Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-06 23:36:34 (6252): vboxwrapper version 26210
2025-10-06 23:36:34 (6252): BOINC client version: 8.2.4
2025-10-06 23:36:34 (6252): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-10-06 23:36:35 (6252): Successfully copied 'init_data.xml' to the shared directory.
2025-10-06 23:36:35 (6252): Create VM. (boinc_5281d232308fc4d4, slot#0)
2025-10-06 23:36:35 (6252): Setting Memory Size for VM. (4200MB)
2025-10-06 23:36:36 (6252): Setting CPU Count for VM. (2)
2025-10-06 23:36:36 (6252): Setting Chipset Options for VM.
2025-10-06 23:36:36 (6252): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-06 23:36:36 (6252): Setting Boot Options for VM.
2025-10-06 23:36:37 (6252): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-06 23:36:37 (6252): Enabling VM Network Access.
2025-10-06 23:36:37 (6252): Disabling USB Support for VM.
2025-10-06 23:36:38 (6252): Disabling COM Port Support for VM.
2025-10-06 23:36:38 (6252): Disabling LPT Port Support for VM.
2025-10-06 23:36:38 (6252): Disabling Audio Support for VM.
2025-10-06 23:36:38 (6252): Disabling Clipboard Support for VM.
2025-10-06 23:36:39 (6252): Disabling Drag and Drop Support for VM.
2025-10-06 23:36:39 (6252): Adding storage controller(s) to VM.
2025-10-06 23:36:39 (6252): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-06 23:36:41 (6252): Adding VirtualBox Guest Additions to VM.
2025-10-06 23:36:41 (6252): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-06 23:36:42 (6252): forwarding host port 53695 to guest port 80
2025-10-06 23:36:42 (6252): Enabling remote desktop for VM.
2025-10-06 23:36:42 (6252): Enabling shared directory for VM.
2025-10-06 23:36:43 (6252): Starting VM using VBoxManage interface. (boinc_5281d232308fc4d4, slot#0)
2025-10-06 23:36:50 (6252): Successfully started VM. (PID = '9012')
2025-10-06 23:36:50 (6252): Reporting VM Process ID to BOINC.
2025-10-06 23:36:50 (6252): Guest Log: BIOS: VirtualBox 7.1.6
2025-10-06 23:36:50 (6252): Guest Log: CPUID EDX: 0x178bfbff
2025-10-06 23:36:50 (6252): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-06 23:36:50 (6252): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-06 23:36:50 (6252): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-06 23:36:50 (6252): Detected: Web Application Enabled (http://localhost:53695)
2025-10-06 23:36:50 (6252): Detected: Remote Desktop Enabled (localhost:53696)
2025-10-06 23:36:50 (6252): Preference change detected
2025-10-06 23:36:50 (6252): Setting CPU throttle for VM. (100%)
2025-10-06 23:36:50 (6252): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-06 23:36:52 (6252): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-06 23:36:52 (6252): Guest Log: BIOS: Booting from Hard Disk...
2025-10-06 23:36:55 (6252): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-06 23:36:55 (6252): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-06 23:36:55 (6252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-06 23:37:03 (6252): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-06 23:37:03 (6252): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-06 23:37:15 (6252): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-06 23:37:15 (6252): Guest Log: 00:00:00.000231 main     Log opened 2025-10-06T23:37:13.407970000Z
2025-10-06 23:37:15 (6252): Guest Log: 00:00:00.000398 main     OS Product: Linux
2025-10-06 23:37:15 (6252): Guest Log: 00:00:00.000448 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-06 23:37:15 (6252): Guest Log: 00:00:00.000493 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-06 23:37:15 (6252): Guest Log: 00:00:00.000537 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-06 23:37:15 (6252): Guest Log: 00:00:00.000539 main     Process ID: 1276
2025-10-06 23:37:15 (6252): Guest Log: 00:00:00.000540 main     Package type: LINUX_64BITS_GENERIC
2025-10-06 23:37:15 (6252): Guest Log: 00:00:00.002271 main     5.2.32 r132073 started. Verbose level = 0
2025-10-06 23:37:15 (6252): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-06 23:37:15 (6252): Guest Log: [INFO] Mounting shared directory
2025-10-06 23:37:15 (6252): Guest Log: [INFO] Checking for init_data.xml
2025-10-06 23:37:25 (6252): Guest Log: 00:00:10.005607 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 926 643 000ns (GuestNow=1 759 786 644 485 828 000 ns GuestLast=1 759 793 833 412 471 000 ns fSetTimeLastLoop=true )
2025-10-06 23:37:38 (6252): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-06 23:37:38 (6252): Guest Log: [INFO] Detected branch: prod
2025-10-06 23:37:38 (6252): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-06 23:37:38 (6252): Guest Log: Copying input files
2025-10-06 23:37:40 (6252): Guest Log: Copied input files into RunAtlas.
