708): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-07 09:59:52 (2708): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-07 09:59:52 (2708): Detected: Web Application Enabled (http://localhost:55209)
2025-10-07 09:59:52 (2708): Detected: Remote Desktop Enabled (localhost:55210)
2025-10-07 09:59:52 (2708): Preference change detected
2025-10-07 09:59:52 (2708): Setting CPU throttle for VM. (100%)
2025-10-07 09:59:52 (2708): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-07 09:59:54 (2708): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-07 09:59:54 (2708): Guest Log: BIOS: Booting from Hard Disk...
2025-10-07 09:59:57 (2708): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-07 09:59:57 (2708): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-07 09:59:57 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-07 10:00:05 (2708): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-07 10:00:05 (2708): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-07 10:00:18 (2708): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-07 10:00:18 (2708): Guest Log: 00:00:00.000309 main     Log opened 2025-10-07T10:00:15.452511000Z
2025-10-07 10:00:18 (2708): Guest Log: 00:00:00.000442 main     OS Product: Linux
2025-10-07 10:00:18 (2708): Guest Log: 00:00:00.000493 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-07 10:00:18 (2708): Guest Log: 00:00:00.000537 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-07 10:00:18 (2708): Guest Log: 00:00:00.000581 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-07 10:00:18 (2708): Guest Log: 00:00:00.000583 main     Process ID: 1275
2025-10-07 10:00:18 (2708): Guest Log: 00:00:00.000584 main     Package type: LINUX_64BITS_GENERIC
2025-10-07 10:00:18 (2708): Guest Log: 00:00:00.001712 main     5.2.32 r132073 started. Verbose level = 0
2025-10-07 10:00:18 (2708): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-07 10:00:18 (2708): Guest Log: [INFO] Mounting shared directory
2025-10-07 10:00:18 (2708): Guest Log: [INFO] Checking for init_data.xml
2025-10-07 10:00:22 (2708): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-07 10:00:22 (2708): Guest Log: [INFO] Detected branch: prod
2025-10-07 10:00:23 (2708): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-07 10:00:23 (2708): Guest Log: Copying input files
2025-10-07 10:00:24 (2708): Guest Log: Copied input files into RunAtlas.
2025-10-07 10:00:24 (2708): Guest Log: Detected user-configured HTTP proxy at http://192.168.35.184:3128 - will set in /etc/cvmfs/default.local
2025-10-07 10:00:28 (2708): Guest Log: 00:00:10.037948 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 940 788 000ns (GuestNow=1 759 824 027 517 178 000 ns GuestLast=1 759 831 215 457 966 000 ns fSetTimeLastLoop=true )
2025-10-07 10:00:34 (2708): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-07 10:00:34 (2708): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-07 10:00:34 (2708): Guest Log: 2.6.3.0 1549 0 31548 151429 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
2025-10-07 10:00:40 (2708): Guest Log: copied the webapp to /var/www
2025-10-07 10:00:40 (2708): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-07 10:00:40 (2708): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-07 10:00:40 (2708): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-07 10:00:40 (2708): Guest Log:  *** Starting ATLAS job. (PandaID=6827432541 taskID=46376905) ***
2025-10-07 11:39:54 (2708): Status Report: Elapsed Time: '6000.000000'
2025-10-07 11:39:54 (2708): Status Report: CPU Time: '10797.250000'
2025-10-07 13:19:56 (2708): Status Report: Elapsed Time: '12000.000000'
2025-10-07 13:19:56 (2708): Status Report: CPU Time: '22368.468750'
2025-10-07 14:59:59 (2708): Status Report: Elapsed Time: '18000.000000'
2025-10-07 14:59:59 (2708): Status Report: CPU Time: '33657.312500'
2025-10-07 16:40:01 (2708): Status Report: Elapsed Time: '24000.000000'
2025-10-07 16:40:01 (2708): Status Report: CPU Time: '45099.703125'
2025-10-07 18:20:04 (2708): Status Report: Elapsed Time: '30000.000000'
2025-10-07 18:20:04 (2708): Status Report: CPU Time: '56604.875000'
2025-10-07 20:00:09 (2708): Status Report: Elapsed Time: '36000.000000'
2025-10-07 20:00:09 (2708): Status Report: CPU Time: '68166.078125'
2025-10-07 20:09:04 (2708): Guest Log:  *** Job finished ***
2025-10-07 20:09:04 (2708): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:08:41,478 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:08:41,479 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:08:55,856 | INFO     | [monitor] cgroup control has ended
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:08:57,714 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139627684505408)>', '<ExcThread(monitor, started 139627054733056)>']
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:08:58,595 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:08:58,595 | INFO     | [monitor] control thread has ended
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:09:02,721 | INFO     | all workflow threads have been joined
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:09:02,721 | INFO     | end of generic workflow (traces error code: 0)
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:09:02,721 | INFO     | traces error code: 0
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:09:02,722 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:09:02,845 [wrapper] ==== pilot stdout END ====
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:09:02,850 [wrapper] ==== wrapper stdout RESUME ====
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:09:02,856 [wrapper] pilotpid: 5935
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:09:02,861 [wrapper] Pilot exit status: 0
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:09:03,091 [wrapper] pandaids: 6827432541
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:09:03,142 [wrapper] cleanup supervisor_pilot 15325 5936
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:09:03,149 [wrapper] Test setup, not cleaning
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:09:03,155 [wrapper] apfmon messages muted
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:09:03,160 [wrapper] ==== wrapper stdout END ====
2025-10-07 20:09:04 (2708): Guest Log: 2025-10-07 18:09:03,165 [wrapper] ==== wrapper stderr END ====
2025-10-07 20:09:04 (2708): Guest Log:  *** Error codes and diagnostics ***
2025-10-07 20:09:04 (2708): Guest Log:     "exeErrorCode": 0,
2025-10-07 20:09:04 (2708): Guest Log:     "exeErrorDiag": "",
2025-10-07 20:09:04 (2708): Guest Log:     "pilotErrorCode": 0,
2025-10-07 20:09:04 (2708): Guest Log:     "pilotErrorDiag": "",
2025-10-07 20:09:04 (2708): Guest Log:  *** Listing of results directory ***
2025-10-07 20:09:04 (2708): Guest Log: total 191616
2025-10-07 20:09:04 (2708): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  2 22:43 pilot3.tar.gz
2025-10-07 20:09:04 (2708): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  2 22:44 runpilot2-wrapper.sh
2025-10-07 20:09:04 (2708): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  2 22:44 queuedata.json
2025-10-07 20:09:04 (2708): Guest Log: -rwxr-xr-x. 1 atlas atlas      8394 Oct  7 08:00 init_data.xml
2025-10-07 20:09:04 (2708): Guest Log: -rwxr-xr-x. 1 atlas atlas    565598 Oct  7 08:00 input.tar.gz
2025-10-07 20:09:04 (2708): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct  7 08:00 start_atlas.sh