2025-10-06 23:37:40 (6252): Guest Log: Detected user-configured HTTP proxy at http://192.168.35.184:3128 - will set in /etc/cvmfs/default.local
2025-10-06 23:37:49 (6252): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-06 23:37:49 (6252): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-06 23:37:49 (6252): Guest Log: 2.6.3.0 1556 0 29532 151412 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
2025-10-06 23:37:50 (6252): Guest Log: copied the webapp to /var/www
2025-10-06 23:37:50 (6252): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-06 23:37:50 (6252): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-06 23:37:50 (6252): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-06 23:37:50 (6252): Guest Log:  *** Starting ATLAS job. (PandaID=6826883392 taskID=46376905) ***
2025-10-07 01:16:52 (6252): Status Report: Elapsed Time: '6000.000000'
2025-10-07 01:16:52 (6252): Status Report: CPU Time: '10636.468750'
2025-10-07 02:56:54 (6252): Status Report: Elapsed Time: '12000.000000'
2025-10-07 02:56:54 (6252): Status Report: CPU Time: '22151.468750'
2025-10-07 04:36:57 (6252): Status Report: Elapsed Time: '18000.000000'
2025-10-07 04:36:57 (6252): Status Report: CPU Time: '33579.984375'
2025-10-07 06:17:00 (6252): Status Report: Elapsed Time: '24000.000000'
2025-10-07 06:17:00 (6252): Status Report: CPU Time: '44956.796875'
2025-10-07 07:57:04 (6252): Status Report: Elapsed Time: '30000.000000'
2025-10-07 07:57:04 (6252): Status Report: CPU Time: '56156.531250'
2025-10-07 09:37:07 (6252): Status Report: Elapsed Time: '36000.000000'
2025-10-07 09:37:07 (6252): Status Report: CPU Time: '67687.031250'
2025-10-07 09:59:15 (6252): Guest Log:  *** Job finished ***
2025-10-07 09:59:15 (6252): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:06,299 | INFO     | found 0 job(s) in 20 queues
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:06,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:06,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:06,648 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140527057049408)>', '<ExcThread(monitor, started 140526598731520)>']
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:07,301 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:07,302 | INFO     | [monitor] control thread has ended
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:11,654 | INFO     | all workflow threads have been joined
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:11,654 | INFO     | end of generic workflow (traces error code: 0)
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:11,655 | INFO     | traces error code: 0
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:11,655 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:11,804 [wrapper] ==== pilot stdout END ====
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:11,811 [wrapper] ==== wrapper stdout RESUME ====
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:11,818 [wrapper] pilotpid: 5927
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:11,825 [wrapper] Pilot exit status: 0
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:11,886 [wrapper] pandaids: 6826883392
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:11,938 [wrapper] cleanup supervisor_pilot 17996 5928
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:11,944 [wrapper] Test setup, not cleaning
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:11,951 [wrapper] apfmon messages muted
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:11,960 [wrapper] ==== wrapper stdout END ====
2025-10-07 09:59:15 (6252): Guest Log: 2025-10-07 07:59:11,966 [wrapper] ==== wrapper stderr END ====
2025-10-07 09:59:15 (6252): Guest Log:  *** Error codes and diagnostics ***
2025-10-07 09:59:15 (6252): Guest Log:     "exeErrorCode": 0,
2025-10-07 09:59:15 (6252): Guest Log:     "exeErrorDiag": "",
2025-10-07 09:59:15 (6252): Guest Log:     "pilotErrorCode": 0,
2025-10-07 09:59:15 (6252): Guest Log:     "pilotErrorDiag": "",
2025-10-07 09:59:15 (6252): Guest Log:  *** Listing of results directory ***
2025-10-07 09:59:15 (6252): Guest Log: total 193484
2025-10-07 09:59:15 (6252): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  2 04:12 pilot3.tar.gz
2025-10-07 09:59:15 (6252): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  2 04:38 runpilot2-wrapper.sh
2025-10-07 09:59:15 (6252): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  2 04:38 queuedata.json
2025-10-07 09:59:15 (6252): Guest Log: -rwxr-xr-x. 1 atlas atlas      8394 Oct  6 21:37 init_data.xml
2025-10-07 09:59:15 (6252): Guest Log: -rwxr-xr-x. 1 atlas atlas    565600 Oct  6 21:37 input.tar.gz
2025-10-07 09:59:15 (6252): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct  6 21:37 start_atlas.sh
2025-10-07 09:59:15 (6252): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  6 21:37 EVNT.46376901._000651.pool.root.1 -> /data/./ATLAS.root_0
2025-10-07 09:59:15 (6252): Guest Log: -rw-r--r--. 1 atlas atlas      2518 Oct  6 21:37 pandaJob.out
2025-10-07 09:59:15 (6252): Guest Log: -rw-------. 1 atlas atlas    975020 Oct  6 21:38 agis_schedconf.cvmfs.json
2025-10-07 09:59:15 (6252): Guest Log: drwx------. 4 atlas atlas      4096 Oct  6 21:38 pilot3
2025-10-07 09:59:15 (6252): Guest Log: -rw-------. 1 atlas atlas 183085070 Oct  7 07:57 HITS.46376905._022475.pool.root.1
2025-10-07 09:59:15 (6252): Guest Log: -rw-------. 1 atlas atlas      1027 Oct  7 07:58 memory_monitor_summary.json
2025-10-07 09:59:15 (6252): Guest Log: -rw-------. 1 atlas atlas        95 Oct  7 07:58 pilot_heartbeat.json
2025-10-07 09:59:15 (6252): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  7 07:58 agis_ddmendpoints.agis.ALL.json
2025-10-07 09:59:15 (6252): Guest Log: -rw-------. 1 atlas atlas    665472 Oct  7 07:58 log.46376905._022475.job.log.tgz.1
2025-10-07 09:59:15 (6252): Guest Log: -rw-------. 1 atlas atlas      7781 Oct  7 07:58 heartbeat.json
2025-10-07 09:59:15 (6252): Guest Log: -rw-------. 1 atlas atlas      4877 Oct  7 07:59 pilotlog.txt
2025-10-07 09:59:15 (6252): Guest Log: -rw-------. 1 atlas atlas   4947645 Oct  7 07:59 log.46376905._022475.job.log.1
2025-10-07 09:59:15 (6252): Guest Log: -rw-------. 1 atlas atlas       357 Oct  7 07:59 output.list
2025-10-07 09:59:15 (6252): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  7 07:59 runtime_log
2025-10-07 09:59:15 (6252): Guest Log: -rw-------. 1 atlas atlas   5632000 Oct  7 07:59 result.tar.gz
2025-10-07 09:59:15 (6252): Guest Log: -rw-r--r--. 1 atlas atlas      8645 Oct  7 07:59 runtime_log.err
2025-10-07 09:59:15 (6252): Guest Log: -rw-------. 1 atlas atlas       664 Oct  7 07:59 eysKDmnGQO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmntDNDmvJYDrn.diag
2025-10-07 09:59:15 (6252): Guest Log: Looking for outputfile HITS.46376905._022475.pool.root.1
2025-10-07 09:59:15 (6252): Guest Log: HITS file was successfully produced
2025-10-07 09:59:15 (6252): Guest Log: -rw-------. 1 atlas atlas 183085070 Oct  7 07:57 /home/atlas/RunAtlas/HITS.46376905._022475.pool.root.1
2025-10-07 09:59:17 (6252): Guest Log: Successfully finished the ATLAS job!
2025-10-07 09:59:17 (6252): Guest Log: Copying the results back to the shared directory!
2025-10-07 09:59:17 (6252): Guest Log:  *** Contents of shared directory: ***
2025-10-07 09:59:17 (6252): Guest Log: total 394164
2025-10-07 09:59:17 (6252): Guest Log: -rwxrwxrwx. 1 root root 214304347 Oct  6 21:36 ATLAS.root_0
2025-10-07 09:59:17 (6252): Guest Log: -rwxrwxrwx. 1 root root 183085070 Oct  7 07:59 HITS.pool.root.1
2025-10-07 09:59:17 (6252): Guest Log: -rwxrwxrwx. 1 root root      8394 Oct  6 21:36 init_data.xml
2025-10-07 09:59:17 (6252): Guest Log: -rwxrwxrwx. 1 root root    565600 Oct  2 11:30 input.tar.gz
2025-10-07 09:59:17 (6252): Guest Log: -rwxrwxrwx. 1 root root   5632000 Oct  7 07:59 result.tar.gz
2025-10-07 09:59:17 (6252): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  2 11:30 start_atlas.sh
2025-10-07 09:59:17 (6252): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-07 09:59:17 (6252): VM Completion File Detected.
2025-10-07 09:59:17 (6252): Powering off VM.
2025-10-07 09:59:18 (6252): Successfully stopped VM.
2025-10-07 09:59:18 (6252): Deregistering VM. (boinc_5281d232308fc4d4, slot#0)
2025-10-07 09:59:18 (6252): Removing network bandwidth throttle group from VM.
2025-10-07 09:59:18 (6252): Removing VM from VirtualBox.
2025-10-07 09:59:23 (6252): called boinc_finish(0)

</stderr_txt>
]]>

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