2025-10-07 20:09:04 (2708): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  7 08:00 EVNT.46376901._001017.pool.root.1 -> /data/./ATLAS.root_0
2025-10-07 20:09:04 (2708): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Oct  7 08:00 pandaJob.out
2025-10-07 20:09:04 (2708): Guest Log: -rw-------. 1 atlas atlas    974976 Oct  7 08:01 agis_schedconf.cvmfs.json
2025-10-07 20:09:04 (2708): Guest Log: drwx------. 4 atlas atlas      4096 Oct  7 08:01 pilot3
2025-10-07 20:09:04 (2708): Guest Log: -rw-------. 1 atlas atlas 181315851 Oct  7 18:06 HITS.46376905._031275.pool.root.1
2025-10-07 20:09:04 (2708): Guest Log: -rw-------. 1 atlas atlas      1040 Oct  7 18:07 memory_monitor_summary.json
2025-10-07 20:09:04 (2708): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  7 18:07 agis_ddmendpoints.agis.ALL.json
2025-10-07 20:09:04 (2708): Guest Log: -rw-------. 1 atlas atlas    674904 Oct  7 18:07 log.46376905._031275.job.log.tgz.1
2025-10-07 20:09:04 (2708): Guest Log: -rw-------. 1 atlas atlas        95 Oct  7 18:07 pilot_heartbeat.json
2025-10-07 20:09:04 (2708): Guest Log: -rw-------. 1 atlas atlas      7788 Oct  7 18:08 heartbeat.json
2025-10-07 20:09:04 (2708): Guest Log: -rw-------. 1 atlas atlas      4805 Oct  7 18:09 pilotlog.txt
2025-10-07 20:09:04 (2708): Guest Log: -rw-------. 1 atlas atlas   4861218 Oct  7 18:09 log.46376905._031275.job.log.1
2025-10-07 20:09:04 (2708): Guest Log: -rw-------. 1 atlas atlas       357 Oct  7 18:09 output.list
2025-10-07 20:09:04 (2708): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  7 18:09 runtime_log
2025-10-07 20:09:04 (2708): Guest Log: -rw-------. 1 atlas atlas   5560320 Oct  7 18:09 result.tar.gz
2025-10-07 20:09:04 (2708): Guest Log: -rw-r--r--. 1 atlas atlas      8645 Oct  7 18:09 runtime_log.err
2025-10-07 20:09:04 (2708): Guest Log: -rw-------. 1 atlas atlas       664 Oct  7 18:09 dIfKDm8ChO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmksFNDmooGNnn.diag
2025-10-07 20:09:04 (2708): Guest Log: Looking for outputfile HITS.46376905._031275.pool.root.1
2025-10-07 20:09:04 (2708): Guest Log: HITS file was successfully produced
2025-10-07 20:09:04 (2708): Guest Log: -rw-------. 1 atlas atlas 181315851 Oct  7 18:06 /home/atlas/RunAtlas/HITS.46376905._031275.pool.root.1
2025-10-07 20:09:06 (2708): Guest Log: Successfully finished the ATLAS job!
2025-10-07 20:09:06 (2708): Guest Log: Copying the results back to the shared directory!
2025-10-07 20:09:06 (2708): Guest Log:  *** Contents of shared directory: ***
2025-10-07 20:09:06 (2708): Guest Log: total 392776
2025-10-07 20:09:06 (2708): Guest Log: -rwxrwxrwx. 1 root root 214723301 Oct  7 07:59 ATLAS.root_0
2025-10-07 20:09:06 (2708): Guest Log: -rwxrwxrwx. 1 root root 181315851 Oct  7  2025 HITS.pool.root.1
2025-10-07 20:09:06 (2708): Guest Log: -rwxrwxrwx. 1 root root      8394 Oct  7 07:59 init_data.xml
2025-10-07 20:09:06 (2708): Guest Log: -rwxrwxrwx. 1 root root    565598 Oct  3 02:48 input.tar.gz
2025-10-07 20:09:06 (2708): Guest Log: -rwxrwxrwx. 1 root root   5560320 Oct  7  2025 result.tar.gz
2025-10-07 20:09:06 (2708): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  3 02:48 start_atlas.sh
2025-10-07 20:09:06 (2708): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-07 20:09:06 (2708): VM Completion File Detected.
2025-10-07 20:09:06 (2708): Powering off VM.
2025-10-07 20:09:07 (2708): Successfully stopped VM.
2025-10-07 20:09:07 (2708): Deregistering VM. (boinc_34e67ef295df4f92, slot#0)
2025-10-07 20:09:07 (2708): Removing network bandwidth throttle group from VM.
2025-10-07 20:09:07 (2708): Removing VM from VirtualBox.
2025-10-07 20:09:12 (2708): called boinc_finish(0)

</stderr_txt>
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